Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052440 | XP_003589128.1 | 99.086 | 547 | 5 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1097 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052440 | sp|Q9C626|FB37_ARATH | 66.116 | 484 | 158 | 4 | 55 | 536 | 34 | 513 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052440 | Q2HTR2 | 99.086 | 547 | 5 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1097 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000910 | Msa0052440 | 0.842045 | 3.285611e-58 | -8.615850e-47 |
| Msa0010910 | Msa0052440 | 0.827886 | 1.220872e-54 | -8.615850e-47 |
| Msa0052440 | Msa0097070 | 0.868578 | 5.883109e-66 | -8.615850e-47 |
| Msa0052440 | Msa0186620 | 0.870610 | 1.281610e-66 | -8.615850e-47 |
| Msa0052440 | Msa0227330 | 0.818568 | 1.831854e-52 | -8.615850e-47 |
| Msa0052440 | Msa0237300 | 0.803084 | 4.126981e-49 | -8.615850e-47 |
| Msa0052440 | Msa0274720 | 0.802406 | 5.695047e-49 | -8.615850e-47 |
| Msa0052440 | Msa0315520 | 0.802241 | 6.158449e-49 | -8.615850e-47 |
| Msa0052440 | Msa0362890 | 0.807251 | 5.536497e-50 | -8.615850e-47 |
| Msa0052440 | Msa0390480 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0052440 | Msa0430520 | 0.808642 | 2.801707e-50 | -8.615850e-47 |
| Msa0052440 | Msa0430700 | 0.807029 | 6.172164e-50 | -8.615850e-47 |
| Msa0052440 | Msa0529670 | 0.808110 | 3.637318e-50 | -8.615850e-47 |
| Msa0052440 | Msa0534980 | 0.832447 | 9.405099e-56 | -8.615850e-47 |
| Msa0052440 | Msa0651560 | 0.805972 | 1.031212e-49 | -8.615850e-47 |
| Msa0052440 | Msa0698100 | 0.800110 | 1.680408e-48 | -8.615850e-47 |
| Msa0052440 | Msa0789560 | 0.801855 | 7.395373e-49 | -8.615850e-47 |
| Msa0052440 | Msa0985220 | 0.815341 | 9.715681e-52 | -8.615850e-47 |
| Msa0052440 | Msa1089960 | 0.832369 | 9.833479e-56 | -8.615850e-47 |
| Msa0052440 | Msa1133590 | 0.838084 | 3.547272e-57 | -8.615850e-47 |
| Msa0052440 | Msa1373850 | 0.832320 | 1.011277e-55 | -8.615850e-47 |
| Msa0052440 | Msa1391720 | 0.810656 | 1.034316e-50 | -8.615850e-47 |
| Msa0052440 | Msa1433700 | 0.845861 | 3.117569e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052440 | MtrunA17_Chr1g0152951 | 99.086 | 547 | 5 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1097 |
| Msa0052440 | MtrunA17_Chr4g0053361 | 54.268 | 492 | 219 | 3 | 52 | 538 | 34 | 524 | 0.0 | 536 |
| Msa0052440 | MtrunA17_Chr2g0286991 | 27.489 | 462 | 261 | 13 | 59 | 449 | 5 | 463 | 1.37e-29 | 123 |
| Msa0052440 | MtrunA17_Chr2g0286991 | 26.171 | 363 | 224 | 12 | 98 | 453 | 245 | 570 | 1.08e-17 | 86.7 |
| Msa0052440 | MtrunA17_Chr4g0048391 | 24.375 | 480 | 252 | 18 | 57 | 443 | 19 | 480 | 6.11e-18 | 87.0 |
| Msa0052440 | MtrunA17_Chr7g0251831 | 23.030 | 495 | 262 | 14 | 61 | 446 | 1 | 485 | 1.02e-15 | 80.1 |
| Msa0052440 | MtrunA17_Chr1g0196061 | 21.756 | 501 | 256 | 17 | 64 | 446 | 14 | 496 | 2.44e-15 | 79.0 |
| Msa0052440 | MtrunA17_Chr1g0212071 | 24.471 | 425 | 230 | 13 | 66 | 455 | 23 | 391 | 5.07e-15 | 77.4 |
| Msa0052440 | MtrunA17_Chr4g0004901 | 26.923 | 260 | 181 | 6 | 187 | 443 | 365 | 618 | 5.31e-15 | 78.2 |
| Msa0052440 | MtrunA17_Chr4g0004901 | 29.600 | 250 | 168 | 6 | 134 | 381 | 389 | 632 | 6.78e-15 | 77.8 |
| Msa0052440 | MtrunA17_Chr4g0004901 | 25.783 | 415 | 229 | 12 | 103 | 450 | 146 | 548 | 2.23e-11 | 66.6 |
| Msa0052440 | MtrunA17_Chr8g0347711 | 24.490 | 343 | 195 | 13 | 61 | 341 | 12 | 352 | 5.43e-14 | 73.9 |
| Msa0052440 | MtrunA17_Chr4g0041191 | 24.307 | 469 | 248 | 15 | 54 | 470 | 3 | 416 | 9.88e-14 | 74.3 |
| Msa0052440 | MtrunA17_Chr1g0149351 | 24.398 | 332 | 223 | 11 | 136 | 450 | 200 | 520 | 4.11e-13 | 72.0 |
| Msa0052440 | MtrunA17_Chr1g0149351 | 30.370 | 135 | 66 | 3 | 320 | 453 | 177 | 284 | 8.74e-12 | 67.8 |
| Msa0052440 | MtrunA17_Chr3g0137771 | 37.143 | 140 | 82 | 4 | 320 | 453 | 143 | 282 | 7.30e-13 | 71.2 |
| Msa0052440 | MtrunA17_Chr3g0137771 | 22.179 | 514 | 259 | 15 | 61 | 434 | 68 | 580 | 9.35e-12 | 67.8 |
| Msa0052440 | MtrunA17_Chr3g0137771 | 30.052 | 193 | 98 | 7 | 294 | 453 | 200 | 388 | 3.33e-11 | 65.9 |
| Msa0052440 | MtrunA17_Chr1g0176031 | 27.668 | 253 | 159 | 9 | 120 | 361 | 77 | 316 | 7.64e-13 | 70.1 |
| Msa0052440 | MtrunA17_Chr7g0272131 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 3.19e-12 | 69.3 |
| Msa0052440 | MtrunA17_Chr2g0333661 | 24.163 | 418 | 256 | 13 | 71 | 453 | 9 | 400 | 3.74e-11 | 65.5 |
| Msa0052440 | MtrunA17_Chr4g0000931 | 28.179 | 291 | 158 | 11 | 64 | 341 | 40 | 292 | 9.36e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052440 | AT1G47056.1 | 66.116 | 484 | 158 | 4 | 55 | 536 | 34 | 513 | 0.0 | 626 |
| Msa0052440 | AT4G07400.1 | 61.154 | 520 | 185 | 6 | 14 | 531 | 35 | 539 | 0.0 | 605 |
| Msa0052440 | AT5G67250.1 | 55.985 | 543 | 209 | 6 | 1 | 538 | 1 | 518 | 0.0 | 553 |
| Msa0052440 | AT3G50080.1 | 56.584 | 486 | 201 | 6 | 56 | 538 | 36 | 514 | 0.0 | 529 |
| Msa0052440 | AT4G15475.1 | 29.394 | 330 | 211 | 13 | 127 | 447 | 274 | 590 | 7.23e-23 | 103 |
| Msa0052440 | AT4G15475.1 | 27.696 | 408 | 243 | 12 | 51 | 453 | 3 | 363 | 3.68e-22 | 100 |
| Msa0052440 | AT2G25490.1 | 26.107 | 429 | 273 | 16 | 61 | 453 | 64 | 484 | 4.66e-17 | 85.1 |
| Msa0052440 | AT2G25490.1 | 25.000 | 360 | 203 | 9 | 134 | 432 | 212 | 565 | 3.92e-14 | 75.9 |
| Msa0052440 | AT5G27920.1 | 27.019 | 359 | 213 | 13 | 137 | 459 | 158 | 503 | 6.82e-16 | 81.3 |
| Msa0052440 | AT5G27920.1 | 26.087 | 299 | 148 | 9 | 158 | 446 | 332 | 567 | 1.61e-11 | 67.4 |
| Msa0052440 | AT1G12820.1 | 24.590 | 427 | 252 | 13 | 61 | 443 | 1 | 401 | 1.53e-14 | 77.0 |
| Msa0052440 | AT5G01720.1 | 28.516 | 256 | 165 | 6 | 134 | 382 | 338 | 582 | 5.39e-14 | 75.5 |
| Msa0052440 | AT5G01720.1 | 23.684 | 494 | 265 | 17 | 63 | 452 | 14 | 499 | 7.65e-12 | 68.6 |
| Msa0052440 | AT3G07550.3 | 25.294 | 340 | 217 | 14 | 61 | 377 | 15 | 340 | 6.76e-14 | 73.9 |
| Msa0052440 | AT5G23340.1 | 26.036 | 338 | 180 | 13 | 64 | 365 | 10 | 313 | 6.90e-14 | 74.3 |
| Msa0052440 | AT3G26810.1 | 24.940 | 417 | 261 | 16 | 61 | 443 | 1 | 399 | 1.26e-13 | 73.9 |
| Msa0052440 | AT1G80570.2 | 23.448 | 435 | 267 | 15 | 55 | 453 | 8 | 412 | 2.88e-13 | 72.8 |
| Msa0052440 | AT1G80570.1 | 24.242 | 429 | 259 | 17 | 61 | 453 | 1 | 399 | 8.13e-13 | 71.2 |
| Msa0052440 | AT1G80570.3 | 24.242 | 429 | 259 | 17 | 61 | 453 | 1 | 399 | 8.13e-13 | 71.2 |
| Msa0052440 | AT3G07550.1 | 24.176 | 364 | 218 | 14 | 61 | 377 | 15 | 367 | 1.63e-12 | 69.7 |
| Msa0052440 | AT3G07550.2 | 24.176 | 364 | 218 | 14 | 61 | 377 | 15 | 367 | 1.63e-12 | 69.7 |
| Msa0052440 | AT5G25350.1 | 32.653 | 196 | 89 | 7 | 294 | 453 | 180 | 368 | 5.03e-12 | 68.9 |
| Msa0052440 | AT4G03190.1 | 22.222 | 441 | 239 | 14 | 80 | 443 | 22 | 435 | 9.43e-11 | 65.1 |
Find 152 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCACCAATTCTTGCAAATT+AGG | 0.147721 | 1_2:-6703844 | None:intergenic |
| GACCTTCACTTTCACCAAAT+TGG | 0.167556 | 1_2:-6704073 | None:intergenic |
| TATTTCGAATTGTTCGAATT+TGG | 0.247249 | 1_2:+6703669 | Msa0052440:CDS |
| AGTTGTCCTGTTTCTGATCT+TGG | 0.260446 | 1_2:+6704024 | Msa0052440:CDS |
| AGGCTTCAGATTAGTGATAT+TGG | 0.286479 | 1_2:+6703637 | Msa0052440:CDS |
| TTGCAAGAATTGGTGCTTAT+TGG | 0.291569 | 1_2:+6703850 | Msa0052440:CDS |
| TCGTGTGGATCTTGTACTTT+TGG | 0.297932 | 1_2:+6703313 | Msa0052440:CDS |
| CTTTATAATGGACAGTGTTT+TGG | 0.307331 | 1_2:+6703487 | Msa0052440:CDS |
| ATCGGTTGCCTGCACTTTCC+CGG | 0.307896 | 1_2:-6702805 | None:intergenic |
| GACACCTGAGTGTACTGATA+TGG | 0.308361 | 1_2:+6703711 | Msa0052440:CDS |
| TGATCTTGGGATGGAAGCTT+TGG | 0.309384 | 1_2:+6704038 | Msa0052440:CDS |
| GCACCAATTCTTGCAAATTA+GGG | 0.310819 | 1_2:-6703843 | None:intergenic |
| GGCGGTGGATCTGTTGGTTT+TGG | 0.323583 | 1_2:-6702831 | None:intergenic |
| TTGCCCTAATTTGCAAGAAT+TGG | 0.326430 | 1_2:+6703840 | Msa0052440:CDS |
| CTGAAAGATGTAAGTTGTTA+AGG | 0.328374 | 1_2:+6703749 | Msa0052440:CDS |
| ACCTTCACTTTCACCAAATT+GGG | 0.329278 | 1_2:-6704072 | None:intergenic |
| GGCACATGGGTGTCCCAATT+TGG | 0.331746 | 1_2:+6704059 | Msa0052440:CDS |
| CTCAACCAATCCCCGCCTTC+AGG | 0.338516 | 1_2:-6704117 | None:intergenic |
| ATCAGTGTTCACTCGTTTGC+CGG | 0.338793 | 1_2:+6703011 | Msa0052440:CDS |
| TGTTTGAAGGAACTTTATAA+TGG | 0.338946 | 1_2:+6703475 | Msa0052440:CDS |
| TATTTCGATGTTCCGGTGAT+TGG | 0.339573 | 1_2:+6703551 | Msa0052440:CDS |
| CTAAGAATTGTAAGGGTTTG+AGG | 0.347732 | 1_2:+6703284 | Msa0052440:CDS |
| AATTGTCGGTGAAGCGGCTT+AGG | 0.348422 | 1_2:+6703383 | Msa0052440:CDS |
| GTTGTCCTGTTTCTGATCTT+GGG | 0.350129 | 1_2:+6704025 | Msa0052440:CDS |
| CGCGACACGCGCGGAGCTTA+AGG | 0.354968 | 1_2:-6703231 | None:intergenic |
| TTGCATTGCTGCAAAGTGTT+TGG | 0.356470 | 1_2:+6703978 | Msa0052440:CDS |
| CGCGAAGTTTGATCTTCTTC+CGG | 0.356911 | 1_2:+6703081 | Msa0052440:CDS |
| TTGAAGCTATTTCGATGTTC+CGG | 0.378035 | 1_2:+6703544 | Msa0052440:CDS |
| TAACCCAACGAGAGTGAGTT+TGG | 0.378471 | 1_2:+6703876 | Msa0052440:CDS |
| AGTTCATTCAAGCAAAGGTT+AGG | 0.388373 | 1_2:+6704309 | Msa0052440:CDS |
| AAAGCCAATCTCTCTAGATT+CGG | 0.392075 | 1_2:-6703919 | None:intergenic |
| GTTGAAGACGATTTGTTTGA+AGG | 0.397116 | 1_2:+6703462 | Msa0052440:CDS |
| TTAAGGAAGCTACATATTGA+TGG | 0.408793 | 1_2:+6703766 | Msa0052440:CDS |
| CGATGTAGATGCCGCGGAGC+CGG | 0.410875 | 1_2:-6704253 | None:intergenic |
| GCCGCGGAGCCGGGCATTGA+AGG | 0.418437 | 1_2:-6704243 | None:intergenic |
| ATTTCGATGTTCCGGTGATT+GGG | 0.419025 | 1_2:+6703552 | Msa0052440:CDS |
| GGTTTCCGTAGCTGTGAATC+TGG | 0.427319 | 1_2:+6704149 | Msa0052440:CDS |
| GGGATTGGTTGAGGCACACT+AGG | 0.428246 | 1_2:+6704127 | Msa0052440:CDS |
| ACTTTCCCGGCGGTTGGTTC+CGG | 0.430973 | 1_2:-6702792 | None:intergenic |
| CCGCGCGTGTCGCGAACTTA+CGG | 0.432226 | 1_2:+6703240 | Msa0052440:CDS |
| GATGTAGATGCCGCGGAGCC+GGG | 0.436914 | 1_2:-6704252 | None:intergenic |
| GCCTGCACTTTCCCGGCGGT+TGG | 0.443897 | 1_2:-6702798 | None:intergenic |
| GTTCACTCGTTTGCCGGCGG+TGG | 0.448947 | 1_2:+6703017 | Msa0052440:CDS |
| GGGATGGAAGCTTTGGCACA+TGG | 0.450411 | 1_2:+6704045 | Msa0052440:CDS |
| GCAAATCGGATTGGCGATGA+AGG | 0.452211 | 1_2:+6703796 | Msa0052440:CDS |
| TGGCTAGCACTTTGAGAAGA+TGG | 0.454655 | 1_2:+6704355 | Msa0052440:CDS |
| TTGCCCGAATCTAGAGAGAT+TGG | 0.454730 | 1_2:+6703915 | Msa0052440:CDS |
| TTAAACAGAGAAGGAATTAC+CGG | 0.456733 | 1_2:-6703100 | None:intergenic |
| CGGTGACGATGTTGCAGATC+CGG | 0.458209 | 1_2:+6702883 | Msa0052440:CDS |
| TCGTTACCGTCACCGTCAAC+CGG | 0.458796 | 1_2:-6702902 | None:intergenic |
| CGGCGGTGGCTTCACGTTGA+AGG | 0.459312 | 1_2:+6703031 | Msa0052440:CDS |
| TGTCGCGAACTTACGGATGC+TGG | 0.459477 | 1_2:+6703247 | Msa0052440:CDS |
| AGGTAGATCTGATATATAAT+CGG | 0.459744 | 1_2:-6702939 | None:intergenic |
| CGAACTTACGGATGCTGGAA+TGG | 0.461081 | 1_2:+6703252 | Msa0052440:CDS |
| CAAAGGTTAGGGCTACTGTC+CGG | 0.463095 | 1_2:+6704321 | Msa0052440:CDS |
| AGCTTAAGGCGCGTGAGATT+AGG | 0.464192 | 1_2:-6703217 | None:intergenic |
| TCCTGTTTCTGATCTTGGGA+TGG | 0.465939 | 1_2:+6704029 | Msa0052440:CDS |
| TCCATCCCAAGATCAGAAAC+AGG | 0.475671 | 1_2:-6704030 | None:intergenic |
| AGTGAAGGTCAAGAAGTGTA+AGG | 0.477496 | 1_2:+6704086 | Msa0052440:CDS |
| CGCCGCGCTCGAGGAATTGT+CGG | 0.479472 | 1_2:+6703369 | Msa0052440:CDS |
| AAGCCAATCTCTCTAGATTC+GGG | 0.481744 | 1_2:-6703918 | None:intergenic |
| TTGATGGATGGAAGGCAAAT+CGG | 0.482279 | 1_2:+6703782 | Msa0052440:CDS |
| TTTCCAAACTCACTCTCGTT+GGG | 0.487824 | 1_2:-6703879 | None:intergenic |
| GATGGTGGAGCACAAGAGAA+TGG | 0.489500 | 1_2:+6704210 | Msa0052440:CDS |
| CGGTGACCGTGGAAGCTGCT+TGG | 0.490935 | 1_2:-6702772 | None:intergenic |
| GCGGCCACACCCGGTCCAAT+CGG | 0.492352 | 1_2:-6703433 | None:intergenic |
| TTACACCTGAAGGCGGGGAT+TGG | 0.492516 | 1_2:+6704112 | Msa0052440:CDS |
| GGTGGCTGAGCCGATTGGAC+CGG | 0.494009 | 1_2:+6703423 | Msa0052440:CDS |
| AAAGGTTAGGGCTACTGTCC+GGG | 0.502510 | 1_2:+6704322 | Msa0052440:CDS |
| CAAGCAGCTTCCACGGTCAC+CGG | 0.502543 | 1_2:+6702773 | Msa0052440:CDS |
| ACACCTGAGTGTACTGATAT+GGG | 0.505583 | 1_2:+6703712 | Msa0052440:CDS |
| ATTGAATTTCCTTCAATGCC+CGG | 0.508171 | 1_2:+6704234 | Msa0052440:CDS |
| ACCAACCGCCGGGAAAGTGC+AGG | 0.508208 | 1_2:+6702797 | Msa0052440:CDS |
| GATCGAGTTCATTCAAGCAA+AGG | 0.510836 | 1_2:+6704304 | Msa0052440:CDS |
| ATTTCCAAACTCACTCTCGT+TGG | 0.512369 | 1_2:-6703880 | None:intergenic |
| CTGAAGGCGGGGATTGGTTG+AGG | 0.513919 | 1_2:+6704118 | Msa0052440:CDS |
| GCAGCAATGCAAGATATCTC+AGG | 0.514016 | 1_2:-6703967 | None:intergenic |
| ATTGTCGGTGAAGCGGCTTA+GGG | 0.516744 | 1_2:+6703384 | Msa0052440:CDS |
| GAGAGTGAGTTTGGAAATGT+TGG | 0.516798 | 1_2:+6703885 | Msa0052440:CDS |
| CGGCTCCGCGGCATCTACAT+CGG | 0.517144 | 1_2:+6704254 | Msa0052440:CDS |
| AGCACTTTGAGAAGATGGTC+AGG | 0.520658 | 1_2:+6704360 | Msa0052440:CDS |
| CTCTTGTCTCTAACCATGAC+GGG | 0.521217 | 1_2:-6704397 | None:intergenic |
| CGGTCACCGGAACCAACCGC+CGG | 0.521564 | 1_2:+6702786 | Msa0052440:CDS |
| AACCAACAGATCCACCGCCT+TGG | 0.526292 | 1_2:+6702835 | Msa0052440:CDS |
| ATGGTGGAGCACAAGAGAAT+GGG | 0.527565 | 1_2:+6704211 | Msa0052440:CDS |
| ACAATCGCTAAACATTCATC+AGG | 0.529545 | 1_2:-6702959 | None:intergenic |
| ACTGCGGTGGCTGAGCCGAT+TGG | 0.531430 | 1_2:+6703418 | Msa0052440:CDS |
| TACACTTATGGCTGAAAGAG+TGG | 0.532582 | 1_2:+6703585 | Msa0052440:CDS |
| AACCAAGGCGGTGGATCTGT+TGG | 0.533705 | 1_2:-6702837 | None:intergenic |
| AGGGTGTTACACCTGAAGGC+GGG | 0.535285 | 1_2:+6704106 | Msa0052440:CDS |
| GGTGACGGTAACGACGGAAT+CGG | 0.538000 | 1_2:+6702911 | Msa0052440:CDS |
| GATGGGCCAAGCAGCTTCCA+CGG | 0.538513 | 1_2:+6702766 | None:intergenic |
| TCCTTCAATGCCCGGCTCCG+CGG | 0.540180 | 1_2:+6704242 | Msa0052440:CDS |
| GGATGGAAGCTTTGGCACAT+GGG | 0.540954 | 1_2:+6704046 | Msa0052440:CDS |
| GGATGGAAGGCAAATCGGAT+TGG | 0.542728 | 1_2:+6703787 | Msa0052440:CDS |
| TGAAAATTGCGCCGCGCTCG+AGG | 0.548189 | 1_2:+6703360 | Msa0052440:CDS |
| GTTCATTCAAGCAAAGGTTA+GGG | 0.551510 | 1_2:+6704310 | Msa0052440:CDS |
| GTGGCTGAGCCGATTGGACC+GGG | 0.559010 | 1_2:+6703424 | Msa0052440:CDS |
| CATCGGAGAAACCAAGGCGG+TGG | 0.561191 | 1_2:-6702846 | None:intergenic |
| AACGACGCAGCGGCCACACC+CGG | 0.561295 | 1_2:-6703442 | None:intergenic |
| TCAAATCGATTAAACAGAGA+AGG | 0.563215 | 1_2:-6703109 | None:intergenic |
| CGTAGCTGTGAATCTGGACG+CGG | 0.571152 | 1_2:+6704155 | Msa0052440:CDS |
| GGTCACCGGAACCAACCGCC+GGG | 0.573207 | 1_2:+6702787 | Msa0052440:CDS |
| CTTCAACGTGAAGCCACCGC+CGG | 0.574094 | 1_2:-6703030 | None:intergenic |
| CCGTCGTCGGTGGAGATCAT+CGG | 0.576061 | 1_2:-6702863 | None:intergenic |
| GGATTGGTTGAGGCACACTA+GGG | 0.579593 | 1_2:+6704128 | Msa0052440:CDS |
| CCGTAAGTTCGCGACACGCG+CGG | 0.579903 | 1_2:-6703240 | None:intergenic |
| TGAGCCGATTGGACCGGGTG+TGG | 0.583172 | 1_2:+6703429 | Msa0052440:CDS |
| CGCGTCCAGATTCACAGCTA+CGG | 0.591102 | 1_2:-6704154 | None:intergenic |
| TGCAACATCGTCACCGTCGT+CGG | 0.591831 | 1_2:-6702876 | None:intergenic |
| GCAGATCCGGTTGACGGTGA+CGG | 0.594512 | 1_2:+6702896 | Msa0052440:CDS |
| TCGAGGAATTGTCGGTGAAG+CGG | 0.594693 | 1_2:+6703377 | Msa0052440:CDS |
| AGTCGTTGAATCCCTCTGAT+CGG | 0.596436 | 1_2:+6702987 | Msa0052440:CDS |
| CACCGACAATTCCTCGAGCG+CGG | 0.597818 | 1_2:-6703371 | None:intergenic |
| GGAAGCTACATATTGATGGA+TGG | 0.598307 | 1_2:+6703770 | Msa0052440:CDS |
| GCTACATATTGATGGATGGA+AGG | 0.601245 | 1_2:+6703774 | Msa0052440:CDS |
| GCGGTTGGTTCCGGTGACCG+TGG | 0.602758 | 1_2:-6702783 | None:intergenic |
| TGAACACTGATTCCGATCAG+AGG | 0.604053 | 1_2:-6702999 | None:intergenic |
| TAGGGGAATTGCTGAGACTG+CGG | 0.604704 | 1_2:+6703402 | Msa0052440:CDS |
| GTGAAGGTCAAGAAGTGTAA+GGG | 0.606922 | 1_2:+6704087 | Msa0052440:CDS |
| TGTAAGGGTGTTACACCTGA+AGG | 0.607758 | 1_2:+6704102 | Msa0052440:CDS |
| GCTCTTGTCTCTAACCATGA+CGG | 0.610454 | 1_2:-6704398 | None:intergenic |
| GAACACTGATTCCGATCAGA+GGG | 0.612028 | 1_2:-6702998 | None:intergenic |
| GATGCTAGTGCTAGTGATGG+TGG | 0.613432 | 1_2:+6704195 | Msa0052440:CDS |
| TTGAAGGACAGAGTCGTCAA+CGG | 0.623455 | 1_2:+6703047 | Msa0052440:CDS |
| TTGTCGGTGAAGCGGCTTAG+GGG | 0.627341 | 1_2:+6703385 | Msa0052440:CDS |
| CAAATCGGATTGGCGATGAA+GGG | 0.628264 | 1_2:+6703797 | Msa0052440:CDS |
| GGGTGTTACACCTGAAGGCG+GGG | 0.630505 | 1_2:+6704107 | Msa0052440:CDS |
| TGGCGATGAAGGGTTAATTG+CGG | 0.631783 | 1_2:+6703807 | Msa0052440:CDS |
| TCCCAATTTGGTGAAAGTGA+AGG | 0.632374 | 1_2:+6704071 | Msa0052440:CDS |
| TTGTGTGCAAGTGATACTGT+TGG | 0.633448 | 1_2:+6703940 | Msa0052440:CDS |
| AGTGTTCACTCGTTTGCCGG+CGG | 0.634069 | 1_2:+6703014 | Msa0052440:CDS |
| GGAGATCATCGGAGAAACCA+AGG | 0.642236 | 1_2:-6702852 | None:intergenic |
| AGTGGCGAGTATGATTGTTG+AGG | 0.646663 | 1_2:+6703603 | Msa0052440:CDS |
| GATGTTGCAGATCCGGTTGA+CGG | 0.647651 | 1_2:+6702890 | Msa0052440:CDS |
| AACATCGTCACCGTCGTCGG+TGG | 0.649647 | 1_2:-6702873 | None:intergenic |
| GGGAATTGCTGAGACTGCGG+TGG | 0.651918 | 1_2:+6703405 | Msa0052440:CDS |
| ATTTGCCGATGTAGATGCCG+CGG | 0.660814 | 1_2:-6704259 | None:intergenic |
| GGTAGCACTAGTGCCCGTCA+TGG | 0.661122 | 1_2:+6704384 | Msa0052440:CDS |
| CCGATGATCTCCACCGACGA+CGG | 0.668098 | 1_2:+6702863 | Msa0052440:CDS |
| CAAGATGCTAGTGCTAGTGA+TGG | 0.682263 | 1_2:+6704192 | Msa0052440:CDS |
| GGTTTGAGGAAATTATCGTG+TGG | 0.686243 | 1_2:+6703298 | Msa0052440:CDS |
| AAGGGTGTTACACCTGAAGG+CGG | 0.687864 | 1_2:+6704105 | Msa0052440:CDS |
| ACTGTCCGGGAGGAAAATTG+TGG | 0.692257 | 1_2:+6704335 | Msa0052440:CDS |
| ACTTTGAGAAGATGGTCAGG+TGG | 0.698161 | 1_2:+6704363 | Msa0052440:CDS |
| GTTGACGGTGACGGTAACGA+CGG | 0.702577 | 1_2:+6702905 | Msa0052440:CDS |
| AATCGTCTTCAACGACGCAG+CGG | 0.706961 | 1_2:-6703452 | None:intergenic |
| GGTTGCCTGCACTTTCCCGG+CGG | 0.709663 | 1_2:-6702802 | None:intergenic |
| GGTTAGGGCTACTGTCCGGG+AGG | 0.714520 | 1_2:+6704325 | Msa0052440:CDS |
| AGTCCCATATCAGTACACTC+AGG | 0.721622 | 1_2:-6703715 | None:intergenic |
| TGGATCTAAAGGTATGAACG+CGG | 0.726086 | 1_2:+6703333 | Msa0052440:CDS |
| GATCATCGGAGAAACCAAGG+CGG | 0.832722 | 1_2:-6702849 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGGTAGATCTGATATATAAT+CGG | - | chr1_2:6702942-6702961 | None:intergenic | 25.0% |
| ! | TGTTTGAAGGAACTTTATAA+TGG | + | chr1_2:6703475-6703494 | Msa0052440:CDS | 25.0% |
| ! | TATTTCGAATTGTTCGAATT+TGG | + | chr1_2:6703669-6703688 | Msa0052440:CDS | 25.0% |
| ! | AGGTAGATCTGATATATAAT+CGG | - | chr1_2:6702942-6702961 | None:intergenic | 25.0% |
| ! | TGTTTGAAGGAACTTTATAA+TGG | + | chr1_2:6703475-6703494 | Msa0052440:CDS | 25.0% |
| ! | TATTTCGAATTGTTCGAATT+TGG | + | chr1_2:6703669-6703688 | Msa0052440:CDS | 25.0% |
| TTAAACAGAGAAGGAATTAC+CGG | - | chr1_2:6703103-6703122 | None:intergenic | 30.0% | |
| TCAAATCGATTAAACAGAGA+AGG | - | chr1_2:6703112-6703131 | None:intergenic | 30.0% | |
| ! | AGCTTTTGCTAAGAATTGTA+AGG | + | chr1_2:6703276-6703295 | Msa0052440:CDS | 30.0% |
| ! | GCTTTTGCTAAGAATTGTAA+GGG | + | chr1_2:6703277-6703296 | Msa0052440:CDS | 30.0% |
| ! | TCTTGTACTTTTGGATCTAA+AGG | + | chr1_2:6703322-6703341 | Msa0052440:CDS | 30.0% |
| !!! | CTTTATAATGGACAGTGTTT+TGG | + | chr1_2:6703487-6703506 | Msa0052440:CDS | 30.0% |
| !!! | TGTTTTGGTTCGTTGATTTT+AGG | + | chr1_2:6703502-6703521 | Msa0052440:CDS | 30.0% |
| CTGAAAGATGTAAGTTGTTA+AGG | + | chr1_2:6703749-6703768 | Msa0052440:CDS | 30.0% | |
| TTAAGGAAGCTACATATTGA+TGG | + | chr1_2:6703766-6703785 | Msa0052440:CDS | 30.0% | |
| TTAAACAGAGAAGGAATTAC+CGG | - | chr1_2:6703103-6703122 | None:intergenic | 30.0% | |
| TCAAATCGATTAAACAGAGA+AGG | - | chr1_2:6703112-6703131 | None:intergenic | 30.0% | |
| ! | AGCTTTTGCTAAGAATTGTA+AGG | + | chr1_2:6703276-6703295 | Msa0052440:CDS | 30.0% |
| ! | GCTTTTGCTAAGAATTGTAA+GGG | + | chr1_2:6703277-6703296 | Msa0052440:CDS | 30.0% |
| ! | TCTTGTACTTTTGGATCTAA+AGG | + | chr1_2:6703322-6703341 | Msa0052440:CDS | 30.0% |
| !!! | CTTTATAATGGACAGTGTTT+TGG | + | chr1_2:6703487-6703506 | Msa0052440:CDS | 30.0% |
| !!! | TGTTTTGGTTCGTTGATTTT+AGG | + | chr1_2:6703502-6703521 | Msa0052440:CDS | 30.0% |
| CTGAAAGATGTAAGTTGTTA+AGG | + | chr1_2:6703749-6703768 | Msa0052440:CDS | 30.0% | |
| TTAAGGAAGCTACATATTGA+TGG | + | chr1_2:6703766-6703785 | Msa0052440:CDS | 30.0% | |
| !!! | ATCTGTTGGTTTTGGTAGAT+CGG | - | chr1_2:6702826-6702845 | None:intergenic | 35.0% |
| ACAATCGCTAAACATTCATC+AGG | - | chr1_2:6702962-6702981 | None:intergenic | 35.0% | |
| CTAAGAATTGTAAGGGTTTG+AGG | + | chr1_2:6703284-6703303 | Msa0052440:CDS | 35.0% | |
| ! | GTTGAAGACGATTTGTTTGA+AGG | + | chr1_2:6703462-6703481 | Msa0052440:CDS | 35.0% |
| ! | TTGAAGCTATTTCGATGTTC+CGG | + | chr1_2:6703544-6703563 | Msa0052440:CDS | 35.0% |
| !! | GGATACGCTTTTTACACTTA+TGG | + | chr1_2:6703573-6703592 | Msa0052440:CDS | 35.0% |
| ! | TTGTTGAGGTTCATTTTGAG+AGG | + | chr1_2:6703617-6703636 | Msa0052440:CDS | 35.0% |
| AGGCTTCAGATTAGTGATAT+TGG | + | chr1_2:6703637-6703656 | Msa0052440:CDS | 35.0% | |
| ! | TTGCCCTAATTTGCAAGAAT+TGG | + | chr1_2:6703840-6703859 | Msa0052440:CDS | 35.0% |
| GCACCAATTCTTGCAAATTA+GGG | - | chr1_2:6703846-6703865 | None:intergenic | 35.0% | |
| AGCACCAATTCTTGCAAATT+AGG | - | chr1_2:6703847-6703866 | None:intergenic | 35.0% | |
| ! | TTGCAAGAATTGGTGCTTAT+TGG | + | chr1_2:6703850-6703869 | Msa0052440:CDS | 35.0% |
| AAAGCCAATCTCTCTAGATT+CGG | - | chr1_2:6703922-6703941 | None:intergenic | 35.0% | |
| ACCTTCACTTTCACCAAATT+GGG | - | chr1_2:6704075-6704094 | None:intergenic | 35.0% | |
| ATTGAATTTCCTTCAATGCC+CGG | + | chr1_2:6704234-6704253 | Msa0052440:CDS | 35.0% | |
| AGTTCATTCAAGCAAAGGTT+AGG | + | chr1_2:6704309-6704328 | Msa0052440:CDS | 35.0% | |
| GTTCATTCAAGCAAAGGTTA+GGG | + | chr1_2:6704310-6704329 | Msa0052440:CDS | 35.0% | |
| !!! | ATCTGTTGGTTTTGGTAGAT+CGG | - | chr1_2:6702826-6702845 | None:intergenic | 35.0% |
| ACAATCGCTAAACATTCATC+AGG | - | chr1_2:6702962-6702981 | None:intergenic | 35.0% | |
| CTAAGAATTGTAAGGGTTTG+AGG | + | chr1_2:6703284-6703303 | Msa0052440:CDS | 35.0% | |
| ! | GTTGAAGACGATTTGTTTGA+AGG | + | chr1_2:6703462-6703481 | Msa0052440:CDS | 35.0% |
| ! | TTGAAGCTATTTCGATGTTC+CGG | + | chr1_2:6703544-6703563 | Msa0052440:CDS | 35.0% |
| !! | GGATACGCTTTTTACACTTA+TGG | + | chr1_2:6703573-6703592 | Msa0052440:CDS | 35.0% |
| ! | TTGTTGAGGTTCATTTTGAG+AGG | + | chr1_2:6703617-6703636 | Msa0052440:CDS | 35.0% |
| AGGCTTCAGATTAGTGATAT+TGG | + | chr1_2:6703637-6703656 | Msa0052440:CDS | 35.0% | |
| ! | TTGCCCTAATTTGCAAGAAT+TGG | + | chr1_2:6703840-6703859 | Msa0052440:CDS | 35.0% |
| GCACCAATTCTTGCAAATTA+GGG | - | chr1_2:6703846-6703865 | None:intergenic | 35.0% | |
| AGCACCAATTCTTGCAAATT+AGG | - | chr1_2:6703847-6703866 | None:intergenic | 35.0% | |
| ! | TTGCAAGAATTGGTGCTTAT+TGG | + | chr1_2:6703850-6703869 | Msa0052440:CDS | 35.0% |
| AAAGCCAATCTCTCTAGATT+CGG | - | chr1_2:6703922-6703941 | None:intergenic | 35.0% | |
| ACCTTCACTTTCACCAAATT+GGG | - | chr1_2:6704075-6704094 | None:intergenic | 35.0% | |
| ATTGAATTTCCTTCAATGCC+CGG | + | chr1_2:6704234-6704253 | Msa0052440:CDS | 35.0% | |
| AGTTCATTCAAGCAAAGGTT+AGG | + | chr1_2:6704309-6704328 | Msa0052440:CDS | 35.0% | |
| GTTCATTCAAGCAAAGGTTA+GGG | + | chr1_2:6704310-6704329 | Msa0052440:CDS | 35.0% | |
| GGTTTGAGGAAATTATCGTG+TGG | + | chr1_2:6703298-6703317 | Msa0052440:CDS | 40.0% | |
| ! | TCGTGTGGATCTTGTACTTT+TGG | + | chr1_2:6703313-6703332 | Msa0052440:CDS | 40.0% |
| ! | TGGATCTAAAGGTATGAACG+CGG | + | chr1_2:6703333-6703352 | Msa0052440:CDS | 40.0% |
| TATTTCGATGTTCCGGTGAT+TGG | + | chr1_2:6703551-6703570 | Msa0052440:CDS | 40.0% | |
| ATTTCGATGTTCCGGTGATT+GGG | + | chr1_2:6703552-6703571 | Msa0052440:CDS | 40.0% | |
| ! | AAAAAGCGTATCCCAATCAC+CGG | - | chr1_2:6703566-6703585 | None:intergenic | 40.0% |
| TACACTTATGGCTGAAAGAG+TGG | + | chr1_2:6703585-6703604 | Msa0052440:CDS | 40.0% | |
| ! | ACACCTGAGTGTACTGATAT+GGG | + | chr1_2:6703712-6703731 | Msa0052440:CDS | 40.0% |
| GGAAGCTACATATTGATGGA+TGG | + | chr1_2:6703770-6703789 | Msa0052440:CDS | 40.0% | |
| ! | GCTACATATTGATGGATGGA+AGG | + | chr1_2:6703774-6703793 | Msa0052440:CDS | 40.0% |
| ! | TTGATGGATGGAAGGCAAAT+CGG | + | chr1_2:6703782-6703801 | Msa0052440:CDS | 40.0% |
| TTTCCAAACTCACTCTCGTT+GGG | - | chr1_2:6703882-6703901 | None:intergenic | 40.0% | |
| ATTTCCAAACTCACTCTCGT+TGG | - | chr1_2:6703883-6703902 | None:intergenic | 40.0% | |
| GAGAGTGAGTTTGGAAATGT+TGG | + | chr1_2:6703885-6703904 | Msa0052440:CDS | 40.0% | |
| AAGCCAATCTCTCTAGATTC+GGG | - | chr1_2:6703921-6703940 | None:intergenic | 40.0% | |
| TTGTGTGCAAGTGATACTGT+TGG | + | chr1_2:6703940-6703959 | Msa0052440:CDS | 40.0% | |
| ! | TTGCATTGCTGCAAAGTGTT+TGG | + | chr1_2:6703978-6703997 | Msa0052440:CDS | 40.0% |
| !! | AGTTGTCCTGTTTCTGATCT+TGG | + | chr1_2:6704024-6704043 | Msa0052440:CDS | 40.0% |
| !! | GTTGTCCTGTTTCTGATCTT+GGG | + | chr1_2:6704025-6704044 | Msa0052440:CDS | 40.0% |
| ! | TCCCAATTTGGTGAAAGTGA+AGG | + | chr1_2:6704071-6704090 | Msa0052440:CDS | 40.0% |
| GACCTTCACTTTCACCAAAT+TGG | - | chr1_2:6704076-6704095 | None:intergenic | 40.0% | |
| ! | AGTGAAGGTCAAGAAGTGTA+AGG | + | chr1_2:6704086-6704105 | Msa0052440:CDS | 40.0% |
| ! | GTGAAGGTCAAGAAGTGTAA+GGG | + | chr1_2:6704087-6704106 | Msa0052440:CDS | 40.0% |
| GATCGAGTTCATTCAAGCAA+AGG | + | chr1_2:6704304-6704323 | Msa0052440:CDS | 40.0% | |
| GGTTTGAGGAAATTATCGTG+TGG | + | chr1_2:6703298-6703317 | Msa0052440:CDS | 40.0% | |
| ! | TCGTGTGGATCTTGTACTTT+TGG | + | chr1_2:6703313-6703332 | Msa0052440:CDS | 40.0% |
| ! | TGGATCTAAAGGTATGAACG+CGG | + | chr1_2:6703333-6703352 | Msa0052440:CDS | 40.0% |
| TATTTCGATGTTCCGGTGAT+TGG | + | chr1_2:6703551-6703570 | Msa0052440:CDS | 40.0% | |
| ATTTCGATGTTCCGGTGATT+GGG | + | chr1_2:6703552-6703571 | Msa0052440:CDS | 40.0% | |
| ! | AAAAAGCGTATCCCAATCAC+CGG | - | chr1_2:6703566-6703585 | None:intergenic | 40.0% |
| TACACTTATGGCTGAAAGAG+TGG | + | chr1_2:6703585-6703604 | Msa0052440:CDS | 40.0% | |
| ! | ACACCTGAGTGTACTGATAT+GGG | + | chr1_2:6703712-6703731 | Msa0052440:CDS | 40.0% |
| GGAAGCTACATATTGATGGA+TGG | + | chr1_2:6703770-6703789 | Msa0052440:CDS | 40.0% | |
| ! | GCTACATATTGATGGATGGA+AGG | + | chr1_2:6703774-6703793 | Msa0052440:CDS | 40.0% |
| ! | TTGATGGATGGAAGGCAAAT+CGG | + | chr1_2:6703782-6703801 | Msa0052440:CDS | 40.0% |
| TTTCCAAACTCACTCTCGTT+GGG | - | chr1_2:6703882-6703901 | None:intergenic | 40.0% | |
| ATTTCCAAACTCACTCTCGT+TGG | - | chr1_2:6703883-6703902 | None:intergenic | 40.0% | |
| GAGAGTGAGTTTGGAAATGT+TGG | + | chr1_2:6703885-6703904 | Msa0052440:CDS | 40.0% | |
| AAGCCAATCTCTCTAGATTC+GGG | - | chr1_2:6703921-6703940 | None:intergenic | 40.0% | |
| TTGTGTGCAAGTGATACTGT+TGG | + | chr1_2:6703940-6703959 | Msa0052440:CDS | 40.0% | |
| ! | TTGCATTGCTGCAAAGTGTT+TGG | + | chr1_2:6703978-6703997 | Msa0052440:CDS | 40.0% |
| !! | AGTTGTCCTGTTTCTGATCT+TGG | + | chr1_2:6704024-6704043 | Msa0052440:CDS | 40.0% |
| !! | GTTGTCCTGTTTCTGATCTT+GGG | + | chr1_2:6704025-6704044 | Msa0052440:CDS | 40.0% |
| ! | TCCCAATTTGGTGAAAGTGA+AGG | + | chr1_2:6704071-6704090 | Msa0052440:CDS | 40.0% |
| GACCTTCACTTTCACCAAAT+TGG | - | chr1_2:6704076-6704095 | None:intergenic | 40.0% | |
| ! | AGTGAAGGTCAAGAAGTGTA+AGG | + | chr1_2:6704086-6704105 | Msa0052440:CDS | 40.0% |
| ! | GTGAAGGTCAAGAAGTGTAA+GGG | + | chr1_2:6704087-6704106 | Msa0052440:CDS | 40.0% |
| GATCGAGTTCATTCAAGCAA+AGG | + | chr1_2:6704304-6704323 | Msa0052440:CDS | 40.0% | |
| AGTCGTTGAATCCCTCTGAT+CGG | + | chr1_2:6702987-6703006 | Msa0052440:CDS | 45.0% | |
| !! | GAACACTGATTCCGATCAGA+GGG | - | chr1_2:6703001-6703020 | None:intergenic | 45.0% |
| !! | TGAACACTGATTCCGATCAG+AGG | - | chr1_2:6703002-6703021 | None:intergenic | 45.0% |
| ATCAGTGTTCACTCGTTTGC+CGG | + | chr1_2:6703011-6703030 | Msa0052440:CDS | 45.0% | |
| TTGAAGGACAGAGTCGTCAA+CGG | + | chr1_2:6703047-6703066 | Msa0052440:CDS | 45.0% | |
| CGCGAAGTTTGATCTTCTTC+CGG | + | chr1_2:6703081-6703100 | Msa0052440:CDS | 45.0% | |
| AGTGGCGAGTATGATTGTTG+AGG | + | chr1_2:6703603-6703622 | Msa0052440:CDS | 45.0% | |
| ! | GACACCTGAGTGTACTGATA+TGG | + | chr1_2:6703711-6703730 | Msa0052440:CDS | 45.0% |
| AGTCCCATATCAGTACACTC+AGG | - | chr1_2:6703718-6703737 | None:intergenic | 45.0% | |
| !! | CAAATCGGATTGGCGATGAA+GGG | + | chr1_2:6703797-6703816 | Msa0052440:CDS | 45.0% |
| TGGCGATGAAGGGTTAATTG+CGG | + | chr1_2:6703807-6703826 | Msa0052440:CDS | 45.0% | |
| TAACCCAACGAGAGTGAGTT+TGG | + | chr1_2:6703876-6703895 | Msa0052440:CDS | 45.0% | |
| TTGCCCGAATCTAGAGAGAT+TGG | + | chr1_2:6703915-6703934 | Msa0052440:CDS | 45.0% | |
| GCAGCAATGCAAGATATCTC+AGG | - | chr1_2:6703970-6703989 | None:intergenic | 45.0% | |
| !! | TCCTGTTTCTGATCTTGGGA+TGG | + | chr1_2:6704029-6704048 | Msa0052440:CDS | 45.0% |
| TCCATCCCAAGATCAGAAAC+AGG | - | chr1_2:6704033-6704052 | None:intergenic | 45.0% | |
| TGATCTTGGGATGGAAGCTT+TGG | + | chr1_2:6704038-6704057 | Msa0052440:CDS | 45.0% | |
| !! | TGTAAGGGTGTTACACCTGA+AGG | + | chr1_2:6704102-6704121 | Msa0052440:CDS | 45.0% |
| CAAGATGCTAGTGCTAGTGA+TGG | + | chr1_2:6704192-6704211 | Msa0052440:CDS | 45.0% | |
| ! | ATGGTGGAGCACAAGAGAAT+GGG | + | chr1_2:6704211-6704230 | Msa0052440:CDS | 45.0% |
| ! | TGGCTAGCACTTTGAGAAGA+TGG | + | chr1_2:6704355-6704374 | Msa0052440:CDS | 45.0% |
| ! | AGCACTTTGAGAAGATGGTC+AGG | + | chr1_2:6704360-6704379 | Msa0052440:CDS | 45.0% |
| ! | ACTTTGAGAAGATGGTCAGG+TGG | + | chr1_2:6704363-6704382 | Msa0052440:CDS | 45.0% |
| AGTCGTTGAATCCCTCTGAT+CGG | + | chr1_2:6702987-6703006 | Msa0052440:CDS | 45.0% | |
| !! | GAACACTGATTCCGATCAGA+GGG | - | chr1_2:6703001-6703020 | None:intergenic | 45.0% |
| !! | TGAACACTGATTCCGATCAG+AGG | - | chr1_2:6703002-6703021 | None:intergenic | 45.0% |
| ATCAGTGTTCACTCGTTTGC+CGG | + | chr1_2:6703011-6703030 | Msa0052440:CDS | 45.0% | |
| TTGAAGGACAGAGTCGTCAA+CGG | + | chr1_2:6703047-6703066 | Msa0052440:CDS | 45.0% | |
| CGCGAAGTTTGATCTTCTTC+CGG | + | chr1_2:6703081-6703100 | Msa0052440:CDS | 45.0% | |
| AGTGGCGAGTATGATTGTTG+AGG | + | chr1_2:6703603-6703622 | Msa0052440:CDS | 45.0% | |
| ! | GACACCTGAGTGTACTGATA+TGG | + | chr1_2:6703711-6703730 | Msa0052440:CDS | 45.0% |
| AGTCCCATATCAGTACACTC+AGG | - | chr1_2:6703718-6703737 | None:intergenic | 45.0% | |
| !! | CAAATCGGATTGGCGATGAA+GGG | + | chr1_2:6703797-6703816 | Msa0052440:CDS | 45.0% |
| TGGCGATGAAGGGTTAATTG+CGG | + | chr1_2:6703807-6703826 | Msa0052440:CDS | 45.0% | |
| TAACCCAACGAGAGTGAGTT+TGG | + | chr1_2:6703876-6703895 | Msa0052440:CDS | 45.0% | |
| TTGCCCGAATCTAGAGAGAT+TGG | + | chr1_2:6703915-6703934 | Msa0052440:CDS | 45.0% | |
| GCAGCAATGCAAGATATCTC+AGG | - | chr1_2:6703970-6703989 | None:intergenic | 45.0% | |
| !! | TCCTGTTTCTGATCTTGGGA+TGG | + | chr1_2:6704029-6704048 | Msa0052440:CDS | 45.0% |
| TCCATCCCAAGATCAGAAAC+AGG | - | chr1_2:6704033-6704052 | None:intergenic | 45.0% | |
| TGATCTTGGGATGGAAGCTT+TGG | + | chr1_2:6704038-6704057 | Msa0052440:CDS | 45.0% | |
| !! | TGTAAGGGTGTTACACCTGA+AGG | + | chr1_2:6704102-6704121 | Msa0052440:CDS | 45.0% |
| CAAGATGCTAGTGCTAGTGA+TGG | + | chr1_2:6704192-6704211 | Msa0052440:CDS | 45.0% | |
| ! | ATGGTGGAGCACAAGAGAAT+GGG | + | chr1_2:6704211-6704230 | Msa0052440:CDS | 45.0% |
| ! | TGGCTAGCACTTTGAGAAGA+TGG | + | chr1_2:6704355-6704374 | Msa0052440:CDS | 45.0% |
| ! | AGCACTTTGAGAAGATGGTC+AGG | + | chr1_2:6704360-6704379 | Msa0052440:CDS | 45.0% |
| ! | ACTTTGAGAAGATGGTCAGG+TGG | + | chr1_2:6704363-6704382 | Msa0052440:CDS | 45.0% |
| GATCATCGGAGAAACCAAGG+CGG | - | chr1_2:6702852-6702871 | None:intergenic | 50.0% | |
| GGAGATCATCGGAGAAACCA+AGG | - | chr1_2:6702855-6702874 | None:intergenic | 50.0% | |
| GATGTTGCAGATCCGGTTGA+CGG | + | chr1_2:6702890-6702909 | Msa0052440:CDS | 50.0% | |
| AGCTTAAGGCGCGTGAGATT+AGG | - | chr1_2:6703220-6703239 | None:intergenic | 50.0% | |
| CGAACTTACGGATGCTGGAA+TGG | + | chr1_2:6703252-6703271 | Msa0052440:CDS | 50.0% | |
| TCGAGGAATTGTCGGTGAAG+CGG | + | chr1_2:6703377-6703396 | Msa0052440:CDS | 50.0% | |
| AATTGTCGGTGAAGCGGCTT+AGG | + | chr1_2:6703383-6703402 | Msa0052440:CDS | 50.0% | |
| ATTGTCGGTGAAGCGGCTTA+GGG | + | chr1_2:6703384-6703403 | Msa0052440:CDS | 50.0% | |
| TAGGGGAATTGCTGAGACTG+CGG | + | chr1_2:6703402-6703421 | Msa0052440:CDS | 50.0% | |
| AATCGTCTTCAACGACGCAG+CGG | - | chr1_2:6703455-6703474 | None:intergenic | 50.0% | |
| GGATGGAAGGCAAATCGGAT+TGG | + | chr1_2:6703787-6703806 | Msa0052440:CDS | 50.0% | |
| !! | GCAAATCGGATTGGCGATGA+AGG | + | chr1_2:6703796-6703815 | Msa0052440:CDS | 50.0% |
| ! | GGATGGAAGCTTTGGCACAT+GGG | + | chr1_2:6704046-6704065 | Msa0052440:CDS | 50.0% |
| !! | AAGGGTGTTACACCTGAAGG+CGG | + | chr1_2:6704105-6704124 | Msa0052440:CDS | 50.0% |
| !! | GGATTGGTTGAGGCACACTA+GGG | + | chr1_2:6704128-6704147 | Msa0052440:CDS | 50.0% |
| GGTTTCCGTAGCTGTGAATC+TGG | + | chr1_2:6704149-6704168 | Msa0052440:CDS | 50.0% | |
| GATGCTAGTGCTAGTGATGG+TGG | + | chr1_2:6704195-6704214 | Msa0052440:CDS | 50.0% | |
| !! | GATGGTGGAGCACAAGAGAA+TGG | + | chr1_2:6704210-6704229 | Msa0052440:CDS | 50.0% |
| ATTTGCCGATGTAGATGCCG+CGG | - | chr1_2:6704262-6704281 | None:intergenic | 50.0% | |
| CAAAGGTTAGGGCTACTGTC+CGG | + | chr1_2:6704321-6704340 | Msa0052440:CDS | 50.0% | |
| AAAGGTTAGGGCTACTGTCC+GGG | + | chr1_2:6704322-6704341 | Msa0052440:CDS | 50.0% | |
| ACTGTCCGGGAGGAAAATTG+TGG | + | chr1_2:6704335-6704354 | Msa0052440:CDS | 50.0% | |
| ! | GCTAGCCACAATTTTCCTCC+CGG | - | chr1_2:6704343-6704362 | None:intergenic | 50.0% |
| GATCATCGGAGAAACCAAGG+CGG | - | chr1_2:6702852-6702871 | None:intergenic | 50.0% | |
| GGAGATCATCGGAGAAACCA+AGG | - | chr1_2:6702855-6702874 | None:intergenic | 50.0% | |
| GATGTTGCAGATCCGGTTGA+CGG | + | chr1_2:6702890-6702909 | Msa0052440:CDS | 50.0% | |
| AGCTTAAGGCGCGTGAGATT+AGG | - | chr1_2:6703220-6703239 | None:intergenic | 50.0% | |
| CGAACTTACGGATGCTGGAA+TGG | + | chr1_2:6703252-6703271 | Msa0052440:CDS | 50.0% | |
| TCGAGGAATTGTCGGTGAAG+CGG | + | chr1_2:6703377-6703396 | Msa0052440:CDS | 50.0% | |
| AATTGTCGGTGAAGCGGCTT+AGG | + | chr1_2:6703383-6703402 | Msa0052440:CDS | 50.0% | |
| ATTGTCGGTGAAGCGGCTTA+GGG | + | chr1_2:6703384-6703403 | Msa0052440:CDS | 50.0% | |
| TAGGGGAATTGCTGAGACTG+CGG | + | chr1_2:6703402-6703421 | Msa0052440:CDS | 50.0% | |
| AATCGTCTTCAACGACGCAG+CGG | - | chr1_2:6703455-6703474 | None:intergenic | 50.0% | |
| GGATGGAAGGCAAATCGGAT+TGG | + | chr1_2:6703787-6703806 | Msa0052440:CDS | 50.0% | |
| !! | GCAAATCGGATTGGCGATGA+AGG | + | chr1_2:6703796-6703815 | Msa0052440:CDS | 50.0% |
| ! | GGATGGAAGCTTTGGCACAT+GGG | + | chr1_2:6704046-6704065 | Msa0052440:CDS | 50.0% |
| !! | AAGGGTGTTACACCTGAAGG+CGG | + | chr1_2:6704105-6704124 | Msa0052440:CDS | 50.0% |
| !! | GGATTGGTTGAGGCACACTA+GGG | + | chr1_2:6704128-6704147 | Msa0052440:CDS | 50.0% |
| GGTTTCCGTAGCTGTGAATC+TGG | + | chr1_2:6704149-6704168 | Msa0052440:CDS | 50.0% | |
| GATGCTAGTGCTAGTGATGG+TGG | + | chr1_2:6704195-6704214 | Msa0052440:CDS | 50.0% | |
| !! | GATGGTGGAGCACAAGAGAA+TGG | + | chr1_2:6704210-6704229 | Msa0052440:CDS | 50.0% |
| ATTTGCCGATGTAGATGCCG+CGG | - | chr1_2:6704262-6704281 | None:intergenic | 50.0% | |
| CAAAGGTTAGGGCTACTGTC+CGG | + | chr1_2:6704321-6704340 | Msa0052440:CDS | 50.0% | |
| AAAGGTTAGGGCTACTGTCC+GGG | + | chr1_2:6704322-6704341 | Msa0052440:CDS | 50.0% | |
| ACTGTCCGGGAGGAAAATTG+TGG | + | chr1_2:6704335-6704354 | Msa0052440:CDS | 50.0% | |
| ! | GCTAGCCACAATTTTCCTCC+CGG | - | chr1_2:6704343-6704362 | None:intergenic | 50.0% |
| ATCGGTTGCCTGCACTTTCC+CGG | - | chr1_2:6702808-6702827 | None:intergenic | 55.0% | |
| !!! | GGCGGTGGATCTGTTGGTTT+TGG | - | chr1_2:6702834-6702853 | None:intergenic | 55.0% |
| AACCAACAGATCCACCGCCT+TGG | + | chr1_2:6702835-6702854 | Msa0052440:CDS | 55.0% | |
| AACCAAGGCGGTGGATCTGT+TGG | - | chr1_2:6702840-6702859 | None:intergenic | 55.0% | |
| TGCAACATCGTCACCGTCGT+CGG | - | chr1_2:6702879-6702898 | None:intergenic | 55.0% | |
| CGGTGACGATGTTGCAGATC+CGG | + | chr1_2:6702883-6702902 | Msa0052440:CDS | 55.0% | |
| TCGTTACCGTCACCGTCAAC+CGG | - | chr1_2:6702905-6702924 | None:intergenic | 55.0% | |
| ! | GTTGACGGTGACGGTAACGA+CGG | + | chr1_2:6702905-6702924 | Msa0052440:CDS | 55.0% |
| ! | GGTGACGGTAACGACGGAAT+CGG | + | chr1_2:6702911-6702930 | Msa0052440:CDS | 55.0% |
| AGTGTTCACTCGTTTGCCGG+CGG | + | chr1_2:6703014-6703033 | Msa0052440:CDS | 55.0% | |
| TGTCGCGAACTTACGGATGC+TGG | + | chr1_2:6703247-6703266 | Msa0052440:CDS | 55.0% | |
| TTGTCGGTGAAGCGGCTTAG+GGG | + | chr1_2:6703385-6703404 | Msa0052440:CDS | 55.0% | |
| ! | GGGATGGAAGCTTTGGCACA+TGG | + | chr1_2:6704045-6704064 | Msa0052440:CDS | 55.0% |
| GGCACATGGGTGTCCCAATT+TGG | + | chr1_2:6704059-6704078 | Msa0052440:CDS | 55.0% | |
| ! | AGGGTGTTACACCTGAAGGC+GGG | + | chr1_2:6704106-6704125 | Msa0052440:CDS | 55.0% |
| TTACACCTGAAGGCGGGGAT+TGG | + | chr1_2:6704112-6704131 | Msa0052440:CDS | 55.0% | |
| !! | GGGATTGGTTGAGGCACACT+AGG | + | chr1_2:6704127-6704146 | Msa0052440:CDS | 55.0% |
| CGCGTCCAGATTCACAGCTA+CGG | - | chr1_2:6704157-6704176 | None:intergenic | 55.0% | |
| CGTAGCTGTGAATCTGGACG+CGG | + | chr1_2:6704155-6704174 | Msa0052440:CDS | 55.0% | |
| ATCGGTTGCCTGCACTTTCC+CGG | - | chr1_2:6702808-6702827 | None:intergenic | 55.0% | |
| !!! | GGCGGTGGATCTGTTGGTTT+TGG | - | chr1_2:6702834-6702853 | None:intergenic | 55.0% |
| AACCAACAGATCCACCGCCT+TGG | + | chr1_2:6702835-6702854 | Msa0052440:CDS | 55.0% | |
| AACCAAGGCGGTGGATCTGT+TGG | - | chr1_2:6702840-6702859 | None:intergenic | 55.0% | |
| TGCAACATCGTCACCGTCGT+CGG | - | chr1_2:6702879-6702898 | None:intergenic | 55.0% | |
| CGGTGACGATGTTGCAGATC+CGG | + | chr1_2:6702883-6702902 | Msa0052440:CDS | 55.0% | |
| TCGTTACCGTCACCGTCAAC+CGG | - | chr1_2:6702905-6702924 | None:intergenic | 55.0% | |
| ! | GTTGACGGTGACGGTAACGA+CGG | + | chr1_2:6702905-6702924 | Msa0052440:CDS | 55.0% |
| ! | GGTGACGGTAACGACGGAAT+CGG | + | chr1_2:6702911-6702930 | Msa0052440:CDS | 55.0% |
| AGTGTTCACTCGTTTGCCGG+CGG | + | chr1_2:6703014-6703033 | Msa0052440:CDS | 55.0% | |
| TGTCGCGAACTTACGGATGC+TGG | + | chr1_2:6703247-6703266 | Msa0052440:CDS | 55.0% | |
| TTGTCGGTGAAGCGGCTTAG+GGG | + | chr1_2:6703385-6703404 | Msa0052440:CDS | 55.0% | |
| ! | GGGATGGAAGCTTTGGCACA+TGG | + | chr1_2:6704045-6704064 | Msa0052440:CDS | 55.0% |
| GGCACATGGGTGTCCCAATT+TGG | + | chr1_2:6704059-6704078 | Msa0052440:CDS | 55.0% | |
| ! | AGGGTGTTACACCTGAAGGC+GGG | + | chr1_2:6704106-6704125 | Msa0052440:CDS | 55.0% |
| TTACACCTGAAGGCGGGGAT+TGG | + | chr1_2:6704112-6704131 | Msa0052440:CDS | 55.0% | |
| !! | GGGATTGGTTGAGGCACACT+AGG | + | chr1_2:6704127-6704146 | Msa0052440:CDS | 55.0% |
| CGCGTCCAGATTCACAGCTA+CGG | - | chr1_2:6704157-6704176 | None:intergenic | 55.0% | |
| CGTAGCTGTGAATCTGGACG+CGG | + | chr1_2:6704155-6704174 | Msa0052440:CDS | 55.0% | |
| CAAGCAGCTTCCACGGTCAC+CGG | + | chr1_2:6702773-6702792 | Msa0052440:CDS | 60.0% | |
| ! | ACTTTCCCGGCGGTTGGTTC+CGG | - | chr1_2:6702795-6702814 | None:intergenic | 60.0% |
| CATCGGAGAAACCAAGGCGG+TGG | - | chr1_2:6702849-6702868 | None:intergenic | 60.0% | |
| CCGTCGTCGGTGGAGATCAT+CGG | - | chr1_2:6702866-6702885 | None:intergenic | 60.0% | |
| CCGATGATCTCCACCGACGA+CGG | + | chr1_2:6702863-6702882 | Msa0052440:CDS | 60.0% | |
| AACATCGTCACCGTCGTCGG+TGG | - | chr1_2:6702876-6702895 | None:intergenic | 60.0% | |
| GCAGATCCGGTTGACGGTGA+CGG | + | chr1_2:6702896-6702915 | Msa0052440:CDS | 60.0% | |
| CTTCAACGTGAAGCCACCGC+CGG | - | chr1_2:6703033-6703052 | None:intergenic | 60.0% | |
| TGAAAATTGCGCCGCGCTCG+AGG | + | chr1_2:6703360-6703379 | Msa0052440:CDS | 60.0% | |
| CACCGACAATTCCTCGAGCG+CGG | - | chr1_2:6703374-6703393 | None:intergenic | 60.0% | |
| GGGAATTGCTGAGACTGCGG+TGG | + | chr1_2:6703405-6703424 | Msa0052440:CDS | 60.0% | |
| ! | GGGTGTTACACCTGAAGGCG+GGG | + | chr1_2:6704107-6704126 | Msa0052440:CDS | 60.0% |
| CTCAACCAATCCCCGCCTTC+AGG | - | chr1_2:6704120-6704139 | None:intergenic | 60.0% | |
| !! | CTGAAGGCGGGGATTGGTTG+AGG | + | chr1_2:6704118-6704137 | Msa0052440:CDS | 60.0% |
| GGTAGCACTAGTGCCCGTCA+TGG | + | chr1_2:6704384-6704403 | Msa0052440:CDS | 60.0% | |
| CAAGCAGCTTCCACGGTCAC+CGG | + | chr1_2:6702773-6702792 | Msa0052440:CDS | 60.0% | |
| ! | ACTTTCCCGGCGGTTGGTTC+CGG | - | chr1_2:6702795-6702814 | None:intergenic | 60.0% |
| CATCGGAGAAACCAAGGCGG+TGG | - | chr1_2:6702849-6702868 | None:intergenic | 60.0% | |
| CCGTCGTCGGTGGAGATCAT+CGG | - | chr1_2:6702866-6702885 | None:intergenic | 60.0% | |
| CCGATGATCTCCACCGACGA+CGG | + | chr1_2:6702863-6702882 | Msa0052440:CDS | 60.0% | |
| AACATCGTCACCGTCGTCGG+TGG | - | chr1_2:6702876-6702895 | None:intergenic | 60.0% | |
| GCAGATCCGGTTGACGGTGA+CGG | + | chr1_2:6702896-6702915 | Msa0052440:CDS | 60.0% | |
| CTTCAACGTGAAGCCACCGC+CGG | - | chr1_2:6703033-6703052 | None:intergenic | 60.0% | |
| TGAAAATTGCGCCGCGCTCG+AGG | + | chr1_2:6703360-6703379 | Msa0052440:CDS | 60.0% | |
| CACCGACAATTCCTCGAGCG+CGG | - | chr1_2:6703374-6703393 | None:intergenic | 60.0% | |
| GGGAATTGCTGAGACTGCGG+TGG | + | chr1_2:6703405-6703424 | Msa0052440:CDS | 60.0% | |
| ! | GGGTGTTACACCTGAAGGCG+GGG | + | chr1_2:6704107-6704126 | Msa0052440:CDS | 60.0% |
| CTCAACCAATCCCCGCCTTC+AGG | - | chr1_2:6704120-6704139 | None:intergenic | 60.0% | |
| !! | CTGAAGGCGGGGATTGGTTG+AGG | + | chr1_2:6704118-6704137 | Msa0052440:CDS | 60.0% |
| GGTAGCACTAGTGCCCGTCA+TGG | + | chr1_2:6704384-6704403 | Msa0052440:CDS | 60.0% | |
| CGGTGACCGTGGAAGCTGCT+TGG | - | chr1_2:6702775-6702794 | None:intergenic | 65.0% | |
| ! | ACCAACCGCCGGGAAAGTGC+AGG | + | chr1_2:6702797-6702816 | Msa0052440:CDS | 65.0% |
| GGTTGCCTGCACTTTCCCGG+CGG | - | chr1_2:6702805-6702824 | None:intergenic | 65.0% | |
| GTTCACTCGTTTGCCGGCGG+TGG | + | chr1_2:6703017-6703036 | Msa0052440:CDS | 65.0% | |
| CGGCGGTGGCTTCACGTTGA+AGG | + | chr1_2:6703031-6703050 | Msa0052440:CDS | 65.0% | |
| CCGTAAGTTCGCGACACGCG+CGG | - | chr1_2:6703243-6703262 | None:intergenic | 65.0% | |
| CCGCGCGTGTCGCGAACTTA+CGG | + | chr1_2:6703240-6703259 | Msa0052440:CDS | 65.0% | |
| CGCCGCGCTCGAGGAATTGT+CGG | + | chr1_2:6703369-6703388 | Msa0052440:CDS | 65.0% | |
| ACTGCGGTGGCTGAGCCGAT+TGG | + | chr1_2:6703418-6703437 | Msa0052440:CDS | 65.0% | |
| GGTGGCTGAGCCGATTGGAC+CGG | + | chr1_2:6703423-6703442 | Msa0052440:CDS | 65.0% | |
| GTGGCTGAGCCGATTGGACC+GGG | + | chr1_2:6703424-6703443 | Msa0052440:CDS | 65.0% | |
| TGAGCCGATTGGACCGGGTG+TGG | + | chr1_2:6703429-6703448 | Msa0052440:CDS | 65.0% | |
| TCCTTCAATGCCCGGCTCCG+CGG | + | chr1_2:6704242-6704261 | Msa0052440:CDS | 65.0% | |
| GATGTAGATGCCGCGGAGCC+GGG | - | chr1_2:6704255-6704274 | None:intergenic | 65.0% | |
| CGATGTAGATGCCGCGGAGC+CGG | - | chr1_2:6704256-6704275 | None:intergenic | 65.0% | |
| CGGCTCCGCGGCATCTACAT+CGG | + | chr1_2:6704254-6704273 | Msa0052440:CDS | 65.0% | |
| GGTTAGGGCTACTGTCCGGG+AGG | + | chr1_2:6704325-6704344 | Msa0052440:CDS | 65.0% | |
| CGGTGACCGTGGAAGCTGCT+TGG | - | chr1_2:6702775-6702794 | None:intergenic | 65.0% | |
| ! | ACCAACCGCCGGGAAAGTGC+AGG | + | chr1_2:6702797-6702816 | Msa0052440:CDS | 65.0% |
| GGTTGCCTGCACTTTCCCGG+CGG | - | chr1_2:6702805-6702824 | None:intergenic | 65.0% | |
| GTTCACTCGTTTGCCGGCGG+TGG | + | chr1_2:6703017-6703036 | Msa0052440:CDS | 65.0% | |
| CGGCGGTGGCTTCACGTTGA+AGG | + | chr1_2:6703031-6703050 | Msa0052440:CDS | 65.0% | |
| CCGTAAGTTCGCGACACGCG+CGG | - | chr1_2:6703243-6703262 | None:intergenic | 65.0% | |
| CCGCGCGTGTCGCGAACTTA+CGG | + | chr1_2:6703240-6703259 | Msa0052440:CDS | 65.0% | |
| CGCCGCGCTCGAGGAATTGT+CGG | + | chr1_2:6703369-6703388 | Msa0052440:CDS | 65.0% | |
| ACTGCGGTGGCTGAGCCGAT+TGG | + | chr1_2:6703418-6703437 | Msa0052440:CDS | 65.0% | |
| GGTGGCTGAGCCGATTGGAC+CGG | + | chr1_2:6703423-6703442 | Msa0052440:CDS | 65.0% | |
| GTGGCTGAGCCGATTGGACC+GGG | + | chr1_2:6703424-6703443 | Msa0052440:CDS | 65.0% | |
| TGAGCCGATTGGACCGGGTG+TGG | + | chr1_2:6703429-6703448 | Msa0052440:CDS | 65.0% | |
| TCCTTCAATGCCCGGCTCCG+CGG | + | chr1_2:6704242-6704261 | Msa0052440:CDS | 65.0% | |
| GATGTAGATGCCGCGGAGCC+GGG | - | chr1_2:6704255-6704274 | None:intergenic | 65.0% | |
| CGATGTAGATGCCGCGGAGC+CGG | - | chr1_2:6704256-6704275 | None:intergenic | 65.0% | |
| CGGCTCCGCGGCATCTACAT+CGG | + | chr1_2:6704254-6704273 | Msa0052440:CDS | 65.0% | |
| GGTTAGGGCTACTGTCCGGG+AGG | + | chr1_2:6704325-6704344 | Msa0052440:CDS | 65.0% | |
| ! | GCGGTTGGTTCCGGTGACCG+TGG | - | chr1_2:6702786-6702805 | None:intergenic | 70.0% |
| CGGTCACCGGAACCAACCGC+CGG | + | chr1_2:6702786-6702805 | Msa0052440:CDS | 70.0% | |
| GGTCACCGGAACCAACCGCC+GGG | + | chr1_2:6702787-6702806 | Msa0052440:CDS | 70.0% | |
| GCCTGCACTTTCCCGGCGGT+TGG | - | chr1_2:6702801-6702820 | None:intergenic | 70.0% | |
| CGCGACACGCGCGGAGCTTA+AGG | - | chr1_2:6703234-6703253 | None:intergenic | 70.0% | |
| GCGGCCACACCCGGTCCAAT+CGG | - | chr1_2:6703436-6703455 | None:intergenic | 70.0% | |
| AACGACGCAGCGGCCACACC+CGG | - | chr1_2:6703445-6703464 | None:intergenic | 70.0% | |
| ! | GCGGTTGGTTCCGGTGACCG+TGG | - | chr1_2:6702786-6702805 | None:intergenic | 70.0% |
| CGGTCACCGGAACCAACCGC+CGG | + | chr1_2:6702786-6702805 | Msa0052440:CDS | 70.0% | |
| GGTCACCGGAACCAACCGCC+GGG | + | chr1_2:6702787-6702806 | Msa0052440:CDS | 70.0% | |
| GCCTGCACTTTCCCGGCGGT+TGG | - | chr1_2:6702801-6702820 | None:intergenic | 70.0% | |
| CGCGACACGCGCGGAGCTTA+AGG | - | chr1_2:6703234-6703253 | None:intergenic | 70.0% | |
| GCGGCCACACCCGGTCCAAT+CGG | - | chr1_2:6703436-6703455 | None:intergenic | 70.0% | |
| AACGACGCAGCGGCCACACC+CGG | - | chr1_2:6703445-6703464 | None:intergenic | 70.0% | |
| !! | GCCGCGGAGCCGGGCATTGA+AGG | - | chr1_2:6704246-6704265 | None:intergenic | 75.0% |
| !! | GCCGCGGAGCCGGGCATTGA+AGG | - | chr1_2:6704246-6704265 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6702767 | 6704410 | 6702767 | ID=Msa0052440;Name=Msa0052440 |
| chr1_2 | mRNA | 6702767 | 6704410 | 6702767 | ID=Msa0052440-mRNA-1;Parent=Msa0052440;Name=Msa0052440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|547 |
| chr1_2 | exon | 6702767 | 6704410 | 6702767 | ID=Msa0052440-mRNA-1:exon:2205;Parent=Msa0052440-mRNA-1 |
| chr1_2 | CDS | 6702767 | 6704410 | 6702767 | ID=Msa0052440-mRNA-1:cds;Parent=Msa0052440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
