Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232810 | XP_024632604.1 | 99.237 | 262 | 2 | 0 | 1 | 262 | 1 | 262 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232810 | sp|Q0WPN7|CGR3_ARATH | 67.954 | 259 | 79 | 2 | 1 | 259 | 1 | 255 | 6.10e-131 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232810 | G7IFC6 | 99.237 | 262 | 2 | 0 | 1 | 262 | 1 | 262 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0190610 | Msa0232810 | 0.982975 | 1.702384e-156 | -8.615850e-47 |
| Msa0218530 | Msa0232810 | 0.808492 | 3.015953e-50 | -8.615850e-47 |
| Msa0218650 | Msa0232810 | 0.803152 | 3.995434e-49 | -8.615850e-47 |
| Msa0232810 | Msa0258220 | 0.800161 | 1.641231e-48 | -8.615850e-47 |
| Msa0232810 | Msa0810060 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0232810 | Msa0850590 | 0.809306 | 2.020037e-50 | -8.615850e-47 |
| Msa0232810 | Msa1260490 | 0.813588 | 2.372631e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232810 | MtrunA17_Chr2g0280271 | 99.237 | 262 | 2 | 0 | 1 | 262 | 1 | 262 | 0.0 | 527 |
| Msa0232810 | MtrunA17_Chr1g0152041 | 61.154 | 260 | 90 | 1 | 1 | 260 | 2 | 250 | 9.47e-118 | 337 |
| Msa0232810 | MtrunA17_Chr4g0054361 | 59.770 | 261 | 102 | 2 | 1 | 261 | 1 | 258 | 1.14e-112 | 324 |
| Msa0232810 | MtrunA17_Chr3g0140311 | 60.870 | 46 | 15 | 1 | 215 | 260 | 1 | 43 | 2.43e-14 | 65.9 |
| Msa0232810 | MtrunA17_Chr3g0140301 | 50.000 | 84 | 32 | 4 | 128 | 211 | 4 | 77 | 1.99e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232810 | AT5G65810.1 | 67.954 | 259 | 79 | 2 | 1 | 259 | 1 | 255 | 6.21e-132 | 374 |
| Msa0232810 | AT3G49720.2 | 67.954 | 259 | 82 | 1 | 1 | 259 | 1 | 258 | 1.62e-131 | 372 |
| Msa0232810 | AT3G49720.1 | 67.954 | 259 | 82 | 1 | 1 | 259 | 1 | 258 | 1.62e-131 | 372 |
| Msa0232810 | AT3G49720.3 | 67.954 | 259 | 82 | 1 | 1 | 259 | 1 | 258 | 1.62e-131 | 372 |
Find 93 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCAACCAACCTAAATT+TGG | 0.131700 | 2_2:+5057990 | Msa0232810:five_prime_UTR |
| GATATAATCTTGAAGGAAAA+TGG | 0.188921 | 2_2:-5058236 | None:intergenic |
| TCTATAGTATGTATTAATTT+AGG | 0.190761 | 2_2:+5062237 | Msa0232810:three_prime_UTR |
| ACTTACTGGACGACCAAATT+TGG | 0.213230 | 2_2:-5061291 | None:intergenic |
| TCCGTATGCTTTCTTCAAAA+TGG | 0.218701 | 2_2:-5060529 | None:intergenic |
| TTGGAGTTGAACCCAAATTT+AGG | 0.262233 | 2_2:-5058002 | None:intergenic |
| AGCTGGTGCGTATGCCTTCT+TGG | 0.301244 | 2_2:-5061941 | None:intergenic |
| TCCGATCTTGACAAGATATT+AGG | 0.301396 | 2_2:+5062127 | Msa0232810:three_prime_UTR |
| CCAAGATGAGCTCCGCAATT+TGG | 0.304605 | 2_2:-5061845 | None:intergenic |
| AAGAGAATTATAATAATATT+AGG | 0.314918 | 2_2:-5062320 | None:intergenic |
| TAACAAGCCCGATAGATATC+AGG | 0.319119 | 2_2:-5059416 | None:intergenic |
| GGTTATTGTTACAGCAGTTC+AGG | 0.326523 | 2_2:+5059682 | Msa0232810:CDS |
| TGGAGCTAGCAATGATATTA+AGG | 0.333629 | 2_2:+5060260 | Msa0232810:CDS |
| TCTCTCATTCATTTCCAATC+TGG | 0.359716 | 2_2:+5058194 | Msa0232810:five_prime_UTR |
| CAATCAACCAACCTAAATTT+GGG | 0.365792 | 2_2:+5057991 | Msa0232810:five_prime_UTR |
| GGCGGAGAAGTAGCCAAATT+TGG | 0.368319 | 2_2:+5061278 | Msa0232810:CDS |
| GTTAAGTTATGTACTTCTAT+TGG | 0.378816 | 2_2:+5062149 | Msa0232810:three_prime_UTR |
| AGAAGACGATACCGAGGCTT+GGG | 0.387166 | 2_2:+5060617 | Msa0232810:CDS |
| AGAAACCATACTGATGATTC+TGG | 0.392372 | 2_2:+5062036 | Msa0232810:three_prime_UTR |
| TGCTGGAAAGAAATTTGAAC+AGG | 0.393491 | 2_2:+5061912 | Msa0232810:CDS |
| CAGGGTGCGATTCTTCTGAT+TGG | 0.395461 | 2_2:+5059661 | Msa0232810:intron |
| CCGTATGCTTTCTTCAAAAT+GGG | 0.403348 | 2_2:-5060528 | None:intergenic |
| AATGAAAGATATAATCTTGA+AGG | 0.409948 | 2_2:-5058243 | None:intergenic |
| GGAGCTCATCTTGGTGGATA+AGG | 0.423715 | 2_2:+5061854 | Msa0232810:CDS |
| ATATAATCTTGAAGGAAAAT+GGG | 0.438386 | 2_2:-5058235 | None:intergenic |
| TTGAAGGAAAATGGGTATAG+TGG | 0.441950 | 2_2:-5058227 | None:intergenic |
| ATCTATCGGGCTTGTTATTG+TGG | 0.450269 | 2_2:+5059422 | Msa0232810:CDS |
| ATTTCATGCATAGGTTATCC+TGG | 0.462758 | 2_2:+5061239 | Msa0232810:intron |
| AACTCTCCCCTGATATCTAT+CGG | 0.469901 | 2_2:+5059408 | Msa0232810:CDS |
| AGGTGCCAGAATCATCAGTA+TGG | 0.470753 | 2_2:-5062041 | None:intergenic |
| GTGGAAAATAGTTACCAGAT+TGG | 0.470910 | 2_2:-5058208 | None:intergenic |
| TTAGAAGAAAATGAAACTGC+TGG | 0.472603 | 2_2:+5061895 | Msa0232810:CDS |
| TTCAACATAACATGTATGTA+TGG | 0.477410 | 2_2:-5062087 | None:intergenic |
| AATTCATTGTTACTTTATTG+AGG | 0.481673 | 2_2:+5062295 | Msa0232810:three_prime_UTR |
| TGAACAGGCTTCAGCCAAGA+AGG | 0.485365 | 2_2:+5061927 | Msa0232810:CDS |
| GTGAATCCTTCACGTCGGTT+AGG | 0.487899 | 2_2:+5059336 | Msa0232810:CDS |
| ATACCCTCACCAACTCTGGC+AGG | 0.488939 | 2_2:-5060815 | None:intergenic |
| TTGAGATTTAGACTGGATAG+AGG | 0.491555 | 2_2:-5059385 | None:intergenic |
| CCAAATTGCGGAGCTCATCT+TGG | 0.492291 | 2_2:+5061845 | Msa0232810:CDS |
| TGTCATTGTGTCCGATGCAT+TGG | 0.494785 | 2_2:+5060761 | Msa0232810:CDS |
| CCTCTAGCTCTCTGCTGACC+AGG | 0.495599 | 2_2:-5061257 | None:intergenic |
| GATACCACAGAACAAGAGTC+GGG | 0.505287 | 2_2:-5060582 | None:intergenic |
| TGGCCTCCTCGACATGTTAA+CGG | 0.505299 | 2_2:-5059313 | None:intergenic |
| TGGAGGAAGTATACCATTTG+TGG | 0.511761 | 2_2:+5059362 | Msa0232810:CDS |
| ACCTAATATCTTGTCAAGAT+CGG | 0.512727 | 2_2:-5062128 | None:intergenic |
| AAGGATCTGAGTAAACTTGA+AGG | 0.514521 | 2_2:+5060279 | Msa0232810:CDS |
| GACTTTGCACGGTAAGGTAG+AGG | 0.514622 | 2_2:-5060729 | None:intergenic |
| ATACGGAGACAGCATGCATA+AGG | 0.521175 | 2_2:+5060545 | Msa0232810:CDS |
| GCAGATACCCTCACCAACTC+TGG | 0.524164 | 2_2:-5060819 | None:intergenic |
| CCTTCACGTCGGTTAGGTGA+TGG | 0.525269 | 2_2:+5059342 | Msa0232810:CDS |
| GGAAATGACTTTGCACGGTA+AGG | 0.527062 | 2_2:-5060735 | None:intergenic |
| TAGAAGACGATACCGAGGCT+TGG | 0.527344 | 2_2:+5060616 | Msa0232810:CDS |
| ACTCTCCCCTGATATCTATC+GGG | 0.540055 | 2_2:+5059409 | Msa0232810:CDS |
| GACTGGATAGAGGCCACAAA+TGG | 0.541354 | 2_2:-5059375 | None:intergenic |
| AATTGCGGAGCTCATCTTGG+TGG | 0.544169 | 2_2:+5061848 | Msa0232810:CDS |
| AACAAGCCCGATAGATATCA+GGG | 0.551525 | 2_2:-5059415 | None:intergenic |
| CCTGGTCAGCAGAGAGCTAG+AGG | 0.552501 | 2_2:+5061257 | Msa0232810:CDS |
| AACCGACGTGAAGGATTCAC+TGG | 0.555283 | 2_2:-5059333 | None:intergenic |
| CTTATGCTATTGAATTGCTA+CGG | 0.557048 | 2_2:-5058058 | None:intergenic |
| AGTTGAACCCAAATTTAGGT+TGG | 0.558666 | 2_2:-5057998 | None:intergenic |
| GAACAAAACCCTGCCAGAGT+TGG | 0.565213 | 2_2:+5060806 | Msa0232810:CDS |
| AAACAAGTAACATGCGGCGT+CGG | 0.582310 | 2_2:+5057961 | Msa0232810:five_prime_UTR |
| AAACCCTGCCAGAGTTGGTG+AGG | 0.591510 | 2_2:+5060811 | Msa0232810:CDS |
| CCTACGTCATCTAATTCGTA+TGG | 0.594478 | 2_2:-5060648 | None:intergenic |
| TGGCCCCGACTCTTGTTCTG+TGG | 0.597243 | 2_2:+5060578 | Msa0232810:CDS |
| AGATACCACAGAACAAGAGT+CGG | 0.604754 | 2_2:-5060583 | None:intergenic |
| CCATCACCTAACCGACGTGA+AGG | 0.607764 | 2_2:-5059342 | None:intergenic |
| GATTGGAAATGAATGAGAGA+AGG | 0.612339 | 2_2:-5058191 | None:intergenic |
| TGGTTCGATTCCCCAAGCCT+CGG | 0.614231 | 2_2:-5060628 | None:intergenic |
| TCTTTATGAAGGCCAAATTG+CGG | 0.617851 | 2_2:+5061833 | Msa0232810:intron |
| CTGGCACCTTGAGCACCCGA+AGG | 0.620069 | 2_2:+5062055 | Msa0232810:three_prime_UTR |
| TACCCTCACCAACTCTGGCA+GGG | 0.621646 | 2_2:-5060814 | None:intergenic |
| CAAGAGGAAATGACTTTGCA+CGG | 0.625773 | 2_2:-5060740 | None:intergenic |
| TGAAAAGATAACAACACCAT+CGG | 0.635505 | 2_2:-5060841 | None:intergenic |
| AATACATACTATAGAAACAG+AGG | 0.641084 | 2_2:-5062229 | None:intergenic |
| GCATCGGACACAATGACAAG+AGG | 0.644260 | 2_2:-5060756 | None:intergenic |
| AGATAAGTAATCCAATGCAT+CGG | 0.645009 | 2_2:-5060772 | None:intergenic |
| CTCATAAAACAAGTAACATG+CGG | 0.645489 | 2_2:+5057955 | None:intergenic |
| ATACATACTATAGAAACAGA+GGG | 0.654610 | 2_2:-5062228 | None:intergenic |
| TGGCACCTTGAGCACCCGAA+GGG | 0.656924 | 2_2:+5062056 | Msa0232810:three_prime_UTR |
| TCACGTCGGTTAGGTGATGG+AGG | 0.657353 | 2_2:+5059345 | Msa0232810:CDS |
| GAAGACGATACCGAGGCTTG+GGG | 0.657489 | 2_2:+5060618 | Msa0232810:CDS |
| TCATTGCCGTTAACATGTCG+AGG | 0.658069 | 2_2:+5059307 | Msa0232810:exon |
| AACCCTGCCAGAGTTGGTGA+GGG | 0.658724 | 2_2:+5060812 | Msa0232810:CDS |
| TTGGTGAGGGTATCTGCCGA+TGG | 0.659850 | 2_2:+5060825 | Msa0232810:CDS |
| GTTAGTAGAAGACGATACCG+AGG | 0.670198 | 2_2:+5060611 | Msa0232810:CDS |
| ACGCAAGGGCATTGTACGTG+TGG | 0.683907 | 2_2:+5060692 | Msa0232810:CDS |
| GGTCAGCAGAGAGCTAGAGG+CGG | 0.713516 | 2_2:+5061260 | Msa0232810:CDS |
| GGCCAGTGAATCCTTCACGT+CGG | 0.718310 | 2_2:+5059331 | Msa0232810:CDS |
| TTGCCGTTAACATGTCGAGG+AGG | 0.720606 | 2_2:+5059310 | Msa0232810:exon |
| ATACCACAGAACAAGAGTCG+GGG | 0.727034 | 2_2:-5060581 | None:intergenic |
| ACAAGCCCGATAGATATCAG+GGG | 0.734762 | 2_2:-5059414 | None:intergenic |
| CCATACGAATTAGATGACGT+AGG | 0.805684 | 2_2:+5060648 | Msa0232810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAAAATTCTTGTTTTA+TGG | - | chr2_2:5059738-5059757 | None:intergenic | 10.0% |
| !!! | TAAAACAAGAATTTTATATT+TGG | + | chr2_2:5059738-5059757 | Msa0232810:intron | 10.0% |
| !!! | AATTTGATTTCAATTTTTTT+TGG | + | chr2_2:5061329-5061348 | Msa0232810:intron | 10.0% |
| !!! | ATTTGATTTCAATTTTTTTT+GGG | + | chr2_2:5061330-5061349 | Msa0232810:intron | 10.0% |
| !! | AAGAGAATTATAATAATATT+AGG | - | chr2_2:5062323-5062342 | None:intergenic | 10.0% |
| !! | AAATGCATAATAAATGTAAA+AGG | - | chr2_2:5059050-5059069 | None:intergenic | 15.0% |
| !! | ATATATAGGATAAAGTAAAT+TGG | - | chr2_2:5059582-5059601 | None:intergenic | 15.0% |
| !!! | CAAAATCAATCATATTTTTT+TGG | + | chr2_2:5061045-5061064 | Msa0232810:intron | 15.0% |
| !! | ATTTGATATTATCTTTATGA+AGG | + | chr2_2:5061822-5061841 | Msa0232810:intron | 15.0% |
| !!! | TGTTTTTAAACTTGAATTAT+TGG | + | chr2_2:5062011-5062030 | Msa0232810:three_prime_UTR | 15.0% |
| !! | TCTATAGTATGTATTAATTT+AGG | + | chr2_2:5062237-5062256 | Msa0232810:three_prime_UTR | 15.0% |
| !! | ATATAATCTTGAAGGAAAAT+GGG | - | chr2_2:5058238-5058257 | None:intergenic | 20.0% |
| !! | AATGAAAGATATAATCTTGA+AGG | - | chr2_2:5058246-5058265 | None:intergenic | 20.0% |
| !!! | AGCAAATTATATGATTTTGA+AGG | - | chr2_2:5058302-5058321 | None:intergenic | 20.0% |
| !! | AAACCAAAAATTCAAAATCA+AGG | - | chr2_2:5058413-5058432 | None:intergenic | 20.0% |
| !! | ATGAAAAATCAAGCAAATAA+AGG | - | chr2_2:5058960-5058979 | None:intergenic | 20.0% |
| !! | TAATATTATGCAATTTCCTT+GGG | + | chr2_2:5059833-5059852 | Msa0232810:intron | 20.0% |
| !! | AATATAGTTAAAGAACAATG+AGG | + | chr2_2:5059947-5059966 | Msa0232810:intron | 20.0% |
| !! | GTAAATTGAAAAGAAAAAAG+TGG | + | chr2_2:5060124-5060143 | Msa0232810:intron | 20.0% |
| !! | ATGAATATGTTCTCATTAAT+TGG | + | chr2_2:5060170-5060189 | Msa0232810:intron | 20.0% |
| !!! | GATGTTGAATTTAATTTGTT+TGG | + | chr2_2:5060220-5060239 | Msa0232810:intron | 20.0% |
| !! | TTGGTGAACTATATATTAAT+TGG | + | chr2_2:5060312-5060331 | Msa0232810:intron | 20.0% |
| !!! | TCTTTTCAGGTAATATATAT+TGG | + | chr2_2:5060856-5060875 | Msa0232810:intron | 20.0% |
| !! | TAAGATCATGAATTTAATCT+TGG | - | chr2_2:5061105-5061124 | None:intergenic | 20.0% |
| !! | AATAAATATTAGTCACTTAC+TGG | - | chr2_2:5061308-5061327 | None:intergenic | 20.0% |
| !! | TGTGTATTTCATGAAAATAA+TGG | + | chr2_2:5061700-5061719 | Msa0232810:intron | 20.0% |
| !! | GTGTATTTCATGAAAATAAT+GGG | + | chr2_2:5061701-5061720 | Msa0232810:intron | 20.0% |
| !!! | TTCTCATTCTAATTTTCTTT+TGG | + | chr2_2:5061798-5061817 | Msa0232810:intron | 20.0% |
| !!! | TCTCATTCTAATTTTCTTTT+GGG | + | chr2_2:5061799-5061818 | Msa0232810:intron | 20.0% |
| !!! | ACAAGACAATAAAATTTTCA+GGG | - | chr2_2:5061994-5062013 | None:intergenic | 20.0% |
| !!! | AACAAGACAATAAAATTTTC+AGG | - | chr2_2:5061995-5062014 | None:intergenic | 20.0% |
| !!! | AATTCATTGTTACTTTATTG+AGG | + | chr2_2:5062295-5062314 | Msa0232810:three_prime_UTR | 20.0% |
| ! | GATATAATCTTGAAGGAAAA+TGG | - | chr2_2:5058239-5058258 | None:intergenic | 25.0% |
| !!! | ATTTTAACTAAACCCTTTTC+TGG | + | chr2_2:5058354-5058373 | Msa0232810:intron | 25.0% |
| !!! | TTTTAACTAAACCCTTTTCT+GGG | + | chr2_2:5058355-5058374 | Msa0232810:intron | 25.0% |
| !! | AAGCCTTGATTTTGAATTTT+TGG | + | chr2_2:5058407-5058426 | Msa0232810:intron | 25.0% |
| ! | TTTCTAACAAAAAATGCACT+AGG | - | chr2_2:5058480-5058499 | None:intergenic | 25.0% |
| ! | AGTGATGTGTTTGATTATAT+TGG | + | chr2_2:5058513-5058532 | Msa0232810:intron | 25.0% |
| !!! | AAGTTCTGAATTTTACTACA+CGG | + | chr2_2:5058555-5058574 | Msa0232810:intron | 25.0% |
| ! | AAAAACTGATCTTGAATTGA+TGG | + | chr2_2:5058855-5058874 | Msa0232810:intron | 25.0% |
| ! | TATTAATGCGTGTAAATTTG+TGG | + | chr2_2:5058886-5058905 | Msa0232810:intron | 25.0% |
| ! | AACACTTGATGTACTATAAA+AGG | + | chr2_2:5059211-5059230 | Msa0232810:intron | 25.0% |
| ! | AGGATAAAGTAAATTGGATT+AGG | - | chr2_2:5059576-5059595 | None:intergenic | 25.0% |
| !! | CCTGAAAATTTTGCAAAATT+CGG | - | chr2_2:5059645-5059664 | None:intergenic | 25.0% |
| !! | CGAATTTTGCAAAATTTTCA+GGG | + | chr2_2:5059643-5059662 | Msa0232810:intron | 25.0% |
| ! | AAAGTCAAAAGTTTATCGTA+TGG | - | chr2_2:5059794-5059813 | None:intergenic | 25.0% |
| !!! | ATACGATAAACTTTTGACTT+TGG | + | chr2_2:5059793-5059812 | Msa0232810:intron | 25.0% |
| ! | CAAGGAAATTGCATAATATT+AGG | - | chr2_2:5059834-5059853 | None:intergenic | 25.0% |
| ! | CTAATATTATGCAATTTCCT+TGG | + | chr2_2:5059832-5059851 | Msa0232810:intron | 25.0% |
| !! | ACTTGAAGGTACAATATATT+TGG | + | chr2_2:5060293-5060312 | Msa0232810:intron | 25.0% |
| !!! | ATCAATCATATTTTTTTGGC+TGG | + | chr2_2:5061049-5061068 | Msa0232810:intron | 25.0% |
| !! | TGATTTCTTATTTCATGCAT+AGG | + | chr2_2:5061230-5061249 | Msa0232810:intron | 25.0% |
| !!! | TTTTTTTTGGGTTGCATTAT+AGG | + | chr2_2:5061342-5061361 | Msa0232810:intron | 25.0% |
| !!! | CTAGTTTTACTTAAGAAGAT+AGG | + | chr2_2:5061413-5061432 | Msa0232810:intron | 25.0% |
| ! | TGACTATGTAAAATTCATGT+AGG | - | chr2_2:5061630-5061649 | None:intergenic | 25.0% |
| !! | ATGATTTAAGGTGAAAAACT+TGG | - | chr2_2:5061969-5061988 | None:intergenic | 25.0% |
| !! | CAAGACAATAAAATTTTCAG+GGG | - | chr2_2:5061993-5062012 | None:intergenic | 25.0% |
| ! | TTCAACATAACATGTATGTA+TGG | - | chr2_2:5062090-5062109 | None:intergenic | 25.0% |
| ! | GTTAAGTTATGTACTTCTAT+TGG | + | chr2_2:5062149-5062168 | Msa0232810:three_prime_UTR | 25.0% |
| ! | ATACATACTATAGAAACAGA+GGG | - | chr2_2:5062231-5062250 | None:intergenic | 25.0% |
| ! | AATACATACTATAGAAACAG+AGG | - | chr2_2:5062232-5062251 | None:intergenic | 25.0% |
| TCAATCAACCAACCTAAATT+TGG | + | chr2_2:5057990-5058009 | Msa0232810:five_prime_UTR | 30.0% | |
| CAATCAACCAACCTAAATTT+GGG | + | chr2_2:5057991-5058010 | Msa0232810:five_prime_UTR | 30.0% | |
| !!! | TATTGAGTTGCTTTTTGAGT+TGG | - | chr2_2:5058024-5058043 | None:intergenic | 30.0% |
| CTTATGCTATTGAATTGCTA+CGG | - | chr2_2:5058061-5058080 | None:intergenic | 30.0% | |
| AAGAAACAAAACCCAGAAAA+GGG | - | chr2_2:5058369-5058388 | None:intergenic | 30.0% | |
| !!! | AGTTCTGAATTTTACTACAC+GGG | + | chr2_2:5058556-5058575 | Msa0232810:intron | 30.0% |
| ! | CTATGAGTTACTTTGTATCT+TGG | + | chr2_2:5058606-5058625 | Msa0232810:intron | 30.0% |
| CGGTGTAGATTATTTAATGA+TGG | + | chr2_2:5058718-5058737 | Msa0232810:intron | 30.0% | |
| TTACTCAGTAGATTCAAGAT+CGG | - | chr2_2:5058775-5058794 | None:intergenic | 30.0% | |
| AAATCAAGCAAATAAAGGCT+AGG | - | chr2_2:5058955-5058974 | None:intergenic | 30.0% | |
| ! | TTTTCATAGAGATGTCATTC+TGG | + | chr2_2:5058973-5058992 | Msa0232810:intron | 30.0% |
| !!! | CTCAACTACTATTGATTTTG+TGG | + | chr2_2:5059084-5059103 | Msa0232810:intron | 30.0% |
| !!! | TACTATTGATTTTGTGGCAT+TGG | + | chr2_2:5059090-5059109 | Msa0232810:intron | 30.0% |
| TATCTATAACAAGACAGCTT+AGG | + | chr2_2:5059137-5059156 | Msa0232810:intron | 30.0% | |
| TTATTGCTAAAACTTGTGCT+AGG | + | chr2_2:5059275-5059294 | Msa0232810:intron | 30.0% | |
| ! | AGTAAATTGGATTAGGAGAA+AGG | - | chr2_2:5059569-5059588 | None:intergenic | 30.0% |
| GCAAACAGGGAAAAATATAT+AGG | - | chr2_2:5059596-5059615 | None:intergenic | 30.0% | |
| ! | CCGAATTTTGCAAAATTTTC+AGG | + | chr2_2:5059642-5059661 | Msa0232810:intron | 30.0% |
| ATGATGACAGAAAAATACAG+TGG | + | chr2_2:5059902-5059921 | Msa0232810:intron | 30.0% | |
| GATACAAACTGTATAAGTCA+AGG | - | chr2_2:5060005-5060024 | None:intergenic | 30.0% | |
| ATATGTTGACAGTATGAGAA+TGG | - | chr2_2:5060100-5060119 | None:intergenic | 30.0% | |
| AATTCAACATCAGCATCATT+AGG | - | chr2_2:5060211-5060230 | None:intergenic | 30.0% | |
| ! | TGTTCACAATTTGAAATCAG+CGG | - | chr2_2:5060425-5060444 | None:intergenic | 30.0% |
| AGATAAGTAATCCAATGCAT+CGG | - | chr2_2:5060775-5060794 | None:intergenic | 30.0% | |
| TGAAAAGATAACAACACCAT+CGG | - | chr2_2:5060844-5060863 | None:intergenic | 30.0% | |
| TTAATCACATCTGCTATAAC+AGG | + | chr2_2:5060962-5060981 | Msa0232810:intron | 30.0% | |
| TATCAATGACGATTTGTGAT+TGG | + | chr2_2:5060987-5061006 | Msa0232810:intron | 30.0% | |
| ATCACATTCAACATGATTTG+TGG | - | chr2_2:5061172-5061191 | None:intergenic | 30.0% | |
| !! | ATATAACCCACTGATTTAGT+GGG | - | chr2_2:5061572-5061591 | None:intergenic | 30.0% |
| !! | AATATAACCCACTGATTTAG+TGG | - | chr2_2:5061573-5061592 | None:intergenic | 30.0% |
| TTAGAAGAAAATGAAACTGC+TGG | + | chr2_2:5061895-5061914 | Msa0232810:CDS | 30.0% | |
| !! | ATTTTCAGGGGTATGATTTA+AGG | - | chr2_2:5061981-5062000 | None:intergenic | 30.0% |
| ACCTAATATCTTGTCAAGAT+CGG | - | chr2_2:5062131-5062150 | None:intergenic | 30.0% | |
| AGTTGAACCCAAATTTAGGT+TGG | - | chr2_2:5058001-5058020 | None:intergenic | 35.0% | |
| TTGGAGTTGAACCCAAATTT+AGG | - | chr2_2:5058005-5058024 | None:intergenic | 35.0% | |
| GATTGGAAATGAATGAGAGA+AGG | - | chr2_2:5058194-5058213 | None:intergenic | 35.0% | |
| TCTCTCATTCATTTCCAATC+TGG | + | chr2_2:5058194-5058213 | Msa0232810:five_prime_UTR | 35.0% | |
| GTGGAAAATAGTTACCAGAT+TGG | - | chr2_2:5058211-5058230 | None:intergenic | 35.0% | |
| TTGAAGGAAAATGGGTATAG+TGG | - | chr2_2:5058230-5058249 | None:intergenic | 35.0% | |
| CAAGAAACAAAACCCAGAAA+AGG | - | chr2_2:5058370-5058389 | None:intergenic | 35.0% | |
| !! | GTTCTGAATTTTACTACACG+GGG | + | chr2_2:5058557-5058576 | Msa0232810:intron | 35.0% |
| CAAATCATGCCTCTATTTAG+CGG | + | chr2_2:5058632-5058651 | Msa0232810:intron | 35.0% | |
| GTCGTCCAATCTTAAATCAA+CGG | + | chr2_2:5058698-5058717 | Msa0232810:intron | 35.0% | |
| !! | CTACACCGTTGATTTAAGAT+TGG | - | chr2_2:5058706-5058725 | None:intergenic | 35.0% |
| GATCTTGAATCTACTGAGTA+AGG | + | chr2_2:5058774-5058793 | Msa0232810:intron | 35.0% | |
| !!! | ATTGATTTTGTGGCATTGGT+TGG | + | chr2_2:5059094-5059113 | Msa0232810:intron | 35.0% |
| TTGAGATTTAGACTGGATAG+AGG | - | chr2_2:5059388-5059407 | None:intergenic | 35.0% | |
| !!! | GAGAGTTTTGAGATTTAGAC+TGG | - | chr2_2:5059395-5059414 | None:intergenic | 35.0% |
| GAGAAAGGTAAACTGCAATT+GGG | - | chr2_2:5059554-5059573 | None:intergenic | 35.0% | |
| CGGCTCATTAATTATTCTGT+GGG | - | chr2_2:5059625-5059644 | None:intergenic | 35.0% | |
| TCGGCTCATTAATTATTCTG+TGG | - | chr2_2:5059626-5059645 | None:intergenic | 35.0% | |
| !!! | CTTGTTTTATGGCGACTTTA+AGG | - | chr2_2:5059727-5059746 | None:intergenic | 35.0% |
| ! | GGCATCTGAAACACAATATT+TGG | - | chr2_2:5059773-5059792 | None:intergenic | 35.0% |
| ! | TTCCTTGGGTTTGATAATCT+TGG | + | chr2_2:5059847-5059866 | Msa0232810:intron | 35.0% |
| ATCCAAGATTATCAAACCCA+AGG | - | chr2_2:5059852-5059871 | None:intergenic | 35.0% | |
| CCTAAGTCATGATGAAGAAA+AGG | - | chr2_2:5059879-5059898 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTCATCATGACTT+AGG | + | chr2_2:5059876-5059895 | Msa0232810:intron | 35.0% |
| TTTCTTCATCATGACTTAGG+AGG | + | chr2_2:5059879-5059898 | Msa0232810:intron | 35.0% | |
| !! | TGAGACTGGTTTAAGATCTA+TGG | - | chr2_2:5060039-5060058 | None:intergenic | 35.0% |
| ! | ATGACATGAAAGTATGAGCT+AGG | - | chr2_2:5060067-5060086 | None:intergenic | 35.0% |
| ATTTGTTTGGTCACATCACT+TGG | + | chr2_2:5060233-5060252 | Msa0232810:intron | 35.0% | |
| TGGAGCTAGCAATGATATTA+AGG | + | chr2_2:5060260-5060279 | Msa0232810:CDS | 35.0% | |
| AAGGATCTGAGTAAACTTGA+AGG | + | chr2_2:5060279-5060298 | Msa0232810:CDS | 35.0% | |
| CCGTATGCTTTCTTCAAAAT+GGG | - | chr2_2:5060531-5060550 | None:intergenic | 35.0% | |
| !! | CCCATTTTGAAGAAAGCATA+CGG | + | chr2_2:5060528-5060547 | Msa0232810:CDS | 35.0% |
| TCCGTATGCTTTCTTCAAAA+TGG | - | chr2_2:5060532-5060551 | None:intergenic | 35.0% | |
| TGCAAAAATCTTGTACGCAA+GGG | + | chr2_2:5060678-5060697 | Msa0232810:CDS | 35.0% | |
| !!! | AGGGTTTTGTTCAGGTATTT+TGG | - | chr2_2:5060798-5060817 | None:intergenic | 35.0% |
| !!! | GATGGTGTTGTTATCTTTTC+AGG | + | chr2_2:5060843-5060862 | Msa0232810:CDS | 35.0% |
| !!! | TCATATTTTTTTGGCTGGCT+AGG | + | chr2_2:5061054-5061073 | Msa0232810:intron | 35.0% |
| !!! | CATATTTTTTTGGCTGGCTA+GGG | + | chr2_2:5061055-5061074 | Msa0232810:intron | 35.0% |
| ATTTCATGCATAGGTTATCC+TGG | + | chr2_2:5061239-5061258 | Msa0232810:intron | 35.0% | |
| ! | AAGATAGGAAAGTACAGAGA+GGG | + | chr2_2:5061428-5061447 | Msa0232810:intron | 35.0% |
| ATGAATCCCACTAAATCAGT+GGG | + | chr2_2:5061563-5061582 | Msa0232810:intron | 35.0% | |
| ! | TTGAGTGTTAGAGAGTATGT+CGG | + | chr2_2:5061654-5061673 | Msa0232810:intron | 35.0% |
| TCTTTATGAAGGCCAAATTG+CGG | + | chr2_2:5061833-5061852 | Msa0232810:intron | 35.0% | |
| TGCTGGAAAGAAATTTGAAC+AGG | + | chr2_2:5061912-5061931 | Msa0232810:CDS | 35.0% | |
| AGAAACCATACTGATGATTC+TGG | + | chr2_2:5062036-5062055 | Msa0232810:three_prime_UTR | 35.0% | |
| ! | TGTATGGAACTTTTACCCTT+CGG | - | chr2_2:5062074-5062093 | None:intergenic | 35.0% |
| TCCGATCTTGACAAGATATT+AGG | + | chr2_2:5062127-5062146 | Msa0232810:three_prime_UTR | 35.0% | |
| !! | TCTATTTAGCGGACTATGGA+GGG | + | chr2_2:5058643-5058662 | Msa0232810:intron | 40.0% |
| !!! | GTCGTCGCTTTTATTGATCT+TGG | + | chr2_2:5058676-5058695 | Msa0232810:intron | 40.0% |
| TCAGTAGATTCAAGATCGGT+CGG | - | chr2_2:5058771-5058790 | None:intergenic | 40.0% | |
| ! | ACTGATCTTGAATTGATGGC+TGG | + | chr2_2:5058859-5058878 | Msa0232810:intron | 40.0% |
| ! | CTGATCTTGAATTGATGGCT+GGG | + | chr2_2:5058860-5058879 | Msa0232810:intron | 40.0% |
| AAATTTACCGAATCTGCGTC+TGG | + | chr2_2:5058915-5058934 | Msa0232810:intron | 40.0% | |
| CTACAAGTCAAAGTAACGAG+TGG | + | chr2_2:5059186-5059205 | Msa0232810:intron | 40.0% | |
| ! | TGGAGGAAGTATACCATTTG+TGG | + | chr2_2:5059362-5059381 | Msa0232810:CDS | 40.0% |
| AACTCTCCCCTGATATCTAT+CGG | + | chr2_2:5059408-5059427 | Msa0232810:CDS | 40.0% | |
| AACAAGCCCGATAGATATCA+GGG | - | chr2_2:5059418-5059437 | None:intergenic | 40.0% | |
| TAACAAGCCCGATAGATATC+AGG | - | chr2_2:5059419-5059438 | None:intergenic | 40.0% | |
| !! | ATCTATCGGGCTTGTTATTG+TGG | + | chr2_2:5059422-5059441 | Msa0232810:CDS | 40.0% |
| GGAGAAAGGTAAACTGCAAT+TGG | - | chr2_2:5059555-5059574 | None:intergenic | 40.0% | |
| GGTTATTGTTACAGCAGTTC+AGG | + | chr2_2:5059682-5059701 | Msa0232810:CDS | 40.0% | |
| AGTCATGATGAAGAAAAGGC+TGG | - | chr2_2:5059875-5059894 | None:intergenic | 40.0% | |
| TGTTGACAGTATGAGAATGG+CGG | - | chr2_2:5060097-5060116 | None:intergenic | 40.0% | |
| ! | CAACTCTTGTTTGTGTTTGC+AGG | + | chr2_2:5060468-5060487 | Msa0232810:intron | 40.0% |
| ! | ATGCATAAGGTTTTGCACGT+TGG | + | chr2_2:5060558-5060577 | Msa0232810:CDS | 40.0% |
| AGATACCACAGAACAAGAGT+CGG | - | chr2_2:5060586-5060605 | None:intergenic | 40.0% | |
| CCTACGTCATCTAATTCGTA+TGG | - | chr2_2:5060651-5060670 | None:intergenic | 40.0% | |
| CCATACGAATTAGATGACGT+AGG | + | chr2_2:5060648-5060667 | Msa0232810:CDS | 40.0% | |
| GTGCAAAAATCTTGTACGCA+AGG | + | chr2_2:5060677-5060696 | Msa0232810:CDS | 40.0% | |
| CAAGAGGAAATGACTTTGCA+CGG | - | chr2_2:5060743-5060762 | None:intergenic | 40.0% | |
| ACTTACTGGACGACCAAATT+TGG | - | chr2_2:5061294-5061313 | None:intergenic | 40.0% | |
| ! | GAAGATAGGAAAGTACAGAG+AGG | + | chr2_2:5061427-5061446 | Msa0232810:intron | 40.0% |
| !! | CAAGAAAAGAGTGTTCGAGA+GGG | - | chr2_2:5061529-5061548 | None:intergenic | 40.0% |
| !! | TCAAGAAAAGAGTGTTCGAG+AGG | - | chr2_2:5061530-5061549 | None:intergenic | 40.0% |
| CATGAATCCCACTAAATCAG+TGG | + | chr2_2:5061562-5061581 | Msa0232810:intron | 40.0% | |
| CTTAATCCAGCCAGGTAATA+GGG | - | chr2_2:5061765-5061784 | None:intergenic | 40.0% | |
| TTATTGACCTTAATCCAGCC+AGG | - | chr2_2:5061773-5061792 | None:intergenic | 40.0% | |
| ! | GTATGGAACTTTTACCCTTC+GGG | - | chr2_2:5062073-5062092 | None:intergenic | 40.0% |
| AAACAAGTAACATGCGGCGT+CGG | + | chr2_2:5057961-5057980 | Msa0232810:five_prime_UTR | 45.0% | |
| ! | TTTTACTACACGGGGCTTGA+TGG | + | chr2_2:5058565-5058584 | Msa0232810:intron | 45.0% |
| GGGGCTTGATGGAATTGTTT+GGG | + | chr2_2:5058576-5058595 | Msa0232810:intron | 45.0% | |
| !! | TGCCTCTATTTAGCGGACTA+TGG | + | chr2_2:5058639-5058658 | Msa0232810:intron | 45.0% |
| CTCCATAGTCCGCTAAATAG+AGG | - | chr2_2:5058644-5058663 | None:intergenic | 45.0% | |
| !! | CTCTATTTAGCGGACTATGG+AGG | + | chr2_2:5058642-5058661 | Msa0232810:intron | 45.0% |
| TAAAGGCTAGGCAACAACTG+TGG | - | chr2_2:5058943-5058962 | None:intergenic | 45.0% | |
| TGCACAGCTCATAGCACAAT+CGG | - | chr2_2:5059026-5059045 | None:intergenic | 45.0% | |
| !! | TTTGTGGCATTGGTTGGCAT+TGG | + | chr2_2:5059100-5059119 | Msa0232810:intron | 45.0% |
| TCATTGCCGTTAACATGTCG+AGG | + | chr2_2:5059307-5059326 | Msa0232810:exon | 45.0% | |
| ACTCTCCCCTGATATCTATC+GGG | + | chr2_2:5059409-5059428 | Msa0232810:CDS | 45.0% | |
| ACAAGCCCGATAGATATCAG+GGG | - | chr2_2:5059417-5059436 | None:intergenic | 45.0% | |
| !! | CTGTGGGTTGATAGCAAACA+GGG | - | chr2_2:5059609-5059628 | None:intergenic | 45.0% |
| !! | TCTGTGGGTTGATAGCAAAC+AGG | - | chr2_2:5059610-5059629 | None:intergenic | 45.0% |
| TGAGCTAGGTTCTATGAGAC+TGG | - | chr2_2:5060053-5060072 | None:intergenic | 45.0% | |
| ATACGGAGACAGCATGCATA+AGG | + | chr2_2:5060545-5060564 | Msa0232810:CDS | 45.0% | |
| ATACCACAGAACAAGAGTCG+GGG | - | chr2_2:5060584-5060603 | None:intergenic | 45.0% | |
| GATACCACAGAACAAGAGTC+GGG | - | chr2_2:5060585-5060604 | None:intergenic | 45.0% | |
| GTTAGTAGAAGACGATACCG+AGG | + | chr2_2:5060611-5060630 | Msa0232810:CDS | 45.0% | |
| GGAAATGACTTTGCACGGTA+AGG | - | chr2_2:5060738-5060757 | None:intergenic | 45.0% | |
| TGTCATTGTGTCCGATGCAT+TGG | + | chr2_2:5060761-5060780 | Msa0232810:CDS | 45.0% | |
| GCTAGGGCTATTATTCACCT+AGG | + | chr2_2:5061071-5061090 | Msa0232810:intron | 45.0% | |
| ! | TAATCTTGGTGACAGAGCCT+AGG | - | chr2_2:5061091-5061110 | None:intergenic | 45.0% |
| ACTGTTGTGTCCCTATTACC+TGG | + | chr2_2:5061752-5061771 | Msa0232810:intron | 45.0% | |
| CCTTAATCCAGCCAGGTAAT+AGG | - | chr2_2:5061766-5061785 | None:intergenic | 45.0% | |
| CCTATTACCTGGCTGGATTA+AGG | + | chr2_2:5061763-5061782 | Msa0232810:intron | 45.0% | |
| AGGTGAAAAACTTGGCAAGC+TGG | - | chr2_2:5061961-5061980 | None:intergenic | 45.0% | |
| AGGTGCCAGAATCATCAGTA+TGG | - | chr2_2:5062044-5062063 | None:intergenic | 45.0% | |
| CGGGGCTTGATGGAATTGTT+TGG | + | chr2_2:5058575-5058594 | Msa0232810:intron | 50.0% | |
| !! | TAGCGGACTATGGAGGGATT+TGG | + | chr2_2:5058649-5058668 | Msa0232810:intron | 50.0% |
| TGTGGTTCCAGACGCAGATT+CGG | - | chr2_2:5058925-5058944 | None:intergenic | 50.0% | |
| TTGCCGTTAACATGTCGAGG+AGG | + | chr2_2:5059310-5059329 | Msa0232810:exon | 50.0% | |
| TGGCCTCCTCGACATGTTAA+CGG | - | chr2_2:5059316-5059335 | None:intergenic | 50.0% | |
| AACCGACGTGAAGGATTCAC+TGG | - | chr2_2:5059336-5059355 | None:intergenic | 50.0% | |
| ! | GTGAATCCTTCACGTCGGTT+AGG | + | chr2_2:5059336-5059355 | Msa0232810:CDS | 50.0% |
| GACTGGATAGAGGCCACAAA+TGG | - | chr2_2:5059378-5059397 | None:intergenic | 50.0% | |
| CAGGGTGCGATTCTTCTGAT+TGG | + | chr2_2:5059661-5059680 | Msa0232810:intron | 50.0% | |
| GTTTGGTCACATCACTTGGC+AGG | + | chr2_2:5060237-5060256 | Msa0232810:intron | 50.0% | |
| TAGAAGACGATACCGAGGCT+TGG | + | chr2_2:5060616-5060635 | Msa0232810:CDS | 50.0% | |
| AGAAGACGATACCGAGGCTT+GGG | + | chr2_2:5060617-5060636 | Msa0232810:CDS | 50.0% | |
| GACTTTGCACGGTAAGGTAG+AGG | - | chr2_2:5060732-5060751 | None:intergenic | 50.0% | |
| GCATCGGACACAATGACAAG+AGG | - | chr2_2:5060759-5060778 | None:intergenic | 50.0% | |
| !!! | ACTCTGGCAGGGTTTTGTTC+AGG | - | chr2_2:5060806-5060825 | None:intergenic | 50.0% |
| GAACAAAACCCTGCCAGAGT+TGG | + | chr2_2:5060806-5060825 | Msa0232810:CDS | 50.0% | |
| GGCGGAGAAGTAGCCAAATT+TGG | + | chr2_2:5061278-5061297 | Msa0232810:CDS | 50.0% | |
| TTGTGTCCCTATTACCTGGC+TGG | + | chr2_2:5061756-5061775 | Msa0232810:intron | 50.0% | |
| CCAAGATGAGCTCCGCAATT+TGG | - | chr2_2:5061848-5061867 | None:intergenic | 50.0% | |
| CCAAATTGCGGAGCTCATCT+TGG | + | chr2_2:5061845-5061864 | Msa0232810:CDS | 50.0% | |
| AATTGCGGAGCTCATCTTGG+TGG | + | chr2_2:5061848-5061867 | Msa0232810:CDS | 50.0% | |
| ! | GGAGCTCATCTTGGTGGATA+AGG | + | chr2_2:5061854-5061873 | Msa0232810:CDS | 50.0% |
| TGAACAGGCTTCAGCCAAGA+AGG | + | chr2_2:5061927-5061946 | Msa0232810:CDS | 50.0% | |
| ! | TTTTACCCTTCGGGTGCTCA+AGG | - | chr2_2:5062064-5062083 | None:intergenic | 50.0% |
| GGCCAGTGAATCCTTCACGT+CGG | + | chr2_2:5059331-5059350 | Msa0232810:CDS | 55.0% | |
| CCATCACCTAACCGACGTGA+AGG | - | chr2_2:5059345-5059364 | None:intergenic | 55.0% | |
| ! | CCTTCACGTCGGTTAGGTGA+TGG | + | chr2_2:5059342-5059361 | Msa0232810:CDS | 55.0% |
| ! | TCACGTCGGTTAGGTGATGG+AGG | + | chr2_2:5059345-5059364 | Msa0232810:CDS | 55.0% |
| TGGTCACATCACTTGGCAGG+TGG | + | chr2_2:5060240-5060259 | Msa0232810:intron | 55.0% | |
| GAAGACGATACCGAGGCTTG+GGG | + | chr2_2:5060618-5060637 | Msa0232810:CDS | 55.0% | |
| TGGTTCGATTCCCCAAGCCT+CGG | - | chr2_2:5060631-5060650 | None:intergenic | 55.0% | |
| !! | ACGCAAGGGCATTGTACGTG+TGG | + | chr2_2:5060692-5060711 | Msa0232810:CDS | 55.0% |
| !! | AAACCCTGCCAGAGTTGGTG+AGG | + | chr2_2:5060811-5060830 | Msa0232810:CDS | 55.0% |
| !! | AACCCTGCCAGAGTTGGTGA+GGG | + | chr2_2:5060812-5060831 | Msa0232810:CDS | 55.0% |
| TACCCTCACCAACTCTGGCA+GGG | - | chr2_2:5060817-5060836 | None:intergenic | 55.0% | |
| ATACCCTCACCAACTCTGGC+AGG | - | chr2_2:5060818-5060837 | None:intergenic | 55.0% | |
| GCAGATACCCTCACCAACTC+TGG | - | chr2_2:5060822-5060841 | None:intergenic | 55.0% | |
| !! | TTGGTGAGGGTATCTGCCGA+TGG | + | chr2_2:5060825-5060844 | Msa0232810:CDS | 55.0% |
| AGCTGGTGCGTATGCCTTCT+TGG | - | chr2_2:5061944-5061963 | None:intergenic | 55.0% | |
| TGGCCCCGACTCTTGTTCTG+TGG | + | chr2_2:5060578-5060597 | Msa0232810:CDS | 60.0% | |
| !! | CCTCTAGCTCTCTGCTGACC+AGG | - | chr2_2:5061260-5061279 | None:intergenic | 60.0% |
| CCTGGTCAGCAGAGAGCTAG+AGG | + | chr2_2:5061257-5061276 | Msa0232810:CDS | 60.0% | |
| GGTCAGCAGAGAGCTAGAGG+CGG | + | chr2_2:5061260-5061279 | Msa0232810:CDS | 60.0% | |
| TGGCACCTTGAGCACCCGAA+GGG | + | chr2_2:5062056-5062075 | Msa0232810:three_prime_UTR | 60.0% | |
| CTGGCACCTTGAGCACCCGA+AGG | + | chr2_2:5062055-5062074 | Msa0232810:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 5057961 | 5062343 | 5057961 | ID=Msa0232810;Name=Msa0232810 |
| chr2_2 | mRNA | 5057961 | 5062343 | 5057961 | ID=Msa0232810-mRNA-1;Parent=Msa0232810;Name=Msa0232810-mRNA-1;_AED=0.02;_eAED=0.02;_QI=338|1|1|1|0.83|0.71|7|347|262 |
| chr2_2 | exon | 5057961 | 5058270 | 5057961 | ID=Msa0232810-mRNA-1:exon:2196;Parent=Msa0232810-mRNA-1 |
| chr2_2 | exon | 5059293 | 5059443 | 5059293 | ID=Msa0232810-mRNA-1:exon:2197;Parent=Msa0232810-mRNA-1 |
| chr2_2 | exon | 5059664 | 5059703 | 5059664 | ID=Msa0232810-mRNA-1:exon:2198;Parent=Msa0232810-mRNA-1 |
| chr2_2 | exon | 5060259 | 5060300 | 5060259 | ID=Msa0232810-mRNA-1:exon:2199;Parent=Msa0232810-mRNA-1 |
| chr2_2 | exon | 5060490 | 5060864 | 5060490 | ID=Msa0232810-mRNA-1:exon:2200;Parent=Msa0232810-mRNA-1 |
| chr2_2 | exon | 5061252 | 5061307 | 5061252 | ID=Msa0232810-mRNA-1:exon:2201;Parent=Msa0232810-mRNA-1 |
| chr2_2 | exon | 5061844 | 5062343 | 5061844 | ID=Msa0232810-mRNA-1:exon:2202;Parent=Msa0232810-mRNA-1 |
| chr2_2 | five_prime_UTR | 5057961 | 5058270 | 5057961 | ID=Msa0232810-mRNA-1:five_prime_utr;Parent=Msa0232810-mRNA-1 |
| chr2_2 | five_prime_UTR | 5059293 | 5059320 | 5059293 | ID=Msa0232810-mRNA-1:five_prime_utr;Parent=Msa0232810-mRNA-1 |
| chr2_2 | CDS | 5059321 | 5059443 | 5059321 | ID=Msa0232810-mRNA-1:cds;Parent=Msa0232810-mRNA-1 |
| chr2_2 | CDS | 5059664 | 5059703 | 5059664 | ID=Msa0232810-mRNA-1:cds;Parent=Msa0232810-mRNA-1 |
| chr2_2 | CDS | 5060259 | 5060300 | 5060259 | ID=Msa0232810-mRNA-1:cds;Parent=Msa0232810-mRNA-1 |
| chr2_2 | CDS | 5060490 | 5060864 | 5060490 | ID=Msa0232810-mRNA-1:cds;Parent=Msa0232810-mRNA-1 |
| chr2_2 | CDS | 5061252 | 5061307 | 5061252 | ID=Msa0232810-mRNA-1:cds;Parent=Msa0232810-mRNA-1 |
| chr2_2 | CDS | 5061844 | 5061996 | 5061844 | ID=Msa0232810-mRNA-1:cds;Parent=Msa0232810-mRNA-1 |
| chr2_2 | three_prime_UTR | 5061997 | 5062343 | 5061997 | ID=Msa0232810-mRNA-1:three_prime_utr;Parent=Msa0232810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
