Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190610 | XP_024632604.1 | 99.237 | 262 | 2 | 0 | 1 | 262 | 1 | 262 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190610 | sp|Q0WPN7|CGR3_ARATH | 67.954 | 259 | 79 | 2 | 1 | 259 | 1 | 255 | 6.10e-131 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190610 | G7IFC6 | 99.237 | 262 | 2 | 0 | 1 | 262 | 1 | 262 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0190610 | Msa0232810 | 0.982975 | 1.702384e-156 | -8.615850e-47 |
| Msa0190610 | Msa0810060 | 0.801258 | 9.802899e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190610 | MtrunA17_Chr2g0280271 | 99.237 | 262 | 2 | 0 | 1 | 262 | 1 | 262 | 0.0 | 527 |
| Msa0190610 | MtrunA17_Chr1g0152041 | 61.154 | 260 | 90 | 1 | 1 | 260 | 2 | 250 | 9.47e-118 | 337 |
| Msa0190610 | MtrunA17_Chr4g0054361 | 59.770 | 261 | 102 | 2 | 1 | 261 | 1 | 258 | 1.14e-112 | 324 |
| Msa0190610 | MtrunA17_Chr3g0140311 | 60.870 | 46 | 15 | 1 | 215 | 260 | 1 | 43 | 2.43e-14 | 65.9 |
| Msa0190610 | MtrunA17_Chr3g0140301 | 50.000 | 84 | 32 | 4 | 128 | 211 | 4 | 77 | 1.99e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190610 | AT5G65810.1 | 67.954 | 259 | 79 | 2 | 1 | 259 | 1 | 255 | 6.21e-132 | 374 |
| Msa0190610 | AT3G49720.2 | 67.954 | 259 | 82 | 1 | 1 | 259 | 1 | 258 | 1.62e-131 | 372 |
| Msa0190610 | AT3G49720.1 | 67.954 | 259 | 82 | 1 | 1 | 259 | 1 | 258 | 1.62e-131 | 372 |
| Msa0190610 | AT3G49720.3 | 67.954 | 259 | 82 | 1 | 1 | 259 | 1 | 258 | 1.62e-131 | 372 |
Find 89 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCAACCAACCTAAATT+TGG | 0.131700 | 2_1:+6104272 | Msa0190610:five_prime_UTR |
| TCTATAGTATGTATTAATTT+AGG | 0.190761 | 2_1:+6108591 | Msa0190610:three_prime_UTR |
| ACTTACTGGACGACCAAATT+TGG | 0.213230 | 2_1:-6107645 | None:intergenic |
| TCCGTATGCTTTCTTCAAAA+TGG | 0.218701 | 2_1:-6106883 | None:intergenic |
| TTGGAGTTGAACCCAAATTT+AGG | 0.262233 | 2_1:-6104284 | None:intergenic |
| AGCTGGTGCGTATGCCTTCT+TGG | 0.301244 | 2_1:-6108295 | None:intergenic |
| TCCGATCTTGACAAGATATT+AGG | 0.301396 | 2_1:+6108481 | Msa0190610:three_prime_UTR |
| CCAAGATGAGCTCCGCAATT+TGG | 0.304605 | 2_1:-6108199 | None:intergenic |
| AAGAGAATTATAATAATATT+AGG | 0.314918 | 2_1:-6108674 | None:intergenic |
| TAACAAGCCCGATAGATATC+AGG | 0.319119 | 2_1:-6105770 | None:intergenic |
| GGTTATTGTTACAGCAGTTC+AGG | 0.326523 | 2_1:+6106036 | Msa0190610:CDS |
| TGGAGCTAGCAATGATATTA+AGG | 0.333629 | 2_1:+6106614 | Msa0190610:CDS |
| TCTCTCATTCATTTCCAATC+TGG | 0.359716 | 2_1:+6104529 | Msa0190610:five_prime_UTR |
| CAATCAACCAACCTAAATTT+GGG | 0.365792 | 2_1:+6104273 | Msa0190610:five_prime_UTR |
| GGCGGAGAAGTAGCCAAATT+TGG | 0.368319 | 2_1:+6107632 | Msa0190610:CDS |
| GTTAAGTTATGTACTTCTAT+TGG | 0.378816 | 2_1:+6108503 | Msa0190610:three_prime_UTR |
| AGAAGACGATACCGAGGCTT+GGG | 0.387166 | 2_1:+6106971 | Msa0190610:CDS |
| AGAAACCATACTGATGATTC+TGG | 0.392372 | 2_1:+6108390 | Msa0190610:three_prime_UTR |
| TGCTGGAAAGAAATTTGAAC+AGG | 0.393491 | 2_1:+6108266 | Msa0190610:CDS |
| CAGGGTGCGATTCTTCTGAT+TGG | 0.395461 | 2_1:+6106015 | Msa0190610:intron |
| CCGTATGCTTTCTTCAAAAT+GGG | 0.403348 | 2_1:-6106882 | None:intergenic |
| GGAGCTCATCTTGGTGGATA+AGG | 0.423715 | 2_1:+6108208 | Msa0190610:CDS |
| ATCTATCGGGCTTGTTATTG+TGG | 0.450269 | 2_1:+6105776 | Msa0190610:CDS |
| ATTTCATGCATAGGTTATCC+TGG | 0.462758 | 2_1:+6107593 | Msa0190610:intron |
| AACTCTCCCCTGATATCTAT+CGG | 0.469901 | 2_1:+6105762 | Msa0190610:CDS |
| AGGTGCCAGAATCATCAGTA+TGG | 0.470753 | 2_1:-6108395 | None:intergenic |
| GTGGAAAATAGTTACCAGAT+TGG | 0.470910 | 2_1:-6104543 | None:intergenic |
| TTAGAAGAAAATGAAACTGC+TGG | 0.472603 | 2_1:+6108249 | Msa0190610:CDS |
| TTCAACATAACATGTATGTA+TGG | 0.477410 | 2_1:-6108441 | None:intergenic |
| AATTCATTGTTACTTTATTG+AGG | 0.481673 | 2_1:+6108649 | Msa0190610:three_prime_UTR |
| TGAACAGGCTTCAGCCAAGA+AGG | 0.485365 | 2_1:+6108281 | Msa0190610:CDS |
| GTGAATCCTTCACGTCGGTT+AGG | 0.487899 | 2_1:+6105690 | Msa0190610:CDS |
| ATACCCTCACCAACTCTGGC+AGG | 0.488939 | 2_1:-6107169 | None:intergenic |
| TTGAGATTTAGACTGGATAG+AGG | 0.491555 | 2_1:-6105739 | None:intergenic |
| CCAAATTGCGGAGCTCATCT+TGG | 0.492291 | 2_1:+6108199 | Msa0190610:CDS |
| TGTCATTGTGTCCGATGCAT+TGG | 0.494785 | 2_1:+6107115 | Msa0190610:CDS |
| CCTCTAGCTCTCTGCTGACC+AGG | 0.495599 | 2_1:-6107611 | None:intergenic |
| GATACCACAGAACAAGAGTC+GGG | 0.505287 | 2_1:-6106936 | None:intergenic |
| TGGCCTCCTCGACATGTTAA+CGG | 0.505299 | 2_1:-6105667 | None:intergenic |
| TGGAGGAAGTATACCATTTG+TGG | 0.511761 | 2_1:+6105716 | Msa0190610:CDS |
| ACCTAATATCTTGTCAAGAT+CGG | 0.512727 | 2_1:-6108482 | None:intergenic |
| AAGGATCTGAGTAAACTTGA+AGG | 0.514521 | 2_1:+6106633 | Msa0190610:CDS |
| GACTTTGCACGGTAAGGTAG+AGG | 0.514622 | 2_1:-6107083 | None:intergenic |
| ATACGGAGACAGCATGCATA+AGG | 0.521175 | 2_1:+6106899 | Msa0190610:CDS |
| GCAGATACCCTCACCAACTC+TGG | 0.524164 | 2_1:-6107173 | None:intergenic |
| CCTTCACGTCGGTTAGGTGA+TGG | 0.525269 | 2_1:+6105696 | Msa0190610:CDS |
| GGAAATGACTTTGCACGGTA+AGG | 0.527062 | 2_1:-6107089 | None:intergenic |
| TAGAAGACGATACCGAGGCT+TGG | 0.527344 | 2_1:+6106970 | Msa0190610:CDS |
| ACTCTCCCCTGATATCTATC+GGG | 0.540055 | 2_1:+6105763 | Msa0190610:CDS |
| GACTGGATAGAGGCCACAAA+TGG | 0.541354 | 2_1:-6105729 | None:intergenic |
| AATTGCGGAGCTCATCTTGG+TGG | 0.544169 | 2_1:+6108202 | Msa0190610:CDS |
| AACAAGCCCGATAGATATCA+GGG | 0.551525 | 2_1:-6105769 | None:intergenic |
| CCTGGTCAGCAGAGAGCTAG+AGG | 0.552501 | 2_1:+6107611 | Msa0190610:CDS |
| AACCGACGTGAAGGATTCAC+TGG | 0.555283 | 2_1:-6105687 | None:intergenic |
| CTTATGCTATTGAATTGCTA+CGG | 0.557048 | 2_1:-6104340 | None:intergenic |
| AGTTGAACCCAAATTTAGGT+TGG | 0.558666 | 2_1:-6104280 | None:intergenic |
| GAACAAAACCCTGCCAGAGT+TGG | 0.565213 | 2_1:+6107160 | Msa0190610:CDS |
| AAACAAGTAACATGCGGCGT+CGG | 0.582310 | 2_1:+6104243 | None:intergenic |
| AAACCCTGCCAGAGTTGGTG+AGG | 0.591510 | 2_1:+6107165 | Msa0190610:CDS |
| CCTACGTCATCTAATTCGTA+TGG | 0.594478 | 2_1:-6107002 | None:intergenic |
| TGGCCCCGACTCTTGTTCTG+TGG | 0.597243 | 2_1:+6106932 | Msa0190610:CDS |
| AGATACCACAGAACAAGAGT+CGG | 0.604754 | 2_1:-6106937 | None:intergenic |
| CCATCACCTAACCGACGTGA+AGG | 0.607764 | 2_1:-6105696 | None:intergenic |
| GATTGGAAATGAATGAGAGA+AGG | 0.612339 | 2_1:-6104526 | None:intergenic |
| TGGTTCGATTCCCCAAGCCT+CGG | 0.614231 | 2_1:-6106982 | None:intergenic |
| TCTTTATGAAGGCCAAATTG+CGG | 0.617851 | 2_1:+6108187 | Msa0190610:intron |
| CTGGCACCTTGAGCACCCGA+AGG | 0.620069 | 2_1:+6108409 | Msa0190610:three_prime_UTR |
| TACCCTCACCAACTCTGGCA+GGG | 0.621646 | 2_1:-6107168 | None:intergenic |
| CAAGAGGAAATGACTTTGCA+CGG | 0.625773 | 2_1:-6107094 | None:intergenic |
| TGAAAAGATAACAACACCAT+CGG | 0.635505 | 2_1:-6107195 | None:intergenic |
| AATACATACTATAGAAACAG+AGG | 0.641084 | 2_1:-6108583 | None:intergenic |
| GCATCGGACACAATGACAAG+AGG | 0.644260 | 2_1:-6107110 | None:intergenic |
| AGATAAGTAATCCAATGCAT+CGG | 0.645009 | 2_1:-6107126 | None:intergenic |
| CTCATAAAACAAGTAACATG+CGG | 0.645489 | 2_1:+6104237 | None:intergenic |
| ATACATACTATAGAAACAGA+GGG | 0.654610 | 2_1:-6108582 | None:intergenic |
| TGGCACCTTGAGCACCCGAA+GGG | 0.656924 | 2_1:+6108410 | Msa0190610:three_prime_UTR |
| TCACGTCGGTTAGGTGATGG+AGG | 0.657353 | 2_1:+6105699 | Msa0190610:CDS |
| GAAGACGATACCGAGGCTTG+GGG | 0.657489 | 2_1:+6106972 | Msa0190610:CDS |
| TCATTGCCGTTAACATGTCG+AGG | 0.658069 | 2_1:+6105661 | Msa0190610:exon |
| AACCCTGCCAGAGTTGGTGA+GGG | 0.658724 | 2_1:+6107166 | Msa0190610:CDS |
| TTGGTGAGGGTATCTGCCGA+TGG | 0.659850 | 2_1:+6107179 | Msa0190610:CDS |
| GTTAGTAGAAGACGATACCG+AGG | 0.670198 | 2_1:+6106965 | Msa0190610:CDS |
| ACGCAAGGGCATTGTACGTG+TGG | 0.683907 | 2_1:+6107046 | Msa0190610:CDS |
| GGTCAGCAGAGAGCTAGAGG+CGG | 0.713516 | 2_1:+6107614 | Msa0190610:CDS |
| GGCCAGTGAATCCTTCACGT+CGG | 0.718310 | 2_1:+6105685 | Msa0190610:CDS |
| TTGCCGTTAACATGTCGAGG+AGG | 0.720606 | 2_1:+6105664 | Msa0190610:exon |
| ATACCACAGAACAAGAGTCG+GGG | 0.727034 | 2_1:-6106935 | None:intergenic |
| ACAAGCCCGATAGATATCAG+GGG | 0.734762 | 2_1:-6105768 | None:intergenic |
| CCATACGAATTAGATGACGT+AGG | 0.805684 | 2_1:+6107002 | Msa0190610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAAAATTCTTGTTTTA+TGG | - | chr2_1:6106092-6106111 | None:intergenic | 10.0% |
| !!! | TAAAACAAGAATTTTATATT+TGG | + | chr2_1:6106092-6106111 | Msa0190610:intron | 10.0% |
| !!! | AATTTGATTTCAATTTTTTT+TGG | + | chr2_1:6107683-6107702 | Msa0190610:intron | 10.0% |
| !!! | ATTTGATTTCAATTTTTTTT+GGG | + | chr2_1:6107684-6107703 | Msa0190610:intron | 10.0% |
| !! | AAGAGAATTATAATAATATT+AGG | - | chr2_1:6108677-6108696 | None:intergenic | 10.0% |
| !! | AAATGCATAATAAATGTAAA+AGG | - | chr2_1:6105404-6105423 | None:intergenic | 15.0% |
| !! | ATATATAGGATAAAGTAAAT+TGG | - | chr2_1:6105936-6105955 | None:intergenic | 15.0% |
| !!! | CAAAATCAATCATATTTTTT+TGG | + | chr2_1:6107399-6107418 | Msa0190610:intron | 15.0% |
| !! | ATTTGATATTATCTTTATGA+AGG | + | chr2_1:6108176-6108195 | Msa0190610:intron | 15.0% |
| !!! | TGTTTTTAAACTTGAATTAT+TGG | + | chr2_1:6108365-6108384 | Msa0190610:three_prime_UTR | 15.0% |
| !! | TCTATAGTATGTATTAATTT+AGG | + | chr2_1:6108591-6108610 | Msa0190610:three_prime_UTR | 15.0% |
| !!! | AGCAAATTATATGATTTTGA+AGG | - | chr2_1:6104656-6104675 | None:intergenic | 20.0% |
| !! | AAACCAAAAATTCAAAATCA+AGG | - | chr2_1:6104767-6104786 | None:intergenic | 20.0% |
| !! | ATGAAAAATCAAGCAAATAA+AGG | - | chr2_1:6105314-6105333 | None:intergenic | 20.0% |
| !! | AAAGTCAAAAGTTTATCATA+TGG | - | chr2_1:6106148-6106167 | None:intergenic | 20.0% |
| !!! | ATATGATAAACTTTTGACTT+TGG | + | chr2_1:6106147-6106166 | Msa0190610:intron | 20.0% |
| !! | TAATATTATGCAATTTCCTT+GGG | + | chr2_1:6106187-6106206 | Msa0190610:intron | 20.0% |
| !! | AATATAGTTAAAGAACAATG+AGG | + | chr2_1:6106301-6106320 | Msa0190610:intron | 20.0% |
| !! | GTAAATTGAAAAGAAAAAAG+TGG | + | chr2_1:6106478-6106497 | Msa0190610:intron | 20.0% |
| !! | ATGAATATGTTCTCATTAAT+TGG | + | chr2_1:6106524-6106543 | Msa0190610:intron | 20.0% |
| !! | TTGGTGAACTATATATTAAT+TGG | + | chr2_1:6106666-6106685 | Msa0190610:intron | 20.0% |
| !!! | TCTTTTCAGGTAATATATAT+TGG | + | chr2_1:6107210-6107229 | Msa0190610:intron | 20.0% |
| !! | TAAGATCATGAATTTAATCT+TGG | - | chr2_1:6107459-6107478 | None:intergenic | 20.0% |
| !! | AATAAATATTAGTCACTTAC+TGG | - | chr2_1:6107662-6107681 | None:intergenic | 20.0% |
| !! | TGTGTATTTCATGAAAATAA+TGG | + | chr2_1:6108054-6108073 | Msa0190610:intron | 20.0% |
| !! | GTGTATTTCATGAAAATAAT+GGG | + | chr2_1:6108055-6108074 | Msa0190610:intron | 20.0% |
| !!! | TTCTCATTCTAATTTTCTTT+TGG | + | chr2_1:6108152-6108171 | Msa0190610:intron | 20.0% |
| !!! | TCTCATTCTAATTTTCTTTT+GGG | + | chr2_1:6108153-6108172 | Msa0190610:intron | 20.0% |
| !!! | ACAAGACAATAAAATTTTCA+GGG | - | chr2_1:6108348-6108367 | None:intergenic | 20.0% |
| !!! | AACAAGACAATAAAATTTTC+AGG | - | chr2_1:6108349-6108368 | None:intergenic | 20.0% |
| !!! | AATTCATTGTTACTTTATTG+AGG | + | chr2_1:6108649-6108668 | Msa0190610:three_prime_UTR | 20.0% |
| !!! | ATTTTAACTAAACCCTTTTC+TGG | + | chr2_1:6104708-6104727 | Msa0190610:intron | 25.0% |
| !!! | TTTTAACTAAACCCTTTTCT+GGG | + | chr2_1:6104709-6104728 | Msa0190610:intron | 25.0% |
| !! | AAGCCTTGATTTTGAATTTT+TGG | + | chr2_1:6104761-6104780 | Msa0190610:intron | 25.0% |
| ! | TTTCTAACAAAAAATGCACT+AGG | - | chr2_1:6104834-6104853 | None:intergenic | 25.0% |
| ! | AGTGATGTGTTTGATTATAT+TGG | + | chr2_1:6104867-6104886 | Msa0190610:intron | 25.0% |
| !!! | AAGTTCTGAATTTTACTACA+CGG | + | chr2_1:6104909-6104928 | Msa0190610:intron | 25.0% |
| ! | AAAAACTGATCTTGAATTGA+TGG | + | chr2_1:6105209-6105228 | Msa0190610:intron | 25.0% |
| ! | TATTAATGCGTGTAAATTTG+TGG | + | chr2_1:6105240-6105259 | Msa0190610:intron | 25.0% |
| ! | AACACTTGATGTACTATAAA+AGG | + | chr2_1:6105565-6105584 | Msa0190610:intron | 25.0% |
| ! | AGGATAAAGTAAATTGGATT+AGG | - | chr2_1:6105930-6105949 | None:intergenic | 25.0% |
| !! | CCTGAAAATTTTGCAAAATT+CGG | - | chr2_1:6105999-6106018 | None:intergenic | 25.0% |
| !! | CGAATTTTGCAAAATTTTCA+GGG | + | chr2_1:6105997-6106016 | Msa0190610:intron | 25.0% |
| ! | CAAGGAAATTGCATAATATT+AGG | - | chr2_1:6106188-6106207 | None:intergenic | 25.0% |
| ! | CTAATATTATGCAATTTCCT+TGG | + | chr2_1:6106186-6106205 | Msa0190610:intron | 25.0% |
| !!! | GATGTTGACTTTAATTTGTT+TGG | + | chr2_1:6106574-6106593 | Msa0190610:intron | 25.0% |
| !! | ACTTGAAGGTACAATATATT+TGG | + | chr2_1:6106647-6106666 | Msa0190610:intron | 25.0% |
| !!! | ATCAATCATATTTTTTTGGC+TGG | + | chr2_1:6107403-6107422 | Msa0190610:intron | 25.0% |
| !! | TGATTTCTTATTTCATGCAT+AGG | + | chr2_1:6107584-6107603 | Msa0190610:intron | 25.0% |
| !!! | TTTTTTTTGGGTTGCATTAT+AGG | + | chr2_1:6107696-6107715 | Msa0190610:intron | 25.0% |
| !!! | CTAGTTTTACTTAAGAAGAT+AGG | + | chr2_1:6107767-6107786 | Msa0190610:intron | 25.0% |
| ! | TGACTATGTAAAATTCATGT+AGG | - | chr2_1:6107984-6108003 | None:intergenic | 25.0% |
| !! | ATGATTTAAGGTGAAAAACT+TGG | - | chr2_1:6108323-6108342 | None:intergenic | 25.0% |
| !! | CAAGACAATAAAATTTTCAG+GGG | - | chr2_1:6108347-6108366 | None:intergenic | 25.0% |
| ! | TTCAACATAACATGTATGTA+TGG | - | chr2_1:6108444-6108463 | None:intergenic | 25.0% |
| ! | GTTAAGTTATGTACTTCTAT+TGG | + | chr2_1:6108503-6108522 | Msa0190610:three_prime_UTR | 25.0% |
| ! | ATACATACTATAGAAACAGA+GGG | - | chr2_1:6108585-6108604 | None:intergenic | 25.0% |
| ! | AATACATACTATAGAAACAG+AGG | - | chr2_1:6108586-6108605 | None:intergenic | 25.0% |
| TCAATCAACCAACCTAAATT+TGG | + | chr2_1:6104272-6104291 | Msa0190610:five_prime_UTR | 30.0% | |
| CAATCAACCAACCTAAATTT+GGG | + | chr2_1:6104273-6104292 | Msa0190610:five_prime_UTR | 30.0% | |
| !!! | TATTGAGTTGCTTTTTGAGT+TGG | - | chr2_1:6104306-6104325 | None:intergenic | 30.0% |
| CTTATGCTATTGAATTGCTA+CGG | - | chr2_1:6104343-6104362 | None:intergenic | 30.0% | |
| GTTCTAGTACTTTAATTACG+CGG | + | chr2_1:6104419-6104438 | Msa0190610:intron | 30.0% | |
| TGAATGAAAGAATGAAAGAG+CGG | - | chr2_1:6104471-6104490 | None:intergenic | 30.0% | |
| GAAAGCAAAAGAAGGAAAAT+GGG | - | chr2_1:6104573-6104592 | None:intergenic | 30.0% | |
| AGAAAGCAAAAGAAGGAAAA+TGG | - | chr2_1:6104574-6104593 | None:intergenic | 30.0% | |
| AATGCATAGAAAGCAAAAGA+AGG | - | chr2_1:6104581-6104600 | None:intergenic | 30.0% | |
| AAGAAACAAAACCCAGAAAA+GGG | - | chr2_1:6104723-6104742 | None:intergenic | 30.0% | |
| !!! | AGTTCTGAATTTTACTACAC+GGG | + | chr2_1:6104910-6104929 | Msa0190610:intron | 30.0% |
| ! | CTATGAGTTACTTTGTATCT+TGG | + | chr2_1:6104960-6104979 | Msa0190610:intron | 30.0% |
| CGGTGTAGATTATTTAATGA+TGG | + | chr2_1:6105072-6105091 | Msa0190610:intron | 30.0% | |
| TTACTCAGTAGATTCAAGAT+CGG | - | chr2_1:6105129-6105148 | None:intergenic | 30.0% | |
| AAATCAAGCAAATAAAGGCT+AGG | - | chr2_1:6105309-6105328 | None:intergenic | 30.0% | |
| ! | TTTTCATAGAGATGTCATTC+TGG | + | chr2_1:6105327-6105346 | Msa0190610:intron | 30.0% |
| !!! | CTCAACTACTATTGATTTTG+TGG | + | chr2_1:6105438-6105457 | Msa0190610:intron | 30.0% |
| !!! | TACTATTGATTTTGTGGCAT+TGG | + | chr2_1:6105444-6105463 | Msa0190610:intron | 30.0% |
| TATCTATAACAAGACAGCTT+AGG | + | chr2_1:6105491-6105510 | Msa0190610:intron | 30.0% | |
| TTATTGCTAAAACTTGTGCT+AGG | + | chr2_1:6105629-6105648 | Msa0190610:intron | 30.0% | |
| ! | AGTAAATTGGATTAGGAGAA+AGG | - | chr2_1:6105923-6105942 | None:intergenic | 30.0% |
| GCAAACAGGGAAAAATATAT+AGG | - | chr2_1:6105950-6105969 | None:intergenic | 30.0% | |
| ! | CCGAATTTTGCAAAATTTTC+AGG | + | chr2_1:6105996-6106015 | Msa0190610:intron | 30.0% |
| ATGATGACAGAAAAATACAG+TGG | + | chr2_1:6106256-6106275 | Msa0190610:intron | 30.0% | |
| GATACAAACTGTATAAGTCA+AGG | - | chr2_1:6106359-6106378 | None:intergenic | 30.0% | |
| ATATGTTGACAGTATGAGAA+TGG | - | chr2_1:6106454-6106473 | None:intergenic | 30.0% | |
| ! | TGTTCACAATTTGAAATCAG+CGG | - | chr2_1:6106779-6106798 | None:intergenic | 30.0% |
| AGATAAGTAATCCAATGCAT+CGG | - | chr2_1:6107129-6107148 | None:intergenic | 30.0% | |
| TGAAAAGATAACAACACCAT+CGG | - | chr2_1:6107198-6107217 | None:intergenic | 30.0% | |
| TTAATCACATCTGCTATAAC+AGG | + | chr2_1:6107316-6107335 | Msa0190610:intron | 30.0% | |
| TATCAATGACGATTTGTGAT+TGG | + | chr2_1:6107341-6107360 | Msa0190610:intron | 30.0% | |
| ATCACATTCAACATGATTTG+TGG | - | chr2_1:6107526-6107545 | None:intergenic | 30.0% | |
| !! | ATATAACCCACTGATTTAGT+GGG | - | chr2_1:6107926-6107945 | None:intergenic | 30.0% |
| !! | AATATAACCCACTGATTTAG+TGG | - | chr2_1:6107927-6107946 | None:intergenic | 30.0% |
| TTAGAAGAAAATGAAACTGC+TGG | + | chr2_1:6108249-6108268 | Msa0190610:CDS | 30.0% | |
| !! | ATTTTCAGGGGTATGATTTA+AGG | - | chr2_1:6108335-6108354 | None:intergenic | 30.0% |
| ACCTAATATCTTGTCAAGAT+CGG | - | chr2_1:6108485-6108504 | None:intergenic | 30.0% | |
| AGTTGAACCCAAATTTAGGT+TGG | - | chr2_1:6104283-6104302 | None:intergenic | 35.0% | |
| TTGGAGTTGAACCCAAATTT+AGG | - | chr2_1:6104287-6104306 | None:intergenic | 35.0% | |
| GATTGGAAATGAATGAGAGA+AGG | - | chr2_1:6104529-6104548 | None:intergenic | 35.0% | |
| TCTCTCATTCATTTCCAATC+TGG | + | chr2_1:6104529-6104548 | Msa0190610:five_prime_UTR | 35.0% | |
| GTGGAAAATAGTTACCAGAT+TGG | - | chr2_1:6104546-6104565 | None:intergenic | 35.0% | |
| AAGAAGGAAAATGGGTATAG+TGG | - | chr2_1:6104565-6104584 | None:intergenic | 35.0% | |
| CAAGAAACAAAACCCAGAAA+AGG | - | chr2_1:6104724-6104743 | None:intergenic | 35.0% | |
| !! | GTTCTGAATTTTACTACACG+GGG | + | chr2_1:6104911-6104930 | Msa0190610:intron | 35.0% |
| CAAATCATGCCTCTATTTAG+CGG | + | chr2_1:6104986-6105005 | Msa0190610:intron | 35.0% | |
| GTCGTCCAATCTTAAATCAA+CGG | + | chr2_1:6105052-6105071 | Msa0190610:intron | 35.0% | |
| !! | CTACACCGTTGATTTAAGAT+TGG | - | chr2_1:6105060-6105079 | None:intergenic | 35.0% |
| GATCTTGAATCTACTGAGTA+AGG | + | chr2_1:6105128-6105147 | Msa0190610:intron | 35.0% | |
| !!! | ATTGATTTTGTGGCATTGGT+TGG | + | chr2_1:6105448-6105467 | Msa0190610:intron | 35.0% |
| TTGAGATTTAGACTGGATAG+AGG | - | chr2_1:6105742-6105761 | None:intergenic | 35.0% | |
| !!! | GAGAGTTTTGAGATTTAGAC+TGG | - | chr2_1:6105749-6105768 | None:intergenic | 35.0% |
| GAGAAAGGTAAACTGCAATT+GGG | - | chr2_1:6105908-6105927 | None:intergenic | 35.0% | |
| CGGCTCATTAATTATTCTGT+GGG | - | chr2_1:6105979-6105998 | None:intergenic | 35.0% | |
| TCGGCTCATTAATTATTCTG+TGG | - | chr2_1:6105980-6105999 | None:intergenic | 35.0% | |
| !!! | CTTGTTTTATGGCGACTTTA+AGG | - | chr2_1:6106081-6106100 | None:intergenic | 35.0% |
| ! | GGCATCTGAAACACAATATT+TGG | - | chr2_1:6106127-6106146 | None:intergenic | 35.0% |
| ! | TTCCTTGGGTTTGATAATCT+TGG | + | chr2_1:6106201-6106220 | Msa0190610:intron | 35.0% |
| ATCCAAGATTATCAAACCCA+AGG | - | chr2_1:6106206-6106225 | None:intergenic | 35.0% | |
| CCTAAGTCATGATGAAGAAA+AGG | - | chr2_1:6106233-6106252 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTCATCATGACTT+AGG | + | chr2_1:6106230-6106249 | Msa0190610:intron | 35.0% |
| TTTCTTCATCATGACTTAGG+AGG | + | chr2_1:6106233-6106252 | Msa0190610:intron | 35.0% | |
| !! | TGAGACTGGTTTAAGATCTA+TGG | - | chr2_1:6106393-6106412 | None:intergenic | 35.0% |
| ! | ATGACATGAAAGTATGAGCT+AGG | - | chr2_1:6106421-6106440 | None:intergenic | 35.0% |
| AAGTCAACATCAGCATCATT+AGG | - | chr2_1:6106565-6106584 | None:intergenic | 35.0% | |
| ATTTGTTTGGTCACATCACT+TGG | + | chr2_1:6106587-6106606 | Msa0190610:intron | 35.0% | |
| TGGAGCTAGCAATGATATTA+AGG | + | chr2_1:6106614-6106633 | Msa0190610:CDS | 35.0% | |
| AAGGATCTGAGTAAACTTGA+AGG | + | chr2_1:6106633-6106652 | Msa0190610:CDS | 35.0% | |
| CCGTATGCTTTCTTCAAAAT+GGG | - | chr2_1:6106885-6106904 | None:intergenic | 35.0% | |
| !! | CCCATTTTGAAGAAAGCATA+CGG | + | chr2_1:6106882-6106901 | Msa0190610:CDS | 35.0% |
| TCCGTATGCTTTCTTCAAAA+TGG | - | chr2_1:6106886-6106905 | None:intergenic | 35.0% | |
| TGCAAAAATCTTGTACGCAA+GGG | + | chr2_1:6107032-6107051 | Msa0190610:CDS | 35.0% | |
| !!! | AGGGTTTTGTTCAGGTATTT+TGG | - | chr2_1:6107152-6107171 | None:intergenic | 35.0% |
| !!! | GATGGTGTTGTTATCTTTTC+AGG | + | chr2_1:6107197-6107216 | Msa0190610:CDS | 35.0% |
| !!! | TCATATTTTTTTGGCTGGCT+AGG | + | chr2_1:6107408-6107427 | Msa0190610:intron | 35.0% |
| !!! | CATATTTTTTTGGCTGGCTA+GGG | + | chr2_1:6107409-6107428 | Msa0190610:intron | 35.0% |
| ATTTCATGCATAGGTTATCC+TGG | + | chr2_1:6107593-6107612 | Msa0190610:intron | 35.0% | |
| ! | AAGATAGGAAAGTACAGAGA+GGG | + | chr2_1:6107782-6107801 | Msa0190610:intron | 35.0% |
| ATGAATCCCACTAAATCAGT+GGG | + | chr2_1:6107917-6107936 | Msa0190610:intron | 35.0% | |
| ! | TTGAGTGTTAGAGAGTATGT+CGG | + | chr2_1:6108008-6108027 | Msa0190610:intron | 35.0% |
| TCTTTATGAAGGCCAAATTG+CGG | + | chr2_1:6108187-6108206 | Msa0190610:intron | 35.0% | |
| TGCTGGAAAGAAATTTGAAC+AGG | + | chr2_1:6108266-6108285 | Msa0190610:CDS | 35.0% | |
| AGAAACCATACTGATGATTC+TGG | + | chr2_1:6108390-6108409 | Msa0190610:three_prime_UTR | 35.0% | |
| ! | TGTATGGAACTTTTACCCTT+CGG | - | chr2_1:6108428-6108447 | None:intergenic | 35.0% |
| TCCGATCTTGACAAGATATT+AGG | + | chr2_1:6108481-6108500 | Msa0190610:three_prime_UTR | 35.0% | |
| !! | TCTATTTAGCGGACTATGGA+GGG | + | chr2_1:6104997-6105016 | Msa0190610:intron | 40.0% |
| !!! | GTCGTCGCTTTTATTGATCT+TGG | + | chr2_1:6105030-6105049 | Msa0190610:intron | 40.0% |
| TCAGTAGATTCAAGATCGGT+CGG | - | chr2_1:6105125-6105144 | None:intergenic | 40.0% | |
| ! | ACTGATCTTGAATTGATGGC+TGG | + | chr2_1:6105213-6105232 | Msa0190610:intron | 40.0% |
| ! | CTGATCTTGAATTGATGGCT+GGG | + | chr2_1:6105214-6105233 | Msa0190610:intron | 40.0% |
| AAATTTACCGAATCTGCGTC+TGG | + | chr2_1:6105269-6105288 | Msa0190610:intron | 40.0% | |
| CTACAAGTCAAAGTAACGAG+TGG | + | chr2_1:6105540-6105559 | Msa0190610:intron | 40.0% | |
| ! | TGGAGGAAGTATACCATTTG+TGG | + | chr2_1:6105716-6105735 | Msa0190610:CDS | 40.0% |
| AACTCTCCCCTGATATCTAT+CGG | + | chr2_1:6105762-6105781 | Msa0190610:CDS | 40.0% | |
| AACAAGCCCGATAGATATCA+GGG | - | chr2_1:6105772-6105791 | None:intergenic | 40.0% | |
| TAACAAGCCCGATAGATATC+AGG | - | chr2_1:6105773-6105792 | None:intergenic | 40.0% | |
| !! | ATCTATCGGGCTTGTTATTG+TGG | + | chr2_1:6105776-6105795 | Msa0190610:CDS | 40.0% |
| GGAGAAAGGTAAACTGCAAT+TGG | - | chr2_1:6105909-6105928 | None:intergenic | 40.0% | |
| GGTTATTGTTACAGCAGTTC+AGG | + | chr2_1:6106036-6106055 | Msa0190610:CDS | 40.0% | |
| AGTCATGATGAAGAAAAGGC+TGG | - | chr2_1:6106229-6106248 | None:intergenic | 40.0% | |
| TGTTGACAGTATGAGAATGG+CGG | - | chr2_1:6106451-6106470 | None:intergenic | 40.0% | |
| ! | CAACTCTTGTTTGTGTTTGC+AGG | + | chr2_1:6106822-6106841 | Msa0190610:intron | 40.0% |
| ! | ATGCATAAGGTTTTGCACGT+TGG | + | chr2_1:6106912-6106931 | Msa0190610:CDS | 40.0% |
| AGATACCACAGAACAAGAGT+CGG | - | chr2_1:6106940-6106959 | None:intergenic | 40.0% | |
| CCTACGTCATCTAATTCGTA+TGG | - | chr2_1:6107005-6107024 | None:intergenic | 40.0% | |
| CCATACGAATTAGATGACGT+AGG | + | chr2_1:6107002-6107021 | Msa0190610:CDS | 40.0% | |
| GTGCAAAAATCTTGTACGCA+AGG | + | chr2_1:6107031-6107050 | Msa0190610:CDS | 40.0% | |
| CAAGAGGAAATGACTTTGCA+CGG | - | chr2_1:6107097-6107116 | None:intergenic | 40.0% | |
| ACTTACTGGACGACCAAATT+TGG | - | chr2_1:6107648-6107667 | None:intergenic | 40.0% | |
| ! | GAAGATAGGAAAGTACAGAG+AGG | + | chr2_1:6107781-6107800 | Msa0190610:intron | 40.0% |
| !! | CAAGAAAAGAGTGTTCGAGA+GGG | - | chr2_1:6107883-6107902 | None:intergenic | 40.0% |
| !! | TCAAGAAAAGAGTGTTCGAG+AGG | - | chr2_1:6107884-6107903 | None:intergenic | 40.0% |
| CATGAATCCCACTAAATCAG+TGG | + | chr2_1:6107916-6107935 | Msa0190610:intron | 40.0% | |
| CTTAATCCAGCCAGGTAATA+GGG | - | chr2_1:6108119-6108138 | None:intergenic | 40.0% | |
| TTATTGACCTTAATCCAGCC+AGG | - | chr2_1:6108127-6108146 | None:intergenic | 40.0% | |
| ! | GTATGGAACTTTTACCCTTC+GGG | - | chr2_1:6108427-6108446 | None:intergenic | 40.0% |
| ! | TTTTACTACACGGGGCTTGA+TGG | + | chr2_1:6104919-6104938 | Msa0190610:intron | 45.0% |
| GGGGCTTGATGGAATTGTTT+GGG | + | chr2_1:6104930-6104949 | Msa0190610:intron | 45.0% | |
| !! | TGCCTCTATTTAGCGGACTA+TGG | + | chr2_1:6104993-6105012 | Msa0190610:intron | 45.0% |
| CTCCATAGTCCGCTAAATAG+AGG | - | chr2_1:6104998-6105017 | None:intergenic | 45.0% | |
| !! | CTCTATTTAGCGGACTATGG+AGG | + | chr2_1:6104996-6105015 | Msa0190610:intron | 45.0% |
| TAAAGGCTAGGCAACAACTG+TGG | - | chr2_1:6105297-6105316 | None:intergenic | 45.0% | |
| TGCACAGCTCATAGCACAAT+CGG | - | chr2_1:6105380-6105399 | None:intergenic | 45.0% | |
| !! | TTTGTGGCATTGGTTGGCAT+TGG | + | chr2_1:6105454-6105473 | Msa0190610:intron | 45.0% |
| TCATTGCCGTTAACATGTCG+AGG | + | chr2_1:6105661-6105680 | Msa0190610:exon | 45.0% | |
| ACTCTCCCCTGATATCTATC+GGG | + | chr2_1:6105763-6105782 | Msa0190610:CDS | 45.0% | |
| ACAAGCCCGATAGATATCAG+GGG | - | chr2_1:6105771-6105790 | None:intergenic | 45.0% | |
| !! | CTGTGGGTTGATAGCAAACA+GGG | - | chr2_1:6105963-6105982 | None:intergenic | 45.0% |
| !! | TCTGTGGGTTGATAGCAAAC+AGG | - | chr2_1:6105964-6105983 | None:intergenic | 45.0% |
| TGAGCTAGGTTCTATGAGAC+TGG | - | chr2_1:6106407-6106426 | None:intergenic | 45.0% | |
| ATACGGAGACAGCATGCATA+AGG | + | chr2_1:6106899-6106918 | Msa0190610:CDS | 45.0% | |
| ATACCACAGAACAAGAGTCG+GGG | - | chr2_1:6106938-6106957 | None:intergenic | 45.0% | |
| GATACCACAGAACAAGAGTC+GGG | - | chr2_1:6106939-6106958 | None:intergenic | 45.0% | |
| GTTAGTAGAAGACGATACCG+AGG | + | chr2_1:6106965-6106984 | Msa0190610:CDS | 45.0% | |
| GGAAATGACTTTGCACGGTA+AGG | - | chr2_1:6107092-6107111 | None:intergenic | 45.0% | |
| TGTCATTGTGTCCGATGCAT+TGG | + | chr2_1:6107115-6107134 | Msa0190610:CDS | 45.0% | |
| GCTAGGGCTATTATTCACCT+AGG | + | chr2_1:6107425-6107444 | Msa0190610:intron | 45.0% | |
| ! | TAATCTTGGTGACAGAGCCT+AGG | - | chr2_1:6107445-6107464 | None:intergenic | 45.0% |
| ACTGTTGTGTCCCTATTACC+TGG | + | chr2_1:6108106-6108125 | Msa0190610:intron | 45.0% | |
| CCTTAATCCAGCCAGGTAAT+AGG | - | chr2_1:6108120-6108139 | None:intergenic | 45.0% | |
| CCTATTACCTGGCTGGATTA+AGG | + | chr2_1:6108117-6108136 | Msa0190610:intron | 45.0% | |
| AGGTGAAAAACTTGGCAAGC+TGG | - | chr2_1:6108315-6108334 | None:intergenic | 45.0% | |
| AGGTGCCAGAATCATCAGTA+TGG | - | chr2_1:6108398-6108417 | None:intergenic | 45.0% | |
| CGGGGCTTGATGGAATTGTT+TGG | + | chr2_1:6104929-6104948 | Msa0190610:intron | 50.0% | |
| !! | TAGCGGACTATGGAGGGATT+TGG | + | chr2_1:6105003-6105022 | Msa0190610:intron | 50.0% |
| TGTGGTTCCAGACGCAGATT+CGG | - | chr2_1:6105279-6105298 | None:intergenic | 50.0% | |
| TTGCCGTTAACATGTCGAGG+AGG | + | chr2_1:6105664-6105683 | Msa0190610:exon | 50.0% | |
| TGGCCTCCTCGACATGTTAA+CGG | - | chr2_1:6105670-6105689 | None:intergenic | 50.0% | |
| AACCGACGTGAAGGATTCAC+TGG | - | chr2_1:6105690-6105709 | None:intergenic | 50.0% | |
| ! | GTGAATCCTTCACGTCGGTT+AGG | + | chr2_1:6105690-6105709 | Msa0190610:CDS | 50.0% |
| GACTGGATAGAGGCCACAAA+TGG | - | chr2_1:6105732-6105751 | None:intergenic | 50.0% | |
| CAGGGTGCGATTCTTCTGAT+TGG | + | chr2_1:6106015-6106034 | Msa0190610:intron | 50.0% | |
| GTTTGGTCACATCACTTGGC+AGG | + | chr2_1:6106591-6106610 | Msa0190610:intron | 50.0% | |
| TAGAAGACGATACCGAGGCT+TGG | + | chr2_1:6106970-6106989 | Msa0190610:CDS | 50.0% | |
| AGAAGACGATACCGAGGCTT+GGG | + | chr2_1:6106971-6106990 | Msa0190610:CDS | 50.0% | |
| GACTTTGCACGGTAAGGTAG+AGG | - | chr2_1:6107086-6107105 | None:intergenic | 50.0% | |
| GCATCGGACACAATGACAAG+AGG | - | chr2_1:6107113-6107132 | None:intergenic | 50.0% | |
| !!! | ACTCTGGCAGGGTTTTGTTC+AGG | - | chr2_1:6107160-6107179 | None:intergenic | 50.0% |
| GAACAAAACCCTGCCAGAGT+TGG | + | chr2_1:6107160-6107179 | Msa0190610:CDS | 50.0% | |
| GGCGGAGAAGTAGCCAAATT+TGG | + | chr2_1:6107632-6107651 | Msa0190610:CDS | 50.0% | |
| TTGTGTCCCTATTACCTGGC+TGG | + | chr2_1:6108110-6108129 | Msa0190610:intron | 50.0% | |
| CCAAGATGAGCTCCGCAATT+TGG | - | chr2_1:6108202-6108221 | None:intergenic | 50.0% | |
| CCAAATTGCGGAGCTCATCT+TGG | + | chr2_1:6108199-6108218 | Msa0190610:CDS | 50.0% | |
| AATTGCGGAGCTCATCTTGG+TGG | + | chr2_1:6108202-6108221 | Msa0190610:CDS | 50.0% | |
| ! | GGAGCTCATCTTGGTGGATA+AGG | + | chr2_1:6108208-6108227 | Msa0190610:CDS | 50.0% |
| TGAACAGGCTTCAGCCAAGA+AGG | + | chr2_1:6108281-6108300 | Msa0190610:CDS | 50.0% | |
| ! | TTTTACCCTTCGGGTGCTCA+AGG | - | chr2_1:6108418-6108437 | None:intergenic | 50.0% |
| GGCCAGTGAATCCTTCACGT+CGG | + | chr2_1:6105685-6105704 | Msa0190610:CDS | 55.0% | |
| CCATCACCTAACCGACGTGA+AGG | - | chr2_1:6105699-6105718 | None:intergenic | 55.0% | |
| ! | CCTTCACGTCGGTTAGGTGA+TGG | + | chr2_1:6105696-6105715 | Msa0190610:CDS | 55.0% |
| ! | TCACGTCGGTTAGGTGATGG+AGG | + | chr2_1:6105699-6105718 | Msa0190610:CDS | 55.0% |
| TGGTCACATCACTTGGCAGG+TGG | + | chr2_1:6106594-6106613 | Msa0190610:intron | 55.0% | |
| GAAGACGATACCGAGGCTTG+GGG | + | chr2_1:6106972-6106991 | Msa0190610:CDS | 55.0% | |
| TGGTTCGATTCCCCAAGCCT+CGG | - | chr2_1:6106985-6107004 | None:intergenic | 55.0% | |
| !! | ACGCAAGGGCATTGTACGTG+TGG | + | chr2_1:6107046-6107065 | Msa0190610:CDS | 55.0% |
| !! | AAACCCTGCCAGAGTTGGTG+AGG | + | chr2_1:6107165-6107184 | Msa0190610:CDS | 55.0% |
| !! | AACCCTGCCAGAGTTGGTGA+GGG | + | chr2_1:6107166-6107185 | Msa0190610:CDS | 55.0% |
| TACCCTCACCAACTCTGGCA+GGG | - | chr2_1:6107171-6107190 | None:intergenic | 55.0% | |
| ATACCCTCACCAACTCTGGC+AGG | - | chr2_1:6107172-6107191 | None:intergenic | 55.0% | |
| GCAGATACCCTCACCAACTC+TGG | - | chr2_1:6107176-6107195 | None:intergenic | 55.0% | |
| !! | TTGGTGAGGGTATCTGCCGA+TGG | + | chr2_1:6107179-6107198 | Msa0190610:CDS | 55.0% |
| AGCTGGTGCGTATGCCTTCT+TGG | - | chr2_1:6108298-6108317 | None:intergenic | 55.0% | |
| TGGCCCCGACTCTTGTTCTG+TGG | + | chr2_1:6106932-6106951 | Msa0190610:CDS | 60.0% | |
| !! | CCTCTAGCTCTCTGCTGACC+AGG | - | chr2_1:6107614-6107633 | None:intergenic | 60.0% |
| CCTGGTCAGCAGAGAGCTAG+AGG | + | chr2_1:6107611-6107630 | Msa0190610:CDS | 60.0% | |
| GGTCAGCAGAGAGCTAGAGG+CGG | + | chr2_1:6107614-6107633 | Msa0190610:CDS | 60.0% | |
| TGGCACCTTGAGCACCCGAA+GGG | + | chr2_1:6108410-6108429 | Msa0190610:three_prime_UTR | 60.0% | |
| CTGGCACCTTGAGCACCCGA+AGG | + | chr2_1:6108409-6108428 | Msa0190610:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 6104249 | 6108697 | 6104249 | ID=Msa0190610;Name=Msa0190610 |
| chr2_1 | mRNA | 6104249 | 6108697 | 6104249 | ID=Msa0190610-mRNA-1;Parent=Msa0190610;Name=Msa0190610-mRNA-1;_AED=0.04;_eAED=0.04;_QI=273|1|1|1|0.71|0.62|8|347|262 |
| chr2_1 | exon | 6104249 | 6104429 | 6104249 | ID=Msa0190610-mRNA-1:exon:2765;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6104483 | 6104550 | 6104483 | ID=Msa0190610-mRNA-1:exon:2766;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6105651 | 6105797 | 6105651 | ID=Msa0190610-mRNA-1:exon:2767;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6106018 | 6106057 | 6106018 | ID=Msa0190610-mRNA-1:exon:2768;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6106613 | 6106654 | 6106613 | ID=Msa0190610-mRNA-1:exon:2769;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6106844 | 6107218 | 6106844 | ID=Msa0190610-mRNA-1:exon:2770;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6107606 | 6107661 | 6107606 | ID=Msa0190610-mRNA-1:exon:2771;Parent=Msa0190610-mRNA-1 |
| chr2_1 | exon | 6108198 | 6108697 | 6108198 | ID=Msa0190610-mRNA-1:exon:2772;Parent=Msa0190610-mRNA-1 |
| chr2_1 | five_prime_UTR | 6104249 | 6104429 | 6104249 | ID=Msa0190610-mRNA-1:five_prime_utr;Parent=Msa0190610-mRNA-1 |
| chr2_1 | five_prime_UTR | 6104483 | 6104550 | 6104483 | ID=Msa0190610-mRNA-1:five_prime_utr;Parent=Msa0190610-mRNA-1 |
| chr2_1 | five_prime_UTR | 6105651 | 6105674 | 6105651 | ID=Msa0190610-mRNA-1:five_prime_utr;Parent=Msa0190610-mRNA-1 |
| chr2_1 | CDS | 6105675 | 6105797 | 6105675 | ID=Msa0190610-mRNA-1:cds;Parent=Msa0190610-mRNA-1 |
| chr2_1 | CDS | 6106018 | 6106057 | 6106018 | ID=Msa0190610-mRNA-1:cds;Parent=Msa0190610-mRNA-1 |
| chr2_1 | CDS | 6106613 | 6106654 | 6106613 | ID=Msa0190610-mRNA-1:cds;Parent=Msa0190610-mRNA-1 |
| chr2_1 | CDS | 6106844 | 6107218 | 6106844 | ID=Msa0190610-mRNA-1:cds;Parent=Msa0190610-mRNA-1 |
| chr2_1 | CDS | 6107606 | 6107661 | 6107606 | ID=Msa0190610-mRNA-1:cds;Parent=Msa0190610-mRNA-1 |
| chr2_1 | CDS | 6108198 | 6108350 | 6108198 | ID=Msa0190610-mRNA-1:cds;Parent=Msa0190610-mRNA-1 |
| chr2_1 | three_prime_UTR | 6108351 | 6108697 | 6108351 | ID=Msa0190610-mRNA-1:three_prime_utr;Parent=Msa0190610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
