AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0703780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0703780 MtrunA17_Chr8g0382261 92.994 157 10 1 1 157 95 250 1.80e-103 300
Msa0703780 MtrunA17_Chr3g0124001 55.484 155 60 3 8 157 116 266 3.15e-47 157
Msa0703780 MtrunA17_Chr1g0186161 52.273 88 42 0 70 157 137 224 1.14e-24 96.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0703780 AT4G39870.2 51.266 158 69 4 6 157 132 287 2.20e-43 147
Msa0703780 AT4G39870.1 51.266 158 69 4 6 157 132 287 2.20e-43 147
Msa0703780 AT2G05590.1 52.747 91 43 0 67 157 122 212 8.56e-28 104
Msa0703780 AT2G05590.2 52.747 91 43 0 67 157 122 212 1.97e-27 104

Find 107 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCCTTCACTTGAAATTC+TGG 0.230950 4_4:+75806699 None:intergenic
GGTTTGTTATGGTCAGAAAT+AGG 0.233665 4_4:+75809812 None:intergenic
ATATTGATTCCTCCTAAAAT+AGG 0.269529 4_4:-75809920 Msa0703780:five_prime_UTR
GGTAGATGATGATGAGTTAA+AGG 0.279770 4_4:-75809655 Msa0703780:five_prime_UTR
TAGATTATGAATTATGATAA+AGG 0.297309 4_4:-75810011 Msa0703780:five_prime_UTR
AGTTCGGTTTCCGAAACTTA+TGG 0.320071 4_4:-75806744 Msa0703780:three_prime_UTR
TATCACTTTCAACTCTTTAC+CGG 0.326685 4_4:-75809048 Msa0703780:CDS
GCACTTCCGGCTTTAATTCA+TGG 0.329830 4_4:-75809219 Msa0703780:CDS
ACATGCTTGTAAATATTTGC+AGG 0.331389 4_4:-75806265 Msa0703780:three_prime_UTR
CAACCAATTTCTCATTCATT+TGG 0.340463 4_4:+75809493 None:intergenic
TCAAGAAGGGATTGTTATCT+AGG 0.341466 4_4:-75809470 Msa0703780:CDS
TTCTCTTGTTGGATGGTTGA+AGG 0.342424 4_4:+75808129 None:intergenic
GTTTGTTATGGTCAGAAATA+GGG 0.345242 4_4:+75809813 None:intergenic
TGCGGTTTATGATGCACTTC+CGG 0.349970 4_4:-75809232 Msa0703780:CDS
TTGGCCTGGACCTAGTTTGC+TGG 0.351025 4_4:-75809014 Msa0703780:intron
TGATCATTTGCCGGAAATAT+CGG 0.357645 4_4:-75809289 Msa0703780:CDS
CAAAGCAGTTCACCTTGTTT+CGG 0.358183 4_4:-75809858 Msa0703780:five_prime_UTR
ACAAGGATTGCCATAAGTTT+CGG 0.368495 4_4:+75806734 None:intergenic
TGACCAAATGAATGAGAAAT+TGG 0.373689 4_4:-75809496 Msa0703780:exon
ATTGAAGGTTCCGATATTTC+CGG 0.382091 4_4:+75809279 None:intergenic
CATATCAACTCAAGATTGAA+TGG 0.382180 4_4:-75806771 Msa0703780:intron
AGATTATGAATTATGATAAA+GGG 0.382482 4_4:-75810010 Msa0703780:five_prime_UTR
CTTTAATTCATGGGAAGAAC+TGG 0.407743 4_4:-75809209 Msa0703780:CDS
AGGAGCAGTGTTTGGTGGCT+TGG 0.413328 4_4:-75808162 Msa0703780:CDS
TAATGACGGTGAGGGAATAT+AGG 0.417137 4_4:-75809983 Msa0703780:five_prime_UTR
TTTGGTTGTTGATCATTTGC+CGG 0.432855 4_4:-75809298 Msa0703780:CDS
TGTTGATTTCAAATAGTTTG+AGG 0.435731 4_4:-75809257 Msa0703780:CDS
GACCGAAAAGGAGCAGTGTT+TGG 0.438263 4_4:-75808170 Msa0703780:CDS
CTATTTGAAATCAACATTGA+AGG 0.441509 4_4:+75809264 None:intergenic
CTTTGCAGCACATGGAAACA+TGG 0.442796 4_4:-75809073 Msa0703780:intron
GCAGTAAACGACGACGTATC+AGG 0.445057 4_4:+75809609 None:intergenic
AAGATTGAATGGGTCAAGTT+CGG 0.451165 4_4:-75806760 Msa0703780:exon
TGAGAAATTGGTTGTCAAGA+AGG 0.453693 4_4:-75809484 Msa0703780:CDS
TTTACCGGAGAAGTATGCTT+TGG 0.460274 4_4:-75809033 Msa0703780:CDS
CAGGTTGTTGGAGACCGAAA+AGG 0.462680 4_4:-75808182 Msa0703780:CDS
TCGTGTCGTGTCTCAACAAC+CGG 0.465220 4_4:-75810103 Msa0703780:five_prime_UTR
CTGAGTCATCATCGGTCACT+CGG 0.465381 4_4:+75810167 None:intergenic
AATTATTGTTTAGGAAGAAA+AGG 0.466326 4_4:-75809676 Msa0703780:intron
TGAAATTGTACCAGCAAACT+AGG 0.469728 4_4:+75809004 None:intergenic
CGGAGAAGTATGCTTTGGCC+TGG 0.471135 4_4:-75809028 Msa0703780:CDS
GATAAGATTGTGACTGCAGC+TGG 0.474335 4_4:-75809528 Msa0703780:five_prime_UTR
AGTTCATACCCATTACAAAA+TGG 0.475573 4_4:-75806224 Msa0703780:three_prime_UTR
CACTTCCGGCTTTAATTCAT+GGG 0.478819 4_4:-75809218 Msa0703780:CDS
AGAGGTACCTAGTGTGCCTT+TGG 0.478962 4_4:-75809316 Msa0703780:CDS
CAAGAAGGGATTGTTATCTA+GGG 0.481467 4_4:-75809469 Msa0703780:CDS
TCCCTTTCGCCATCTTGTGT+TGG 0.483560 4_4:+75809396 None:intergenic
TCTCTTGTTGGATGGTTGAA+GGG 0.490005 4_4:+75808130 None:intergenic
GAGAAATTGGTTGTCAAGAA+GGG 0.491672 4_4:-75809483 Msa0703780:CDS
ATTTATCTATCTGCTAGAAC+GGG 0.507739 4_4:-75809426 Msa0703780:CDS
GAGGACGAGAGGGTTTGTTA+TGG 0.508533 4_4:+75809801 None:intergenic
TTCTCCAGAATTTCAAGTGA+AGG 0.510211 4_4:-75806703 Msa0703780:three_prime_UTR
GGGATAGATTTGAGTCTGAT+GGG 0.512274 4_4:-75809377 Msa0703780:CDS
TATTTATCTATCTGCTAGAA+CGG 0.513283 4_4:-75809427 Msa0703780:CDS
TTGAGCAAAACAGAGGCACC+TGG 0.517709 4_4:-75806469 Msa0703780:three_prime_UTR
AGGGATAGATTTGAGTCTGA+TGG 0.518517 4_4:-75809378 Msa0703780:CDS
CTTTCCTCCATGCAGTTGTG+GGG 0.519234 4_4:-75806529 Msa0703780:intron
AGAACTGGTTAATGATGTAC+AGG 0.519562 4_4:-75809194 Msa0703780:intron
AGGCACCTGGGATCTCTCGC+TGG 0.521785 4_4:-75806456 Msa0703780:three_prime_UTR
GGTGTTGATGATTATGCTGC+CGG 0.521825 4_4:+75810066 None:intergenic
AATTGCAATTTCTGCTAGCA+AGG 0.522215 4_4:-75806353 Msa0703780:three_prime_UTR
CTCTTGTTGGATGGTTGAAG+GGG 0.527238 4_4:+75808131 None:intergenic
TTCTTCCCATGAATTAAAGC+CGG 0.530383 4_4:+75809213 None:intergenic
ATTGTGACTGCAGCTGGAGC+TGG 0.535852 4_4:-75809522 Msa0703780:five_prime_UTR
TGATAAAGGGATTGTAATGA+CGG 0.536835 4_4:-75809997 Msa0703780:five_prime_UTR
CGAAAAGGAGCAGTGTTTGG+TGG 0.540629 4_4:-75808167 Msa0703780:CDS
ACCGGAAAACGCTTCTACAC+CGG 0.545063 4_4:-75810085 Msa0703780:five_prime_UTR
ATATTTACAAGCATGTTACA+TGG 0.546363 4_4:+75806272 Msa0703770:intron
AATTGAGAACTTACTATGGA+AGG 0.547869 4_4:+75809779 None:intergenic
ATATCAACTCAAGATTGAAT+GGG 0.549497 4_4:-75806770 Msa0703780:intron
AGATTTGAGTCTGATGGGTG+TGG 0.549958 4_4:-75809372 Msa0703780:CDS
TGTATTTCCTTCAAAACATG+AGG 0.552112 4_4:-75806503 Msa0703780:three_prime_UTR
TTCAAATAGTTTGAGGAATG+CGG 0.552777 4_4:-75809250 Msa0703780:CDS
CAGGCCAAAGCATACTTCTC+CGG 0.555164 4_4:+75809029 None:intergenic
GAAAGTGAATCAGAGATTGA+AGG 0.560111 4_4:-75809633 Msa0703780:five_prime_UTR
TGAGTCTGATGGGTGTGGTG+TGG 0.567048 4_4:-75809367 Msa0703780:CDS
TTCCAACACAAGATGGCGAA+AGG 0.567792 4_4:-75809398 Msa0703780:CDS
CATGTTACATGGTGATAACA+TGG 0.568306 4_4:+75806283 Msa0703770:intron
TGTACCAGCAAACTAGGTCC+AGG 0.570453 4_4:+75809010 None:intergenic
TCAACAACCAAAGGCACACT+AGG 0.571234 4_4:+75809309 None:intergenic
CATGCTTGTAAATATTTGCA+GGG 0.571962 4_4:-75806264 Msa0703780:three_prime_UTR
TCCAACACAAGATGGCGAAA+GGG 0.576200 4_4:-75809397 Msa0703780:CDS
GGTGGATTTCCAACACAAGA+TGG 0.577445 4_4:-75809405 Msa0703780:CDS
TTTGCAGCACATGGAAACAT+GGG 0.579278 4_4:-75809072 Msa0703780:intron
ATTTCAAGTGAAGGAAGTAG+AGG 0.579766 4_4:-75806694 Msa0703780:intron
TATCTATCTGCTAGAACGGG+TGG 0.584754 4_4:-75809423 Msa0703780:CDS
AGGGATTGTAATGACGGTGA+GGG 0.585410 4_4:-75809991 Msa0703780:five_prime_UTR
AAGGGATTGTAATGACGGTG+AGG 0.597285 4_4:-75809992 Msa0703780:five_prime_UTR
CAGTGGTGAGATCCGAAACA+AGG 0.598925 4_4:+75809846 None:intergenic
ATTTACCAGCGAGAGATCCC+AGG 0.600370 4_4:+75806451 Msa0703770:intron
ATTGCAATTTCTGCTAGCAA+GGG 0.601315 4_4:-75806352 Msa0703780:three_prime_UTR
GGCAAATGATCAACAACCAA+AGG 0.615389 4_4:+75809300 None:intergenic
TGAGCAAAACAGAGGCACCT+GGG 0.621947 4_4:-75806468 Msa0703780:three_prime_UTR
TCAGTAAAATGCGAACTGCA+AGG 0.623392 4_4:+75806398 Msa0703770:intron
TCTGGAGAATGTGCTAAACA+AGG 0.634055 4_4:+75806717 None:intergenic
ACTATGGAAGGAGGACGAGA+GGG 0.634975 4_4:+75809791 None:intergenic
TACTATGGAAGGAGGACGAG+AGG 0.638442 4_4:+75809790 None:intergenic
ACTAAAATTGAGCAAAACAG+AGG 0.638548 4_4:-75806476 Msa0703780:three_prime_UTR
AAGAAGGGATTGTTATCTAG+GGG 0.664052 4_4:-75809468 Msa0703780:CDS
TGAGAACTTACTATGGAAGG+AGG 0.668946 4_4:+75809782 None:intergenic
CTAGGTACCTCTTTCAACGG+CGG 0.669452 4_4:+75809327 None:intergenic
AATAGGGTTGAGAAGAACAG+TGG 0.691115 4_4:+75809829 None:intergenic
ACACTAGGTACCTCTTTCAA+CGG 0.691173 4_4:+75809324 None:intergenic
TTACATGGTGATAACATGGG+TGG 0.696576 4_4:+75806287 Msa0703770:intron
AGTCATCATCGGTCACTCGG+CGG 0.705390 4_4:+75810170 None:intergenic
CCAACAAGAGAAAATACCAG+TGG 0.721489 4_4:-75808118 Msa0703780:intron
ATGTTACATGGTGATAACAT+GGG 0.733161 4_4:+75806284 Msa0703770:intron
ATTATCTCTAGAATCCGACG+AGG 0.791211 4_4:+75809563 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAAAAAATAATTAAA+CGG - chr4_4:75806407-75806426 Msa0703780:three_prime_UTR 0.0%
!! TGTATATTAAATTATTGTTT+AGG - chr4_4:75806675-75806694 Msa0703780:intron 10.0%
!!! TTTTAATTTTAAATGAAGTA+TGG - chr4_4:75809088-75809107 Msa0703780:intron 10.0%
!!! ATTTTGTTTAGAATAAAAAT+TGG - chr4_4:75810162-75810181 Msa0703780:five_prime_UTR 10.0%
!! TAGATTATGAATTATGATAA+AGG - chr4_4:75806349-75806368 Msa0703780:three_prime_UTR 15.0%
!! AGATTATGAATTATGATAAA+GGG - chr4_4:75806350-75806369 Msa0703780:three_prime_UTR 15.0%
!! ATTAAAAAATAATTAAACGG+TGG - chr4_4:75806410-75806429 Msa0703780:three_prime_UTR 15.0%
!! ACTGTAATTTATTGAATATA+TGG - chr4_4:75807650-75807669 Msa0703780:intron 15.0%
!! ATAAAAAAAAATAAAACCAC+TGG + chr4_4:75808261-75808280 None:intergenic 15.0%
!! TGTATTACTAAATCAATAAT+AGG - chr4_4:75808551-75808570 Msa0703780:intron 15.0%
!! ATTATAGAAAGAAAAAATCT+GGG - chr4_4:75809305-75809324 Msa0703780:CDS 15.0%
!! GATGATATTATAATTATAGA+GGG + chr4_4:75809538-75809557 None:intergenic 15.0%
!! TGATGATATTATAATTATAG+AGG + chr4_4:75809539-75809558 None:intergenic 15.0%
!! AATTGCAACAAAAAAAAATT+AGG + chr4_4:75809563-75809582 None:intergenic 15.0%
!!! TTTTTTTTTGTTGCAATTTT+TGG - chr4_4:75809565-75809584 Msa0703780:five_prime_UTR 15.0%
!!! GTAATAATAAAAAGAGGTTT+TGG + chr4_4:75806318-75806337 Msa0703770:intron 20.0%
!! GTTGTTGTAATAATAAAAAG+AGG + chr4_4:75806324-75806343 Msa0703770:intron 20.0%
!!! CTTTTTTCTATTCCTATTTT+AGG + chr4_4:75806455-75806474 Msa0703770:intron 20.0%
!! ATAGGAATAGAAAAAAGAAA+TGG - chr4_4:75806458-75806477 Msa0703780:three_prime_UTR 20.0%
!! TAGGAATAGAAAAAAGAAAT+GGG - chr4_4:75806459-75806478 Msa0703780:three_prime_UTR 20.0%
!! AATTATTGTTTAGGAAGAAA+AGG - chr4_4:75806684-75806703 Msa0703780:intron 20.0%
!!! TTTTGTATTAAGGTTTTTGA+AGG - chr4_4:75807192-75807211 Msa0703780:intron 20.0%
!! AAATAGCTAACAATACATTA+AGG + chr4_4:75808153-75808172 None:intergenic 20.0%
!! AAAATTAACATTGTTGCAAA+GGG + chr4_4:75808307-75808326 None:intergenic 20.0%
!! TAAAATTAACATTGTTGCAA+AGG + chr4_4:75808308-75808327 None:intergenic 20.0%
!! AAAAGAGATATAATACTGTT+GGG + chr4_4:75808424-75808443 None:intergenic 20.0%
!! AAAAAGAGATATAATACTGT+TGG + chr4_4:75808425-75808444 None:intergenic 20.0%
!!! AATTATCAGTTTTAATGACA+TGG - chr4_4:75808680-75808699 Msa0703780:intron 20.0%
!!! TTTTTCTTTCTATAATCATG+TGG + chr4_4:75809301-75809320 None:intergenic 20.0%
!! GATTATAGAAAGAAAAAATC+TGG - chr4_4:75809304-75809323 Msa0703780:CDS 20.0%
!!! ATGATTTGTTTGATGAAAAA+AGG + chr4_4:75809508-75809527 None:intergenic 20.0%
!! ATATTATAATTATAGAGGGA+AGG + chr4_4:75809534-75809553 None:intergenic 20.0%
!!! AAAATAGACCATTTTGTAAT+GGG + chr4_4:75810147-75810166 None:intergenic 20.0%
!!! ATATTGATTCCTCCTAAAAT+AGG - chr4_4:75806440-75806459 Msa0703780:three_prime_UTR 25.0%
!!! TTTTCTATTCCTATTTTAGG+AGG + chr4_4:75806452-75806471 Msa0703770:intron 25.0%
! TGCAATTAAAGCTATAATCT+AGG + chr4_4:75806609-75806628 None:intergenic 25.0%
! TATTTATCTATCTGCTAGAA+CGG - chr4_4:75806933-75806952 Msa0703780:intron 25.0%
!! CTATTTGAAATCAACATTGA+AGG + chr4_4:75807099-75807118 None:intergenic 25.0%
!!! TGTTGATTTCAAATAGTTTG+AGG - chr4_4:75807103-75807122 Msa0703780:intron 25.0%
! AAAGTAAGAAAGAACAAACA+TGG + chr4_4:75807424-75807443 None:intergenic 25.0%
!! TAGACAATTTGATAATCTCT+AGG - chr4_4:75807446-75807465 Msa0703780:intron 25.0%
!! AGACAATTTGATAATCTCTA+GGG - chr4_4:75807447-75807466 Msa0703780:intron 25.0%
! AATGGAACAAAAATATGTGT+AGG + chr4_4:75807704-75807723 None:intergenic 25.0%
! ATCTATAGCTCAATTCTAAA+TGG + chr4_4:75807722-75807741 None:intergenic 25.0%
! CTATTAGACCATTCAATAAT+AGG - chr4_4:75807782-75807801 Msa0703780:intron 25.0%
! TTGTAATTAATAGTAGCACA+CGG - chr4_4:75807973-75807992 Msa0703780:intron 25.0%
! TTCTCTTTGCAGATTAAAAT+TGG + chr4_4:75808068-75808087 None:intergenic 25.0%
!!! ATTGTTAGCTATTTTTTTCC+AGG - chr4_4:75808159-75808178 Msa0703780:CDS 25.0%
!! TGTTGACATAAATTTTGTAC+AGG - chr4_4:75808343-75808362 Msa0703780:intron 25.0%
!! GTTGACATAAATTTTGTACA+GGG - chr4_4:75808344-75808363 Msa0703780:intron 25.0%
!!! CTTTTGTTGTCTTAGTTATA+CGG - chr4_4:75808479-75808498 Msa0703780:intron 25.0%
!! TTTCCTTTTACAAAACTATG+TGG - chr4_4:75808616-75808635 Msa0703780:intron 25.0%
!! TTTTCAAACCCAAAAAATGA+GGG + chr4_4:75808826-75808845 None:intergenic 25.0%
!!! TTTTTCAAACCCAAAAAATG+AGG + chr4_4:75808827-75808846 None:intergenic 25.0%
! CAAATTTGCAATATATCCTT+TGG + chr4_4:75808901-75808920 None:intergenic 25.0%
!! CTAGATATAATTTTACCTCA+AGG - chr4_4:75808994-75809013 Msa0703780:intron 25.0%
! ATCTTAATGTACTGTTAGAA+AGG - chr4_4:75809024-75809043 Msa0703780:CDS 25.0%
! TCTTTAATGGTTTCAATCAA+TGG - chr4_4:75809062-75809081 Msa0703780:CDS 25.0%
!! ATATTGCATCATCTTTTTGT+GGG + chr4_4:75809154-75809173 None:intergenic 25.0%
!! AATATTGCATCATCTTTTTG+TGG + chr4_4:75809155-75809174 None:intergenic 25.0%
! ATATCAACTCAAGATTGAAT+GGG - chr4_4:75809590-75809609 Msa0703780:five_prime_UTR 25.0%
! AAATGTTTCGTACATCAATA+AGG + chr4_4:75809784-75809803 None:intergenic 25.0%
! ATATTTACAAGCATGTTACA+TGG + chr4_4:75810091-75810110 None:intergenic 25.0%
!! CAAAATAGACCATTTTGTAA+TGG + chr4_4:75810148-75810167 None:intergenic 25.0%
TGATAAAGGGATTGTAATGA+CGG - chr4_4:75806363-75806382 Msa0703780:three_prime_UTR 30.0%
ATGGGAAAAAGCAATCTTTA+CGG - chr4_4:75806477-75806496 Msa0703780:three_prime_UTR 30.0%
!! GTTTGTTATGGTCAGAAATA+GGG + chr4_4:75806550-75806569 None:intergenic 30.0%
AATTGAGAACTTACTATGGA+AGG + chr4_4:75806584-75806603 None:intergenic 30.0%
GGTTAATTGAGAACTTACTA+TGG + chr4_4:75806588-75806607 None:intergenic 30.0%
TGACCAAATGAATGAGAAAT+TGG - chr4_4:75806864-75806883 Msa0703780:intron 30.0%
CAACCAATTTCTCATTCATT+TGG + chr4_4:75806870-75806889 None:intergenic 30.0%
ATTTATCTATCTGCTAGAAC+GGG - chr4_4:75806934-75806953 Msa0703780:intron 30.0%
TTCAAATAGTTTGAGGAATG+CGG - chr4_4:75807110-75807129 Msa0703780:intron 30.0%
!!! GTACAGGTAGTTTTGTATTA+AGG - chr4_4:75807182-75807201 Msa0703780:intron 30.0%
TATCACTTTCAACTCTTTAC+CGG - chr4_4:75807312-75807331 Msa0703780:intron 30.0%
TTATTTAAATACCCGACATG+AGG - chr4_4:75807541-75807560 Msa0703780:intron 30.0%
! AGAAGCTAAGAAACAACTTT+TGG - chr4_4:75807609-75807628 Msa0703780:intron 30.0%
! GAAGCTAAGAAACAACTTTT+GGG - chr4_4:75807610-75807629 Msa0703780:intron 30.0%
!!! TAAGAAACAACTTTTGGGTT+TGG - chr4_4:75807615-75807634 Msa0703780:intron 30.0%
CCTTGCATAACAATAATATG+TGG + chr4_4:75807755-75807774 None:intergenic 30.0%
CCACATATTATTGTTATGCA+AGG - chr4_4:75807752-75807771 Msa0703780:intron 30.0%
TAAATCACTGTAAACCAACA+TGG + chr4_4:75807808-75807827 None:intergenic 30.0%
CAATGTGATGAACATGAAAT+GGG + chr4_4:75807844-75807863 None:intergenic 30.0%
TCAATGTGATGAACATGAAA+TGG + chr4_4:75807845-75807864 None:intergenic 30.0%
!! TTTGTTTTCACAAACATCTC+TGG - chr4_4:75808380-75808399 Msa0703780:intron 30.0%
!!! CATCCACATAGTTTTGTAAA+AGG + chr4_4:75808622-75808641 None:intergenic 30.0%
TTTACAAAACTATGTGGATG+AGG - chr4_4:75808622-75808641 Msa0703780:intron 30.0%
! AACATGATGCTTTTGTAACT+TGG - chr4_4:75808768-75808787 Msa0703780:intron 30.0%
! TTTGGGTTTGAAAAATCAGA+AGG - chr4_4:75808832-75808851 Msa0703780:intron 30.0%
ATATTGCAAATTTGCCATTG+AGG - chr4_4:75808907-75808926 Msa0703780:intron 30.0%
!! ATTAAGATGAATTAGCCTTG+AGG + chr4_4:75809012-75809031 None:intergenic 30.0%
TAGAAAGAAAAAATCTGGGT+TGG - chr4_4:75809309-75809328 Msa0703780:CDS 30.0%
TGAATTAACCACAATATTGC+AGG - chr4_4:75809375-75809394 Msa0703780:CDS 30.0%
CATATCAACTCAAGATTGAA+TGG - chr4_4:75809589-75809608 Msa0703780:five_prime_UTR 30.0%
TGTATTTCCTTCAAAACATG+AGG - chr4_4:75809857-75809876 Msa0703780:five_prime_UTR 30.0%
ACTAAAATTGAGCAAAACAG+AGG - chr4_4:75809884-75809903 Msa0703780:five_prime_UTR 30.0%
ATGTTACATGGTGATAACAT+GGG + chr4_4:75810079-75810098 None:intergenic 30.0%
ACATGCTTGTAAATATTTGC+AGG - chr4_4:75810095-75810114 Msa0703780:five_prime_UTR 30.0%
CATGCTTGTAAATATTTGCA+GGG - chr4_4:75810096-75810115 Msa0703780:five_prime_UTR 30.0%
AGTTCATACCCATTACAAAA+TGG - chr4_4:75810136-75810155 Msa0703780:five_prime_UTR 30.0%
!! GGTTTGTTATGGTCAGAAAT+AGG + chr4_4:75806551-75806570 None:intergenic 35.0%
! GGTAGATGATGATGAGTTAA+AGG - chr4_4:75806705-75806724 Msa0703780:three_prime_UTR 35.0%
GAAAGTGAATCAGAGATTGA+AGG - chr4_4:75806727-75806746 Msa0703780:three_prime_UTR 35.0%
TGAGAAATTGGTTGTCAAGA+AGG - chr4_4:75806876-75806895 Msa0703780:intron 35.0%
GAGAAATTGGTTGTCAAGAA+GGG - chr4_4:75806877-75806896 Msa0703780:intron 35.0%
TCAAGAAGGGATTGTTATCT+AGG - chr4_4:75806890-75806909 Msa0703780:intron 35.0%
CAAGAAGGGATTGTTATCTA+GGG - chr4_4:75806891-75806910 Msa0703780:intron 35.0%
AAGAAGGGATTGTTATCTAG+GGG - chr4_4:75806892-75806911 Msa0703780:intron 35.0%
TTTGGTTGTTGATCATTTGC+CGG - chr4_4:75807062-75807081 Msa0703780:intron 35.0%
TGATCATTTGCCGGAAATAT+CGG - chr4_4:75807071-75807090 Msa0703780:intron 35.0%
ATTGAAGGTTCCGATATTTC+CGG + chr4_4:75807084-75807103 None:intergenic 35.0%
TTCTTCCCATGAATTAAAGC+CGG + chr4_4:75807150-75807169 None:intergenic 35.0%
CTTTAATTCATGGGAAGAAC+TGG - chr4_4:75807151-75807170 Msa0703780:intron 35.0%
AGAACTGGTTAATGATGTAC+AGG - chr4_4:75807166-75807185 Msa0703780:intron 35.0%
TGAAATTGTACCAGCAAACT+AGG + chr4_4:75807359-75807378 None:intergenic 35.0%
ATAAGCTTAATTGTGCTGGA+GGG + chr4_4:75807385-75807404 None:intergenic 35.0%
CAACATAAGCTTAATTGTGC+TGG + chr4_4:75807389-75807408 None:intergenic 35.0%
GATTGATAAATTGAGCTGCA+CGG - chr4_4:75807478-75807497 Msa0703780:intron 35.0%
ATGAAATATGCACCTCATGT+CGG + chr4_4:75807556-75807575 None:intergenic 35.0%
ACTGACATATGATTTCTGTC+TGG - chr4_4:75807675-75807694 Msa0703780:intron 35.0%
CTGACATATGATTTCTGTCT+GGG - chr4_4:75807676-75807695 Msa0703780:intron 35.0%
CAACATGGCCTATTATTGAA+TGG + chr4_4:75807793-75807812 None:intergenic 35.0%
CATTCAATAATAGGCCATGT+TGG - chr4_4:75807791-75807810 Msa0703780:intron 35.0%
! ATCACATTGATGACTTCGTA+TGG - chr4_4:75807855-75807874 Msa0703780:intron 35.0%
!! AGAGGGGTATTTCAAAAGTT+GGG + chr4_4:75807906-75807925 None:intergenic 35.0%
!! AAGAGGGGTATTTCAAAAGT+TGG + chr4_4:75807907-75807926 None:intergenic 35.0%
ACAATATGCCATCAACAAGA+GGG + chr4_4:75807923-75807942 None:intergenic 35.0%
TACAATATGCCATCAACAAG+AGG + chr4_4:75807924-75807943 None:intergenic 35.0%
ACCAATAAGCTTGCAAACAT+GGG + chr4_4:75808025-75808044 None:intergenic 35.0%
AACCAATAAGCTTGCAAACA+TGG + chr4_4:75808026-75808045 None:intergenic 35.0%
! AACTCAGTCTTGCTGATTAA+AGG + chr4_4:75808105-75808124 None:intergenic 35.0%
!!! GCTATTTTTTTCCAGGTTGT+TGG - chr4_4:75808166-75808185 Msa0703780:CDS 35.0%
! TGGTATTTTCTCTTGTTGGA+TGG + chr4_4:75808241-75808260 None:intergenic 35.0%
TTTAATGACATGGTATCCCA+CGG - chr4_4:75808690-75808709 Msa0703780:intron 35.0%
! TGCTTTTGTAACTTGGAATC+TGG - chr4_4:75808775-75808794 Msa0703780:intron 35.0%
CATGACAATCCAGAAATGTA+GGG + chr4_4:75808860-75808879 None:intergenic 35.0%
TCATGACAATCCAGAAATGT+AGG + chr4_4:75808861-75808880 None:intergenic 35.0%
ATATATCCTTTGGCAAGATG+TGG + chr4_4:75808891-75808910 None:intergenic 35.0%
!! GTCTCTAAAGTCAACAGAAA+GGG + chr4_4:75808945-75808964 None:intergenic 35.0%
!! TGTCTCTAAAGTCAACAGAA+AGG + chr4_4:75808946-75808965 None:intergenic 35.0%
TTGAAACCATTAAAGATGCC+AGG + chr4_4:75809058-75809077 None:intergenic 35.0%
! TTTTTGTGGGCAACTTCAAT+AGG + chr4_4:75809141-75809160 None:intergenic 35.0%
!! AGAAAAAATCTGGGTTGGTT+TGG - chr4_4:75809314-75809333 Msa0703780:CDS 35.0%
!! AGGTCATTTTGCGCTTTATT+TGG - chr4_4:75809452-75809471 Msa0703780:CDS 35.0%
!!! TCATTTTGCGCTTTATTTGG+AGG - chr4_4:75809455-75809474 Msa0703780:CDS 35.0%
!!! CATTTTGCGCTTTATTTGGA+GGG - chr4_4:75809456-75809475 Msa0703780:CDS 35.0%
AAGATTGAATGGGTCAAGTT+CGG - chr4_4:75809600-75809619 Msa0703780:five_prime_UTR 35.0%
ACAAGGATTGCCATAAGTTT+CGG + chr4_4:75809629-75809648 None:intergenic 35.0%
! TTCTCCAGAATTTCAAGTGA+AGG - chr4_4:75809657-75809676 Msa0703780:five_prime_UTR 35.0%
ACTTCCTTCACTTGAAATTC+TGG + chr4_4:75809664-75809683 None:intergenic 35.0%
! ATTTCAAGTGAAGGAAGTAG+AGG - chr4_4:75809666-75809685 Msa0703780:five_prime_UTR 35.0%
ATTGATAAAAAGGGGGGAAA+AGG + chr4_4:75809737-75809756 None:intergenic 35.0%
GAACAGATTGATAAAAAGGG+GGG + chr4_4:75809743-75809762 None:intergenic 35.0%
GGAACAGATTGATAAAAAGG+GGG + chr4_4:75809744-75809763 None:intergenic 35.0%
CGGAACAGATTGATAAAAAG+GGG + chr4_4:75809745-75809764 None:intergenic 35.0%
CCGGAACAGATTGATAAAAA+GGG + chr4_4:75809746-75809765 None:intergenic 35.0%
! CCCTTTTTATCAATCTGTTC+CGG - chr4_4:75809743-75809762 Msa0703780:intron 35.0%
TGTTTCGTACATCAATAAGG+AGG + chr4_4:75809781-75809800 None:intergenic 35.0%
!! AGTATCTCCTCATGTTTTGA+AGG + chr4_4:75809867-75809886 None:intergenic 35.0%
AATTGCAATTTCTGCTAGCA+AGG - chr4_4:75810007-75810026 Msa0703780:five_prime_UTR 35.0%
ATTGCAATTTCTGCTAGCAA+GGG - chr4_4:75810008-75810027 Msa0703780:five_prime_UTR 35.0%
CATGTTACATGGTGATAACA+TGG + chr4_4:75810080-75810099 None:intergenic 35.0%
!! TCGCTTTTCTGAGTCATCAT+CGG + chr4_4:75806204-75806223 Msa0703770:intron 40.0%
TAATGACGGTGAGGGAATAT+AGG - chr4_4:75806377-75806396 Msa0703780:three_prime_UTR 40.0%
! CAAAGCAGTTCACCTTGTTT+CGG - chr4_4:75806502-75806521 Msa0703780:three_prime_UTR 40.0%
AATAGGGTTGAGAAGAACAG+TGG + chr4_4:75806534-75806553 Msa0703770:CDS 40.0%
TGAGAACTTACTATGGAAGG+AGG + chr4_4:75806581-75806600 None:intergenic 40.0%
!! TTCATTTTTGTCGTCCTCGT+CGG - chr4_4:75806783-75806802 Msa0703780:intron 40.0%
!! ATTATCTCTAGAATCCGACG+AGG + chr4_4:75806800-75806819 None:intergenic 40.0%
AGGGATAGATTTGAGTCTGA+TGG - chr4_4:75806982-75807001 Msa0703780:intron 40.0%
GGGATAGATTTGAGTCTGAT+GGG - chr4_4:75806983-75807002 Msa0703780:intron 40.0%
ACACTAGGTACCTCTTTCAA+CGG + chr4_4:75807039-75807058 None:intergenic 40.0%
GGCAAATGATCAACAACCAA+AGG + chr4_4:75807063-75807082 None:intergenic 40.0%
! CACTTCCGGCTTTAATTCAT+GGG - chr4_4:75807142-75807161 Msa0703780:intron 40.0%
ATGTGTTTCTTTGCAGCACA+TGG - chr4_4:75807279-75807298 Msa0703780:intron 40.0%
TTTGCAGCACATGGAAACAT+GGG - chr4_4:75807288-75807307 Msa0703780:intron 40.0%
! TTTACCGGAGAAGTATGCTT+TGG - chr4_4:75807327-75807346 Msa0703780:intron 40.0%
CATAAGCTTAATTGTGCTGG+AGG + chr4_4:75807386-75807405 None:intergenic 40.0%
TGAAATATGCACCTCATGTC+GGG + chr4_4:75807555-75807574 None:intergenic 40.0%
!!! GAAACAACTTTTGGGTTTGG+TGG - chr4_4:75807618-75807637 Msa0703780:intron 40.0%
GATGACTTCGTATGGATGAA+TGG - chr4_4:75807863-75807882 Msa0703780:intron 40.0%
TGAAATACCCCTCTTGTTGA+TGG - chr4_4:75807912-75807931 Msa0703780:intron 40.0%
CAATATGCCATCAACAAGAG+GGG + chr4_4:75807922-75807941 None:intergenic 40.0%
TAGTAGCACACGGAGTTTAA+CGG - chr4_4:75807983-75808002 Msa0703780:intron 40.0%
TCCCATGTTTGCAAGCTTAT+TGG - chr4_4:75808021-75808040 Msa0703780:intron 40.0%
GGTTAATAAGCTCATGCTGT+TGG - chr4_4:75808042-75808061 Msa0703780:intron 40.0%
GTTCTACACTCTACATTCAG+TGG - chr4_4:75808122-75808141 Msa0703780:CDS 40.0%
TACACTCTACATTCAGTGGT+TGG - chr4_4:75808126-75808145 Msa0703780:CDS 40.0%
TCTCTTGTTGGATGGTTGAA+GGG + chr4_4:75808233-75808252 None:intergenic 40.0%
TTCTCTTGTTGGATGGTTGA+AGG + chr4_4:75808234-75808253 None:intergenic 40.0%
! CCACTGGTATTTTCTCTTGT+TGG + chr4_4:75808245-75808264 None:intergenic 40.0%
CCAACAAGAGAAAATACCAG+TGG - chr4_4:75808242-75808261 Msa0703780:intron 40.0%
TTAATGACATGGTATCCCAC+GGG - chr4_4:75808691-75808710 Msa0703780:intron 40.0%
ATTGTACCACATCTTGCCAA+AGG - chr4_4:75808882-75808901 Msa0703780:intron 40.0%
GGAAATCAAGCTTTCCTCAA+TGG + chr4_4:75808924-75808943 None:intergenic 40.0%
GTTAGAAAGGATGAGTTTCC+TGG - chr4_4:75809037-75809056 Msa0703780:CDS 40.0%
GAGTTTCCTGGCATCTTTAA+TGG - chr4_4:75809049-75809068 Msa0703780:CDS 40.0%
GGTTTACTCCTGCAATATTG+TGG + chr4_4:75809386-75809405 None:intergenic 40.0%
TGGTGCAAAGTGTGAAGTAA+CGG + chr4_4:75809407-75809426 None:intergenic 40.0%
AGTTCGGTTTCCGAAACTTA+TGG - chr4_4:75809616-75809635 Msa0703780:five_prime_UTR 40.0%
TCTGGAGAATGTGCTAAACA+AGG + chr4_4:75809646-75809665 None:intergenic 40.0%
TAAAAAGGGGGGAAAAGGTT+GGG + chr4_4:75809732-75809751 None:intergenic 40.0%
ATAAAAAGGGGGGAAAAGGT+TGG + chr4_4:75809733-75809752 None:intergenic 40.0%
GCCGGAACAGATTGATAAAA+AGG + chr4_4:75809747-75809766 None:intergenic 40.0%
AAGGAGGTAAACAAATGAGC+CGG + chr4_4:75809765-75809784 None:intergenic 40.0%
TCAGTAAAATGCGAACTGCA+AGG + chr4_4:75809965-75809984 None:intergenic 40.0%
TTACATGGTGATAACATGGG+TGG + chr4_4:75810076-75810095 None:intergenic 40.0%
!! GGTGTTGATGATTATGCTGC+CGG + chr4_4:75806297-75806316 Msa0703770:intron 45.0%
AAGGGATTGTAATGACGGTG+AGG - chr4_4:75806368-75806387 Msa0703780:three_prime_UTR 45.0%
AGGGATTGTAATGACGGTGA+GGG - chr4_4:75806369-75806388 Msa0703780:three_prime_UTR 45.0%
GATAAGATTGTGACTGCAGC+TGG - chr4_4:75806832-75806851 Msa0703780:intron 45.0%
TATCTATCTGCTAGAACGGG+TGG - chr4_4:75806937-75806956 Msa0703780:intron 45.0%
! GGTGGATTTCCAACACAAGA+TGG - chr4_4:75806955-75806974 Msa0703780:intron 45.0%
TTCCAACACAAGATGGCGAA+AGG - chr4_4:75806962-75806981 Msa0703780:intron 45.0%
TCCAACACAAGATGGCGAAA+GGG - chr4_4:75806963-75806982 Msa0703780:intron 45.0%
! AGATTTGAGTCTGATGGGTG+TGG - chr4_4:75806988-75807007 Msa0703780:intron 45.0%
! TTTTCAACCGCCGTTGAAAG+AGG - chr4_4:75807026-75807045 Msa0703780:intron 45.0%
! TCAACAACCAAAGGCACACT+AGG + chr4_4:75807054-75807073 None:intergenic 45.0%
TGCGGTTTATGATGCACTTC+CGG - chr4_4:75807128-75807147 Msa0703780:intron 45.0%
! GCACTTCCGGCTTTAATTCA+TGG - chr4_4:75807141-75807160 Msa0703780:intron 45.0%
CTTTGCAGCACATGGAAACA+TGG - chr4_4:75807287-75807306 Msa0703780:intron 45.0%
CTGCACGGTAGATTAGAGAT+AGG - chr4_4:75807493-75807512 Msa0703780:intron 45.0%
!!! ACAACTTTTGGGTTTGGTGG+TGG - chr4_4:75807621-75807640 Msa0703780:intron 45.0%
!!! CAACTTTTGGGTTTGGTGGT+GGG - chr4_4:75807622-75807641 Msa0703780:intron 45.0%
AGTAGCACACGGAGTTTAAC+GGG - chr4_4:75807984-75808003 Msa0703780:intron 45.0%
! CACCAAACACTGCTCCTTTT+CGG + chr4_4:75808195-75808214 None:intergenic 45.0%
CTCTTGTTGGATGGTTGAAG+GGG + chr4_4:75808232-75808251 None:intergenic 45.0%
ATGTGCACATCATAACCCGT+GGG + chr4_4:75808709-75808728 None:intergenic 45.0%
AATGTGCACATCATAACCCG+TGG + chr4_4:75808710-75808729 None:intergenic 45.0%
AACCCAAAAAATGAGGGCGA+CGG + chr4_4:75808820-75808839 None:intergenic 45.0%
!! TATCTCTGAGATTCAGCACG+AGG - chr4_4:75809199-75809218 Msa0703780:CDS 45.0%
!! ACCACTGACTTTCTAGCGAT+TGG - chr4_4:75809423-75809442 Msa0703780:CDS 45.0%
ACCAATCGCTAGAAAGTCAG+TGG + chr4_4:75809427-75809446 None:intergenic 45.0%
! ACTGACTTTCTAGCGATTGG+TGG - chr4_4:75809426-75809445 Msa0703780:CDS 45.0%
! CTGACTTTCTAGCGATTGGT+GGG - chr4_4:75809427-75809446 Msa0703780:CDS 45.0%
! TGACTTTCTAGCGATTGGTG+GGG - chr4_4:75809428-75809447 Msa0703780:CDS 45.0%
GTTCATGAGTCTGTGAGTGA+GGG + chr4_4:75809706-75809725 None:intergenic 45.0%
AAAAAGGGGGGAAAAGGTTG+GGG + chr4_4:75809731-75809750 None:intergenic 45.0%
TCTTTCCTCCATGCAGTTGT+GGG - chr4_4:75809830-75809849 Msa0703780:five_prime_UTR 45.0%
CTGAGTCATCATCGGTCACT+CGG + chr4_4:75806196-75806215 Msa0703770:intron 50.0%
TCGTGTCGTGTCTCAACAAC+CGG - chr4_4:75806257-75806276 Msa0703780:three_prime_UTR 50.0%
ACCGGAAAACGCTTCTACAC+CGG - chr4_4:75806275-75806294 Msa0703780:three_prime_UTR 50.0%
CAGTGGTGAGATCCGAAACA+AGG + chr4_4:75806517-75806536 Msa0703770:intron 50.0%
!! GAGGACGAGAGGGTTTGTTA+TGG + chr4_4:75806562-75806581 None:intergenic 50.0%
ACTATGGAAGGAGGACGAGA+GGG + chr4_4:75806572-75806591 None:intergenic 50.0%
TACTATGGAAGGAGGACGAG+AGG + chr4_4:75806573-75806592 None:intergenic 50.0%
GCAGTAAACGACGACGTATC+AGG + chr4_4:75806754-75806773 None:intergenic 50.0%
TCCCTTTCGCCATCTTGTGT+TGG + chr4_4:75806967-75806986 None:intergenic 50.0%
CTAGGTACCTCTTTCAACGG+CGG + chr4_4:75807036-75807055 None:intergenic 50.0%
!! AGAGGTACCTAGTGTGCCTT+TGG - chr4_4:75807044-75807063 Msa0703780:intron 50.0%
CAGGCCAAAGCATACTTCTC+CGG + chr4_4:75807334-75807353 None:intergenic 50.0%
TGTACCAGCAAACTAGGTCC+AGG + chr4_4:75807353-75807372 None:intergenic 50.0%
AACATGGGACTTCAACACGC+AGG + chr4_4:75808010-75808029 None:intergenic 50.0%
! CTTTTCGGTCTCCAACAACC+TGG + chr4_4:75808180-75808199 None:intergenic 50.0%
CAGGTTGTTGGAGACCGAAA+AGG - chr4_4:75808178-75808197 Msa0703780:CDS 50.0%
GACCGAAAAGGAGCAGTGTT+TGG - chr4_4:75808190-75808209 Msa0703780:intron 50.0%
CGAAAAGGAGCAGTGTTTGG+TGG - chr4_4:75808193-75808212 Msa0703780:intron 50.0%
ACTGTTGGGCGATATACGAC+AGG + chr4_4:75808410-75808429 None:intergenic 50.0%
AAAAAATGAGGGCGACGGGT+GGG + chr4_4:75808815-75808834 None:intergenic 50.0%
!!! ACCCGTCGCCCTCATTTTTT+GGG - chr4_4:75808815-75808834 Msa0703780:intron 50.0%
ACCCAAAAAATGAGGGCGAC+GGG + chr4_4:75808819-75808838 None:intergenic 50.0%
CAGAAGGCTCCCTACATTTC+TGG - chr4_4:75808848-75808867 Msa0703780:intron 50.0%
! GACTTTCTAGCGATTGGTGG+GGG - chr4_4:75809429-75809448 Msa0703780:CDS 50.0%
GGTTCATGAGTCTGTGAGTG+AGG + chr4_4:75809707-75809726 None:intergenic 50.0%
CTCTTTCCTCCATGCAGTTG+TGG - chr4_4:75809829-75809848 Msa0703780:five_prime_UTR 50.0%
CTTTCCTCCATGCAGTTGTG+GGG - chr4_4:75809831-75809850 Msa0703780:five_prime_UTR 50.0%
TACAAAGCCCCACAACTGCA+TGG + chr4_4:75809841-75809860 None:intergenic 50.0%
!! TTGAGCAAAACAGAGGCACC+TGG - chr4_4:75809891-75809910 Msa0703780:five_prime_UTR 50.0%
!! TGAGCAAAACAGAGGCACCT+GGG - chr4_4:75809892-75809911 Msa0703780:five_prime_UTR 50.0%
ATTTACCAGCGAGAGATCCC+AGG + chr4_4:75809912-75809931 None:intergenic 50.0%
AGTCATCATCGGTCACTCGG+CGG + chr4_4:75806193-75806212 Msa0703770:intron 55.0%
!!! GCCGGTGTAGAAGCGTTTTC+CGG + chr4_4:75806279-75806298 Msa0703770:intron 55.0%
ATTGTGACTGCAGCTGGAGC+TGG - chr4_4:75806838-75806857 Msa0703780:intron 55.0%
! TGAGTCTGATGGGTGTGGTG+TGG - chr4_4:75806993-75807012 Msa0703780:intron 55.0%
! CGGAGAAGTATGCTTTGGCC+TGG - chr4_4:75807332-75807351 Msa0703780:intron 55.0%
! TTGGCCTGGACCTAGTTTGC+TGG - chr4_4:75807346-75807365 Msa0703780:intron 55.0%
! AGGAGCAGTGTTTGGTGGCT+TGG - chr4_4:75808198-75808217 Msa0703780:intron 55.0%
CAAAAAATGAGGGCGACGGG+TGG + chr4_4:75808816-75808835 None:intergenic 55.0%
!!! CACCCGTCGCCCTCATTTTT+TGG - chr4_4:75808814-75808833 Msa0703780:intron 55.0%
! TTTCTAGCGATTGGTGGGGG+AGG - chr4_4:75809432-75809451 Msa0703780:CDS 55.0%
AAAGCCCCACAACTGCATGG+AGG + chr4_4:75809838-75809857 None:intergenic 55.0%
AAGGGGGGAAAAGGTTGGGG+AGG + chr4_4:75809728-75809747 None:intergenic 60.0%
AGGCACCTGGGATCTCTCGC+TGG - chr4_4:75809904-75809923 Msa0703780:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 75806180 75810202 75806180 ID=Msa0703780;Name=Msa0703780
chr4_4 mRNA 75806180 75810202 75806180 ID=Msa0703780-mRNA-1;Parent=Msa0703780;Name=Msa0703780-mRNA-1;_AED=0.11;_eAED=0.11;_QI=584|0.4|0.5|1|0.6|0.5|6|441|157
chr4_4 exon 75806180 75806536 75806180 ID=Msa0703780-mRNA-1:exon:23902;Parent=Msa0703780-mRNA-1
chr4_4 exon 75806695 75806779 75806695 ID=Msa0703780-mRNA-1:exon:23901;Parent=Msa0703780-mRNA-1
chr4_4 exon 75808119 75808201 75808119 ID=Msa0703780-mRNA-1:exon:23900;Parent=Msa0703780-mRNA-1
chr4_4 exon 75809015 75809087 75809015 ID=Msa0703780-mRNA-1:exon:23899;Parent=Msa0703780-mRNA-1
chr4_4 exon 75809195 75809685 75809195 ID=Msa0703780-mRNA-1:exon:23898;Parent=Msa0703780-mRNA-1
chr4_4 exon 75809793 75810202 75809793 ID=Msa0703780-mRNA-1:exon:23897;Parent=Msa0703780-mRNA-1
chr4_4 five_prime_UTR 75809793 75810202 75809793 ID=Msa0703780-mRNA-1:five_prime_utr;Parent=Msa0703780-mRNA-1
chr4_4 five_prime_UTR 75809512 75809685 75809512 ID=Msa0703780-mRNA-1:five_prime_utr;Parent=Msa0703780-mRNA-1
chr4_4 CDS 75809195 75809511 75809195 ID=Msa0703780-mRNA-1:cds;Parent=Msa0703780-mRNA-1
chr4_4 CDS 75809015 75809087 75809015 ID=Msa0703780-mRNA-1:cds;Parent=Msa0703780-mRNA-1
chr4_4 CDS 75808119 75808201 75808119 ID=Msa0703780-mRNA-1:cds;Parent=Msa0703780-mRNA-1
chr4_4 CDS 75806779 75806779 75806779 ID=Msa0703780-mRNA-1:cds;Parent=Msa0703780-mRNA-1
chr4_4 three_prime_UTR 75806695 75806778 75806695 ID=Msa0703780-mRNA-1:three_prime_utr;Parent=Msa0703780-mRNA-1
chr4_4 three_prime_UTR 75806180 75806536 75806180 ID=Msa0703780-mRNA-1:three_prime_utr;Parent=Msa0703780-mRNA-1
Gene Sequence

>Msa0703780

ATGAATGAGAAATTGGTTGTCAAGAAGGGATTGTTATCTAGGGGTAAACAATCACTCAAAGCTATTTATCTATCTGCTAGAACGGGTGGATTTCCAACACAAGATGGCGAAAGGGATAGATTTGAGTCTGATGGGTGTGGTGTGGAGATGAAATGTTTTCAACCGCCGTTGAAAGAGGTACCTAGTGTGCCTTTGGTTGTTGATCATTTGCCGGAAATATCGGAACCTTCAATGTTGATTTCAAATAGTTTGAGGAATGCGGTTTATGATGCACTTCCGGCTTTAATTCATGGGAAGAACTGGTTAATGATGTACAGCACATGGAAACATGGGATATCACTTTCAACTCTTTACCGGAGAAGTATGCTTTGGCCTGGACCTAGTTTGCTGGTTGTTGGAGACCGAAAAGGAGCAGTGTTTGGTGGCTTGGTTGAAGCACCCCTTCAACCATCCAACAAGAGAAAATACCAGTGA

Protein sequence

>Msa0703780

MNEKLVVKKGLLSRGKQSLKAIYLSARTGGFPTQDGERDRFESDGCGVEMKCFQPPLKEVPSVPLVVDHLPEISEPSMLISNSLRNAVYDALPALIHGKNWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVVGDRKGAVFGGLVEAPLQPSNKRKYQ*