AlfalfaGEDB | Msa0188480

M. sativa cultivar zhongmu-4 / Msa0188480

KEGG: K06063
GO: GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
PFAM: PF02731.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0188480	KYP37197.1	72.093	430	75	5	1	399	84	499	0.0	602

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0188480	sp\|Q6K8D9\|SKIPA_ORYSJ	52.697	482	137	10	6	399	93	571	5.89e-142	432

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0188480	A0A151R3N8	72.093	430	75	5	1	399	84	499	0.0	602

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0188480	Msa0270500	0.847520	1.097738e-59	-8.615850e-47
Msa0188480	Msa0703780	0.813730	2.207746e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0188480	MtrunA17_Chr2g0277261	76.364	275	44	3	469	724	197	469	1.59e-135	408
Msa0188480	MtrunA17_Chr2g0292571	79.537	259	34	3	1	240	82	340	1.96e-133	407
Msa0188480	MtrunA17_Chr2g0292571	81.410	156	18	3	253	400	427	579	5.59e-71	243
Msa0188480	MtrunA17_Chr2g0277241	64.336	143	12	2	258	400	1	104	3.11e-49	167
Msa0188480	MtrunA17_Chr2g0277251	75.000	52	12	1	646	697	1	51	6.32e-20	83.6
Msa0188480	MtrunA17_Chr3g0120481	39.189	74	44	1	653	725	71	144	2.28e-12	69.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0188480	AT1G77180.3	69.112	259	61	2	1	240	81	339	4.17e-121	372
Msa0188480	AT1G77180.1	69.112	259	61	2	1	240	81	339	4.10e-120	373
Msa0188480	AT1G77180.1	64.375	160	44	4	251	399	417	574	4.79e-51	188
Msa0188480	AT1G77180.2	69.112	259	61	2	1	240	81	339	4.10e-120	373
Msa0188480	AT1G77180.2	64.375	160	44	4	251	399	417	574	4.79e-51	188
Msa0188480	AT1G14770.2	41.250	80	47	0	643	722	336	415	1.60e-15	80.1
Msa0188480	AT1G14770.1	41.250	80	47	0	643	722	336	415	1.60e-15	80.1

Find 176 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGGGTCACTGCTTCAAATT+TGG	0.125240	2_1:-3672073	Msa0188480:CDS
CCAAATGTTGCATCTTTAAA+TGG	0.160567	2_1:-3671517	Msa0188480:CDS
GAACTGGATTTGCATCTTAA+AGG	0.177484	2_1:-3671940	Msa0188480:CDS
GCGTGAGAATATTTACAAAA+TGG	0.241191	2_1:+3671175	None:intergenic
TTCATACCAATACAACTTTC+AGG	0.254355	2_1:+3671703	None:intergenic
CCTAATGCAGCGTTTAATTC+TGG	0.286517	2_1:-3673675	Msa0188480:CDS
GCTTATTTCTAAGAGGAATA+AGG	0.286679	2_1:-3672163	Msa0188480:intron
CCTCTTGGCTTAGTCATTGC+TGG	0.292197	2_1:+3671331	None:intergenic
CTGAGCTCCCAGCACGCTTT+TGG	0.294479	2_1:-3671364	Msa0188480:CDS
ACACATCAGCAGAAGACTTC+TGG	0.294886	2_1:-3671985	Msa0188480:CDS
AAAGGAATGTCTTCTGGATT+TGG	0.309038	2_1:-3673066	Msa0188480:CDS
CAGGATAAAGGAATGTCTTC+TGG	0.312649	2_1:-3673072	Msa0188480:CDS
CAATGAAGCTGGCCAGTTAC+TGG	0.321566	2_1:-3671287	Msa0188480:CDS
CGTCCCAGCCACGAATGTTC+AGG	0.321605	2_1:-3673731	Msa0188480:CDS
CCCTAGAGGATATTCATAAT+AGG	0.333261	2_1:-3672092	Msa0188480:CDS
TGCTGATCTTTCAGAGTAAC+AGG	0.337520	2_1:+3673522	None:intergenic
AAGACTGACAAAGGATTTAC+TGG	0.348700	2_1:-3672916	Msa0188480:CDS
TTTCATCGATTAATTTATTA+CGG	0.349579	2_1:+3671638	None:intergenic
TCATCATCCTTGAAAATCAT+TGG	0.359677	2_1:+3673819	None:intergenic
TGAGAAGGTTGCTCTTGATA+TGG	0.367111	2_1:-3673145	Msa0188480:CDS
ACGGTTACGGTTGATGTTCA+TGG	0.370566	2_1:-3673921	Msa0188480:CDS
ACCTCTGTCTGAACATGAAC+TGG	0.370605	2_1:-3671956	Msa0188480:CDS
TACCTCCTTGTATTTCGAAT+TGG	0.372784	2_1:-3673488	Msa0188480:CDS
CCATTTAAAGATGCAACATT+TGG	0.375280	2_1:+3671517	None:intergenic
CCAGAATTAAACGCTGCATT+AGG	0.375707	2_1:+3673675	None:intergenic
GAAGACTTTCTTGATGAATC+AGG	0.376060	2_1:-3672030	Msa0188480:CDS
TTTGGCTCCTCCGGTTGCTT+TGG	0.380888	2_1:-3673250	Msa0188480:CDS
AGGGTCACTGCTTCAAATTT+GGG	0.384662	2_1:-3672072	Msa0188480:CDS
GGCGGCTCAAACGGATCAAC+AGG	0.395999	2_1:+3673618	None:intergenic
CCTAGAGGATATTCATAATA+GGG	0.398060	2_1:-3672091	Msa0188480:CDS
TTACCACCATTTGTTGGAAT+GGG	0.398451	2_1:+3671592	None:intergenic
CTCTGAAAGATCAGCAGGAT+TGG	0.399790	2_1:-3673515	Msa0188480:CDS
AGGCTATTAAACCAGGATAA+AGG	0.404805	2_1:-3673084	Msa0188480:CDS
TTTACCACCATTTGTTGGAA+TGG	0.407256	2_1:+3671591	None:intergenic
GTCGAATATTCTTACGGTTA+CGG	0.408090	2_1:-3673934	Msa0188480:CDS
TGAAATGGTGGATGCTCAAC+TGG	0.409986	2_1:-3673799	Msa0188480:CDS
TTGCATCTTAAAGGTTCAAA+TGG	0.411084	2_1:-3671931	Msa0188480:CDS
TCCTGGTTCGCCTCCTGTGC+CGG	0.412048	2_1:-3673565	Msa0188480:CDS
TCATTATCAACATCCTTCTT+CGG	0.413809	2_1:+3672970	None:intergenic
TTGGCTCCTGAAAGTTGTAT+TGG	0.416836	2_1:-3671709	Msa0188480:CDS
AGAGCAGGAGTTGAGGGCTT+TGG	0.417560	2_1:-3673268	Msa0188480:CDS
CGTGAGAATATTTACAAAAT+GGG	0.418935	2_1:+3671176	None:intergenic
AAAGCTTTATCACTAGCAAT+TGG	0.419019	2_1:+3671484	None:intergenic
GATTGTGGTACATCGATATC+AGG	0.419626	2_1:-3671859	Msa0188480:CDS
CGGTTATGCATTCGCCTCCT+AGG	0.420451	2_1:-3673545	Msa0188480:CDS
TATCATTAATCTGAACCTCT+TGG	0.423226	2_1:+3673403	None:intergenic
CTAGGAGGCGAATGCATAAC+CGG	0.425860	2_1:+3673546	None:intergenic
AGCCAAGAAAATATCTTCTT+CGG	0.429208	2_1:-3671134	Msa0188480:CDS
AGCTGTTGCTATGAGGTCTA+AGG	0.432799	2_1:-3673328	Msa0188480:CDS
GTTGAGGGCTTTGGCTCCTC+CGG	0.435607	2_1:-3673259	Msa0188480:CDS
ATACTATTCCTCTCGATAAA+CGG	0.435880	2_1:-3673449	Msa0188480:CDS
CAGAAGACATTCCTTTATCC+TGG	0.436234	2_1:+3673073	None:intergenic
TCTGCTTTACCACCATTTGT+TGG	0.437216	2_1:+3671586	None:intergenic
TGTGTCAAAGTGGCATTAAA+AGG	0.437542	2_1:+3672003	None:intergenic
CGCCAAAATTTAAGCAAAAG+AGG	0.442302	2_1:-3673599	Msa0188480:CDS
CAAAAGCGTGCTGGGAGCTC+AGG	0.444723	2_1:+3671365	None:intergenic
CAGAGGTCATGTATGATGAT+AGG	0.446042	2_1:-3673104	Msa0188480:CDS
ATTTATCCTCAGCATACATC+TGG	0.446080	2_1:-3671673	Msa0188480:CDS
AGATTGATCTTACAGACAAA+AGG	0.451474	2_1:-3671396	Msa0188480:CDS
GTTGATACTGTCTTTGATTG+TGG	0.451790	2_1:-3671460	Msa0188480:CDS
AAGAATTGATCAAGACCAAA+TGG	0.455788	2_1:+3672823	None:intergenic
AATCTTGACCAAAAGCGTGC+TGG	0.461361	2_1:+3671356	None:intergenic
AGTGAAGAAGCTGATCCATT+TGG	0.462487	2_1:-3672838	Msa0188480:CDS
AAGGAAAGAGCAGGAGTTGA+GGG	0.463954	2_1:-3673274	Msa0188480:CDS
GAAGAGAAGGTTATATGCTA+AGG	0.464061	2_1:-3673223	Msa0188480:CDS
AGCGACTAGTGTTCCACTAT+TGG	0.465096	2_1:-3671728	Msa0188480:CDS
TGAAGGTGCAGGTGAGCAGC+TGG	0.467659	2_1:-3672941	Msa0188480:CDS
ACCGGCACAGGAGGCGAACC+AGG	0.470529	2_1:+3673564	None:intergenic
TGCTCAACTGGATGATGAAA+TGG	0.471665	2_1:-3673787	Msa0188480:CDS
GGAGAAGGAAAGGAAAGAGC+AGG	0.472476	2_1:-3673283	Msa0188480:CDS
ATCTTGACCAAAAGCGTGCT+GGG	0.473796	2_1:+3671357	None:intergenic
TTCTGAGGCTTTGTATGTCA+CGG	0.475405	2_1:-3673367	Msa0188480:CDS
GGAGGCGAACCAGGAGCCTT+AGG	0.476544	2_1:+3673573	None:intergenic
TAACACATTCCACACTATAC+AGG	0.480602	2_1:-3672993	Msa0188480:CDS
ATTCTTGACCGAGGTTAAGA+AGG	0.481935	2_1:-3672806	Msa0188480:CDS
TCCTCTCGATAAACGGTTGG+TGG	0.482506	2_1:-3673442	Msa0188480:CDS
TGCACTAAGTGCAATGAAGC+TGG	0.487683	2_1:-3671298	Msa0188480:CDS
CAACTTTCAGGAGCCAATAG+TGG	0.489748	2_1:+3671715	None:intergenic
TTCTGCTCAGTTGGACGCAA+AGG	0.490452	2_1:-3671212	Msa0188480:CDS
GATAAACGGTTGGTGGCTGA+TGG	0.493575	2_1:-3673435	Msa0188480:CDS
TGAATCTCAACCCAAACAAA+AGG	0.497868	2_1:-3671542	Msa0188480:CDS
ATCCCTGAACATTCGTGGCT+GGG	0.498460	2_1:+3673728	None:intergenic
CCTGGGTGATTCTGCTCAGT+TGG	0.498807	2_1:-3671221	Msa0188480:CDS
AATCCCTGAACATTCGTGGC+TGG	0.501083	2_1:+3673727	None:intergenic
TTAGAATCCCTGAACATTCG+TGG	0.502281	2_1:+3673723	None:intergenic
GTTGAGCCCATTCCAACAAA+TGG	0.505965	2_1:-3671598	Msa0188480:CDS
AGGTTATATGCTAAGGATGC+TGG	0.506126	2_1:-3673216	Msa0188480:CDS
CCCTATTATGAATATCCTCT+AGG	0.507168	2_1:+3672091	None:intergenic
GAGGGAGAAGGTTATTAGAA+TGG	0.507602	2_1:-3673649	Msa0188480:CDS
AATTGTATATACTCAGCATA+AGG	0.509199	2_1:-3673850	Msa0188480:CDS
GGCGAATGCATAACCGGCAC+AGG	0.512835	2_1:+3673552	None:intergenic
TGTTACTCTGAAAGATCAGC+AGG	0.517736	2_1:-3673520	Msa0188480:CDS
CACCTCCGACTCCGAGGGAT+AGG	0.518576	2_1:-3672876	Msa0188480:CDS
GATTGATCTTACAGACAAAA+GGG	0.518601	2_1:-3671395	Msa0188480:CDS
TCTTTCAGAGTAACAGGCCT+AGG	0.519400	2_1:+3673528	None:intergenic
GGTGACACAGCTGTGTATCA+AGG	0.521115	2_1:-3671838	Msa0188480:intron
GTGCAAGATTAATAGAGATA+AGG	0.522586	2_1:-3673181	Msa0188480:CDS
AAGAGGGTTCCTAAGGCTCC+TGG	0.522646	2_1:-3673582	Msa0188480:CDS
TAAGCAAAAGAGGGTTCCTA+AGG	0.523276	2_1:-3673589	Msa0188480:CDS
CACACTATACAGGCCGAAGA+AGG	0.524295	2_1:-3672983	Msa0188480:CDS
TCTTCACTCTCAAACTCTAC+TGG	0.527687	2_1:+3672853	None:intergenic
CTTCATTGCACTTAGTGCAA+AGG	0.529545	2_1:+3671302	None:intergenic
GCCGGGGTCGAATATTCTTA+CGG	0.530906	2_1:-3673940	Msa0188480:CDS
CATTAATCTGAACCTCTTGG+AGG	0.531400	2_1:+3673406	None:intergenic
CTTCTTACCCTTCTTAACCT+CGG	0.532663	2_1:+3672798	None:intergenic
AAAGGAAAGAGCAGGAGTTG+AGG	0.534656	2_1:-3673275	Msa0188480:CDS
AACTCTACTGGCCTATCCCT+CGG	0.535927	2_1:+3672865	None:intergenic
CCTATTATGAATATCCTCTA+GGG	0.536814	2_1:+3672092	None:intergenic
ATATGCTAAGGATGCTGGCA+TGG	0.537501	2_1:-3673211	Msa0188480:CDS
AACTACTACTTGCACATCGA+TGG	0.538531	2_1:-3671257	Msa0188480:CDS
CGAGGTTAAGAAGGGTAAGA+AGG	0.538731	2_1:-3672797	Msa0188480:CDS
TAATTCTGGTGCGAGGGAGA+AGG	0.539329	2_1:-3673661	Msa0188480:CDS
TCAAATTTGGGCCACTCCAG+TGG	0.540199	2_1:-3672060	Msa0188480:CDS
TCTGCTCAGTTGGACGCAAA+GGG	0.540731	2_1:-3671211	Msa0188480:CDS
TCGATTAATTTATTACGGCA+AGG	0.541079	2_1:+3671643	None:intergenic
AACGCTGCATTAGGTTGTGA+AGG	0.543593	2_1:+3673684	None:intergenic
GTCCCAGCCACGAATGTTCA+GGG	0.544845	2_1:-3673730	Msa0188480:CDS
AGGAATGAGAATTCGAAGCC+GGG	0.547383	2_1:-3673957	Msa0188480:CDS
TTCTTCCAATTCGAAATACA+AGG	0.549450	2_1:+3673483	None:intergenic
TTACTGGGGCTTCTGAAAGG+AGG	0.552702	2_1:-3672900	Msa0188480:CDS
AATATATCTCAAGATGATGC+TGG	0.556632	2_1:-3671886	Msa0188480:CDS
GCCAAAATTTAAGCAAAAGA+GGG	0.559676	2_1:-3673598	Msa0188480:CDS
AAGGAATGAGAATTCGAAGC+CGG	0.562412	2_1:-3673958	Msa0188480:CDS
TTGAGAAGATTGTTAATGTG+AGG	0.564064	2_1:-3673761	Msa0188480:CDS
GATTTACTGGGGCTTCTGAA+AGG	0.565864	2_1:-3672903	Msa0188480:CDS
AGAAAATATCTTCTTCGGCA+AGG	0.566575	2_1:-3671129	Msa0188480:CDS
TTCTTGACCGAGGTTAAGAA+GGG	0.567031	2_1:-3672805	Msa0188480:CDS
AATATCCGCTTGATATGGAA+AGG	0.570317	2_1:-3673977	None:intergenic
GGCCTATCCCTCGGAGTCGG+AGG	0.572160	2_1:+3672874	None:intergenic
GTTTGTATTAATGAATGTGA+TGG	0.576667	2_1:-3672117	Msa0188480:CDS
TATGCTAAGGATGCTGGCAT+GGG	0.577206	2_1:-3673210	Msa0188480:CDS
AGAGGAATAGTATAACCCTT+CGG	0.579583	2_1:+3673459	None:intergenic
ATAAACGGTTGGTGGCTGAT+GGG	0.580165	2_1:-3673434	Msa0188480:CDS
TCCAGTTCATGTTCAGACAG+AGG	0.585485	2_1:+3671955	None:intergenic
TATTCCTCTCGATAAACGGT+TGG	0.585496	2_1:-3673445	Msa0188480:CDS
TTCGAATTGGAAGAATCCGA+AGG	0.585879	2_1:-3673475	Msa0188480:CDS
GATATGGCTTATACTAAGCA+AGG	0.588614	2_1:-3673129	Msa0188480:CDS
CTTCTTCGGCCTGTATAGTG+TGG	0.589214	2_1:+3672984	None:intergenic
AGCGTTTAATTCTGGTGCGA+GGG	0.589471	2_1:-3673667	Msa0188480:CDS
TCGAATTGGAAGAATCCGAA+GGG	0.589962	2_1:-3673474	Msa0188480:CDS
TTTCAAGGATGATGAAATGG+TGG	0.590406	2_1:-3673811	Msa0188480:CDS
CTAGAGAAGCTGTTGCTATG+AGG	0.591332	2_1:-3673335	Msa0188480:CDS
TATGAGGTCTAAGGTTCAGA+AGG	0.591457	2_1:-3673319	Msa0188480:CDS
TACTGGGGCTTCTGAAAGGA+GGG	0.594403	2_1:-3672899	Msa0188480:CDS
CGGTTGGTGGCTGATGGGAG+AGG	0.594669	2_1:-3673429	Msa0188480:CDS
GGATCGTGATATAAGTGAGA+AGG	0.595467	2_1:-3673160	Msa0188480:CDS
TTGCTTTGGAAAAGAAGAGA+AGG	0.595483	2_1:-3673236	Msa0188480:CDS
CAGCGTTTAATTCTGGTGCG+AGG	0.595966	2_1:-3673668	Msa0188480:CDS
ACTGGCCTATCCCTCGGAGT+CGG	0.596065	2_1:+3672871	None:intergenic
TTTGTATGTCACGGAGCAGA+CGG	0.600099	2_1:-3673358	Msa0188480:CDS
GTTGATAATGAAGCTTATGA+AGG	0.600869	2_1:-3672958	Msa0188480:CDS
AGACTGACAAAGGATTTACT+GGG	0.602888	2_1:-3672915	Msa0188480:CDS
AATGAAGCTTATGAAGGTGC+AGG	0.603217	2_1:-3672952	Msa0188480:CDS
TAAGAAGGGTAAGAAGGCCA+TGG	0.606762	2_1:-3672791	Msa0188480:CDS
GAATGCATAACCGGCACAGG+AGG	0.607303	2_1:+3673555	None:intergenic
CAGCTGGAGAAGACTGACAA+AGG	0.616633	2_1:-3672925	Msa0188480:CDS
TGATGATAGGCTATTAAACC+AGG	0.619758	2_1:-3673091	Msa0188480:CDS
GGAGGGCACCTCCGACTCCG+AGG	0.620724	2_1:-3672882	Msa0188480:CDS
TTCAGAGTAACAGGCCTAGG+AGG	0.630794	2_1:+3673531	None:intergenic
TCTTGATCAATTCTTGACCG+AGG	0.636173	2_1:-3672815	Msa0188480:CDS
GATGATGCTGGTAATGATTG+TGG	0.637016	2_1:-3671874	Msa0188480:CDS
GAGGGCACCTCCGACTCCGA+GGG	0.640965	2_1:-3672881	Msa0188480:CDS
GAGCCCATTCCAACAAATGG+TGG	0.646732	2_1:-3671595	Msa0188480:CDS
GCCACCAACCGTTTATCGAG+AGG	0.652499	2_1:+3673441	None:intergenic
CTTCTGCTGATGTGTCAAAG+TGG	0.659886	2_1:+3671993	None:intergenic
CCAACTGAGCAGAATCACCC+AGG	0.666150	2_1:+3671221	None:intergenic
ACCGTAAGAATATTCGACCC+CGG	0.679065	2_1:+3673939	None:intergenic
TGTGGAATGTGTTAGTTGTG+CGG	0.681379	2_1:+3673002	None:intergenic
TCAACTCCAGATGTATGCTG+AGG	0.682290	2_1:+3671667	None:intergenic
GGAATGAGAATTCGAAGCCG+GGG	0.688805	2_1:-3673956	Msa0188480:CDS
GACTGACAAAGGATTTACTG+GGG	0.697683	2_1:-3672914	Msa0188480:CDS
CCAGCAATGACTAAGCCAAG+AGG	0.707456	2_1:-3671331	Msa0188480:CDS
TGAATGTGATGGATCCCTAG+AGG	0.708027	2_1:-3672106	Msa0188480:CDS
TGATGGGAGAGGCCTCCAAG+AGG	0.711357	2_1:-3673418	Msa0188480:CDS
TTCCAATTCGAAATACAAGG+AGG	0.713902	2_1:+3673486	None:intergenic
TTATACTAAGCAAGGCACAG+AGG	0.741448	2_1:-3673121	Msa0188480:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAGAAAAATCGAAATATA+AGG	+	chr2_1:3672698-3672717	None:intergenic	15.0%
!!!	TTTCATCGATTAATTTATTA+CGG	+	chr2_1:3673430-3673449	None:intergenic	15.0%
!!!	TTATGTTATTTATCTTTCCA+TGG	-	chr2_1:3672478-3672497	Msa0188480:intron	20.0%
!!	TATTTCACATACATAGTATT+TGG	-	chr2_1:3672581-3672600	Msa0188480:intron	20.0%
!!!	ATAACGATTAATATTTTTCG+AGG	+	chr2_1:3672658-3672677	None:intergenic	20.0%
!!	AGAAATAAGCAATTATTATC+AGG	+	chr2_1:3672892-3672911	None:intergenic	20.0%
!!!	AATAATTGCTTATTTCTAAG+AGG	-	chr2_1:3672895-3672914	Msa0188480:CDS	20.0%
!	AATTGTATATACTCAGCATA+AGG	-	chr2_1:3671215-3671234	Msa0188480:CDS	25.0%
!!	TTTGATACCAATGATTTTCA+AGG	-	chr2_1:3671239-3671258	Msa0188480:CDS	25.0%
!!!	CATGATAATAATTAGCCTTT+TGG	+	chr2_1:3672409-3672428	None:intergenic	25.0%
!	CTAATTATTATCATGCTATG+TGG	-	chr2_1:3672414-3672433	Msa0188480:intron	25.0%
!!	TAGCTTTCTTTAAAAAGAGT+AGG	-	chr2_1:3672734-3672753	Msa0188480:intron	25.0%
!	TTCAGTGTCTTTAATATTAG+AGG	-	chr2_1:3672837-3672856	Msa0188480:CDS	25.0%
!	GTAAACATTCTTTCAAACAT+TGG	+	chr2_1:3672870-3672889	None:intergenic	25.0%
!	GTTTGTATTAATGAATGTGA+TGG	-	chr2_1:3672948-3672967	Msa0188480:CDS	25.0%
!	CGTGAGAATATTTACAAAAT+GGG	+	chr2_1:3673892-3673911	None:intergenic	25.0%
	TCATCATCCTTGAAAATCAT+TGG	+	chr2_1:3671249-3671268	None:intergenic	30.0%
!!	GATTTTCAAGGATGATGAAA+TGG	-	chr2_1:3671251-3671270	Msa0188480:CDS	30.0%
	TTGAGAAGATTGTTAATGTG+AGG	-	chr2_1:3671304-3671323	Msa0188480:CDS	30.0%
!	CTCTTTTGCTTAAATTTTGG+CGG	+	chr2_1:3671468-3671487	None:intergenic	30.0%
	GCCAAAATTTAAGCAAAAGA+GGG	-	chr2_1:3671467-3671486	Msa0188480:CDS	30.0%
!	ACCCTCTTTTGCTTAAATTT+TGG	+	chr2_1:3671471-3671490	None:intergenic	30.0%
	TTCTTCCAATTCGAAATACA+AGG	+	chr2_1:3671585-3671604	None:intergenic	30.0%
	ATACTATTCCTCTCGATAAA+CGG	-	chr2_1:3671616-3671635	Msa0188480:CDS	30.0%
	TATCATTAATCTGAACCTCT+TGG	+	chr2_1:3671665-3671684	None:intergenic	30.0%
!	TAATTTTGCTAAGCTTTCTG+AGG	-	chr2_1:3671683-3671702	Msa0188480:CDS	30.0%
!	TCAGAAGGAAATTCTTTTGA+AGG	-	chr2_1:3671761-3671780	Msa0188480:intron	30.0%
	GTGCAAGATTAATAGAGATA+AGG	-	chr2_1:3671884-3671903	Msa0188480:CDS	30.0%
	TCATTATCAACATCCTTCTT+CGG	+	chr2_1:3672098-3672117	None:intergenic	30.0%
!!	GTTGATAATGAAGCTTATGA+AGG	-	chr2_1:3672107-3672126	Msa0188480:CDS	30.0%
	AAGAATTGATCAAGACCAAA+TGG	+	chr2_1:3672245-3672264	None:intergenic	30.0%
	GTAGGTTATTCCAAACAAAT+CGG	-	chr2_1:3672752-3672771	Msa0188480:intron	30.0%
	TAGGTTATTCCAAACAAATC+GGG	-	chr2_1:3672753-3672772	Msa0188480:intron	30.0%
	GTGTCTTTAATATTAGAGGA+TGG	-	chr2_1:3672841-3672860	Msa0188480:CDS	30.0%
!!	GCTTATTTCTAAGAGGAATA+AGG	-	chr2_1:3672902-3672921	Msa0188480:CDS	30.0%
	CCTATTATGAATATCCTCTA+GGG	+	chr2_1:3672976-3672995	None:intergenic	30.0%
	CCTAGAGGATATTCATAATA+GGG	-	chr2_1:3672974-3672993	Msa0188480:CDS	30.0%
	TTGCATCTTAAAGGTTCAAA+TGG	-	chr2_1:3673134-3673153	Msa0188480:CDS	30.0%
	AATATATCTCAAGATGATGC+TGG	-	chr2_1:3673179-3673198	Msa0188480:CDS	30.0%
	ATCTTAATCTCGTAGTGAAA+AGG	-	chr2_1:3673255-3673274	Msa0188480:CDS	30.0%
	TTCATACCAATACAACTTTC+AGG	+	chr2_1:3673365-3673384	None:intergenic	30.0%
	TCGATTAATTTATTACGGCA+AGG	+	chr2_1:3673425-3673444	None:intergenic	30.0%
!!	ACATTTGGTTCCTTTTGTTT+GGG	+	chr2_1:3673536-3673555	None:intergenic	30.0%
!!	AACATTTGGTTCCTTTTGTT+TGG	+	chr2_1:3673537-3673556	None:intergenic	30.0%
	CCATTTAAAGATGCAACATT+TGG	+	chr2_1:3673551-3673570	None:intergenic	30.0%
	CCAAATGTTGCATCTTTAAA+TGG	-	chr2_1:3673548-3673567	Msa0188480:CDS	30.0%
!	AAAGCTTTATCACTAGCAAT+TGG	+	chr2_1:3673584-3673603	None:intergenic	30.0%
	AGATTGATCTTACAGACAAA+AGG	-	chr2_1:3673669-3673688	Msa0188480:CDS	30.0%
	GATTGATCTTACAGACAAAA+GGG	-	chr2_1:3673670-3673689	Msa0188480:CDS	30.0%
!!	TAGTTTTACAAACCAGTAAC+TGG	+	chr2_1:3673793-3673812	None:intergenic	30.0%
	GCGTGAGAATATTTACAAAA+TGG	+	chr2_1:3673893-3673912	None:intergenic	30.0%
	AGCCAAGAAAATATCTTCTT+CGG	-	chr2_1:3673931-3673950	Msa0188480:CDS	30.0%
	GTCGAATATTCTTACGGTTA+CGG	-	chr2_1:3671131-3671150	Msa0188480:CDS	35.0%
	TTTCAAGGATGATGAAATGG+TGG	-	chr2_1:3671254-3671273	Msa0188480:CDS	35.0%
!!	TTAAATTTTGGCGGCTCAAA+CGG	+	chr2_1:3671459-3671478	None:intergenic	35.0%
	CGCCAAAATTTAAGCAAAAG+AGG	-	chr2_1:3671466-3671485	Msa0188480:CDS	35.0%
	TACCTCCTTGTATTTCGAAT+TGG	-	chr2_1:3671577-3671596	Msa0188480:CDS	35.0%
	TTCCAATTCGAAATACAAGG+AGG	+	chr2_1:3671582-3671601	None:intergenic	35.0%
	AGAGGAATAGTATAACCCTT+CGG	+	chr2_1:3671609-3671628	None:intergenic	35.0%
!!	GGAAATTCTTTTGAAGGAGA+AGG	-	chr2_1:3671767-3671786	Msa0188480:intron	35.0%
!!	TTCTTTTGAAGGAGAAGGAA+AGG	-	chr2_1:3671772-3671791	Msa0188480:intron	35.0%
!!	TTGCTTTGGAAAAGAAGAGA+AGG	-	chr2_1:3671829-3671848	Msa0188480:intron	35.0%
	GAAGAGAAGGTTATATGCTA+AGG	-	chr2_1:3671842-3671861	Msa0188480:CDS	35.0%
	GATATGGCTTATACTAAGCA+AGG	-	chr2_1:3671936-3671955	Msa0188480:CDS	35.0%
	TGATGATAGGCTATTAAACC+AGG	-	chr2_1:3671974-3671993	Msa0188480:CDS	35.0%
	AGGCTATTAAACCAGGATAA+AGG	-	chr2_1:3671981-3672000	Msa0188480:CDS	35.0%
	AAAGGAATGTCTTCTGGATT+TGG	-	chr2_1:3671999-3672018	Msa0188480:CDS	35.0%
	TAACACATTCCACACTATAC+AGG	-	chr2_1:3672072-3672091	Msa0188480:CDS	35.0%
	AAGACTGACAAAGGATTTAC+TGG	-	chr2_1:3672149-3672168	Msa0188480:CDS	35.0%
	AGACTGACAAAGGATTTACT+GGG	-	chr2_1:3672150-3672169	Msa0188480:CDS	35.0%
	ACTATCTCGCATTGAAGATA+CGG	+	chr2_1:3672325-3672344	None:intergenic	35.0%
	AACATTGCATTTCACTTCCA+TGG	+	chr2_1:3672498-3672517	None:intergenic	35.0%
	CCCTAGAGGATATTCATAAT+AGG	-	chr2_1:3672973-3672992	Msa0188480:CDS	35.0%
	CCCTATTATGAATATCCTCT+AGG	+	chr2_1:3672977-3672996	None:intergenic	35.0%
!!	AAAGTCTTCATTTTGACCAC+TGG	+	chr2_1:3673024-3673043	None:intergenic	35.0%
	GAAGACTTTCTTGATGAATC+AGG	-	chr2_1:3673035-3673054	Msa0188480:CDS	35.0%
	TGTGTCAAAGTGGCATTAAA+AGG	+	chr2_1:3673065-3673084	None:intergenic	35.0%
	GAACTGGATTTGCATCTTAA+AGG	-	chr2_1:3673125-3673144	Msa0188480:CDS	35.0%
!	TCTTGATAAGAAGTGCAACA+AGG	-	chr2_1:3673292-3673311	Msa0188480:CDS	35.0%
!	CTTGATAAGAAGTGCAACAA+GGG	-	chr2_1:3673293-3673312	Msa0188480:CDS	35.0%
	ATTTATCCTCAGCATACATC+TGG	-	chr2_1:3673392-3673411	Msa0188480:CDS	35.0%
!	TTACCACCATTTGTTGGAAT+GGG	+	chr2_1:3673476-3673495	None:intergenic	35.0%
!	TTTACCACCATTTGTTGGAA+TGG	+	chr2_1:3673477-3673496	None:intergenic	35.0%
	TGAATCTCAACCCAAACAAA+AGG	-	chr2_1:3673523-3673542	Msa0188480:CDS	35.0%
	GTTGATACTGTCTTTGATTG+TGG	-	chr2_1:3673605-3673624	Msa0188480:CDS	35.0%
!	TGCCGAAGAAGATATTTTCT+TGG	+	chr2_1:3673936-3673955	None:intergenic	35.0%
	AGAAAATATCTTCTTCGGCA+AGG	-	chr2_1:3673936-3673955	Msa0188480:CDS	35.0%
	AAGGAATGAGAATTCGAAGC+CGG	-	chr2_1:3671107-3671126	Msa0188480:CDS	40.0%
	TGCTCAACTGGATGATGAAA+TGG	-	chr2_1:3671278-3671297	Msa0188480:CDS	40.0%
	TTAGAATCCCTGAACATTCG+TGG	+	chr2_1:3671345-3671364	None:intergenic	40.0%
	CCAGAATTAAACGCTGCATT+AGG	+	chr2_1:3671393-3671412	None:intergenic	40.0%
	CCTAATGCAGCGTTTAATTC+TGG	-	chr2_1:3671390-3671409	Msa0188480:CDS	40.0%
	GAGGGAGAAGGTTATTAGAA+TGG	-	chr2_1:3671416-3671435	Msa0188480:CDS	40.0%
	TAAGCAAAAGAGGGTTCCTA+AGG	-	chr2_1:3671476-3671495	Msa0188480:CDS	40.0%
	TGCTGATCTTTCAGAGTAAC+AGG	+	chr2_1:3671546-3671565	None:intergenic	40.0%
!	TGTTACTCTGAAAGATCAGC+AGG	-	chr2_1:3671545-3671564	Msa0188480:CDS	40.0%
	TTCGAATTGGAAGAATCCGA+AGG	-	chr2_1:3671590-3671609	Msa0188480:CDS	40.0%
	TCGAATTGGAAGAATCCGAA+GGG	-	chr2_1:3671591-3671610	Msa0188480:CDS	40.0%
	TATTCCTCTCGATAAACGGT+TGG	-	chr2_1:3671620-3671639	Msa0188480:CDS	40.0%
	CATTAATCTGAACCTCTTGG+AGG	+	chr2_1:3671662-3671681	None:intergenic	40.0%
!!	TTCTGAGGCTTTGTATGTCA+CGG	-	chr2_1:3671698-3671717	Msa0188480:CDS	40.0%
!	TATGAGGTCTAAGGTTCAGA+AGG	-	chr2_1:3671746-3671765	Msa0188480:intron	40.0%
!	CTCTTCTTTTCCAAAGCAAC+CGG	+	chr2_1:3671828-3671847	None:intergenic	40.0%
	AGGTTATATGCTAAGGATGC+TGG	-	chr2_1:3671849-3671868	Msa0188480:CDS	40.0%
	GGATCGTGATATAAGTGAGA+AGG	-	chr2_1:3671905-3671924	Msa0188480:CDS	40.0%
	TGAGAAGGTTGCTCTTGATA+TGG	-	chr2_1:3671920-3671939	Msa0188480:CDS	40.0%
	TTATACTAAGCAAGGCACAG+AGG	-	chr2_1:3671944-3671963	Msa0188480:CDS	40.0%
	CAGAGGTCATGTATGATGAT+AGG	-	chr2_1:3671961-3671980	Msa0188480:CDS	40.0%
	CAGAAGACATTCCTTTATCC+TGG	+	chr2_1:3671995-3672014	None:intergenic	40.0%
	CAGGATAAAGGAATGTCTTC+TGG	-	chr2_1:3671993-3672012	Msa0188480:CDS	40.0%
	TGTGGAATGTGTTAGTTGTG+CGG	+	chr2_1:3672066-3672085	None:intergenic	40.0%
!	AATGAAGCTTATGAAGGTGC+AGG	-	chr2_1:3672113-3672132	Msa0188480:CDS	40.0%
	GACTGACAAAGGATTTACTG+GGG	-	chr2_1:3672151-3672170	Msa0188480:CDS	40.0%
	TCTTCACTCTCAAACTCTAC+TGG	+	chr2_1:3672215-3672234	None:intergenic	40.0%
	AGTGAAGAAGCTGATCCATT+TGG	-	chr2_1:3672227-3672246	Msa0188480:intron	40.0%
	TCTTGATCAATTCTTGACCG+AGG	-	chr2_1:3672250-3672269	Msa0188480:intron	40.0%
	ATTCTTGACCGAGGTTAAGA+AGG	-	chr2_1:3672259-3672278	Msa0188480:intron	40.0%
	TTCTTGACCGAGGTTAAGAA+GGG	-	chr2_1:3672260-3672279	Msa0188480:intron	40.0%
	CTTCTTACCCTTCTTAACCT+CGG	+	chr2_1:3672270-3672289	None:intergenic	40.0%
	AAGAAGGCCATGGAAAATGT+AGG	-	chr2_1:3672284-3672303	Msa0188480:intron	40.0%
!!	TCAATGCGAGATAGTTCTGA+TGG	-	chr2_1:3672330-3672349	Msa0188480:intron	40.0%
	ACTCGCATTGGGTTTGAAAA+AGG	-	chr2_1:3672366-3672385	Msa0188480:intron	40.0%
	CTCGCATTGGGTTTGAAAAA+GGG	-	chr2_1:3672367-3672386	Msa0188480:intron	40.0%
!!	AAAAAGGGCGTTAAGCAGAT+CGG	-	chr2_1:3672382-3672401	Msa0188480:intron	40.0%
	TAGGGTCACTGCTTCAAATT+TGG	-	chr2_1:3672992-3673011	Msa0188480:CDS	40.0%
	AGGGTCACTGCTTCAAATTT+GGG	-	chr2_1:3672993-3673012	Msa0188480:CDS	40.0%
!	GATGATGCTGGTAATGATTG+TGG	-	chr2_1:3673191-3673210	Msa0188480:CDS	40.0%
	GATTGTGGTACATCGATATC+AGG	-	chr2_1:3673206-3673225	Msa0188480:CDS	40.0%
	CAACAAGGGTGGTTAATTAC+TGG	-	chr2_1:3673307-3673326	Msa0188480:CDS	40.0%
	TTGGCTCCTGAAAGTTGTAT+TGG	-	chr2_1:3673356-3673375	Msa0188480:CDS	40.0%
	TCTGCTTTACCACCATTTGT+TGG	+	chr2_1:3673482-3673501	None:intergenic	40.0%
	CTTCATTGCACTTAGTGCAA+AGG	+	chr2_1:3673766-3673785	None:intergenic	40.0%
	AACTACTACTTGCACATCGA+TGG	-	chr2_1:3673808-3673827	Msa0188480:CDS	40.0%
	ATGGTGCATAAAAACTGCCT+GGG	-	chr2_1:3673827-3673846	Msa0188480:CDS	40.0%
	AGGAATGAGAATTCGAAGCC+GGG	-	chr2_1:3671108-3671127	Msa0188480:CDS	45.0%
	ACCGTAAGAATATTCGACCC+CGG	+	chr2_1:3671129-3671148	None:intergenic	45.0%
!	ACGGTTACGGTTGATGTTCA+TGG	-	chr2_1:3671144-3671163	Msa0188480:CDS	45.0%
!!	TGAAATGGTGGATGCTCAAC+TGG	-	chr2_1:3671266-3671285	Msa0188480:CDS	45.0%
!	AACGCTGCATTAGGTTGTGA+AGG	+	chr2_1:3671384-3671403	None:intergenic	45.0%
	AGCGTTTAATTCTGGTGCGA+GGG	-	chr2_1:3671398-3671417	Msa0188480:CDS	45.0%
	TCTTTCAGAGTAACAGGCCT+AGG	+	chr2_1:3671540-3671559	None:intergenic	45.0%
!	CTCTGAAAGATCAGCAGGAT+TGG	-	chr2_1:3671550-3671569	Msa0188480:CDS	45.0%
!!	ATAAACGGTTGGTGGCTGAT+GGG	-	chr2_1:3671631-3671650	Msa0188480:CDS	45.0%
	TTTGTATGTCACGGAGCAGA+CGG	-	chr2_1:3671707-3671726	Msa0188480:CDS	45.0%
	CTAGAGAAGCTGTTGCTATG+AGG	-	chr2_1:3671730-3671749	Msa0188480:intron	45.0%
	AGCTGTTGCTATGAGGTCTA+AGG	-	chr2_1:3671737-3671756	Msa0188480:intron	45.0%
	AAAGGAAAGAGCAGGAGTTG+AGG	-	chr2_1:3671790-3671809	Msa0188480:intron	45.0%
	AAGGAAAGAGCAGGAGTTGA+GGG	-	chr2_1:3671791-3671810	Msa0188480:intron	45.0%
!	TTCTTTTCCAAAGCAACCGG+AGG	+	chr2_1:3671825-3671844	None:intergenic	45.0%
	ATATGCTAAGGATGCTGGCA+TGG	-	chr2_1:3671854-3671873	Msa0188480:CDS	45.0%
	TATGCTAAGGATGCTGGCAT+GGG	-	chr2_1:3671855-3671874	Msa0188480:CDS	45.0%
	GATTTACTGGGGCTTCTGAA+AGG	-	chr2_1:3672162-3672181	Msa0188480:intron	45.0%
	CGAGGTTAAGAAGGGTAAGA+AGG	-	chr2_1:3672268-3672287	Msa0188480:intron	45.0%
	TAAGAAGGGTAAGAAGGCCA+TGG	-	chr2_1:3672274-3672293	Msa0188480:intron	45.0%
	AAGGCCATGGAAAATGTAGG+TGG	-	chr2_1:3672287-3672306	Msa0188480:intron	45.0%
	AGGCCATGGAAAATGTAGGT+GGG	-	chr2_1:3672288-3672307	Msa0188480:intron	45.0%
!!	ATGCGAGATAGTTCTGATGG+AGG	-	chr2_1:3672333-3672352	Msa0188480:intron	45.0%
!!	GATAGTTCTGATGGAGGTTC+TGG	-	chr2_1:3672339-3672358	Msa0188480:intron	45.0%
	GTTAAGCAGATCGGTCCAAA+AGG	-	chr2_1:3672391-3672410	Msa0188480:intron	45.0%
!	CAGTATGAGCCCGATTTGTT+TGG	+	chr2_1:3672765-3672784	None:intergenic	45.0%
	CAAACAAATCGGGCTCATAC+TGG	-	chr2_1:3672763-3672782	Msa0188480:intron	45.0%
	TCCACTTGCACAGAAGACAA+GGG	-	chr2_1:3672802-3672821	Msa0188480:CDS	45.0%
!!	TGAATGTGATGGATCCCTAG+AGG	-	chr2_1:3672959-3672978	Msa0188480:CDS	45.0%
!!	CTTCATTTTGACCACTGGAG+TGG	+	chr2_1:3673019-3673038	None:intergenic	45.0%
	CTTCTGCTGATGTGTCAAAG+TGG	+	chr2_1:3673075-3673094	None:intergenic	45.0%
	ACACATCAGCAGAAGACTTC+TGG	-	chr2_1:3673080-3673099	Msa0188480:CDS	45.0%
	ACCTCTGTCTGAACATGAAC+TGG	-	chr2_1:3673109-3673128	Msa0188480:CDS	45.0%
	TCCAGTTCATGTTCAGACAG+AGG	+	chr2_1:3673113-3673132	None:intergenic	45.0%
!	CGTAGTGAAAAGGCGCAAAA+AGG	-	chr2_1:3673265-3673284	Msa0188480:CDS	45.0%
!	GATAAGAAGTGCAACAAGGG+TGG	-	chr2_1:3673296-3673315	Msa0188480:CDS	45.0%
	AGCGACTAGTGTTCCACTAT+TGG	-	chr2_1:3673337-3673356	Msa0188480:CDS	45.0%
	CAACTTTCAGGAGCCAATAG+TGG	+	chr2_1:3673353-3673372	None:intergenic	45.0%
	TCAACTCCAGATGTATGCTG+AGG	+	chr2_1:3673401-3673420	None:intergenic	45.0%
	GTTGAGCCCATTCCAACAAA+TGG	-	chr2_1:3673467-3673486	Msa0188480:CDS	45.0%
!	ATCTTGACCAAAAGCGTGCT+GGG	+	chr2_1:3673711-3673730	None:intergenic	45.0%
!	AATCTTGACCAAAAGCGTGC+TGG	+	chr2_1:3673712-3673731	None:intergenic	45.0%
!!	GTGCAAAGGTTTTGTCCTCT+TGG	+	chr2_1:3673752-3673771	None:intergenic	45.0%
	TGCACTAAGTGCAATGAAGC+TGG	-	chr2_1:3673767-3673786	Msa0188480:CDS	45.0%
	GATGGTGCATAAAAACTGCC+TGG	-	chr2_1:3673826-3673845	Msa0188480:CDS	45.0%
	GGAATGAGAATTCGAAGCCG+GGG	-	chr2_1:3671109-3671128	Msa0188480:CDS	50.0%
	GCCGGGGTCGAATATTCTTA+CGG	-	chr2_1:3671125-3671144	Msa0188480:CDS	50.0%
	ATCCCTGAACATTCGTGGCT+GGG	+	chr2_1:3671340-3671359	None:intergenic	50.0%
	AATCCCTGAACATTCGTGGC+TGG	+	chr2_1:3671341-3671360	None:intergenic	50.0%
	CAGCGTTTAATTCTGGTGCG+AGG	-	chr2_1:3671397-3671416	Msa0188480:CDS	50.0%
	TAATTCTGGTGCGAGGGAGA+AGG	-	chr2_1:3671404-3671423	Msa0188480:CDS	50.0%
	CTAGGAGGCGAATGCATAAC+CGG	+	chr2_1:3671522-3671541	None:intergenic	50.0%
	TTCAGAGTAACAGGCCTAGG+AGG	+	chr2_1:3671537-3671556	None:intergenic	50.0%
	TCCTCTCGATAAACGGTTGG+TGG	-	chr2_1:3671623-3671642	Msa0188480:CDS	50.0%
!!	GATAAACGGTTGGTGGCTGA+TGG	-	chr2_1:3671630-3671649	Msa0188480:CDS	50.0%
	GGAGAAGGAAAGGAAAGAGC+AGG	-	chr2_1:3671782-3671801	Msa0188480:intron	50.0%
	CTTCTTCGGCCTGTATAGTG+TGG	+	chr2_1:3672084-3672103	None:intergenic	50.0%
	CACACTATACAGGCCGAAGA+AGG	-	chr2_1:3672082-3672101	Msa0188480:CDS	50.0%
	CAGCTGGAGAAGACTGACAA+AGG	-	chr2_1:3672140-3672159	Msa0188480:CDS	50.0%
!	TTACTGGGGCTTCTGAAAGG+AGG	-	chr2_1:3672165-3672184	Msa0188480:intron	50.0%
!	TACTGGGGCTTCTGAAAGGA+GGG	-	chr2_1:3672166-3672185	Msa0188480:intron	50.0%
!	AACTCTACTGGCCTATCCCT+CGG	+	chr2_1:3672203-3672222	None:intergenic	50.0%
	GGCCATGGAAAATGTAGGTG+GGG	-	chr2_1:3672289-3672308	Msa0188480:intron	50.0%
	GCCATGGAAAATGTAGGTGG+GGG	-	chr2_1:3672290-3672309	Msa0188480:intron	50.0%
	CCATGGAAAATGTAGGTGGG+GGG	-	chr2_1:3672291-3672310	Msa0188480:intron	50.0%
	CTCATACTGGCGAATGCGAT+GGG	-	chr2_1:3672776-3672795	Msa0188480:intron	50.0%
	CTCCACTTGCACAGAAGACA+AGG	-	chr2_1:3672801-3672820	Msa0188480:CDS	50.0%
	TCCCTTGTCTTCTGTGCAAG+TGG	+	chr2_1:3672806-3672825	None:intergenic	50.0%
	TCAAATTTGGGCCACTCCAG+TGG	-	chr2_1:3673005-3673024	Msa0188480:CDS	50.0%
	GGTGACACAGCTGTGTATCA+AGG	-	chr2_1:3673227-3673246	Msa0188480:CDS	50.0%
	GAGCCCATTCCAACAAATGG+TGG	-	chr2_1:3673470-3673489	Msa0188480:CDS	50.0%
	CCTCTTGGCTTAGTCATTGC+TGG	+	chr2_1:3673737-3673756	None:intergenic	50.0%
	CCAGCAATGACTAAGCCAAG+AGG	-	chr2_1:3673734-3673753	Msa0188480:CDS	50.0%
	CAATGAAGCTGGCCAGTTAC+TGG	-	chr2_1:3673778-3673797	Msa0188480:CDS	50.0%
	TTCTGCTCAGTTGGACGCAA+AGG	-	chr2_1:3673853-3673872	Msa0188480:CDS	50.0%
	TCTGCTCAGTTGGACGCAAA+GGG	-	chr2_1:3673854-3673873	Msa0188480:CDS	50.0%
	GTCCCAGCCACGAATGTTCA+GGG	-	chr2_1:3671335-3671354	Msa0188480:CDS	55.0%
	AAGAGGGTTCCTAAGGCTCC+TGG	-	chr2_1:3671483-3671502	Msa0188480:CDS	55.0%
	GAATGCATAACCGGCACAGG+AGG	+	chr2_1:3671513-3671532	None:intergenic	55.0%
	CGGTTATGCATTCGCCTCCT+AGG	-	chr2_1:3671520-3671539	Msa0188480:CDS	55.0%
	GCCACCAACCGTTTATCGAG+AGG	+	chr2_1:3671627-3671646	None:intergenic	55.0%
	AGAGCAGGAGTTGAGGGCTT+TGG	-	chr2_1:3671797-3671816	Msa0188480:intron	55.0%
!	TTTGGCTCCTCCGGTTGCTT+TGG	-	chr2_1:3671815-3671834	Msa0188480:intron	55.0%
!	CCCCCCACCTACATTTTCCA+TGG	+	chr2_1:3672294-3672313	None:intergenic	55.0%
!	GTTCTGATGGAGGTTCTGGC+AGG	-	chr2_1:3672343-3672362	Msa0188480:intron	55.0%
	GTTCTGGCAGGACTCGCATT+GGG	-	chr2_1:3672355-3672374	Msa0188480:intron	55.0%
	GCTCATACTGGCGAATGCGA+TGG	-	chr2_1:3672775-3672794	Msa0188480:intron	55.0%
	CCAACTGAGCAGAATCACCC+AGG	+	chr2_1:3673847-3673866	None:intergenic	55.0%
	CCTGGGTGATTCTGCTCAGT+TGG	-	chr2_1:3673844-3673863	Msa0188480:CDS	55.0%
	CGTCCCAGCCACGAATGTTC+AGG	-	chr2_1:3671334-3671353	Msa0188480:CDS	60.0%
	GGCGGCTCAAACGGATCAAC+AGG	+	chr2_1:3671450-3671469	None:intergenic	60.0%
	GGCGAATGCATAACCGGCAC+AGG	+	chr2_1:3671516-3671535	None:intergenic	60.0%
	TGATGGGAGAGGCCTCCAAG+AGG	-	chr2_1:3671647-3671666	Msa0188480:CDS	60.0%
!	GTTGAGGGCTTTGGCTCCTC+CGG	-	chr2_1:3671806-3671825	Msa0188480:intron	60.0%
!	TGAAGGTGCAGGTGAGCAGC+TGG	-	chr2_1:3672124-3672143	Msa0188480:CDS	60.0%
!	ACTGGCCTATCCCTCGGAGT+CGG	+	chr2_1:3672197-3672216	None:intergenic	60.0%
!	GGTTCTGGCAGGACTCGCAT+TGG	-	chr2_1:3672354-3672373	Msa0188480:intron	60.0%
!	CAAAAGCGTGCTGGGAGCTC+AGG	+	chr2_1:3673703-3673722	None:intergenic	60.0%
!	CTGAGCTCCCAGCACGCTTT+TGG	-	chr2_1:3673701-3673720	Msa0188480:CDS	60.0%
	GGAGGCGAACCAGGAGCCTT+AGG	+	chr2_1:3671495-3671514	None:intergenic	65.0%
!	TCCTGGTTCGCCTCCTGTGC+CGG	-	chr2_1:3671500-3671519	Msa0188480:CDS	65.0%
!!	CGGTTGGTGGCTGATGGGAG+AGG	-	chr2_1:3671636-3671655	Msa0188480:CDS	65.0%
	CACCTCCGACTCCGAGGGAT+AGG	-	chr2_1:3672189-3672208	Msa0188480:intron	65.0%
	ACCGGCACAGGAGGCGAACC+AGG	+	chr2_1:3671504-3671523	None:intergenic	70.0%
!!	GAGGGCACCTCCGACTCCGA+GGG	-	chr2_1:3672184-3672203	Msa0188480:intron	70.0%
	GGCCTATCCCTCGGAGTCGG+AGG	+	chr2_1:3672194-3672213	None:intergenic	70.0%
!!	GGAGGGCACCTCCGACTCCG+AGG	-	chr2_1:3672183-3672202	Msa0188480:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_1	gene	3671102	3673985	3671102	ID=Msa0188480;Name=Msa0188480
chr2_1	mRNA	3671102	3673985	3671102	ID=Msa0188480-mRNA-1;Parent=Msa0188480;Name=Msa0188480-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0\|0\|0\|1\|1\|1\|3\|0\|726
chr2_1	exon	3672786	3673985	3672786	ID=Msa0188480-mRNA-1:exon:1563;Parent=Msa0188480-mRNA-1
chr2_1	exon	3671839	3672172	3671839	ID=Msa0188480-mRNA-1:exon:1562;Parent=Msa0188480-mRNA-1
chr2_1	exon	3671102	3671748	3671102	ID=Msa0188480-mRNA-1:exon:1561;Parent=Msa0188480-mRNA-1
chr2_1	CDS	3672786	3673985	3672786	ID=Msa0188480-mRNA-1:cds;Parent=Msa0188480-mRNA-1
chr2_1	CDS	3671839	3672172	3671839	ID=Msa0188480-mRNA-1:cds;Parent=Msa0188480-mRNA-1
chr2_1	CDS	3671102	3671748	3671102	ID=Msa0188480-mRNA-1:cds;Parent=Msa0188480-mRNA-1

Gene Sequence

>Msa0188480

ATGGAAAGGAATGAGAATTCGAAGCCGGGGTCGAATATTCTTACGGTTACGGTTGATGTTCATGGTAATGTTGCGTATGATGCTATTGCGAAGCAGAATGAGAATGCGAAGAAAATTGTATATACTCAGCATAAGGATTTGATACCAATGATTTTCAAGGATGATGAAATGGTGGATGCTCAACTGGATGATGAAATGGCACTTGAGAAGATTGTTAATGTGAGGCTTAGTGCGTCCCAGCCACGAATGTTCAGGGATTCTAAGTGTATAAAGTATAAACCTTCACAACCTAATGCAGCGTTTAATTCTGGTGCGAGGGAGAAGGTTATTAGAATGGTTGAGATGCCTGTTGATCCGTTTGAGCCGCCAAAATTTAAGCAAAAGAGGGTTCCTAAGGCTCCTGGTTCGCCTCCTGTGCCGGTTATGCATTCGCCTCCTAGGCCTGTTACTCTGAAAGATCAGCAGGATTGGAAAATACCTCCTTGTATTTCGAATTGGAAGAATCCGAAGGGTTATACTATTCCTCTCGATAAACGGTTGGTGGCTGATGGGAGAGGCCTCCAAGAGGTTCAGATTAATGATAATTTTGCTAAGCTTTCTGAGGCTTTGTATGTCACGGAGCAGACGGCTAGAGAAGCTGTTGCTATGAGGTCTAAGGTTCAGAAGGAAATTCTTTTGAAGGAGAAGGAAAGGAAAGAGCAGGAGTTGAGGGCTTTGGCTCCTCCGGTTGCTTTGGAAAAGAAGAGAAGGTTATATGCTAAGGATGCTGGCATGGGAAAGAAGTGCAAGATTAATAGAGATAAGGATCGTGATATAAGTGAGAAGGTTGCTCTTGATATGGCTTATACTAAGCAAGGCACAGAGGTCATGTATGATGATAGGCTATTAAACCAGGATAAAGGAATGTCTTCTGGATTTGGCACTGATGATCAGTATAATGTGTATGACAAATGCTTGTTCACCGCACAACTAACACATTCCACACTATACAGGCCGAAGAAGGATGTTGATAATGAAGCTTATGAAGGTGCAGGTGAGCAGCTGGAGAAGACTGACAAAGGATTTACTGGGGCTTCTGAAAGGAGGGCACCTCCGACTCCGAGGGATAGGCCAGTAGAGTTTGAGAGTGAAGAAGCTGATCCATTTGGTCTTGATCAATTCTTGACCGAGGTTAAGAAGGGTAAGAAGGCCATGGAAAATAGGAATAAGGTTTATTCAGCTAATGAAGATCAAGTTTGTATTAATGAATGTGATGGATCCCTAGAGGATATTCATAATAGGGTCACTGCTTCAAATTTGGGCCACTCCAGTGGTCAAAATGAAGACTTTCTTGATGAATCAGGTATTCCTTTTAATGCCACTTTGACACATCAGCAGAAGACTTCTGGAAGCAAACCTCTGTCTGAACATGAACTGGATTTGCATCTTAAAGGTTCAAATGGCTCGCAGAAGACAGTTAGCAGTAATATATCTCAAGATGATGCTGGTAATGATTGTGGTACATCGATATCAGGTGACACAGCTGTGTATCAAGCGACTAGTGTTCCACTATTGGCTCCTGAAAGTTGTATTGGTATGAAGACTAACATTTATCCTCAGCATACATCTGGAGTTGAGCCTTGCCGTAATAAATTAATCGATGAAACTAATGAAACTGTACATGTTGAGCCCATTCCAACAAATGGTGGTAAAGCAGATAAAGTTCAACATATGACTAATGAATCTCAACCCAAACAAAAGGAACCAAATGTTGCATCTTTAAATGGCTTGCAAAAGCCAATTGCTAGTGATAAAGCTTTAGTTGATACTGTCTTTGATTGTGGAGCAGAGTTATCAAGTGATAGTGATGTGTATTACAATGAAAAGATTGATCTTACAGACAAAAGGGATGAATTCCTGAGCTCCCAGCACGCTTTTGGTCAAGATTTACCAGCAATGACTAAGCCAAGAGGACAAAACCTTTGCACTAAGTGCAATGAAGCTGGCCAGTTACTGGTTTGTAAAACTACTACTTGCACATCGATGGTGCATAAAAACTGCCTGGGTGATTCTGCTCAGTTGGACGCAAAGGGAAACTTTCTCTGCCCATTTTGTAAATATTCTCACGCTATTTCAGAATATCTTGAAGCCAAGAAAATATCTTCTTCGGCAAGGAAAGAATTAGCTATCTTCATTACATAA

Protein sequence

>Msa0188480

MERNENSKPGSNILTVTVDVHGNVAYDAIAKQNENAKKIVYTQHKDLIPMIFKDDEMVDAQLDDEMALEKIVNVRLSASQPRMFRDSKCIKYKPSQPNAAFNSGAREKVIRMVEMPVDPFEPPKFKQKRVPKAPGSPPVPVMHSPPRPVTLKDQQDWKIPPCISNWKNPKGYTIPLDKRLVADGRGLQEVQINDNFAKLSEALYVTEQTAREAVAMRSKVQKEILLKEKERKEQELRALAPPVALEKKRRLYAKDAGMGKKCKINRDKDRDISEKVALDMAYTKQGTEVMYDDRLLNQDKGMSSGFGTDDQYNVYDKCLFTAQLTHSTLYRPKKDVDNEAYEGAGEQLEKTDKGFTGASERRAPPTPRDRPVEFESEEADPFGLDQFLTEVKKGKKAMENRNKVYSANEDQVCINECDGSLEDIHNRVTASNLGHSSGQNEDFLDESGIPFNATLTHQQKTSGSKPLSEHELDLHLKGSNGSQKTVSSNISQDDAGNDCGTSISGDTAVYQATSVPLLAPESCIGMKTNIYPQHTSGVEPCRNKLIDETNETVHVEPIPTNGGKADKVQHMTNESQPKQKEPNVASLNGLQKPIASDKALVDTVFDCGAELSSDSDVYYNEKIDLTDKRDEFLSSQHAFGQDLPAMTKPRGQNLCTKCNEAGQLLVCKTTTCTSMVHKNCLGDSAQLDAKGNFLCPFCKYSHAISEYLEAKKISSSARKELAIFIT*