AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0195020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195020 MtrunA17_Chr2g0286501 99.770 434 1 0 1 434 970 1403 0.0 877
Msa0195020 MtrunA17_Chr5g0400111 89.862 434 28 1 1 434 181 598 0.0 753
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195020 AT5G18700.1 65.611 442 140 7 1 432 927 1366 0.0 560
Msa0195020 AT1G33940.2 62.617 214 69 6 230 434 286 497 3.79e-76 246
Msa0195020 AT1G33940.2 66.667 63 21 0 1 63 224 286 2.47e-17 84.3
Msa0195020 AT1G33940.1 62.617 214 69 6 230 434 286 497 3.79e-76 246
Msa0195020 AT1G33940.1 66.667 63 21 0 1 63 224 286 2.47e-17 84.3

Find 326 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTATGCTTCTGATTTC+TGG 0.067580 2_1:+11653356 Msa0195020:five_prime_UTR
CCTATAAAGGTTAAACATTT+TGG 0.114466 2_1:+11657885 Msa0195020:three_prime_UTR
ACCAAGGAAATTAATGAATT+TGG 0.117530 2_1:-11655140 None:intergenic
TTTCAATTGGGAAAGTAATT+TGG 0.131887 2_1:-11657162 None:intergenic
CCAAAATGTTTAACCTTTAT+AGG 0.153662 2_1:-11657885 None:intergenic
AACAAGTGAATGTTGGATTT+TGG 0.170334 2_1:-11655871 None:intergenic
TTTATGAGAATGAGCATTAT+TGG 0.184315 2_1:-11654606 None:intergenic
ACGACATCTCCCAGGTTATT+TGG 0.191363 2_1:+11654322 Msa0195020:five_prime_UTR
GTTCATTGACGGATGGTCTT+AGG 0.203998 2_1:+11654745 Msa0195020:five_prime_UTR
GTAGGATATTTGACGGTTTC+AGG 0.211705 2_1:-11652944 None:intergenic
TGCATTTGAATTTGAATAAT+TGG 0.215788 2_1:+11657785 Msa0195020:exon
AATAAAACTTGAGAACATTT+TGG 0.216207 2_1:-11652071 None:intergenic
TTAGCTAATTCTGGAATTCT+AGG 0.224498 2_1:+11654723 Msa0195020:five_prime_UTR
GATGACAGTTTAGCTAATTC+TGG 0.230373 2_1:+11654714 Msa0195020:five_prime_UTR
TGATATCTCTTTCAACCTTC+TGG 0.233851 2_1:-11653113 None:intergenic
AATATCCTACTAGATGAAAA+TGG 0.236681 2_1:+11652957 Msa0195020:five_prime_UTR
TTAGGCATCTTGACAAATTC+AGG 0.237444 2_1:-11654444 None:intergenic
AAATTCGAAGAAGGGTTATT+TGG 0.243107 2_1:-11656692 None:intergenic
TTCTTATGCTTCTGATTTCT+GGG 0.244503 2_1:+11653357 Msa0195020:five_prime_UTR
ACTTGCGGAGGCACCGTTTC+AGG 0.248823 2_1:+11655984 Msa0195020:CDS
CAGAGAATGCTTCATGCTTT+AGG 0.261917 2_1:+11657599 Msa0195020:CDS
ATCCCTAGAGTCTGCACTTT+GGG 0.271982 2_1:-11654835 None:intergenic
TGTTATGATTGTCCTTATTC+TGG 0.272882 2_1:+11657816 Msa0195020:three_prime_UTR
GGCTGCCAATCCAGCAGTTT+TGG 0.273507 2_1:-11657738 None:intergenic
GTCTGAGTTCTTTGTCCATT+TGG 0.277031 2_1:-11653778 None:intergenic
CAAAATGTTTAACCTTTATA+GGG 0.277478 2_1:-11657884 None:intergenic
TAGTTTGACAGTTCTCTATA+AGG 0.288433 2_1:+11656785 Msa0195020:CDS
AGAATCTGTCCCAAGTCTTT+TGG 0.291743 2_1:+11655552 Msa0195020:five_prime_UTR
AATCTTTGCTCTTCTTCAAT+TGG 0.292075 2_1:-11656882 None:intergenic
TGGAGTCGGGTCTGAAATTA+TGG 0.302371 2_1:-11653458 None:intergenic
CCATTTGGTGTTGCTCTTGT+TGG 0.304990 2_1:-11653763 None:intergenic
TTCTGTGCCCAATGAGAAAA+TGG 0.307030 2_1:+11654062 Msa0195020:five_prime_UTR
TGGCCCATTGGTCAAGATAT+TGG 0.308878 2_1:-11654586 None:intergenic
TGCCTTTACTCCAGGATTCT+AGG 0.316270 2_1:-11657559 None:intergenic
GGATTACTGGATATAATAAC+TGG 0.320068 2_1:+11655781 Msa0195020:five_prime_UTR
CTATAGAGCGGCAGGGAAAC+TGG 0.322818 2_1:+11655301 Msa0195020:five_prime_UTR
AAATTTCACCAACCAGAATA+AGG 0.325667 2_1:-11657828 None:intergenic
TTTCCCAATTGAAAGTTGTT+AGG 0.328070 2_1:+11657171 Msa0195020:CDS
AGCTTTGTGGACATGCCTTT+TGG 0.336181 2_1:+11653569 Msa0195020:five_prime_UTR
ATCCACTATTCCTGGATTAC+TGG 0.337082 2_1:+11655768 Msa0195020:five_prime_UTR
CACGGTAACCTTGGGGAGAT+TGG 0.337957 2_1:-11657534 None:intergenic
TTGATGCAGCTCTGTGATTT+CGG 0.348127 2_1:+11653085 Msa0195020:intron
GGGATCTACTTTCTATATTA+CGG 0.349970 2_1:+11652472 Msa0195020:five_prime_UTR
GTTCAACTTGCTTCGCTGAT+TGG 0.350219 2_1:+11654663 Msa0195020:five_prime_UTR
ACAACAGAGCCAACTCTCTT+AGG 0.350541 2_1:+11657317 Msa0195020:CDS
TCCAAATTCATTAATTTCCT+TGG 0.351752 2_1:+11655139 Msa0195020:five_prime_UTR
AGTAATTTGGACTCCATCTC+AGG 0.353288 2_1:-11657149 None:intergenic
ATGAAACGTCTGCTCACTTA+TGG 0.356759 2_1:+11652424 Msa0195020:five_prime_UTR
AACATTGTGAAATTGTCTTC+AGG 0.357978 2_1:-11657052 None:intergenic
TCCTCCTAACAACTTTCAAT+TGG 0.360175 2_1:-11657175 None:intergenic
TGCTCTTGTTGGTGTCTCAA+TGG 0.364206 2_1:-11653752 None:intergenic
ATTGTGGCATCCACTATTCC+TGG 0.366016 2_1:+11655760 Msa0195020:five_prime_UTR
TGTTAAGCTGTGTCTTGCTT+TGG 0.367199 2_1:+11657118 Msa0195020:CDS
TTCTGTGCAAATATAGGAAT+AGG 0.368647 2_1:-11656975 None:intergenic
TGCTCACTTATGGTTGGTAT+TGG 0.371077 2_1:+11652434 Msa0195020:five_prime_UTR
AGTGCCTCCAGTTGCTCTTT+AGG 0.371521 2_1:-11654462 None:intergenic
TAATAGTAAATTCCCTATAA+AGG 0.376883 2_1:+11657872 Msa0195020:three_prime_UTR
CCACCACTGAAAGTAACTTA+TGG 0.381301 2_1:-11655678 None:intergenic
AGAAGCTTCTGTGCAAATAT+AGG 0.383649 2_1:-11656981 None:intergenic
GCTTCTGATTTCTGGGCTCT+AGG 0.385676 2_1:+11653364 Msa0195020:five_prime_UTR
CCAACAAGAGCAACACCAAA+TGG 0.385837 2_1:+11653763 Msa0195020:five_prime_UTR
AGGTAGCCGCTGCAACTCTA+AGG 0.386631 2_1:-11657759 None:intergenic
TTCAGGTATTTACATTCAAA+TGG 0.387085 2_1:+11652906 Msa0195020:intron
GCCTTCCTCCCATCATTTGC+TGG 0.395992 2_1:-11655810 None:intergenic
AGATGGCTATAATTCGGTTA+TGG 0.397470 2_1:-11654485 None:intergenic
CGAATTATAGCCATCTTGAA+TGG 0.406631 2_1:+11654492 Msa0195020:five_prime_UTR
TTTAACATCGGCATCTTTCT+CGG 0.407477 2_1:-11653953 None:intergenic
TCTAGGATCACGGTAACCTT+GGG 0.408943 2_1:-11657542 None:intergenic
AGTTTGACAGTTCTCTATAA+GGG 0.410939 2_1:+11656786 Msa0195020:CDS
TTCATTGACGGATGGTCTTA+GGG 0.411823 2_1:+11654746 Msa0195020:five_prime_UTR
CATTCAAGATGGCTATAATT+CGG 0.417750 2_1:-11654491 None:intergenic
GCGGTTCTATTGTCCTTTGA+TGG 0.418267 2_1:-11654876 None:intergenic
GAGATAAGTCTTCTCATAAC+AGG 0.421076 2_1:+11653686 Msa0195020:five_prime_UTR
TGCCACTGTATTCTTTCAGC+TGG 0.422053 2_1:-11653544 None:intergenic
GTCTTCAGGTGTAGAATGTC+TGG 0.423462 2_1:-11657038 None:intergenic
TTTGCCAACTGCCGTAGAAC+AGG 0.423730 2_1:-11655952 None:intergenic
CAAGATGCCTAAAGAGCAAC+TGG 0.424068 2_1:+11654455 Msa0195020:five_prime_UTR
GAATTTACTATTACCTGAAA+AGG 0.424267 2_1:-11657862 None:intergenic
AACGCGTAAAGCCGATGCCT+TGG 0.424361 2_1:-11654643 None:intergenic
AGTTCATTAACAGAATCTTC+AGG 0.424843 2_1:-11652773 None:intergenic
CCTCCTAACAACTTTCAATT+GGG 0.425816 2_1:-11657174 None:intergenic
TATTGGAGTATTGTGTTGGT+GGG 0.426053 2_1:+11652451 Msa0195020:five_prime_UTR
ACTTTCAGTGGTGGACAGGC+TGG 0.427134 2_1:+11655687 Msa0195020:five_prime_UTR
TGCTATATCTATAGAGCGGC+AGG 0.429168 2_1:+11655293 Msa0195020:five_prime_UTR
ACTTCAATTCTTGAAATCTC+TGG 0.429470 2_1:-11657674 None:intergenic
GATTTGCTGGAGCCAACTCT+TGG 0.429613 2_1:+11657239 Msa0195020:CDS
TTTGCAGTCAAGGAGGGGCC+TGG 0.430844 2_1:+11655231 Msa0195020:five_prime_UTR
CTTGAGTTTGTATGTGCAAA+GGG 0.430875 2_1:+11657209 Msa0195020:CDS
TTGCAGTCAAGGAGGGGCCT+GGG 0.431579 2_1:+11655232 Msa0195020:five_prime_UTR
TATCCTCTGCAAGTTGCATA+AGG 0.433564 2_1:-11655529 None:intergenic
CTTCTTAACACGGCAATGCT+TGG 0.434496 2_1:+11655476 Msa0195020:five_prime_UTR
GCATCTTTCTCGGAGCCATT+TGG 0.434917 2_1:-11653943 None:intergenic
AATTTACTATTACCTGAAAA+GGG 0.437401 2_1:-11657861 None:intergenic
CCTTGGTATCATCGGTATTG+AGG 0.438819 2_1:+11655156 Msa0195020:five_prime_UTR
AAAGGGTATGGAAGATTTGC+TGG 0.439666 2_1:+11657226 Msa0195020:CDS
GACCCGACTCCACCTCTCCC+TGG 0.440474 2_1:+11653469 Msa0195020:five_prime_UTR
GCTTACTGCAGGATCATGTT+TGG 0.443914 2_1:+11655334 Msa0195020:five_prime_UTR
AGGAAAGGCACTTGTCTTTG+TGG 0.446508 2_1:+11655606 Msa0195020:five_prime_UTR
TATAGAGAAGCTCTCATTCA+AGG 0.446636 2_1:+11655397 Msa0195020:five_prime_UTR
AGAACTCAGACAAAGGGTTC+TGG 0.448072 2_1:+11653790 Msa0195020:five_prime_UTR
TCAAGAAGATGAAGGACAAC+AGG 0.452628 2_1:-11655895 None:intergenic
ATCCCGCCTCAGATGATTCA+AGG 0.453487 2_1:+11654163 Msa0195020:five_prime_UTR
CTTAAAGATGACTTAGGATC+TGG 0.456963 2_1:+11654270 Msa0195020:five_prime_UTR
TTCTAGGATCACGGTAACCT+TGG 0.458047 2_1:-11657543 None:intergenic
ATCCAGTAATCCAGGAATAG+TGG 0.458179 2_1:-11655770 None:intergenic
ATATCCTACTAGATGAAAAT+GGG 0.459760 2_1:+11652958 Msa0195020:five_prime_UTR
GAGAGAAACAAAATGTGGTT+AGG 0.461215 2_1:+11654529 Msa0195020:five_prime_UTR
ACAATAGAACCGCGCATGGC+TGG 0.461265 2_1:+11654886 Msa0195020:five_prime_UTR
GTGAGGGGTGCCTTTACTCC+AGG 0.462010 2_1:-11657567 None:intergenic
CGTTCAGTCAGCTGTACAAA+AGG 0.462748 2_1:+11657284 Msa0195020:CDS
CAGTCAAGGAGGGGCCTGGG+TGG 0.462758 2_1:+11655235 Msa0195020:five_prime_UTR
ATTAATTTCCTTGGTATCAT+CGG 0.465973 2_1:+11655148 Msa0195020:five_prime_UTR
AACCTGGGAGATGTCGTTAG+AGG 0.468724 2_1:-11654316 None:intergenic
AGTTACTTTCAGTGGTGGAC+AGG 0.468832 2_1:+11655683 Msa0195020:five_prime_UTR
GTATTGGAGTATTGTGTTGG+TGG 0.469077 2_1:+11652450 Msa0195020:five_prime_UTR
TCCCAGGGAGAGGTGGAGTC+GGG 0.469327 2_1:-11653471 None:intergenic
ATTTGCTGGAGCCAACTCTT+GGG 0.470321 2_1:+11657240 Msa0195020:CDS
AAATTGACAAAAGGTGGACT+TGG 0.472083 2_1:-11653496 None:intergenic
TTTATTAAATTGACAAAAGG+TGG 0.472644 2_1:-11653502 None:intergenic
TTTGGCTTCTGCCCCTGAGA+TGG 0.472986 2_1:+11657136 Msa0195020:CDS
GGTGCTTGCAACGCCTCAAA+AGG 0.473310 2_1:-11654423 None:intergenic
TGTCCTTTGATGGAGATTCA+AGG 0.474392 2_1:-11654866 None:intergenic
GTCCTTTGATGGAGATTCAA+GGG 0.474875 2_1:-11654865 None:intergenic
CCACCCAAAGTGCAGACTCT+AGG 0.475323 2_1:+11654832 Msa0195020:five_prime_UTR
CAGATGGATGCCAAATAACC+TGG 0.477226 2_1:-11654332 None:intergenic
TTTAGCCAAAACTGCTGGAT+TGG 0.477623 2_1:+11657733 Msa0195020:CDS
GAAGCTTCTTGTCATGCTAC+TGG 0.478686 2_1:+11656995 Msa0195020:CDS
CATTGGTCGCGGAAGATACT+CGG 0.481193 2_1:+11651684 Msa0195020:five_prime_UTR
TCAACAAAAGCCAAAAGACT+TGG 0.482813 2_1:-11655562 None:intergenic
CAGCCAATATCTTGACCAAT+GGG 0.486652 2_1:+11654583 Msa0195020:five_prime_UTR
CACCCAAAGTGCAGACTCTA+GGG 0.487713 2_1:+11654833 Msa0195020:five_prime_UTR
ATACAGTGGCATGAGCTTTG+TGG 0.489440 2_1:+11653556 Msa0195020:five_prime_UTR
AGATGCATTTCTACATATTG+TGG 0.490840 2_1:+11655744 Msa0195020:five_prime_UTR
GAATTTATTAAATTGACAAA+AGG 0.491754 2_1:-11653505 None:intergenic
TTCCCAGGGAGAGGTGGAGT+CGG 0.492204 2_1:-11653472 None:intergenic
CCTGCTTTAGCCAAAACTGC+TGG 0.492832 2_1:+11657728 Msa0195020:CDS
AGACCAGTGGTTGCTTCTCT+AGG 0.493303 2_1:-11657506 None:intergenic
ATTTCCCGTAAGAAAATGTC+GGG 0.493736 2_1:-11656756 None:intergenic
TTCACTAGAGGGCTGACACT+TGG 0.494012 2_1:-11654237 None:intergenic
GTGAATTCTCTTCCCACAAA+AGG 0.494074 2_1:-11653421 None:intergenic
TGAAAATGATATACATCGGT+TGG 0.495038 2_1:+11654122 Msa0195020:five_prime_UTR
TGGAATTCTAGGTTCATTGA+CGG 0.495317 2_1:+11654734 Msa0195020:five_prime_UTR
TGGGGATATCCAGCAAATGA+TGG 0.495397 2_1:+11655801 Msa0195020:exon
AAGCTCCGGAGCCATGTAAG+AGG 0.495462 2_1:-11653314 None:intergenic
TTATAGAGAACTGTCAAACT+AGG 0.499585 2_1:-11656783 None:intergenic
GTTTGTATGTGCAAAGGGTA+TGG 0.499898 2_1:+11657214 Msa0195020:CDS
ACGTGGAACACCCTCTTACA+TGG 0.500533 2_1:+11653303 Msa0195020:five_prime_UTR
TCTGTGCAAATATAGGAATA+GGG 0.500689 2_1:-11656974 None:intergenic
ATAAGAGATATAACAGACTT+TGG 0.500809 2_1:+11657386 Msa0195020:CDS
AAAGGTGGACTTGGATTCCC+AGG 0.501209 2_1:-11653487 None:intergenic
TTACCGTGATCCTAGAATCC+TGG 0.501320 2_1:+11657549 Msa0195020:CDS
CCTTGAGTTTGTATGTGCAA+AGG 0.502549 2_1:+11657208 Msa0195020:CDS
CGAGTATCTTCCGCGACCAA+TGG 0.506799 2_1:-11651683 None:intergenic
TTGGTATTGGAGTATTGTGT+TGG 0.507605 2_1:+11652447 Msa0195020:five_prime_UTR
GTTATTATATCCAGTAATCC+AGG 0.507736 2_1:-11655778 None:intergenic
CAGAGGCTTAAAGATGACTT+AGG 0.509690 2_1:+11654264 Msa0195020:five_prime_UTR
GCTGACTGAACGTGCTAGAA+AGG 0.510065 2_1:-11657273 None:intergenic
ATCAAAAGTTCCTTCTTCCT+CGG 0.510246 2_1:+11653132 Msa0195020:five_prime_UTR
ATGATTGTCCTTATTCTGGT+TGG 0.510364 2_1:+11657820 Msa0195020:three_prime_UTR
CCCAATTGAAAGTTGTTAGG+AGG 0.511072 2_1:+11657174 Msa0195020:CDS
TCATCTAGTAGGATATTTGA+CGG 0.511699 2_1:-11652951 None:intergenic
TTGAAAGTTGTTAGGAGGAT+CGG 0.512081 2_1:+11657179 Msa0195020:CDS
AGAAATCAGAAGCATAAGAA+TGG 0.514379 2_1:-11653354 None:intergenic
TCTATAACAGACTGAATACT+AGG 0.514548 2_1:-11655380 None:intergenic
ACCCGACTCCACCTCTCCCT+GGG 0.514774 2_1:+11653470 Msa0195020:five_prime_UTR
TATCGACGTCCCTTGCCAAA+TGG 0.515152 2_1:+11653928 Msa0195020:five_prime_UTR
TGGCTTCGTAGATGTGGTAC+TGG 0.515401 2_1:-11651663 None:intergenic
TAGCCATAAGTTACTTTCAG+TGG 0.518096 2_1:+11655675 Msa0195020:five_prime_UTR
AGTCAAGGAGGGGCCTGGGT+GGG 0.519242 2_1:+11655236 Msa0195020:five_prime_UTR
ATCGAGAATATTTGCAGTCA+AGG 0.521249 2_1:+11655221 Msa0195020:five_prime_UTR
GTGATTTCGGATTGGCCAGA+AGG 0.521664 2_1:+11653098 Msa0195020:five_prime_UTR
TCAACAGCGCCACTCACCTC+GGG 0.522218 2_1:-11657350 None:intergenic
AATGAGCATTATTGGCCCAT+TGG 0.523789 2_1:-11654598 None:intergenic
CTTTCAGTGGTGGACAGGCT+GGG 0.524281 2_1:+11655688 Msa0195020:five_prime_UTR
ACAGACTTTGGAAGCAATGT+TGG 0.524406 2_1:+11657398 Msa0195020:CDS
ATTGGAGTATTGTGTTGGTG+GGG 0.525196 2_1:+11652452 Msa0195020:five_prime_UTR
ATCCTAGAATCCTGGAGTAA+AGG 0.525940 2_1:+11657557 Msa0195020:CDS
TAGAACCGCGCATGGCTGGC+AGG 0.526440 2_1:+11654890 Msa0195020:five_prime_UTR
GCGACTCTAAAATTCGAAGA+AGG 0.527844 2_1:-11656701 None:intergenic
TTCTCGGAGCCATTTGGCAA+GGG 0.527852 2_1:-11653937 None:intergenic
AACAGGAAACAAGTGAATGT+TGG 0.527866 2_1:-11655878 None:intergenic
AACACCCTCTTACATGGCTC+CGG 0.530839 2_1:+11653309 Msa0195020:five_prime_UTR
GCTGAGGCACAAACCTGAAA+CGG 0.531662 2_1:-11655997 None:intergenic
ATGATGGGAGGAAGGCGCCA+TGG 0.531756 2_1:+11655817 Msa0195020:CDS
CTTCATCTTCGATCAAGGTC+GGG 0.535175 2_1:-11656950 None:intergenic
GGACTTGGATTCCCAGGGAG+AGG 0.535564 2_1:-11653481 None:intergenic
GAATTATAGCCATCTTGAAT+GGG 0.536124 2_1:+11654493 Msa0195020:five_prime_UTR
TATCCCTAGAGTCTGCACTT+TGG 0.536677 2_1:-11654836 None:intergenic
ATCTACGAAGCCATTGGTCG+CGG 0.537587 2_1:+11651673 Msa0195020:five_prime_UTR
GGACAAAGAACTCAGACAAA+GGG 0.538139 2_1:+11653784 Msa0195020:five_prime_UTR
AAGCTGATTTGCTGCTCTCG+TGG 0.538407 2_1:-11655449 None:intergenic
TTCTCTGCACTGTTAAGTGA+GGG 0.538911 2_1:-11657583 None:intergenic
CTGAACTTTCAAGAAGATGA+AGG 0.539352 2_1:-11655903 None:intergenic
AGTCACATGTTGACAAATGT+TGG 0.539374 2_1:+11655500 Msa0195020:five_prime_UTR
TGATGGGAGGAAGGCGCCAT+GGG 0.540050 2_1:+11655818 Msa0195020:CDS
GCAGATATGTCAGAACGGTC+AGG 0.541167 2_1:-11654207 None:intergenic
CTAGCTTCTGCTCTTGTCAA+AGG 0.542663 2_1:+11655422 Msa0195020:five_prime_UTR
GGCAAATCTGATTAAACTTG+CGG 0.542975 2_1:+11655969 Msa0195020:CDS
TGACGGATGGTCTTAGGGAT+AGG 0.543289 2_1:+11654751 Msa0195020:five_prime_UTR
TGGACAAAGAACTCAGACAA+AGG 0.543556 2_1:+11653783 Msa0195020:five_prime_UTR
ATCAACAGCGCCACTCACCT+CGG 0.544118 2_1:-11657351 None:intergenic
AGAATATTTGCAGTCAAGGA+GGG 0.545414 2_1:+11655225 Msa0195020:five_prime_UTR
AGGGTCTTCATCTTCGATCA+AGG 0.546069 2_1:-11656955 None:intergenic
GCAGCCAATATCTTGACCAA+TGG 0.546844 2_1:+11654582 Msa0195020:five_prime_UTR
GGTTGAGGAGGAAGAGACAC+TGG 0.547029 2_1:-11653607 None:intergenic
CTTTGACAAGAGCAGAAGCT+AGG 0.548012 2_1:-11655421 None:intergenic
CTTGGATTCCCAGGGAGAGG+TGG 0.550559 2_1:-11653478 None:intergenic
TCTACTTTCTATATTACGGC+AGG 0.551375 2_1:+11652476 Msa0195020:five_prime_UTR
ATCCTCTAACGACATCTCCC+AGG 0.552285 2_1:+11654314 Msa0195020:five_prime_UTR
CTCTATAAGGGTAACAAGGA+TGG 0.553064 2_1:+11656798 Msa0195020:CDS
CAATGCTTATCAGAACGTAA+TGG 0.554187 2_1:+11653664 Msa0195020:five_prime_UTR
CAACTCACCCAATGCAGCCA+TGG 0.554568 2_1:-11654796 None:intergenic
GAGGCGGGATTAGTCACAGA+TGG 0.556213 2_1:-11654150 None:intergenic
CCTAGAGTCTGCACTTTGGG+TGG 0.556758 2_1:-11654832 None:intergenic
GTCCTTGAATCATCTGAGGC+GGG 0.557107 2_1:-11654165 None:intergenic
ATATCAGCAAACGCAGGTTG+AGG 0.558703 2_1:-11653622 None:intergenic
GTAAAGCATACCGAGGAAGA+AGG 0.561668 2_1:-11653142 None:intergenic
GGTGTCTTTCTAGAGTTGAG+TGG 0.564258 2_1:+11657419 Msa0195020:CDS
TCTGCAAGCACGGTAGGAGA+TGG 0.564526 2_1:+11655635 Msa0195020:five_prime_UTR
TGGCGACACTTCCTGTTCTA+CGG 0.564792 2_1:+11655941 Msa0195020:CDS
AGGCGGGATTAGTCACAGAT+GGG 0.565066 2_1:-11654149 None:intergenic
TCCCCTTGAATCTCCATCAA+AGG 0.565647 2_1:+11654863 Msa0195020:five_prime_UTR
TTTCTCGGAGCCATTTGGCA+AGG 0.566256 2_1:-11653938 None:intergenic
TCGATCAAGGTCGGGTAGAG+AGG 0.566734 2_1:-11656942 None:intergenic
GGGGATATCCAGCAAATGAT+GGG 0.567609 2_1:+11655802 Msa0195020:exon
CGACTCTAAAATTCGAAGAA+GGG 0.568069 2_1:-11656700 None:intergenic
GTGGCTCTCCTCTGCAAGCA+CGG 0.568996 2_1:+11655625 Msa0195020:five_prime_UTR
TCTTCATCTTCGATCAAGGT+CGG 0.571145 2_1:-11656951 None:intergenic
TGATATAGCTTCTCAGTGTG+TGG 0.571520 2_1:+11657463 Msa0195020:CDS
CAGCTTAAATCTTCTTAACA+CGG 0.574216 2_1:+11655466 Msa0195020:five_prime_UTR
ATCTCCTACCGTGCTTGCAG+AGG 0.574507 2_1:-11655633 None:intergenic
AACAGTTGAGGCGAAGCAGA+AGG 0.575624 2_1:+11653816 Msa0195020:five_prime_UTR
GGACTGTCGCCTAAGAGAGT+TGG 0.577204 2_1:-11657326 None:intergenic
ACTTCCTGTTCTACGGCAGT+TGG 0.577804 2_1:+11655948 Msa0195020:CDS
TTGAATGGGAGTACTACCAT+TGG 0.580051 2_1:+11654507 Msa0195020:five_prime_UTR
GCAGCTCTGTGATTTCGGAT+TGG 0.580237 2_1:+11653090 Msa0195020:intron
CTCTCCTCTGCAAGCACGGT+AGG 0.583826 2_1:+11655629 Msa0195020:five_prime_UTR
ACTCCAGGATTCTAGGATCA+CGG 0.587128 2_1:-11657552 None:intergenic
GATTACTGGATATAATAACT+GGG 0.587325 2_1:+11655782 Msa0195020:five_prime_UTR
CCATAAGTTACTTTCAGTGG+TGG 0.587466 2_1:+11655678 Msa0195020:five_prime_UTR
AACGTCTGCTCACTTATGGT+TGG 0.587615 2_1:+11652428 Msa0195020:five_prime_UTR
ACAGCGCCACTCACCTCGGG+AGG 0.588074 2_1:-11657347 None:intergenic
GAATATTTGCAGTCAAGGAG+GGG 0.588570 2_1:+11655226 Msa0195020:five_prime_UTR
GCTCTGCACAGCCCAAGAGT+TGG 0.588719 2_1:-11657251 None:intergenic
CAGAAAAGTTGACAAATGCT+CGG 0.589915 2_1:+11654383 Msa0195020:five_prime_UTR
CGTCCTTGAATCATCTGAGG+CGG 0.592549 2_1:-11654166 None:intergenic
TACCACATCTACGAAGCCAT+TGG 0.593078 2_1:+11651667 Msa0195020:five_prime_UTR
GGTCTGACTGAGAGATCAGA+TGG 0.593279 2_1:-11654348 None:intergenic
TATAGAGAACTGTCAAACTA+GGG 0.593299 2_1:-11656782 None:intergenic
TCCTTTGATGGAGATTCAAG+GGG 0.593472 2_1:-11654864 None:intergenic
CAACAAAAGCCAAAAGACTT+GGG 0.593992 2_1:-11655561 None:intergenic
GCTAACCTGCCAGCCATGCG+CGG 0.594979 2_1:-11654895 None:intergenic
TCCAGCAAATGATGGGAGGA+AGG 0.595519 2_1:+11655809 Msa0195020:exon
GGTAGTACTCCCATTCAAGA+TGG 0.595932 2_1:-11654502 None:intergenic
AGTTTGTGTACTCTGTATGT+TGG 0.595953 2_1:+11657944 Msa0195020:three_prime_UTR
ATACCTTATGCAACTTGCAG+AGG 0.596771 2_1:+11655526 Msa0195020:five_prime_UTR
AATTCTCTTCCCACAAAAGG+AGG 0.598969 2_1:-11653418 None:intergenic
GTAATTTGGACTCCATCTCA+GGG 0.599953 2_1:-11657148 None:intergenic
GACAGTCCTCCCGAGGTGAG+TGG 0.602331 2_1:+11657341 Msa0195020:CDS
CGATAAATCTCAGAAGAACA+AGG 0.603088 2_1:+11651846 Msa0195020:five_prime_UTR
AGATGAAAATGGGCGTACAA+AGG 0.603427 2_1:+11652968 Msa0195020:five_prime_UTR
GACCAATGGCTTCGTAGATG+TGG 0.603479 2_1:-11651669 None:intergenic
GAAAGCATGAGGCTTACTGC+AGG 0.603504 2_1:+11655323 Msa0195020:five_prime_UTR
AACGCCTCAAAAGGAAGTGA+AGG 0.603663 2_1:-11654414 None:intergenic
GAGAATATTTGCAGTCAAGG+AGG 0.605471 2_1:+11655224 Msa0195020:five_prime_UTR
AAGGACAATAGAACCGCGCA+TGG 0.607168 2_1:+11654882 Msa0195020:five_prime_UTR
GATTTCCCGTAAGAAAATGT+CGG 0.607536 2_1:-11656757 None:intergenic
GGACAGGCTGGGAAAAGAGA+AGG 0.608007 2_1:+11655699 Msa0195020:five_prime_UTR
ATTCTAGGTTCATTGACGGA+TGG 0.608026 2_1:+11654738 Msa0195020:five_prime_UTR
GCTACGTCAATCCAAGGCAT+CGG 0.608116 2_1:+11654632 Msa0195020:five_prime_UTR
ATTTACTATTACCTGAAAAG+GGG 0.609666 2_1:-11657860 None:intergenic
GACGCACTTGACGAAAATGA+TGG 0.609930 2_1:+11654024 Msa0195020:five_prime_UTR
TGGCAGCCTTAGAGTTGCAG+CGG 0.610173 2_1:+11657753 Msa0195020:CDS
ATTTGAATTTGAATAATTGG+TGG 0.610193 2_1:+11657788 Msa0195020:exon
TCAGCAAACGCAGGTTGAGG+AGG 0.612179 2_1:-11653619 None:intergenic
GGGTTCTGGCAGAACAGTTG+AGG 0.613400 2_1:+11653804 Msa0195020:five_prime_UTR
GCTCCTAGAGAAGCAACCAC+TGG 0.614129 2_1:+11657503 Msa0195020:CDS
AGCTCCGGAGCCATGTAAGA+GGG 0.614417 2_1:-11653313 None:intergenic
AAAGTTGCTACGTCAATCCA+AGG 0.616185 2_1:+11654626 Msa0195020:five_prime_UTR
ATTCTCTGCACTGTTAAGTG+AGG 0.617914 2_1:-11657584 None:intergenic
GTATCATCGGTATTGAGGAA+AGG 0.619956 2_1:+11655161 Msa0195020:five_prime_UTR
ATATCTCTTATGCATTGCTG+CGG 0.621533 2_1:-11657374 None:intergenic
CCTCAATACCGATGATACCA+AGG 0.623609 2_1:-11655156 None:intergenic
ATCTAAACACTGCCGCACAA+AGG 0.626875 2_1:-11655725 None:intergenic
AGAAAATGTCGGGATTTGCA+AGG 0.627453 2_1:-11656746 None:intergenic
GTACTGTATGAATGTTACAC+TGG 0.631685 2_1:+11653391 Msa0195020:five_prime_UTR
CTTAGGCGACAGTCCTCCCG+AGG 0.634226 2_1:+11657334 Msa0195020:CDS
AGAAGCTATATCAGCAACAC+TGG 0.635437 2_1:-11657453 None:intergenic
GAAGTACAGTGAAGCCTGAG+TGG 0.635783 2_1:-11657914 None:intergenic
ACTCGTCAAACGTCCCACCC+AGG 0.636174 2_1:-11655249 None:intergenic
GAGATTGGTTAGTAGACCAG+TGG 0.636585 2_1:-11657519 None:intergenic
TCTCTGCACTGTTAAGTGAG+GGG 0.636728 2_1:-11657582 None:intergenic
GATGTGGTACTGGTTCATGA+TGG 0.637766 2_1:-11651653 None:intergenic
AGTTCTCTATAAGGGTAACA+AGG 0.638052 2_1:+11656794 Msa0195020:CDS
CAGGGAAACTGGAAAGCATG+AGG 0.640711 2_1:+11655312 Msa0195020:five_prime_UTR
CCTTTGCACATACAAACTCA+AGG 0.646348 2_1:-11657208 None:intergenic
TAGTTGCCTCAAGCAAAACG+TGG 0.647581 2_1:+11653286 Msa0195020:intron
CTAGGATCACGGTAACCTTG+GGG 0.651201 2_1:-11657541 None:intergenic
AAGAGAAGGATGCCTTTGTG+CGG 0.655460 2_1:+11655713 Msa0195020:five_prime_UTR
AGATGGATGCCAAATAACCT+GGG 0.656619 2_1:-11654331 None:intergenic
ACACTGAAAATGATATACAT+CGG 0.660056 2_1:+11654118 Msa0195020:five_prime_UTR
CATACTGCAAAGCTCTGACA+AGG 0.660513 2_1:-11652805 None:intergenic
TAAAATTGAGAACACTGACA+TGG 0.665566 2_1:+11653972 Msa0195020:five_prime_UTR
AAACGTCCTTGAATCATCTG+AGG 0.667624 2_1:-11654169 None:intergenic
CATTGGAGAGAAACAAAATG+TGG 0.670663 2_1:+11654524 Msa0195020:five_prime_UTR
CATTAGTGCTCAACATCTCG+AGG 0.671183 2_1:-11654554 None:intergenic
AAATCTGATTAAACTTGCGG+AGG 0.672086 2_1:+11655972 Msa0195020:CDS
ATAACAGACTGAATACTAGG+AGG 0.678103 2_1:-11655377 None:intergenic
AAATAGCAGATATGTCAGAA+CGG 0.679005 2_1:-11654212 None:intergenic
TACTGTATGAATGTTACACT+GGG 0.679202 2_1:+11653392 Msa0195020:five_prime_UTR
TCAGTCATATCAGCAAACGC+AGG 0.682322 2_1:-11653628 None:intergenic
AATTTGCAGACTGTTTACAA+AGG 0.683062 2_1:+11651781 Msa0195020:intron
GCTATATCTATAGAGCGGCA+GGG 0.683187 2_1:+11655294 Msa0195020:five_prime_UTR
TTATGGCTACAAAAGAACTG+TGG 0.683341 2_1:-11655661 None:intergenic
AGAGAACTGTCAAACTAGGG+AGG 0.683975 2_1:-11656779 None:intergenic
TCTACTAACCAATCTCCCCA+AGG 0.685022 2_1:+11657526 Msa0195020:CDS
GATATCCAGCAAATGATGGG+AGG 0.688766 2_1:+11655805 Msa0195020:exon
GGCGGGATTAGTCACAGATG+GGG 0.695979 2_1:-11654148 None:intergenic
AAGGTGGACTTGGATTCCCA+GGG 0.701495 2_1:-11653486 None:intergenic
TCTCTGCTATATCTATAGAG+CGG 0.704718 2_1:+11655289 Msa0195020:five_prime_UTR
ATTACTGGATATAATAACTG+GGG 0.708379 2_1:+11655783 Msa0195020:five_prime_UTR
TAAGCGAAGAGATATGCCCA+TGG 0.716032 2_1:-11655834 None:intergenic
ATTCAAATTCAAATGCAGCG+AGG 0.718659 2_1:-11657779 None:intergenic
GATGCCTAAAGAGCAACTGG+AGG 0.728408 2_1:+11654458 Msa0195020:five_prime_UTR
ATCCAGCTGAAAGAATACAG+TGG 0.749847 2_1:+11653542 Msa0195020:five_prime_UTR
TAATTTGGACTCCATCTCAG+GGG 0.750251 2_1:-11657147 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAACAAAAAGAAA+AGG - chr2_1:11651936-11651955 None:intergenic 10.0%
!! TTAATTAATTATGCTAATTT+CGG + chr2_1:11651946-11651965 Msa0195020:intron 10.0%
!! ATATAAAAAATTCACAATTT+AGG + chr2_1:11654995-11655014 Msa0195020:intron 10.0%
!!! CTATTTTCTAAAAATAATAA+AGG + chr2_1:11656256-11656275 Msa0195020:intron 10.0%
!!! GTAAAATAATTATCAAATTT+TGG - chr2_1:11656517-11656536 None:intergenic 10.0%
!! AGAAATATTCTTTAACAATT+AGG + chr2_1:11652101-11652120 Msa0195020:intron 15.0%
!! GAAATATTCTTTAACAATTA+GGG + chr2_1:11652102-11652121 Msa0195020:intron 15.0%
!!! AATAGAATTTCTTCAATTTT+TGG - chr2_1:11652133-11652152 None:intergenic 15.0%
!! AAAATAATCTTACTAAAATG+AGG + chr2_1:11652156-11652175 Msa0195020:intron 15.0%
!!! TTAACATATTATTTGTTTTC+AGG - chr2_1:11653241-11653260 None:intergenic 15.0%
!! GAATTTATTAAATTGACAAA+AGG - chr2_1:11653508-11653527 None:intergenic 15.0%
!!! ATTCAAACCTTTTTTAATAA+TGG - chr2_1:11653848-11653867 None:intergenic 15.0%
!!! GTGGTATTTAATTTAAAATA+GGG + chr2_1:11656342-11656361 Msa0195020:intron 15.0%
!!! TGGTATTTAATTTAAAATAG+GGG + chr2_1:11656343-11656362 Msa0195020:intron 15.0%
!!! AATAAAACTTGAGAACATTT+TGG - chr2_1:11652074-11652093 None:intergenic 20.0%
!! ATATTAAAGACGAATCATTT+GGG + chr2_1:11652233-11652252 Msa0195020:intron 20.0%
!! AAATTGTAGCATCTTAATTT+GGG + chr2_1:11652672-11652691 Msa0195020:intron 20.0%
!! TTTATTAAATTGACAAAAGG+TGG - chr2_1:11653505-11653524 None:intergenic 20.0%
!!! AAACCTTTTTTAATAATGGA+AGG - chr2_1:11653844-11653863 None:intergenic 20.0%
!!! TTTTAATGAGAATAATGAAG+AGG + chr2_1:11654002-11654021 Msa0195020:five_prime_UTR 20.0%
!! TTTAAAAGTTCATGTCTTTA+TGG + chr2_1:11655087-11655106 Msa0195020:intron 20.0%
!! TTAAAAGTTCATGTCTTTAT+GGG + chr2_1:11655088-11655107 Msa0195020:intron 20.0%
!!! TTTTTAGAAAATAGAGAGAA+GGG - chr2_1:11656250-11656269 None:intergenic 20.0%
!!! ATTTTTAGAAAATAGAGAGA+AGG - chr2_1:11656251-11656270 None:intergenic 20.0%
!!! GGTGGTATTTAATTTAAAAT+AGG + chr2_1:11656341-11656360 Msa0195020:intron 20.0%
!!! TTACAGTGTGTTATTTTAAA+AGG + chr2_1:11656410-11656429 Msa0195020:intron 20.0%
!!! TATTTTAAAAGGAAATAGCT+CGG + chr2_1:11656421-11656440 Msa0195020:intron 20.0%
!! GAGATTTATTGCAAAATAAT+TGG - chr2_1:11656493-11656512 None:intergenic 20.0%
!! TTACCAATATTATCATTGAT+TGG + chr2_1:11656533-11656552 Msa0195020:intron 20.0%
!!! TACCAATATTATCATTGATT+GGG + chr2_1:11656534-11656553 Msa0195020:intron 20.0%
!!! TAACATCGAAAAAGATTTTA+AGG - chr2_1:11656842-11656861 None:intergenic 20.0%
!! TGCATTTGAATTTGAATAAT+TGG + chr2_1:11657785-11657804 Msa0195020:exon 20.0%
!! ATTTGAATTTGAATAATTGG+TGG + chr2_1:11657788-11657807 Msa0195020:exon 20.0%
!! AATTTACTATTACCTGAAAA+GGG - chr2_1:11657864-11657883 None:intergenic 20.0%
!! TAATAGTAAATTCCCTATAA+AGG + chr2_1:11657872-11657891 Msa0195020:three_prime_UTR 20.0%
!! CAAAATGTTTAACCTTTATA+GGG - chr2_1:11657887-11657906 None:intergenic 20.0%
! AAAGATTAAGAGATTGAAGA+TGG - chr2_1:11651744-11651763 None:intergenic 25.0%
!!! ATGTTCTCAAGTTTTATTCA+TGG + chr2_1:11652076-11652095 Msa0195020:five_prime_UTR 25.0%
! CATATTAAAGACGAATCATT+TGG + chr2_1:11652232-11652251 Msa0195020:intron 25.0%
!!! GTTGTTTGCTTATACTTTTT+AGG + chr2_1:11652400-11652419 Msa0195020:intron 25.0%
!! TTATGGTAGCTTCATTATTT+TGG + chr2_1:11652543-11652562 Msa0195020:intron 25.0%
! CAAATTGTAGCATCTTAATT+TGG + chr2_1:11652671-11652690 Msa0195020:intron 25.0%
! GAGTAATACAATTAAACTGA+GGG - chr2_1:11652859-11652878 None:intergenic 25.0%
! AGAGTAATACAATTAAACTG+AGG - chr2_1:11652860-11652879 None:intergenic 25.0%
! TAAAATTGGATACTATGTTC+AGG + chr2_1:11652889-11652908 Msa0195020:intron 25.0%
! TTCAGGTATTTACATTCAAA+TGG + chr2_1:11652906-11652925 Msa0195020:intron 25.0%
! AATATCCTACTAGATGAAAA+TGG + chr2_1:11652957-11652976 Msa0195020:five_prime_UTR 25.0%
! ATATCCTACTAGATGAAAAT+GGG + chr2_1:11652958-11652977 Msa0195020:five_prime_UTR 25.0%
!! AACCTTTTGTTAATATAAGC+TGG + chr2_1:11653043-11653062 Msa0195020:intron 25.0%
! ATCCAGCTTATATTAACAAA+AGG - chr2_1:11653048-11653067 None:intergenic 25.0%
!!! AGTGAATTTAGTTTTCCAAA+AGG - chr2_1:11653587-11653606 None:intergenic 25.0%
! GATCCTTCCATTATTAAAAA+AGG + chr2_1:11653838-11653857 Msa0195020:five_prime_UTR 25.0%
!!! AGTGTTCTCAATTTTAACAT+CGG - chr2_1:11653968-11653987 None:intergenic 25.0%
! ACACTGAAAATGATATACAT+CGG + chr2_1:11654118-11654137 Msa0195020:five_prime_UTR 25.0%
! TTTATGAGAATGAGCATTAT+TGG - chr2_1:11654609-11654628 None:intergenic 25.0%
! CTGACAAATAAAGTTAAGAT+AGG - chr2_1:11655066-11655085 None:intergenic 25.0%
! TAAAAGTTCATGTCTTTATG+GGG + chr2_1:11655089-11655108 Msa0195020:intron 25.0%
! TCCAAATTCATTAATTTCCT+TGG + chr2_1:11655139-11655158 Msa0195020:five_prime_UTR 25.0%
! ACCAAGGAAATTAATGAATT+TGG - chr2_1:11655143-11655162 None:intergenic 25.0%
! ATTAATTTCCTTGGTATCAT+CGG + chr2_1:11655148-11655167 Msa0195020:five_prime_UTR 25.0%
!!! TAGTGAAGTTTTAAAAGGAA+AGG + chr2_1:11655591-11655610 Msa0195020:five_prime_UTR 25.0%
! GATTACTGGATATAATAACT+GGG + chr2_1:11655782-11655801 Msa0195020:five_prime_UTR 25.0%
! ATTACTGGATATAATAACTG+GGG + chr2_1:11655783-11655802 Msa0195020:five_prime_UTR 25.0%
! TAAAAGGAAACAAGATGTAA+TGG - chr2_1:11656022-11656041 None:intergenic 25.0%
! TAATTGTGCTTAGATATTGT+CGG + chr2_1:11656080-11656099 Msa0195020:intron 25.0%
!! TGTCATTTACAAGATAAAGA+GGG - chr2_1:11656208-11656227 None:intergenic 25.0%
!! TTGTCATTTACAAGATAAAG+AGG - chr2_1:11656209-11656228 None:intergenic 25.0%
!!! TTTTAGAAAATAGAGAGAAG+GGG - chr2_1:11656249-11656268 None:intergenic 25.0%
! TAAAAATAATAAAGGGCGAT+TGG + chr2_1:11656264-11656283 Msa0195020:intron 25.0%
!! AATTGCACTAATCTTCTTTT+AGG - chr2_1:11656303-11656322 None:intergenic 25.0%
!! TTGTTTATTGATTGACTTTC+AGG + chr2_1:11656656-11656675 Msa0195020:intron 25.0%
!! TGTTTATTGATTGACTTTCA+GGG + chr2_1:11656657-11656676 Msa0195020:intron 25.0%
! TTTCAATTGGGAAAGTAATT+TGG - chr2_1:11657165-11657184 None:intergenic 25.0%
! ATAAGAGATATAACAGACTT+TGG + chr2_1:11657386-11657405 Msa0195020:CDS 25.0%
! ATTTACTATTACCTGAAAAG+GGG - chr2_1:11657863-11657882 None:intergenic 25.0%
! GAATTTACTATTACCTGAAA+AGG - chr2_1:11657865-11657884 None:intergenic 25.0%
! CCAAAATGTTTAACCTTTAT+AGG - chr2_1:11657888-11657907 None:intergenic 25.0%
!! CCTATAAAGGTTAAACATTT+TGG + chr2_1:11657885-11657904 Msa0195020:three_prime_UTR 25.0%
AATTTGCAGACTGTTTACAA+AGG + chr2_1:11651781-11651800 Msa0195020:intron 30.0%
TAACCTGCAAAAGAGAAAAT+CGG - chr2_1:11652029-11652048 None:intergenic 30.0%
GGGATCTACTTTCTATATTA+CGG + chr2_1:11652472-11652491 Msa0195020:five_prime_UTR 30.0%
AATGAAGCTACCATAATCAA+AGG - chr2_1:11652539-11652558 None:intergenic 30.0%
!!! TAGCTTCATTATTTTGGACT+AGG + chr2_1:11652549-11652568 Msa0195020:intron 30.0%
TAATTACAAAGACGAATTGC+AGG + chr2_1:11652739-11652758 Msa0195020:intron 30.0%
AGTTCATTAACAGAATCTTC+AGG - chr2_1:11652776-11652795 None:intergenic 30.0%
TTAAACTGAGGGAAAACAAA+AGG - chr2_1:11652848-11652867 None:intergenic 30.0%
ACTCTTGTATGCACTAAAAT+TGG + chr2_1:11652875-11652894 Msa0195020:intron 30.0%
TCATCTAGTAGGATATTTGA+CGG - chr2_1:11652954-11652973 None:intergenic 30.0%
CTAAAGAAGTAAAGAAACAC+AGG - chr2_1:11653269-11653288 None:intergenic 30.0%
! AGAAATCAGAAGCATAAGAA+TGG - chr2_1:11653357-11653376 None:intergenic 30.0%
ATTCTTATGCTTCTGATTTC+TGG + chr2_1:11653356-11653375 Msa0195020:five_prime_UTR 30.0%
TTCTTATGCTTCTGATTTCT+GGG + chr2_1:11653357-11653376 Msa0195020:five_prime_UTR 30.0%
TACTGTATGAATGTTACACT+GGG + chr2_1:11653392-11653411 Msa0195020:five_prime_UTR 30.0%
TAAAATTGAGAACACTGACA+TGG + chr2_1:11653972-11653991 Msa0195020:five_prime_UTR 30.0%
! TTACTCTCCATTTTCTCATT+GGG - chr2_1:11654072-11654091 None:intergenic 30.0%
! ATTACTCTCCATTTTCTCAT+TGG - chr2_1:11654073-11654092 None:intergenic 30.0%
! GAGAGTAATTTTCAGAATCA+GGG + chr2_1:11654084-11654103 Msa0195020:five_prime_UTR 30.0%
TGAAAATGATATACATCGGT+TGG + chr2_1:11654122-11654141 Msa0195020:five_prime_UTR 30.0%
AAATAGCAGATATGTCAGAA+CGG - chr2_1:11654215-11654234 None:intergenic 30.0%
CATTCAAGATGGCTATAATT+CGG - chr2_1:11654494-11654513 None:intergenic 30.0%
GAATTATAGCCATCTTGAAT+GGG + chr2_1:11654493-11654512 Msa0195020:five_prime_UTR 30.0%
!! TTAGCTAATTCTGGAATTCT+AGG + chr2_1:11654723-11654742 Msa0195020:five_prime_UTR 30.0%
TCTATAACAGACTGAATACT+AGG - chr2_1:11655383-11655402 None:intergenic 30.0%
CAGCTTAAATCTTCTTAACA+CGG + chr2_1:11655466-11655485 Msa0195020:five_prime_UTR 30.0%
AGATGCATTTCTACATATTG+TGG + chr2_1:11655744-11655763 Msa0195020:five_prime_UTR 30.0%
GTTATTATATCCAGTAATCC+AGG - chr2_1:11655781-11655800 None:intergenic 30.0%
GGATTACTGGATATAATAAC+TGG + chr2_1:11655781-11655800 Msa0195020:five_prime_UTR 30.0%
! AACAAGTGAATGTTGGATTT+TGG - chr2_1:11655874-11655893 None:intergenic 30.0%
ATTGTCGGTATTTCATTTAC+TGG + chr2_1:11656095-11656114 Msa0195020:intron 30.0%
TCATTTACTGGTGAAATATG+CGG + chr2_1:11656107-11656126 Msa0195020:intron 30.0%
! ATATTTCTAAGCATACCTCA+AGG + chr2_1:11656367-11656386 Msa0195020:intron 30.0%
! TATTTCTAAGCATACCTCAA+GGG + chr2_1:11656368-11656387 Msa0195020:intron 30.0%
TATTGCAAAATAATTGGTGC+AGG - chr2_1:11656487-11656506 None:intergenic 30.0%
AGCCCAATCAATGATAATAT+TGG - chr2_1:11656539-11656558 None:intergenic 30.0%
! AATATTATCATTGATTGGGC+TGG + chr2_1:11656538-11656557 Msa0195020:intron 30.0%
! ATATTATCATTGATTGGGCT+GGG + chr2_1:11656539-11656558 Msa0195020:intron 30.0%
AAATTCGAAGAAGGGTTATT+TGG - chr2_1:11656695-11656714 None:intergenic 30.0%
TATAGAGAACTGTCAAACTA+GGG - chr2_1:11656785-11656804 None:intergenic 30.0%
TTATAGAGAACTGTCAAACT+AGG - chr2_1:11656786-11656805 None:intergenic 30.0%
TAGTTTGACAGTTCTCTATA+AGG + chr2_1:11656785-11656804 Msa0195020:CDS 30.0%
AGTTTGACAGTTCTCTATAA+GGG + chr2_1:11656786-11656805 Msa0195020:CDS 30.0%
AATCTTTGCTCTTCTTCAAT+TGG - chr2_1:11656885-11656904 None:intergenic 30.0%
TCTGTGCAAATATAGGAATA+GGG - chr2_1:11656977-11656996 None:intergenic 30.0%
TTCTGTGCAAATATAGGAAT+AGG - chr2_1:11656978-11656997 None:intergenic 30.0%
AACATTGTGAAATTGTCTTC+AGG - chr2_1:11657055-11657074 None:intergenic 30.0%
TTTCCCAATTGAAAGTTGTT+AGG + chr2_1:11657171-11657190 Msa0195020:CDS 30.0%
ACTTCAATTCTTGAAATCTC+TGG - chr2_1:11657677-11657696 None:intergenic 30.0%
TGTTATGATTGTCCTTATTC+TGG + chr2_1:11657816-11657835 Msa0195020:three_prime_UTR 30.0%
AAATTTCACCAACCAGAATA+AGG - chr2_1:11657831-11657850 None:intergenic 30.0%
AGTCTGCAAATTCAGAAACA+CGG - chr2_1:11651773-11651792 None:intergenic 35.0%
CGATAAATCTCAGAAGAACA+AGG + chr2_1:11651846-11651865 Msa0195020:five_prime_UTR 35.0%
!! TAACCGATTTTCTCTTTTGC+AGG + chr2_1:11652023-11652042 Msa0195020:intron 35.0%
! GATTTTCTCTTTTGCAGGTT+AGG + chr2_1:11652028-11652047 Msa0195020:intron 35.0%
TTTACTTCTTGGCTGAATAC+AGG + chr2_1:11652300-11652319 Msa0195020:intron 35.0%
!! TTGGTATTGGAGTATTGTGT+TGG + chr2_1:11652447-11652466 Msa0195020:five_prime_UTR 35.0%
!! TATTGGAGTATTGTGTTGGT+GGG + chr2_1:11652451-11652470 Msa0195020:five_prime_UTR 35.0%
TCTACTTTCTATATTACGGC+AGG + chr2_1:11652476-11652495 Msa0195020:five_prime_UTR 35.0%
! GTTTTACGAGCCTTTGATTA+TGG + chr2_1:11652526-11652545 Msa0195020:intron 35.0%
TGATATCTCTTTCAACCTTC+TGG - chr2_1:11653116-11653135 None:intergenic 35.0%
ATCAAAAGTTCCTTCTTCCT+CGG + chr2_1:11653132-11653151 Msa0195020:five_prime_UTR 35.0%
AAAGTTAGTAAAGCATACCG+AGG - chr2_1:11653152-11653171 None:intergenic 35.0%
TGACAGCTATAGTTGAATAG+AGG - chr2_1:11653211-11653230 None:intergenic 35.0%
GTACTGTATGAATGTTACAC+TGG + chr2_1:11653391-11653410 Msa0195020:five_prime_UTR 35.0%
! AAATTGACAAAAGGTGGACT+TGG - chr2_1:11653499-11653518 None:intergenic 35.0%
CAATGCTTATCAGAACGTAA+TGG + chr2_1:11653664-11653683 Msa0195020:five_prime_UTR 35.0%
GAGATAAGTCTTCTCATAAC+AGG + chr2_1:11653686-11653705 Msa0195020:five_prime_UTR 35.0%
TTTAACATCGGCATCTTTCT+CGG - chr2_1:11653956-11653975 None:intergenic 35.0%
! GGAGAGTAATTTTCAGAATC+AGG + chr2_1:11654083-11654102 Msa0195020:five_prime_UTR 35.0%
CTTAAAGATGACTTAGGATC+TGG + chr2_1:11654270-11654289 Msa0195020:five_prime_UTR 35.0%
! CATTTGTCAACTTTTCTGCT+GGG - chr2_1:11654381-11654400 None:intergenic 35.0%
CAGAAAAGTTGACAAATGCT+CGG + chr2_1:11654383-11654402 Msa0195020:five_prime_UTR 35.0%
TTAGGCATCTTGACAAATTC+AGG - chr2_1:11654447-11654466 None:intergenic 35.0%
AGATGGCTATAATTCGGTTA+TGG - chr2_1:11654488-11654507 None:intergenic 35.0%
CGAATTATAGCCATCTTGAA+TGG + chr2_1:11654492-11654511 Msa0195020:five_prime_UTR 35.0%
!! CACATTTTGTTTCTCTCCAA+TGG - chr2_1:11654526-11654545 None:intergenic 35.0%
CATTGGAGAGAAACAAAATG+TGG + chr2_1:11654524-11654543 Msa0195020:five_prime_UTR 35.0%
GAGAGAAACAAAATGTGGTT+AGG + chr2_1:11654529-11654548 Msa0195020:five_prime_UTR 35.0%
GATGACAGTTTAGCTAATTC+TGG + chr2_1:11654714-11654733 Msa0195020:five_prime_UTR 35.0%
TGGAATTCTAGGTTCATTGA+CGG + chr2_1:11654734-11654753 Msa0195020:five_prime_UTR 35.0%
! CTTCAAGTTACATAAGCAGA+TGG - chr2_1:11654952-11654971 None:intergenic 35.0%
ATCGAGAATATTTGCAGTCA+AGG + chr2_1:11655221-11655240 Msa0195020:five_prime_UTR 35.0%
AGAATATTTGCAGTCAAGGA+GGG + chr2_1:11655225-11655244 Msa0195020:five_prime_UTR 35.0%
TCTCTGCTATATCTATAGAG+CGG + chr2_1:11655289-11655308 Msa0195020:five_prime_UTR 35.0%
ATAACAGACTGAATACTAGG+AGG - chr2_1:11655380-11655399 None:intergenic 35.0%
TATAGAGAAGCTCTCATTCA+AGG + chr2_1:11655397-11655416 Msa0195020:five_prime_UTR 35.0%
AGTCACATGTTGACAAATGT+TGG + chr2_1:11655500-11655519 Msa0195020:five_prime_UTR 35.0%
CAACAAAAGCCAAAAGACTT+GGG - chr2_1:11655564-11655583 None:intergenic 35.0%
TCAACAAAAGCCAAAAGACT+TGG - chr2_1:11655565-11655584 None:intergenic 35.0%
!!! CAGGGTAGTGAAGTTTTAAA+AGG + chr2_1:11655586-11655605 Msa0195020:five_prime_UTR 35.0%
TTATGGCTACAAAAGAACTG+TGG - chr2_1:11655664-11655683 None:intergenic 35.0%
! TAGCCATAAGTTACTTTCAG+TGG + chr2_1:11655675-11655694 Msa0195020:five_prime_UTR 35.0%
AACAGGAAACAAGTGAATGT+TGG - chr2_1:11655881-11655900 None:intergenic 35.0%
CTGAACTTTCAAGAAGATGA+AGG - chr2_1:11655906-11655925 None:intergenic 35.0%
! TTCAGCTTTTAAGCACAAAG+TGG + chr2_1:11655921-11655940 Msa0195020:CDS 35.0%
GGCAAATCTGATTAAACTTG+CGG + chr2_1:11655969-11655988 Msa0195020:CDS 35.0%
AAATCTGATTAAACTTGCGG+AGG + chr2_1:11655972-11655991 Msa0195020:CDS 35.0%
GAGGAAAACATGCGATTAAA+AGG - chr2_1:11656038-11656057 None:intergenic 35.0%
!! GAAGTGTTGATCTCAAAAGA+AGG + chr2_1:11656145-11656164 Msa0195020:intron 35.0%
! TTACAAGATAAAGAGGGTGT+AGG - chr2_1:11656202-11656221 None:intergenic 35.0%
! TGCAATTTTCCCACCAAATA+TGG + chr2_1:11656316-11656335 Msa0195020:intron 35.0%
! GCAATTTTCCCACCAAATAT+GGG + chr2_1:11656317-11656336 Msa0195020:intron 35.0%
TAAATACCACCACCCATATT+TGG - chr2_1:11656332-11656351 None:intergenic 35.0%
AATAATTGGTGCAGGTTTAG+CGG - chr2_1:11656479-11656498 None:intergenic 35.0%
!! CGACTCTAAAATTCGAAGAA+GGG - chr2_1:11656703-11656722 None:intergenic 35.0%
! CAAATCCCGACATTTTCTTA+CGG + chr2_1:11656751-11656770 Msa0195020:CDS 35.0%
! AAATCCCGACATTTTCTTAC+GGG + chr2_1:11656752-11656771 Msa0195020:CDS 35.0%
ATTTCCCGTAAGAAAATGTC+GGG - chr2_1:11656759-11656778 None:intergenic 35.0%
GATTTCCCGTAAGAAAATGT+CGG - chr2_1:11656760-11656779 None:intergenic 35.0%
AGTTCTCTATAAGGGTAACA+AGG + chr2_1:11656794-11656813 Msa0195020:CDS 35.0%
AGAAGCTTCTGTGCAAATAT+AGG - chr2_1:11656984-11657003 None:intergenic 35.0%
!!! CAATGTTTTGAGTTCTTGCT+TGG + chr2_1:11657068-11657087 Msa0195020:CDS 35.0%
CCTCCTAACAACTTTCAATT+GGG - chr2_1:11657177-11657196 None:intergenic 35.0%
TCCTCCTAACAACTTTCAAT+TGG - chr2_1:11657178-11657197 None:intergenic 35.0%
TTGAAAGTTGTTAGGAGGAT+CGG + chr2_1:11657179-11657198 Msa0195020:CDS 35.0%
CTTGAGTTTGTATGTGCAAA+GGG + chr2_1:11657209-11657228 Msa0195020:CDS 35.0%
ATATCTCTTATGCATTGCTG+CGG - chr2_1:11657377-11657396 None:intergenic 35.0%
ATTCAAATTCAAATGCAGCG+AGG - chr2_1:11657782-11657801 None:intergenic 35.0%
ATGATTGTCCTTATTCTGGT+TGG + chr2_1:11657820-11657839 Msa0195020:three_prime_UTR 35.0%
AGTTTGTGTACTCTGTATGT+TGG + chr2_1:11657944-11657963 Msa0195020:three_prime_UTR 35.0%
!! TGTTTTTGTAGATGCAGCTC+AGG - chr2_1:11651996-11652015 None:intergenic 40.0%
CAAGAAGTAAAGTCTGGTCA+AGG - chr2_1:11652291-11652310 None:intergenic 40.0%
CTTGACCAGACTTTACTTCT+TGG + chr2_1:11652289-11652308 Msa0195020:intron 40.0%
TTCAGCCAAGAAGTAAAGTC+TGG - chr2_1:11652297-11652316 None:intergenic 40.0%
CAAACAACACTTGAGAACTG+AGG - chr2_1:11652388-11652407 None:intergenic 40.0%
ATGAAACGTCTGCTCACTTA+TGG + chr2_1:11652424-11652443 Msa0195020:five_prime_UTR 40.0%
! TGCTCACTTATGGTTGGTAT+TGG + chr2_1:11652434-11652453 Msa0195020:five_prime_UTR 40.0%
!! GTATTGGAGTATTGTGTTGG+TGG + chr2_1:11652450-11652469 Msa0195020:five_prime_UTR 40.0%
!! ATTGGAGTATTGTGTTGGTG+GGG + chr2_1:11652452-11652471 Msa0195020:five_prime_UTR 40.0%
!! AGCTTTGTAGAAGCTTTGAG+TGG + chr2_1:11652603-11652622 Msa0195020:intron 40.0%
GTAGGATATTTGACGGTTTC+AGG - chr2_1:11652947-11652966 None:intergenic 40.0%
! TACGCCCATTTTCATCTAGT+AGG - chr2_1:11652965-11652984 None:intergenic 40.0%
AGATGAAAATGGGCGTACAA+AGG + chr2_1:11652968-11652987 Msa0195020:five_prime_UTR 40.0%
TTGATGCAGCTCTGTGATTT+CGG + chr2_1:11653085-11653104 Msa0195020:intron 40.0%
CATCCATATGCATGTACTGA+TGG + chr2_1:11653184-11653203 Msa0195020:intron 40.0%
AATTCTCTTCCCACAAAAGG+AGG - chr2_1:11653421-11653440 None:intergenic 40.0%
GTGAATTCTCTTCCCACAAA+AGG - chr2_1:11653424-11653443 None:intergenic 40.0%
ATCCAGCTGAAAGAATACAG+TGG + chr2_1:11653542-11653561 Msa0195020:five_prime_UTR 40.0%
! TTTTTCACGAGATTTGGGAG+GGG - chr2_1:11653713-11653732 None:intergenic 40.0%
!! CTTTTTCACGAGATTTGGGA+GGG - chr2_1:11653714-11653733 None:intergenic 40.0%
!! TCTTTTTCACGAGATTTGGG+AGG - chr2_1:11653715-11653734 None:intergenic 40.0%
!! CCGTCTTTTTCACGAGATTT+GGG - chr2_1:11653718-11653737 None:intergenic 40.0%
CCCAAATCTCGTGAAAAAGA+CGG + chr2_1:11653715-11653734 Msa0195020:five_prime_UTR 40.0%
CCAAATCTCGTGAAAAAGAC+GGG + chr2_1:11653716-11653735 Msa0195020:five_prime_UTR 40.0%
GTCTGAGTTCTTTGTCCATT+TGG - chr2_1:11653781-11653800 None:intergenic 40.0%
TGGACAAAGAACTCAGACAA+AGG + chr2_1:11653783-11653802 Msa0195020:five_prime_UTR 40.0%
GGACAAAGAACTCAGACAAA+GGG + chr2_1:11653784-11653803 Msa0195020:five_prime_UTR 40.0%
! ATTTTCTCATTGGGCACAGA+AGG - chr2_1:11654063-11654082 None:intergenic 40.0%
TTCTGTGCCCAATGAGAAAA+TGG + chr2_1:11654062-11654081 Msa0195020:five_prime_UTR 40.0%
AAACGTCCTTGAATCATCTG+AGG - chr2_1:11654172-11654191 None:intergenic 40.0%
!!! GCCTCTGTTTTTTCACTAGA+GGG - chr2_1:11654251-11654270 None:intergenic 40.0%
!!! AGCCTCTGTTTTTTCACTAG+AGG - chr2_1:11654252-11654271 None:intergenic 40.0%
CAGAGGCTTAAAGATGACTT+AGG + chr2_1:11654264-11654283 Msa0195020:five_prime_UTR 40.0%
AGATGGATGCCAAATAACCT+GGG - chr2_1:11654334-11654353 None:intergenic 40.0%
! GCATTTGTCAACTTTTCTGC+TGG - chr2_1:11654382-11654401 None:intergenic 40.0%
! CATTCCTTCACTTCCTTTTG+AGG + chr2_1:11654410-11654429 Msa0195020:five_prime_UTR 40.0%
!! TTGAATGGGAGTACTACCAT+TGG + chr2_1:11654507-11654526 Msa0195020:five_prime_UTR 40.0%
CAGCCAATATCTTGACCAAT+GGG + chr2_1:11654583-11654602 Msa0195020:five_prime_UTR 40.0%
AATGAGCATTATTGGCCCAT+TGG - chr2_1:11654601-11654620 None:intergenic 40.0%
AAAGTTGCTACGTCAATCCA+AGG + chr2_1:11654626-11654645 Msa0195020:five_prime_UTR 40.0%
ATTCTAGGTTCATTGACGGA+TGG + chr2_1:11654738-11654757 Msa0195020:five_prime_UTR 40.0%
! TTCATTGACGGATGGTCTTA+GGG + chr2_1:11654746-11654765 Msa0195020:five_prime_UTR 40.0%
ATAGGCAAGAAAAAGTGAGG+AGG + chr2_1:11654769-11654788 Msa0195020:five_prime_UTR 40.0%
! AAAAGTGAGGAGGTTTTCCA+TGG + chr2_1:11654779-11654798 Msa0195020:five_prime_UTR 40.0%
TCCTTTGATGGAGATTCAAG+GGG - chr2_1:11654867-11654886 None:intergenic 40.0%
GTCCTTTGATGGAGATTCAA+GGG - chr2_1:11654868-11654887 None:intergenic 40.0%
TGTCCTTTGATGGAGATTCA+AGG - chr2_1:11654869-11654888 None:intergenic 40.0%
TAGGCATGTTTCTCACAACA+TGG + chr2_1:11655014-11655033 Msa0195020:intron 40.0%
! GTATCATCGGTATTGAGGAA+AGG + chr2_1:11655161-11655180 Msa0195020:five_prime_UTR 40.0%
GAGAATATTTGCAGTCAAGG+AGG + chr2_1:11655224-11655243 Msa0195020:five_prime_UTR 40.0%
GAATATTTGCAGTCAAGGAG+GGG + chr2_1:11655226-11655245 Msa0195020:five_prime_UTR 40.0%
ATACCTTATGCAACTTGCAG+AGG + chr2_1:11655526-11655545 Msa0195020:five_prime_UTR 40.0%
TATCCTCTGCAAGTTGCATA+AGG - chr2_1:11655532-11655551 None:intergenic 40.0%
!!! TCTTTTGGCTTTTGTTGAGC+AGG + chr2_1:11655567-11655586 Msa0195020:five_prime_UTR 40.0%
!!! CTTTTGGCTTTTGTTGAGCA+GGG + chr2_1:11655568-11655587 Msa0195020:five_prime_UTR 40.0%
CCACCACTGAAAGTAACTTA+TGG - chr2_1:11655681-11655700 None:intergenic 40.0%
! CCATAAGTTACTTTCAGTGG+TGG + chr2_1:11655678-11655697 Msa0195020:five_prime_UTR 40.0%
ATCCACTATTCCTGGATTAC+TGG + chr2_1:11655768-11655787 Msa0195020:five_prime_UTR 40.0%
ATCCAGTAATCCAGGAATAG+TGG - chr2_1:11655773-11655792 None:intergenic 40.0%
TCAAGAAGATGAAGGACAAC+AGG - chr2_1:11655898-11655917 None:intergenic 40.0%
GAAACAAGATGTAATGGCTG+AGG - chr2_1:11656016-11656035 None:intergenic 40.0%
TCGACAGAACTCATGATTTG+AGG - chr2_1:11656057-11656076 None:intergenic 40.0%
! ATTTTCCCACCAAATATGGG+TGG + chr2_1:11656320-11656339 Msa0195020:intron 40.0%
TGGGTCATACCTTTATTGGA+TGG + chr2_1:11656558-11656577 Msa0195020:intron 40.0%
!! GCGACTCTAAAATTCGAAGA+AGG - chr2_1:11656704-11656723 None:intergenic 40.0%
!!! TCGAATTTTAGAGTCGCTCA+CGG + chr2_1:11656707-11656726 Msa0195020:CDS 40.0%
AGAAAATGTCGGGATTTGCA+AGG - chr2_1:11656749-11656768 None:intergenic 40.0%
CTCTATAAGGGTAACAAGGA+TGG + chr2_1:11656798-11656817 Msa0195020:CDS 40.0%
TCTTCATCTTCGATCAAGGT+CGG - chr2_1:11656954-11656973 None:intergenic 40.0%
TGTTAAGCTGTGTCTTGCTT+TGG + chr2_1:11657118-11657137 Msa0195020:CDS 40.0%
TAATTTGGACTCCATCTCAG+GGG - chr2_1:11657150-11657169 None:intergenic 40.0%
GTAATTTGGACTCCATCTCA+GGG - chr2_1:11657151-11657170 None:intergenic 40.0%
AGTAATTTGGACTCCATCTC+AGG - chr2_1:11657152-11657171 None:intergenic 40.0%
CCCAATTGAAAGTTGTTAGG+AGG + chr2_1:11657174-11657193 Msa0195020:CDS 40.0%
CCTTTGCACATACAAACTCA+AGG - chr2_1:11657211-11657230 None:intergenic 40.0%
CCTTGAGTTTGTATGTGCAA+AGG + chr2_1:11657208-11657227 Msa0195020:CDS 40.0%
GTTTGTATGTGCAAAGGGTA+TGG + chr2_1:11657214-11657233 Msa0195020:CDS 40.0%
! AAAGGGTATGGAAGATTTGC+TGG + chr2_1:11657226-11657245 Msa0195020:CDS 40.0%
! ACAGACTTTGGAAGCAATGT+TGG + chr2_1:11657398-11657417 Msa0195020:CDS 40.0%
AGAAGCTATATCAGCAACAC+TGG - chr2_1:11657456-11657475 None:intergenic 40.0%
TGATATAGCTTCTCAGTGTG+TGG + chr2_1:11657463-11657482 Msa0195020:CDS 40.0%
!! GTGTGTGGTTTTACTGCTTA+AGG + chr2_1:11657478-11657497 Msa0195020:CDS 40.0%
ATCCTAGAATCCTGGAGTAA+AGG + chr2_1:11657557-11657576 Msa0195020:CDS 40.0%
TTCTCTGCACTGTTAAGTGA+GGG - chr2_1:11657586-11657605 None:intergenic 40.0%
ATTCTCTGCACTGTTAAGTG+AGG - chr2_1:11657587-11657606 None:intergenic 40.0%
CAGAGAATGCTTCATGCTTT+AGG + chr2_1:11657599-11657618 Msa0195020:CDS 40.0%
TTTAGCCAAAACTGCTGGAT+TGG + chr2_1:11657733-11657752 Msa0195020:CDS 40.0%
! TTGTAACTTCTCCCCTTTTC+AGG + chr2_1:11657849-11657868 Msa0195020:three_prime_UTR 40.0%
!! CATTTTGGTGAATTCCACTC+AGG + chr2_1:11657900-11657919 Msa0195020:three_prime_UTR 40.0%
!! GATGTGGTACTGGTTCATGA+TGG - chr2_1:11651656-11651675 None:intergenic 45.0%
TACCACATCTACGAAGCCAT+TGG + chr2_1:11651667-11651686 Msa0195020:five_prime_UTR 45.0%
GAGAACTCGAGTTTGAGTAC+TGG + chr2_1:11652255-11652274 Msa0195020:intron 45.0%
!! ACTCGAGTTTGAGTACTGGT+CGG + chr2_1:11652259-11652278 Msa0195020:intron 45.0%
ACAACACTTGAGAACTGAGG+CGG - chr2_1:11652385-11652404 None:intergenic 45.0%
AACGTCTGCTCACTTATGGT+TGG + chr2_1:11652428-11652447 Msa0195020:five_prime_UTR 45.0%
! CATACTGCAAAGCTCTGACA+AGG - chr2_1:11652808-11652827 None:intergenic 45.0%
GTAAAGCATACCGAGGAAGA+AGG - chr2_1:11653145-11653164 None:intergenic 45.0%
GGTCCATCAGTACATGCATA+TGG - chr2_1:11653190-11653209 None:intergenic 45.0%
TAGTTGCCTCAAGCAAAACG+TGG + chr2_1:11653286-11653305 Msa0195020:intron 45.0%
CCACCATCTTCAAAAAGCTC+CGG - chr2_1:11653331-11653350 None:intergenic 45.0%
! TGGAGTCGGGTCTGAAATTA+TGG - chr2_1:11653461-11653480 None:intergenic 45.0%
TGCCACTGTATTCTTTCAGC+TGG - chr2_1:11653547-11653566 None:intergenic 45.0%
ATACAGTGGCATGAGCTTTG+TGG + chr2_1:11653556-11653575 Msa0195020:five_prime_UTR 45.0%
!! AGCTTTGTGGACATGCCTTT+TGG + chr2_1:11653569-11653588 Msa0195020:five_prime_UTR 45.0%
ATATCAGCAAACGCAGGTTG+AGG - chr2_1:11653625-11653644 None:intergenic 45.0%
TCAGTCATATCAGCAAACGC+AGG - chr2_1:11653631-11653650 None:intergenic 45.0%
!! CCCGTCTTTTTCACGAGATT+TGG - chr2_1:11653719-11653738 None:intergenic 45.0%
TCTCGTGAAAAAGACGGGAA+AGG + chr2_1:11653721-11653740 Msa0195020:five_prime_UTR 45.0%
CTCGTGAAAAAGACGGGAAA+GGG + chr2_1:11653722-11653741 Msa0195020:five_prime_UTR 45.0%
TCGTGAAAAAGACGGGAAAG+GGG + chr2_1:11653723-11653742 Msa0195020:five_prime_UTR 45.0%
! TGCTCTTGTTGGTGTCTCAA+TGG - chr2_1:11653755-11653774 None:intergenic 45.0%
!! CCATTTGGTGTTGCTCTTGT+TGG - chr2_1:11653766-11653785 None:intergenic 45.0%
CCAACAAGAGCAACACCAAA+TGG + chr2_1:11653763-11653782 Msa0195020:five_prime_UTR 45.0%
AGAACTCAGACAAAGGGTTC+TGG + chr2_1:11653790-11653809 Msa0195020:five_prime_UTR 45.0%
GACGCACTTGACGAAAATGA+TGG + chr2_1:11654024-11654043 Msa0195020:five_prime_UTR 45.0%
GCCCTCTAGTGAAAAAACAG+AGG + chr2_1:11654247-11654266 Msa0195020:five_prime_UTR 45.0%
ACGACATCTCCCAGGTTATT+TGG + chr2_1:11654322-11654341 Msa0195020:five_prime_UTR 45.0%
CAGATGGATGCCAAATAACC+TGG - chr2_1:11654335-11654354 None:intergenic 45.0%
! ACTTTTCTGCTGGGCATTAC+AGG - chr2_1:11654372-11654391 None:intergenic 45.0%
AACGCCTCAAAAGGAAGTGA+AGG - chr2_1:11654417-11654436 None:intergenic 45.0%
CAAGATGCCTAAAGAGCAAC+TGG + chr2_1:11654455-11654474 Msa0195020:five_prime_UTR 45.0%
GGTAGTACTCCCATTCAAGA+TGG - chr2_1:11654505-11654524 None:intergenic 45.0%
CATTAGTGCTCAACATCTCG+AGG - chr2_1:11654557-11654576 None:intergenic 45.0%
GCAGCCAATATCTTGACCAA+TGG + chr2_1:11654582-11654601 Msa0195020:five_prime_UTR 45.0%
TGGCCCATTGGTCAAGATAT+TGG - chr2_1:11654589-11654608 None:intergenic 45.0%
! GTTCAACTTGCTTCGCTGAT+TGG + chr2_1:11654663-11654682 Msa0195020:five_prime_UTR 45.0%
! GTTCATTGACGGATGGTCTT+AGG + chr2_1:11654745-11654764 Msa0195020:five_prime_UTR 45.0%
GGGATAGGCAAGAAAAAGTG+AGG + chr2_1:11654766-11654785 Msa0195020:five_prime_UTR 45.0%
! AGGTTTTCCATGGCTGCATT+GGG + chr2_1:11654789-11654808 Msa0195020:five_prime_UTR 45.0%
ATCCCTAGAGTCTGCACTTT+GGG - chr2_1:11654838-11654857 None:intergenic 45.0%
TATCCCTAGAGTCTGCACTT+TGG - chr2_1:11654839-11654858 None:intergenic 45.0%
TCCCCTTGAATCTCCATCAA+AGG + chr2_1:11654863-11654882 Msa0195020:five_prime_UTR 45.0%
GCGGTTCTATTGTCCTTTGA+TGG - chr2_1:11654879-11654898 None:intergenic 45.0%
GGGGTTAACTTATGTCCACT+TGG + chr2_1:11655108-11655127 Msa0195020:intron 45.0%
CCTCAATACCGATGATACCA+AGG - chr2_1:11655159-11655178 None:intergenic 45.0%
CCTTGGTATCATCGGTATTG+AGG + chr2_1:11655156-11655175 Msa0195020:five_prime_UTR 45.0%
TGCTATATCTATAGAGCGGC+AGG + chr2_1:11655293-11655312 Msa0195020:five_prime_UTR 45.0%
GCTATATCTATAGAGCGGCA+GGG + chr2_1:11655294-11655313 Msa0195020:five_prime_UTR 45.0%
GCTTACTGCAGGATCATGTT+TGG + chr2_1:11655334-11655353 Msa0195020:five_prime_UTR 45.0%
CTTTGACAAGAGCAGAAGCT+AGG - chr2_1:11655424-11655443 None:intergenic 45.0%
CTAGCTTCTGCTCTTGTCAA+AGG + chr2_1:11655422-11655441 Msa0195020:five_prime_UTR 45.0%
CTTCTTAACACGGCAATGCT+TGG + chr2_1:11655476-11655495 Msa0195020:five_prime_UTR 45.0%
!! AGGAAAGGCACTTGTCTTTG+TGG + chr2_1:11655606-11655625 Msa0195020:five_prime_UTR 45.0%
!! AGTTACTTTCAGTGGTGGAC+AGG + chr2_1:11655683-11655702 Msa0195020:five_prime_UTR 45.0%
AAGAGAAGGATGCCTTTGTG+CGG + chr2_1:11655713-11655732 Msa0195020:five_prime_UTR 45.0%
ATCTAAACACTGCCGCACAA+AGG - chr2_1:11655728-11655747 None:intergenic 45.0%
ATTGTGGCATCCACTATTCC+TGG + chr2_1:11655760-11655779 Msa0195020:five_prime_UTR 45.0%
TGGGGATATCCAGCAAATGA+TGG + chr2_1:11655801-11655820 Msa0195020:exon 45.0%
GGGGATATCCAGCAAATGAT+GGG + chr2_1:11655802-11655821 Msa0195020:exon 45.0%
! GATATCCAGCAAATGATGGG+AGG + chr2_1:11655805-11655824 Msa0195020:exon 45.0%
TAAGCGAAGAGATATGCCCA+TGG - chr2_1:11655837-11655856 None:intergenic 45.0%
!!! GGATTTTGGAGCAGATCTAC+TGG - chr2_1:11655860-11655879 None:intergenic 45.0%
TACCACCACCCATATTTGGT+GGG - chr2_1:11656328-11656347 None:intergenic 45.0%
ATACCACCACCCATATTTGG+TGG - chr2_1:11656329-11656348 None:intergenic 45.0%
TAGCAGCTGCCATCCAATAA+AGG - chr2_1:11656570-11656589 None:intergenic 45.0%
!!! AATTTTAGAGTCGCTCACGG+AGG + chr2_1:11656710-11656729 Msa0195020:CDS 45.0%
AGAGAACTGTCAAACTAGGG+AGG - chr2_1:11656782-11656801 None:intergenic 45.0%
CTTCATCTTCGATCAAGGTC+GGG - chr2_1:11656953-11656972 None:intergenic 45.0%
AGGGTCTTCATCTTCGATCA+AGG - chr2_1:11656958-11656977 None:intergenic 45.0%
GAAGCTTCTTGTCATGCTAC+TGG + chr2_1:11656995-11657014 Msa0195020:CDS 45.0%
GTCTTCAGGTGTAGAATGTC+TGG - chr2_1:11657041-11657060 None:intergenic 45.0%
! ATTTGCTGGAGCCAACTCTT+GGG + chr2_1:11657240-11657259 Msa0195020:CDS 45.0%
CGTTCAGTCAGCTGTACAAA+AGG + chr2_1:11657284-11657303 Msa0195020:CDS 45.0%
ACAACAGAGCCAACTCTCTT+AGG + chr2_1:11657317-11657336 Msa0195020:CDS 45.0%
!! GGTGTCTTTCTAGAGTTGAG+TGG + chr2_1:11657419-11657438 Msa0195020:CDS 45.0%
! GAGATTGGTTAGTAGACCAG+TGG - chr2_1:11657522-11657541 None:intergenic 45.0%
TCTACTAACCAATCTCCCCA+AGG + chr2_1:11657526-11657545 Msa0195020:CDS 45.0%
! TCTAGGATCACGGTAACCTT+GGG - chr2_1:11657545-11657564 None:intergenic 45.0%
!! TTCTAGGATCACGGTAACCT+TGG - chr2_1:11657546-11657565 None:intergenic 45.0%
TTACCGTGATCCTAGAATCC+TGG + chr2_1:11657549-11657568 Msa0195020:CDS 45.0%
!! ACTCCAGGATTCTAGGATCA+CGG - chr2_1:11657555-11657574 None:intergenic 45.0%
TGCCTTTACTCCAGGATTCT+AGG - chr2_1:11657562-11657581 None:intergenic 45.0%
TCTCTGCACTGTTAAGTGAG+GGG - chr2_1:11657585-11657604 None:intergenic 45.0%
!!! TATTTTCTAAAAATAATAAA+GGG + chr2_1:11656257-11656276 Msa0195020:intron 5.0%
CTCTCTCTCTCTCTCTCTCT+CGG + chr2_1:11651565-11651584 Msa0195020:five_prime_UTR 50.0%
TGGCTTCGTAGATGTGGTAC+TGG - chr2_1:11651666-11651685 None:intergenic 50.0%
GACCAATGGCTTCGTAGATG+TGG - chr2_1:11651672-11651691 None:intergenic 50.0%
ATCTACGAAGCCATTGGTCG+CGG + chr2_1:11651673-11651692 Msa0195020:five_prime_UTR 50.0%
CATTGGTCGCGGAAGATACT+CGG + chr2_1:11651684-11651703 Msa0195020:five_prime_UTR 50.0%
GCAGCTCTGTGATTTCGGAT+TGG + chr2_1:11653090-11653109 Msa0195020:intron 50.0%
!! GTGATTTCGGATTGGCCAGA+AGG + chr2_1:11653098-11653117 Msa0195020:five_prime_UTR 50.0%
! GGTGTTCCACGTTTTGCTTG+AGG - chr2_1:11653295-11653314 None:intergenic 50.0%
ACGTGGAACACCCTCTTACA+TGG + chr2_1:11653303-11653322 Msa0195020:five_prime_UTR 50.0%
AACACCCTCTTACATGGCTC+CGG + chr2_1:11653309-11653328 Msa0195020:five_prime_UTR 50.0%
!! GCTCCGGAGCTTTTTGAAGA+TGG + chr2_1:11653325-11653344 Msa0195020:five_prime_UTR 50.0%
!! CCGGAGCTTTTTGAAGATGG+TGG + chr2_1:11653328-11653347 Msa0195020:five_prime_UTR 50.0%
! GCTTCTGATTTCTGGGCTCT+AGG + chr2_1:11653364-11653383 Msa0195020:five_prime_UTR 50.0%
! ACTGGGAGACCTCCTTTTGT+GGG + chr2_1:11653409-11653428 Msa0195020:five_prime_UTR 50.0%
! AAGGTGGACTTGGATTCCCA+GGG - chr2_1:11653489-11653508 None:intergenic 50.0%
! AAAGGTGGACTTGGATTCCC+AGG - chr2_1:11653490-11653509 None:intergenic 50.0%
AACAGTTGAGGCGAAGCAGA+AGG + chr2_1:11653816-11653835 Msa0195020:five_prime_UTR 50.0%
TATCGACGTCCCTTGCCAAA+TGG + chr2_1:11653928-11653947 Msa0195020:five_prime_UTR 50.0%
TTCTCGGAGCCATTTGGCAA+GGG - chr2_1:11653940-11653959 None:intergenic 50.0%
TTTCTCGGAGCCATTTGGCA+AGG - chr2_1:11653941-11653960 None:intergenic 50.0%
GCATCTTTCTCGGAGCCATT+TGG - chr2_1:11653946-11653965 None:intergenic 50.0%
!! AGGCGGGATTAGTCACAGAT+GGG - chr2_1:11654152-11654171 None:intergenic 50.0%
ATCCCGCCTCAGATGATTCA+AGG + chr2_1:11654163-11654182 Msa0195020:five_prime_UTR 50.0%
! GTCCTTGAATCATCTGAGGC+GGG - chr2_1:11654168-11654187 None:intergenic 50.0%
CGTCCTTGAATCATCTGAGG+CGG - chr2_1:11654169-11654188 None:intergenic 50.0%
GCAGATATGTCAGAACGGTC+AGG - chr2_1:11654210-11654229 None:intergenic 50.0%
TTCACTAGAGGGCTGACACT+TGG - chr2_1:11654240-11654259 None:intergenic 50.0%
ATCCTCTAACGACATCTCCC+AGG + chr2_1:11654314-11654333 Msa0195020:five_prime_UTR 50.0%
AACCTGGGAGATGTCGTTAG+AGG - chr2_1:11654319-11654338 None:intergenic 50.0%
GGTCTGACTGAGAGATCAGA+TGG - chr2_1:11654351-11654370 None:intergenic 50.0%
GATGCCTAAAGAGCAACTGG+AGG + chr2_1:11654458-11654477 Msa0195020:five_prime_UTR 50.0%
AGTGCCTCCAGTTGCTCTTT+AGG - chr2_1:11654465-11654484 None:intergenic 50.0%
GCTACGTCAATCCAAGGCAT+CGG + chr2_1:11654632-11654651 Msa0195020:five_prime_UTR 50.0%
! TGACGGATGGTCTTAGGGAT+AGG + chr2_1:11654751-11654770 Msa0195020:five_prime_UTR 50.0%
! GAGGTTTTCCATGGCTGCAT+TGG + chr2_1:11654788-11654807 Msa0195020:five_prime_UTR 50.0%
CACCCAAAGTGCAGACTCTA+GGG + chr2_1:11654833-11654852 Msa0195020:five_prime_UTR 50.0%
AAGGACAATAGAACCGCGCA+TGG + chr2_1:11654882-11654901 Msa0195020:five_prime_UTR 50.0%
ACTTATGTCCACTTGGCTGC+AGG + chr2_1:11655115-11655134 Msa0195020:intron 50.0%
! ATTTGGAACCTGCAGCCAAG+TGG - chr2_1:11655126-11655145 None:intergenic 50.0%
! CAGGGAAACTGGAAAGCATG+AGG + chr2_1:11655312-11655331 Msa0195020:five_prime_UTR 50.0%
! GAAAGCATGAGGCTTACTGC+AGG + chr2_1:11655323-11655342 Msa0195020:five_prime_UTR 50.0%
!! AAGCTGATTTGCTGCTCTCG+TGG - chr2_1:11655452-11655471 None:intergenic 50.0%
! TCCAGCAAATGATGGGAGGA+AGG + chr2_1:11655809-11655828 Msa0195020:exon 50.0%
TGGCGACACTTCCTGTTCTA+CGG + chr2_1:11655941-11655960 Msa0195020:CDS 50.0%
ACTTCCTGTTCTACGGCAGT+TGG + chr2_1:11655948-11655967 Msa0195020:CDS 50.0%
TTTGCCAACTGCCGTAGAAC+AGG - chr2_1:11655955-11655974 None:intergenic 50.0%
GCTGAGGCACAAACCTGAAA+CGG - chr2_1:11656000-11656019 None:intergenic 50.0%
! AGAGAAGGGGTGTAACTGCT+GGG - chr2_1:11656236-11656255 None:intergenic 50.0%
TTCCCACCAAATATGGGTGG+TGG + chr2_1:11656323-11656342 Msa0195020:intron 50.0%
GGGCTGGGTCATACCTTTAT+TGG + chr2_1:11656554-11656573 Msa0195020:intron 50.0%
!! GATTTGCTGGAGCCAACTCT+TGG + chr2_1:11657239-11657258 Msa0195020:CDS 50.0%
GCTGACTGAACGTGCTAGAA+AGG - chr2_1:11657276-11657295 None:intergenic 50.0%
AGACCAGTGGTTGCTTCTCT+AGG - chr2_1:11657509-11657528 None:intergenic 50.0%
CTAGGATCACGGTAACCTTG+GGG - chr2_1:11657544-11657563 None:intergenic 50.0%
!!! CCAGCAGTTTTGGCTAAAGC+AGG - chr2_1:11657731-11657750 None:intergenic 50.0%
CCTGCTTTAGCCAAAACTGC+TGG + chr2_1:11657728-11657747 Msa0195020:CDS 50.0%
GAAGTACAGTGAAGCCTGAG+TGG - chr2_1:11657917-11657936 None:intergenic 50.0%
CGAGTATCTTCCGCGACCAA+TGG - chr2_1:11651686-11651705 None:intergenic 55.0%
AGCTCCGGAGCCATGTAAGA+GGG - chr2_1:11653316-11653335 None:intergenic 55.0%
AAGCTCCGGAGCCATGTAAG+AGG - chr2_1:11653317-11653336 None:intergenic 55.0%
! CACTGGGAGACCTCCTTTTG+TGG + chr2_1:11653408-11653427 Msa0195020:five_prime_UTR 55.0%
GGTTGAGGAGGAAGAGACAC+TGG - chr2_1:11653610-11653629 None:intergenic 55.0%
! TCAGCAAACGCAGGTTGAGG+AGG - chr2_1:11653622-11653641 None:intergenic 55.0%
! GGGTTCTGGCAGAACAGTTG+AGG + chr2_1:11653804-11653823 Msa0195020:five_prime_UTR 55.0%
!! GGCGGGATTAGTCACAGATG+GGG - chr2_1:11654151-11654170 None:intergenic 55.0%
!! GAGGCGGGATTAGTCACAGA+TGG - chr2_1:11654153-11654172 None:intergenic 55.0%
GGTGCTTGCAACGCCTCAAA+AGG - chr2_1:11654426-11654445 None:intergenic 55.0%
AACGCGTAAAGCCGATGCCT+TGG - chr2_1:11654646-11654665 None:intergenic 55.0%
CAACTCACCCAATGCAGCCA+TGG - chr2_1:11654799-11654818 None:intergenic 55.0%
CCTAGAGTCTGCACTTTGGG+TGG - chr2_1:11654835-11654854 None:intergenic 55.0%
CCACCCAAAGTGCAGACTCT+AGG + chr2_1:11654832-11654851 Msa0195020:five_prime_UTR 55.0%
ACAATAGAACCGCGCATGGC+TGG + chr2_1:11654886-11654905 Msa0195020:five_prime_UTR 55.0%
CTATAGAGCGGCAGGGAAAC+TGG + chr2_1:11655301-11655320 Msa0195020:five_prime_UTR 55.0%
ATCTCCTACCGTGCTTGCAG+AGG - chr2_1:11655636-11655655 None:intergenic 55.0%
TCTGCAAGCACGGTAGGAGA+TGG + chr2_1:11655635-11655654 Msa0195020:five_prime_UTR 55.0%
!! ACTTTCAGTGGTGGACAGGC+TGG + chr2_1:11655687-11655706 Msa0195020:five_prime_UTR 55.0%
!! CTTTCAGTGGTGGACAGGCT+GGG + chr2_1:11655688-11655707 Msa0195020:five_prime_UTR 55.0%
GGACAGGCTGGGAAAAGAGA+AGG + chr2_1:11655699-11655718 Msa0195020:five_prime_UTR 55.0%
GCCTTCCTCCCATCATTTGC+TGG - chr2_1:11655813-11655832 None:intergenic 55.0%
! GAGAGAAGGGGTGTAACTGC+TGG - chr2_1:11656237-11656256 None:intergenic 55.0%
ACCTCAAGGGTGAGTGCACA+TGG + chr2_1:11656381-11656400 Msa0195020:intron 55.0%
TCCATGTGCACTCACCCTTG+AGG - chr2_1:11656385-11656404 None:intergenic 55.0%
TCGATCAAGGTCGGGTAGAG+AGG - chr2_1:11656945-11656964 None:intergenic 55.0%
! TTTGGCTTCTGCCCCTGAGA+TGG + chr2_1:11657136-11657155 Msa0195020:CDS 55.0%
GGACTGTCGCCTAAGAGAGT+TGG - chr2_1:11657329-11657348 None:intergenic 55.0%
ATCAACAGCGCCACTCACCT+CGG - chr2_1:11657354-11657373 None:intergenic 55.0%
GCTCCTAGAGAAGCAACCAC+TGG + chr2_1:11657503-11657522 Msa0195020:CDS 55.0%
CACGGTAACCTTGGGGAGAT+TGG - chr2_1:11657537-11657556 None:intergenic 55.0%
! GGCTGCCAATCCAGCAGTTT+TGG - chr2_1:11657741-11657760 None:intergenic 55.0%
TGGCAGCCTTAGAGTTGCAG+CGG + chr2_1:11657753-11657772 Msa0195020:CDS 55.0%
AGGTAGCCGCTGCAACTCTA+AGG - chr2_1:11657762-11657781 None:intergenic 55.0%
TTCCCAGGGAGAGGTGGAGT+CGG - chr2_1:11653475-11653494 None:intergenic 60.0%
CTTGGATTCCCAGGGAGAGG+TGG - chr2_1:11653481-11653500 None:intergenic 60.0%
GGACTTGGATTCCCAGGGAG+AGG - chr2_1:11653484-11653503 None:intergenic 60.0%
TTTGCAGTCAAGGAGGGGCC+TGG + chr2_1:11655231-11655250 Msa0195020:five_prime_UTR 60.0%
TTGCAGTCAAGGAGGGGCCT+GGG + chr2_1:11655232-11655251 Msa0195020:five_prime_UTR 60.0%
ACTCGTCAAACGTCCCACCC+AGG - chr2_1:11655252-11655271 None:intergenic 60.0%
GTGGCTCTCCTCTGCAAGCA+CGG + chr2_1:11655625-11655644 Msa0195020:five_prime_UTR 60.0%
CTCTCCTCTGCAAGCACGGT+AGG + chr2_1:11655629-11655648 Msa0195020:five_prime_UTR 60.0%
!! ATGATGGGAGGAAGGCGCCA+TGG + chr2_1:11655817-11655836 Msa0195020:CDS 60.0%
!! TGATGGGAGGAAGGCGCCAT+GGG + chr2_1:11655818-11655837 Msa0195020:CDS 60.0%
!! ACTTGCGGAGGCACCGTTTC+AGG + chr2_1:11655984-11656003 Msa0195020:CDS 60.0%
GCTCTGCACAGCCCAAGAGT+TGG - chr2_1:11657254-11657273 None:intergenic 60.0%
TCAACAGCGCCACTCACCTC+GGG - chr2_1:11657353-11657372 None:intergenic 60.0%
!! GTGAGGGGTGCCTTTACTCC+AGG - chr2_1:11657570-11657589 None:intergenic 60.0%
ACCCGACTCCACCTCTCCCT+GGG + chr2_1:11653470-11653489 Msa0195020:five_prime_UTR 65.0%
TCCCAGGGAGAGGTGGAGTC+GGG - chr2_1:11653474-11653493 None:intergenic 65.0%
TAGAACCGCGCATGGCTGGC+AGG + chr2_1:11654890-11654909 Msa0195020:five_prime_UTR 65.0%
GCTAACCTGCCAGCCATGCG+CGG - chr2_1:11654898-11654917 None:intergenic 65.0%
AGTCAAGGAGGGGCCTGGGT+GGG + chr2_1:11655236-11655255 Msa0195020:five_prime_UTR 65.0%
CTTAGGCGACAGTCCTCCCG+AGG + chr2_1:11657334-11657353 Msa0195020:CDS 65.0%
GACAGTCCTCCCGAGGTGAG+TGG + chr2_1:11657341-11657360 Msa0195020:CDS 65.0%
GACCCGACTCCACCTCTCCC+TGG + chr2_1:11653469-11653488 Msa0195020:five_prime_UTR 70.0%
CAGTCAAGGAGGGGCCTGGG+TGG + chr2_1:11655235-11655254 Msa0195020:five_prime_UTR 70.0%
ACAGCGCCACTCACCTCGGG+AGG - chr2_1:11657350-11657369 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 11651557 11658000 11651557 ID=Msa0195020;Name=Msa0195020
chr2_1 mRNA 11651557 11658000 11651557 ID=Msa0195020-mRNA-1;Parent=Msa0195020;Name=Msa0195020-mRNA-1;_AED=0.03;_eAED=0.03;_QI=2872|1|1|1|1|0.9|10|207|434
chr2_1 exon 11651557 11651705 11651557 ID=Msa0195020-mRNA-1:exon:5111;Parent=Msa0195020-mRNA-1
chr2_1 exon 11651790 11651879 11651790 ID=Msa0195020-mRNA-1:exon:5112;Parent=Msa0195020-mRNA-1
chr2_1 exon 11652045 11652097 11652045 ID=Msa0195020-mRNA-1:exon:5113;Parent=Msa0195020-mRNA-1
chr2_1 exon 11652422 11652497 11652422 ID=Msa0195020-mRNA-1:exon:5114;Parent=Msa0195020-mRNA-1
chr2_1 exon 11652761 11652822 11652761 ID=Msa0195020-mRNA-1:exon:5115;Parent=Msa0195020-mRNA-1
chr2_1 exon 11652911 11652989 11652911 ID=Msa0195020-mRNA-1:exon:5116;Parent=Msa0195020-mRNA-1
chr2_1 exon 11653094 11653153 11653094 ID=Msa0195020-mRNA-1:exon:5117;Parent=Msa0195020-mRNA-1
chr2_1 exon 11653289 11654911 11653289 ID=Msa0195020-mRNA-1:exon:5118;Parent=Msa0195020-mRNA-1
chr2_1 exon 11655137 11656005 11655137 ID=Msa0195020-mRNA-1:exon:5119;Parent=Msa0195020-mRNA-1
chr2_1 exon 11656678 11658000 11656678 ID=Msa0195020-mRNA-1:exon:5120;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11651557 11651705 11651557 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11651790 11651879 11651790 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11652045 11652097 11652045 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11652422 11652497 11652422 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11652761 11652822 11652761 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11652911 11652989 11652911 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11653094 11653153 11653094 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11653289 11654911 11653289 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 five_prime_UTR 11655137 11655816 11655137 ID=Msa0195020-mRNA-1:five_prime_utr;Parent=Msa0195020-mRNA-1
chr2_1 CDS 11655817 11656005 11655817 ID=Msa0195020-mRNA-1:cds;Parent=Msa0195020-mRNA-1
chr2_1 CDS 11656678 11657793 11656678 ID=Msa0195020-mRNA-1:cds;Parent=Msa0195020-mRNA-1
chr2_1 three_prime_UTR 11657794 11658000 11657794 ID=Msa0195020-mRNA-1:three_prime_utr;Parent=Msa0195020-mRNA-1
Gene Sequence

>Msa0195020

ATGATGGGAGGAAGGCGCCATGGGCATATCTCTTCGCTTACCAGTAGATCTGCTCCAAAATCCAACATTCACTTGTTTCCTGTTGTCCTTCATCTTCTTGAAAGTTCAGCTTTTAAGCACAAAGTGGCGACACTTCCTGTTCTACGGCAGTTGGCAAATCTGATTAAACTTGCGGAGGCACCGTTTCAGGGAAGAGACGACTTCCAAATAACCCTTCTTCGAATTTTAGAGTCGCTCACGGAGGAATCTTCTGTGATCCTTGCAAATCCCGACATTTTCTTACGGGAAATCCTCCCTAGTTTGACAGTTCTCTATAAGGGTAACAAGGATGGTGATGCGAGATTTTTGTGCCTTAAAATCTTTTTCGATGTTATGATTATTCTCTTGAGTGAACCAATTGAAGAAGAGCAAAGATTGAACGACTTGAAATTCGTGTCAAATACACATTTTCTTCCTCTCTACCCGACCTTGATCGAAGATGAAGACCCTATTCCTATATTTGCACAGAAGCTTCTTGTCATGCTACTGGAGTTCAGTTTTATTTCAATTCCAGACATTCTACACCTGAAGACAATTTCACAATGTTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTTTGGCTTCTGCCCCTGAGATGGAGTCCAAATTACTTTCCCAATTGAAAGTTGTTAGGAGGATCGGCAACTTCCTTGAGTTTGTATGTGCAAAGGGTATGGAAGATTTGCTGGAGCCAACTCTTGGGCTGTGCAGAGCCTTTCTAGCACGTTCAGTCAGCTGTACAAAAGGCTTCAGCTACACAACAGAGCCAACTCTCTTAGGCGACAGTCCTCCCGAGGTGAGTGGCGCTGTTGATCCGCAGCAATGCATAAGAGATATAACAGACTTTGGAAGCAATGTTGGTGTCTTTCTAGAGTTGAGTGGATCTAGAGAGACCAGTGTTGCTGATATAGCTTCTCAGTGTGTGGTTTTACTGCTTAAGGCTGCTCCTAGAGAAGCAACCACTGGTCTACTAACCAATCTCCCCAAGGTTACCGTGATCCTAGAATCCTGGAGTAAAGGCACCCCTCACTTAACAGTGCAGAGAATGCTTCATGCTTTAGGTTATGCTTGCAAGCAGTACTTATTGCATGCAATGATATTATCAATATCAATACCAGAGATTTCAAGAATTGAAGTGATAGTTACTGAACTCAAGAGTTCAAGTGTGCCTGCTTTAGCCAAAACTGCTGGATTGGCAGCCTTAGAGTTGCAGCGGCTACCTCGCTGCATTTGA
Protein sequence

>Msa0195020

MMGGRRHGHISSLTSRSAPKSNIHLFPVVLHLLESSAFKHKVATLPVLRQLANLIKLAEAPFQGRDDFQITLLRILESLTEESSVILANPDIFLREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLNDLKFVSNTHFLPLYPTLIEDEDPIPIFAQKLLVMLLEFSFISIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVCAKGMEDLLEPTLGLCRAFLARSVSCTKGFSYTTEPTLLGDSPPEVSGAVDPQQCIRDITDFGSNVGVFLELSGSRETSVADIASQCVVLLLKAAPREATTGLLTNLPKVTVILESWSKGTPHLTVQRMLHALGYACKQYLLHAMILSISIPEISRIEVIVTELKSSSVPALAKTAGLAALELQRLPRCI*