AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1223490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223490 MtrunA17_Chr4g0075071 99.266 545 3 1 1 544 1 545 0.0 1104
Msa1223490 MtrunA17_Chr3g0143671 70.818 538 157 0 7 544 7 544 0.0 791
Msa1223490 MtrunA17_Chr4g0038671 69.669 544 164 1 1 544 1 543 0.0 790
Msa1223490 MtrunA17_Chr4g0024861 73.152 514 138 0 26 539 23 536 0.0 787
Msa1223490 MtrunA17_Chr2g0322441 74.374 519 133 0 21 539 21 539 0.0 780
Msa1223490 MtrunA17_Chr1g0157341 70.205 537 157 1 11 544 7 543 0.0 768
Msa1223490 MtrunA17_Chr8g0374271 63.636 517 185 2 24 539 25 539 0.0 688
Msa1223490 MtrunA17_Chr5g0402831 64.990 517 177 2 23 539 24 536 0.0 684
Msa1223490 MtrunA17_Chr4g0024641 72.135 445 123 1 92 536 13 456 0.0 655
Msa1223490 MtrunA17_Chr4g0024641 67.500 80 26 0 459 538 875 954 2.77e-29 123
Msa1223490 MtrunA17_Chr4g0024641 67.949 78 25 0 459 536 503 580 8.61e-29 121
Msa1223490 MtrunA17_Chr4g0024641 67.949 78 25 0 459 536 565 642 8.61e-29 121
Msa1223490 MtrunA17_Chr4g0024641 67.949 78 25 0 459 536 627 704 8.61e-29 121
Msa1223490 MtrunA17_Chr4g0024641 67.949 78 25 0 459 536 689 766 8.61e-29 121
Msa1223490 MtrunA17_Chr4g0024641 67.949 78 25 0 459 536 813 890 8.61e-29 121
Msa1223490 MtrunA17_Chr4g0024641 66.667 78 26 0 459 536 751 828 9.02e-28 118
Msa1223490 MtrunA17_Chr4g0024641 66.667 78 26 0 459 536 441 518 9.35e-28 118
Msa1223490 MtrunA17_Chr8g0374261 61.240 516 197 3 22 536 21 534 0.0 653
Msa1223490 MtrunA17_Chr4g0043251 52.908 533 241 5 11 534 7 538 0.0 549
Msa1223490 MtrunA17_Chr4g0043261 50.473 529 257 4 10 534 5 532 0.0 540
Msa1223490 MtrunA17_Chr3g0121151 48.968 533 263 4 10 534 46 577 0.0 527
Msa1223490 MtrunA17_Chr3g0121161 48.780 533 264 4 10 534 46 577 0.0 525
Msa1223490 MtrunA17_Chr4g0056511 48.624 545 259 6 11 535 8 551 2.13e-174 505
Msa1223490 MtrunA17_Chr3g0079321 47.243 544 266 6 11 534 10 552 1.43e-169 493
Msa1223490 MtrunA17_Chr3g0121171 48.968 533 263 4 10 534 581 1112 1.90e-168 527
Msa1223490 MtrunA17_Chr3g0121171 48.593 533 265 4 10 534 1156 1687 5.30e-167 523
Msa1223490 MtrunA17_Chr3g0121171 50.288 521 250 4 22 534 18 537 7.45e-167 522
Msa1223490 MtrunA17_Chr3g0121171 47.092 533 264 5 10 534 1731 2253 9.14e-157 494
Msa1223490 MtrunA17_Chr7g0234061 49.338 529 248 8 27 537 26 552 2.53e-164 479
Msa1223490 MtrunA17_Chr1g0197301 47.879 330 169 3 208 534 1 330 4.50e-98 300
Msa1223490 MtrunA17_Chr4g0075781 70.673 208 18 2 134 339 1 167 6.92e-91 276
Msa1223490 MtrunA17_Chr3g0118321 26.825 589 350 17 6 537 2 566 8.21e-54 191
Msa1223490 MtrunA17_Chr8g0382691 28.147 572 327 17 24 538 28 572 5.05e-51 184
Msa1223490 MtrunA17_Chr5g0404361 30.582 533 315 17 1 493 54 571 1.90e-50 182
Msa1223490 MtrunA17_Chr5g0404341 29.630 540 315 18 1 493 5 526 2.17e-50 182
Msa1223490 MtrunA17_Chr4g0005921 27.821 514 337 12 11 493 7 517 3.55e-46 170
Msa1223490 MtrunA17_Chr5g0436461 27.726 541 344 16 30 533 24 554 2.19e-45 167
Msa1223490 MtrunA17_Chr1g0197311 39.407 236 103 4 16 212 9 243 3.40e-44 157
Msa1223490 MtrunA17_Chr3g0118331 27.289 568 326 20 30 537 25 565 2.23e-43 162
Msa1223490 MtrunA17_Chr5g0429511 26.834 518 331 14 17 493 8 518 3.18e-42 159
Msa1223490 MtrunA17_Chr3g0104061 27.309 498 321 14 30 493 26 516 2.09e-40 154
Msa1223490 MtrunA17_Chr8g0346581 26.404 534 334 14 13 493 4 531 3.19e-39 150
Msa1223490 MtrunA17_Chr5g0431581 28.571 567 346 19 11 533 9 560 3.94e-37 144
Msa1223490 MtrunA17_Chr7g0238941 27.186 526 332 16 13 493 19 538 1.37e-35 140
Msa1223490 MtrunA17_Chr3g0114211 28.395 486 296 17 51 493 54 530 1.22e-33 134
Msa1223490 MtrunA17_Chr7g0237441 25.564 532 348 13 8 493 11 540 7.76e-33 132
Msa1223490 MtrunA17_Chr7g0240991 26.731 520 306 19 33 493 28 531 8.25e-33 132
Msa1223490 MtrunA17_Chr2g0278811 25.771 551 339 14 51 533 59 607 2.44e-32 131
Msa1223490 MtrunA17_Chr5g0437681 26.248 541 329 20 7 493 3 527 3.71e-32 130
Msa1223490 MtrunA17_Chr7g0238351 25.424 531 346 14 11 493 13 541 1.49e-31 128
Msa1223490 MtrunA17_Chr7g0237491 25.681 514 326 14 30 493 33 540 3.30e-31 127
Msa1223490 MtrunA17_Chr7g0238981 25.540 509 332 12 30 493 47 553 5.46e-30 124
Msa1223490 MtrunA17_Chr4g0024651 65.823 79 27 0 26 104 23 101 6.47e-30 113
Msa1223490 MtrunA17_Chr7g0240971 25.543 552 346 18 12 513 14 550 1.37e-29 122
Msa1223490 MtrunA17_Chr4g0031901 24.704 506 335 16 30 493 44 545 3.98e-28 118
Msa1223490 MtrunA17_Chr4g0008521 25.097 518 327 13 33 498 29 537 2.49e-25 110
Msa1223490 MtrunA17_Chr3g0118351 27.893 337 205 11 234 537 6 337 9.83e-25 105
Msa1223490 MtrunA17_Chr3g0118341 41.406 128 70 5 53 177 49 174 2.75e-19 86.7
Msa1223490 MtrunA17_Chr3g0133871 28.788 198 132 5 9 199 7 202 2.00e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223490 AT4G22010.1 77.615 545 117 2 1 544 1 541 0.0 884
Msa1223490 AT1G76160.1 69.485 544 163 2 1 544 1 541 0.0 779
Msa1223490 AT1G21850.1 66.418 536 178 2 6 541 5 538 0.0 738
Msa1223490 AT1G21860.1 66.920 526 171 3 13 537 11 534 0.0 731
Msa1223490 AT1G41830.1 66.041 533 180 1 12 544 11 542 0.0 730
Msa1223490 AT4G38420.1 62.431 543 197 4 7 543 8 549 0.0 691
Msa1223490 AT5G66920.1 60.155 517 204 1 23 539 30 544 0.0 655
Msa1223490 AT4G28090.1 58.209 536 210 7 11 539 12 540 0.0 634
Msa1223490 AT2G23630.2 60.506 514 202 1 23 536 28 540 0.0 606
Msa1223490 AT2G23630.1 60.388 515 203 1 23 537 23 536 0.0 606
Msa1223490 AT4G37160.1 57.435 538 226 3 1 536 1 537 0.0 606
Msa1223490 AT4G38420.3 60.211 475 182 4 7 475 8 481 0.0 577
Msa1223490 AT3G13400.2 52.788 538 241 5 13 538 6 542 0.0 569
Msa1223490 AT3G13400.1 52.788 538 241 5 13 538 6 542 0.0 569
Msa1223490 AT1G55570.1 53.992 526 232 4 23 539 22 546 0.0 568
Msa1223490 AT1G55560.1 52.045 538 245 5 13 538 5 541 0.0 565
Msa1223490 AT3G13390.1 54.789 522 226 4 26 538 24 544 0.0 565
Msa1223490 AT4G38420.2 60.850 447 168 4 8 448 9 454 0.0 546
Msa1223490 AT4G12420.1 48.294 557 263 8 10 543 2 556 6.65e-179 517
Msa1223490 AT4G12420.2 48.294 557 263 8 10 543 2 556 6.65e-179 517
Msa1223490 AT4G37160.2 57.778 450 187 3 1 448 1 449 8.89e-177 506
Msa1223490 AT5G48450.2 49.346 535 259 8 14 537 13 546 6.69e-176 509
Msa1223490 AT5G48450.1 49.346 535 259 8 14 537 13 546 1.03e-175 510
Msa1223490 AT1G75790.1 47.778 540 266 5 13 536 5 544 1.73e-175 506
Msa1223490 AT4G25240.2 47.112 554 270 9 1 534 1 551 6.53e-168 489
Msa1223490 AT4G25240.1 47.112 554 270 9 1 534 1 551 6.53e-168 489
Msa1223490 AT5G51480.1 46.182 537 268 7 18 534 16 551 6.37e-165 481
Msa1223490 AT4G39830.1 29.242 554 329 14 6 506 12 555 4.55e-61 211
Msa1223490 AT5G21100.1 29.032 558 317 16 33 534 27 561 2.11e-57 201
Msa1223490 AT5G21105.1 27.986 586 329 19 11 534 22 576 1.33e-52 189
Msa1223490 AT5G21105.3 28.545 543 300 18 11 491 22 538 1.61e-50 182
Msa1223490 AT5G58910.2 29.026 534 326 16 2 493 5 527 2.03e-46 171
Msa1223490 AT5G58910.3 28.839 534 326 15 2 493 5 526 5.10e-45 167
Msa1223490 AT2G38080.1 26.950 564 357 17 11 533 9 558 5.31e-43 161
Msa1223490 AT2G46570.1 26.966 534 336 16 6 493 4 529 5.53e-42 159
Msa1223490 AT4G39830.3 28.510 463 269 13 96 506 6 458 1.14e-41 156
Msa1223490 AT4G39830.2 28.510 463 269 13 96 506 8 460 1.22e-41 156
Msa1223490 AT5G58910.1 29.485 485 285 15 51 493 14 483 4.92e-41 155
Msa1223490 AT5G03260.1 27.531 563 357 19 11 533 6 557 3.88e-40 153
Msa1223490 AT2G30210.1 27.985 536 322 19 9 493 8 530 8.00e-40 152
Msa1223490 AT5G01190.1 26.391 557 370 15 11 533 8 558 5.07e-39 150
Msa1223490 AT5G01190.2 26.886 517 340 14 51 533 32 544 2.52e-37 145
Msa1223490 AT5G48100.1 27.514 527 329 18 10 493 7 523 2.40e-35 140
Msa1223490 AT4G39830.4 26.998 463 263 13 96 506 8 447 3.84e-35 138
Msa1223490 AT5G05390.1 26.415 530 341 16 8 493 1 525 6.43e-35 139
Msa1223490 AT5G09360.1 26.497 551 366 17 11 527 19 564 3.15e-34 137
Msa1223490 AT5G01050.1 26.400 500 311 15 41 493 39 528 3.44e-34 137
Msa1223490 AT2G29130.1 26.628 522 307 16 30 493 30 533 2.65e-32 131
Msa1223490 AT5G01040.1 25.813 523 332 16 16 493 15 526 5.25e-32 130
Msa1223490 AT5G21105.2 29.191 346 213 9 208 534 53 385 1.75e-31 126
Msa1223490 AT1G18140.1 25.191 524 331 16 30 498 29 546 1.91e-31 129
Msa1223490 AT2G46570.2 26.726 449 279 15 87 493 4 444 7.21e-31 125
Msa1223490 AT5G07130.1 26.266 533 325 19 16 493 10 529 2.77e-29 122
Msa1223490 AT3G09220.1 26.815 496 309 17 44 493 40 527 1.56e-28 120
Msa1223490 AT5G60020.1 24.713 522 326 15 30 493 25 537 6.51e-28 118
Msa1223490 AT2G40370.1 24.811 528 343 15 17 493 16 540 8.96e-28 117
Msa1223490 AT5G60020.2 24.665 523 327 15 30 494 25 538 8.33e-27 114
Msa1223490 AT5G60020.3 24.214 541 343 15 51 533 14 545 1.13e-26 114
Msa1223490 AT5G07130.2 26.535 456 267 19 93 493 2 444 2.37e-19 91.7
Msa1223490 AT5G07130.3 26.535 456 267 19 93 493 2 444 2.37e-19 91.7
Msa1223490 AT3G09220.2 25.806 434 273 15 103 493 3 430 1.53e-17 85.9

Find 207 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACAGAATTCTCCCAATTT+TGG 0.145109 8_1:-88005678 None:intergenic
AAGGCCTTTCTAGTTTAATT+TGG 0.186143 8_1:+88006360 Msa1223490:exon
TAGGACAGCAATTCTATCTT+AGG 0.190730 8_1:+88006251 Msa1223490:CDS
TCATGGCAGGATGGAGTTTC+TGG 0.200980 8_1:+88004226 Msa1223490:CDS
CTGAACCATTCCTCATTTCT+TGG 0.201450 8_1:+88003228 Msa1223490:CDS
CATTTGGTGGCATCAGAATT+TGG 0.205860 8_1:+88004362 Msa1223490:CDS
TGGAGATTGTGTTCCAAAAT+TGG 0.270100 8_1:+88005665 Msa1223490:CDS
AACTCTGCTCCTTACATAAA+TGG 0.273052 8_1:+88005466 Msa1223490:CDS
TTCCAAGTGAAGAATCTATA+AGG 0.274131 8_1:-88002991 None:intergenic
GTACTCTTTACTAGTATTAC+TGG 0.289080 8_1:+88006648 Msa1223490:three_prime_UTR
TTAGTAATCTTTCCTTGGTT+TGG 0.303064 8_1:+88006755 Msa1223490:three_prime_UTR
ATATTCATCTCTCAATGATT+TGG 0.308278 8_1:-88006287 None:intergenic
TTACCTTACTTGCTGGTGAT+TGG 0.314955 8_1:+88004431 Msa1223490:CDS
GGAATATAAGGTCTGAGAAT+TGG 0.318069 8_1:+88006215 Msa1223490:CDS
TTGATTAATGGTCAGTTTCC+AGG 0.319677 8_1:+88003146 Msa1223490:CDS
GGCTATTCCTTCTTTGTTGT+AGG 0.333982 8_1:+88005718 Msa1223490:CDS
TTGTAGCGTCCTCTACTATT+AGG 0.340977 8_1:-88006011 None:intergenic
TTGTAGGGGATCTTGATTAA+TGG 0.345113 8_1:+88003134 Msa1223490:intron
TCTTCCAAGCCAGAACTATT+AGG 0.345262 8_1:+88005101 Msa1223490:CDS
GGGGACTTTACCTTACTTGC+TGG 0.346094 8_1:+88004424 Msa1223490:CDS
GAATATAAGGTCTGAGAATT+GGG 0.353442 8_1:+88006216 Msa1223490:CDS
ATCTATCTATACTTTGTTGT+TGG 0.355650 8_1:-88002800 None:intergenic
TGATAAGATCCTTGAGGGTT+TGG 0.356594 8_1:-88005403 None:intergenic
ACTTGGCTGTGTTGTGTTGT+GGG 0.364323 8_1:+88002762 Msa1223490:five_prime_UTR
TCCTCTTGGTGTTAAACAAC+AGG 0.365388 8_1:+88003035 Msa1223490:CDS
CAGGTAAGACATATAGATTC+AGG 0.365702 8_1:+88004774 Msa1223490:intron
GTCTTGGTCCACTTGCTGTC+AGG 0.380810 8_1:-88005381 None:intergenic
GATCCTTGAGGGTTTGGTCT+TGG 0.381811 8_1:-88005397 None:intergenic
TCAAAACAAACAGACCATTA+GGG 0.382743 8_1:-88006686 None:intergenic
GCTGACTACTTCAACATTCC+CGG 0.383892 8_1:+88005550 Msa1223490:CDS
TCCCCAGCAGGAGGAGGAAA+AGG 0.386941 8_1:-88004406 None:intergenic
CCTCAAGGATCTTATCACTA+TGG 0.389368 8_1:+88005409 Msa1223490:CDS
ATGTTGGAATGTGGAATATA+AGG 0.389557 8_1:+88006203 Msa1223490:CDS
TTGAAACTTGTAGAAGTAGA+AGG 0.392636 8_1:+88004851 Msa1223490:CDS
CTCAAAACAAACAGACCATT+AGG 0.397630 8_1:-88006687 None:intergenic
CATAAAGCTGCCGGTGCATT+TGG 0.399096 8_1:+88004346 Msa1223490:CDS
CAAGTTTCAATGAGTGTCCT+TGG 0.399894 8_1:-88004838 None:intergenic
CGCAATGCAGTGAAGAAAGT+TGG 0.400869 8_1:+88006841 Msa1223490:three_prime_UTR
CTCTGCTTGCCATTTATGTA+AGG 0.405738 8_1:-88005475 None:intergenic
GGTATCCGGTCCTGTTCCTC+CGG 0.411934 8_1:+88005051 Msa1223490:CDS
GTAGACAGAAAGTATCAATT+TGG 0.415967 8_1:+88006791 Msa1223490:three_prime_UTR
AGAGTAGGGCCCGGAGGAAC+AGG 0.417383 8_1:-88005061 None:intergenic
CGAGTGAAGAATAAGTGTTT+TGG 0.419833 8_1:-88004886 None:intergenic
GCAAGTTTCAATGGAGTGTC+TGG 0.422059 8_1:-88005529 None:intergenic
CCATTGATAAGAAGGCCATC+AGG 0.422693 8_1:-88004614 None:intergenic
GCAATGCAGTGAAGAAAGTT+GGG 0.423293 8_1:+88006842 Msa1223490:three_prime_UTR
CCTGATGGCCTTCTTATCAA+TGG 0.424286 8_1:+88004614 Msa1223490:CDS
TAGCACCCATGACAGCAGTT+TGG 0.425911 8_1:-88005627 None:intergenic
ATTGATGAAAGAACAGAAAG+TGG 0.426511 8_1:+88006727 Msa1223490:three_prime_UTR
ATTACAGCTATTCACGCATC+GGG 0.430482 8_1:+88005029 Msa1223490:CDS
TCCAAGTGAAGAATCTATAA+GGG 0.431711 8_1:-88002990 None:intergenic
ATGGATTAGTAATCTTTCCT+TGG 0.434496 8_1:+88006750 Msa1223490:three_prime_UTR
GCTATTCCTTCTTTGTTGTA+GGG 0.434843 8_1:+88005719 Msa1223490:CDS
TTCACTTGGAAAATCACATA+TGG 0.438200 8_1:+88003003 Msa1223490:CDS
GGACCAATCACCAGCAAGTA+AGG 0.439306 8_1:-88004434 None:intergenic
AGAAAACAAGCACATGTCAT+TGG 0.440968 8_1:-88006919 None:intergenic
CACAATCTTCCCTTCCCTGA+TGG 0.441737 8_1:+88004599 Msa1223490:CDS
TTCTTATCAATGGCCGTGGT+TGG 0.445035 8_1:+88004624 Msa1223490:CDS
ACAAACTGTCCGATCCCGCC+TGG 0.446453 8_1:+88004250 Msa1223490:CDS
TATGGTGACATTTATCCTCT+TGG 0.446745 8_1:+88003021 Msa1223490:CDS
TACTTCTACTTCCCATCACT+TGG 0.447740 8_1:+88004319 Msa1223490:CDS
ACCCTTATAGATTCTTCACT+TGG 0.448605 8_1:+88002989 Msa1223490:CDS
AATTACGCGGTGGCCTAGCT+TGG 0.453802 8_1:-88004455 None:intergenic
GGCATTGCCTCCGGTGGGCG+AGG 0.455157 8_1:-88005599 None:intergenic
AAGTAGTCAGCAAGTTTCAA+TGG 0.459416 8_1:-88005538 None:intergenic
ACAGCATCTATTTGAGGCCC+TGG 0.460051 8_1:-88003164 None:intergenic
GCAGGAGGAGGAAAAGGAAC+AGG 0.460869 8_1:-88004400 None:intergenic
GACTTGGCTGTGTTGTGTTG+TGG 0.461224 8_1:+88002761 Msa1223490:five_prime_UTR
AAAAGAGCACCTAATAGTTC+TGG 0.461520 8_1:-88005110 None:intergenic
TATTCACGCATCGGGGTATC+CGG 0.464030 8_1:+88005037 Msa1223490:CDS
TCACCTTGAGCTTCCACTGT+TGG 0.478763 8_1:+88006527 Msa1223490:three_prime_UTR
TACCGATCTGGTCCTTCACC+TGG 0.483857 8_1:-88004294 None:intergenic
GATTCAGGATATCAAATGTT+GGG 0.486975 8_1:+88004789 Msa1223490:CDS
TCCTTGGATTCTGAAGTTGA+TGG 0.488423 8_1:-88004822 None:intergenic
CATAGTGATAAGATCCTTGA+GGG 0.488431 8_1:-88005408 None:intergenic
AGGACAGCAATTCTATCTTA+GGG 0.489220 8_1:+88006252 Msa1223490:CDS
CTATCCAAATTAAACTAGAA+AGG 0.493830 8_1:-88006364 None:intergenic
GGAGATTGTGTTCCAAAATT+GGG 0.494521 8_1:+88005666 Msa1223490:CDS
AGCACCTAATAGTTCTGGCT+TGG 0.495008 8_1:-88005105 None:intergenic
TGATTAATGGTCAGTTTCCA+GGG 0.500271 8_1:+88003147 Msa1223490:CDS
CTACCTCCAAACTGCTGTCA+TGG 0.501545 8_1:+88005621 Msa1223490:CDS
AAGTTCTTCCCAGGCGGGAT+CGG 0.501867 8_1:-88004259 None:intergenic
GTGCAATCATGGCATATTGA+TGG 0.504564 8_1:+88005697 Msa1223490:CDS
ATCAATGGCCGTGGTTGGAA+TGG 0.506989 8_1:+88004629 Msa1223490:CDS
AAAGCTGCCGGTGCATTTGG+TGG 0.514367 8_1:+88004349 Msa1223490:CDS
TCTTCACTCGACATCCATCT+CGG 0.515244 8_1:+88004899 Msa1223490:CDS
AGCCGTGACCAGCACAGAAT+AGG 0.516026 8_1:-88004927 None:intergenic
GAGGTAGGCATTGCCTCCGG+TGG 0.516129 8_1:-88005605 None:intergenic
CGGGCAGTCCTATTCTGTGC+TGG 0.517050 8_1:+88004919 Msa1223490:CDS
GCTTTATGCATTCCAAGTGA+TGG 0.518316 8_1:-88004331 None:intergenic
TGAATAGCTGTAATGAAGAA+TGG 0.522686 8_1:-88005020 None:intergenic
TGTAGTAATCCTTGACAGGC+TGG 0.524007 8_1:-88004952 None:intergenic
AAATGCTCTTCTTTGTGGTA+GGG 0.524680 8_1:+88006321 Msa1223490:CDS
GGGAGAATTCTGTGCAATCA+TGG 0.525299 8_1:+88005686 Msa1223490:CDS
CACCCATGACAGCAGTTTGG+AGG 0.525496 8_1:-88005624 None:intergenic
ATGAAAGAACAGAAAGTGGA+TGG 0.526053 8_1:+88006731 Msa1223490:three_prime_UTR
AACCACGGCCATTGATAAGA+AGG 0.528542 8_1:-88004622 None:intergenic
ACTATGTAGTAATCCTTGAC+AGG 0.529163 8_1:-88004956 None:intergenic
AAAATGCTCTTCTTTGTGGT+AGG 0.530154 8_1:+88006320 Msa1223490:CDS
AACACATTCACTGTCGATCA+AGG 0.530984 8_1:+88004653 Msa1223490:CDS
ATAGGTTCGGTAGTGGGCAG+TGG 0.531119 8_1:+88005985 Msa1223490:intron
GTATCCGGTCCTGTTCCTCC+GGG 0.531626 8_1:+88005052 Msa1223490:CDS
AGATTCAGGATATCAAATGT+TGG 0.531672 8_1:+88004788 Msa1223490:CDS
CTTTATGCATTCCAAGTGAT+GGG 0.532402 8_1:-88004330 None:intergenic
TACCTCCAAACTGCTGTCAT+GGG 0.532714 8_1:+88005622 Msa1223490:CDS
AGCAGAGTTTGCAAGCATGA+TGG 0.536840 8_1:-88005452 None:intergenic
GTAAAGTCCCCAGCAGGAGG+AGG 0.537031 8_1:-88004412 None:intergenic
CAAAACAAACAGACCATTAG+GGG 0.538459 8_1:-88006685 None:intergenic
CTGAGACGAGTCCTCGAGAA+TGG 0.538513 8_1:+88004575 Msa1223490:CDS
GCTGGTGATTGGTCCAAGCT+AGG 0.539258 8_1:+88004442 Msa1223490:CDS
ACAGGAATGGCATACAGCAC+AGG 0.544865 8_1:+88004197 Msa1223490:intron
CATTACAGCTATTCACGCAT+CGG 0.548343 8_1:+88005028 Msa1223490:CDS
GAACTTCACTTACACTCTCC+AGG 0.548599 8_1:+88004276 Msa1223490:CDS
ACCTGTTGTTTAACACCAAG+AGG 0.550400 8_1:-88003036 None:intergenic
GGCATCTCTACCTCGCCCAC+CGG 0.550886 8_1:+88005589 Msa1223490:CDS
ACTTTCTTCACTGCATTGCG+TGG 0.551432 8_1:-88006838 None:intergenic
TTGGTAACAGCATCTATTTG+AGG 0.552001 8_1:-88003170 None:intergenic
CAGTGAAGAAAGTTGGGGAA+TGG 0.552228 8_1:+88006848 Msa1223490:three_prime_UTR
ATCTCTACCTCGCCCACCGG+AGG 0.553219 8_1:+88005592 Msa1223490:CDS
AGCTTACCCTACAACAAAGA+AGG 0.553270 8_1:-88005725 None:intergenic
TTGGAGGTAGGCATTGCCTC+CGG 0.553438 8_1:-88005608 None:intergenic
CAGAATAGGACTGCCCGAGA+TGG 0.553474 8_1:-88004913 None:intergenic
CTTCTTTGTGGTAGGGCAAG+TGG 0.555234 8_1:+88006328 Msa1223490:CDS
TATATTGCTGTCCATGACCT+TGG 0.555282 8_1:-88006166 None:intergenic
AGTTGTTGTGAGTACTCGTC+TGG 0.555875 8_1:-88004996 None:intergenic
CTTGGAATGCATAAAGCTGC+CGG 0.556676 8_1:+88004337 Msa1223490:CDS
AATTGGGAAAGGCAGTACTT+AGG 0.556676 8_1:+88006232 Msa1223490:CDS
GACAGAAAGTATCAATTTGG+TGG 0.556805 8_1:+88006794 Msa1223490:three_prime_UTR
AGTAGAAGTAGGTACCGATC+TGG 0.556820 8_1:-88004306 None:intergenic
CTTCACTCGACATCCATCTC+GGG 0.557371 8_1:+88004900 Msa1223490:CDS
CCTCCAACATAGAAAACTCC+GGG 0.558278 8_1:-88005568 None:intergenic
TCCATCAACTTCAGAATCCA+AGG 0.560394 8_1:+88004821 Msa1223490:CDS
GATAAGAAGGCCATCAGGGA+AGG 0.560561 8_1:-88004609 None:intergenic
GCCTCCAACATAGAAAACTC+CGG 0.560975 8_1:-88005569 None:intergenic
GTCCTATTCTGTGCTGGTCA+CGG 0.563217 8_1:+88004925 Msa1223490:CDS
AGGTGGAACCTGACAGCAAG+TGG 0.565680 8_1:+88005373 Msa1223490:intron
GAAATGAATAGGTTCGGTAG+TGG 0.566967 8_1:+88005978 Msa1223490:intron
GATGAGGTAACATCAAGAGT+AGG 0.568246 8_1:-88005076 None:intergenic
GGGCAAGTGGTCGTGTCACA+AGG 0.568546 8_1:+88006341 Msa1223490:CDS
TGCAGGTTTATCCAAGGTCA+TGG 0.569588 8_1:+88006155 Msa1223490:intron
CACTTACACTCTCCAGGTGA+AGG 0.573461 8_1:+88004282 Msa1223490:CDS
TCATCTCTCAATGATTTGGA+AGG 0.573950 8_1:-88006283 None:intergenic
TACATGGCTCTTGACAATGT+TGG 0.574081 8_1:+88006187 Msa1223490:CDS
ATGAGGTAACATCAAGAGTA+GGG 0.574582 8_1:-88005075 None:intergenic
TACAGCACAGGAGGAACTCA+TGG 0.575666 8_1:+88004209 Msa1223490:CDS
ACACAATCTCCACATACTCA+TGG 0.578425 8_1:-88005654 None:intergenic
CAAACTGTCCGATCCCGCCT+GGG 0.578590 8_1:+88004251 Msa1223490:CDS
AAGTGAAGTTCTTCCCAGGC+GGG 0.579134 8_1:-88004264 None:intergenic
CACGGCTAACCAGCCTGTCA+AGG 0.580362 8_1:+88004943 Msa1223490:CDS
AAATGAATAGGTTCGGTAGT+GGG 0.583969 8_1:+88005979 Msa1223490:intron
AGTAAGGTAAAGTCCCCAGC+AGG 0.584331 8_1:-88004418 None:intergenic
TGCTAATTTCCATGAGTATG+TGG 0.586755 8_1:+88005645 Msa1223490:CDS
ACATTGTTTAGTTGTAGACT+TGG 0.589818 8_1:+88002745 Msa1223490:five_prime_UTR
AAGTGATGGGAAGTAGAAGT+AGG 0.593175 8_1:-88004317 None:intergenic
AGGTAGGCATTGCCTCCGGT+GGG 0.594303 8_1:-88005604 None:intergenic
AGAAAGTATCAATTTGGTGG+TGG 0.595488 8_1:+88006797 Msa1223490:three_prime_UTR
GCAAGCATGATGGTTCGAGT+CGG 0.596671 8_1:-88005442 None:intergenic
GTGTAAGTGAAGTTCTTCCC+AGG 0.597690 8_1:-88004268 None:intergenic
TCTGATGCCACCAAATGCAC+CGG 0.597750 8_1:-88004356 None:intergenic
GGCCTTCTTATCAATGGCCG+TGG 0.598428 8_1:+88004620 Msa1223490:CDS
CATTGATAAGAAGGCCATCA+GGG 0.598899 8_1:-88004613 None:intergenic
ACAGTACGTACCAAGAAATG+AGG 0.599293 8_1:-88003238 None:intergenic
CATGACAGCAGTTTGGAGGT+AGG 0.603872 8_1:-88005620 None:intergenic
AAGGAACAGGAATGCGAGGA+CGG 0.604945 8_1:-88004387 None:intergenic
ATAAGAAGGCCATCAGGGAA+GGG 0.607188 8_1:-88004608 None:intergenic
GCACAGGAGGAACTCATGGC+AGG 0.607749 8_1:+88004213 Msa1223490:CDS
GTAACATCAAGAGTAGGGCC+CGG 0.608514 8_1:-88005070 None:intergenic
AGGAGGAACTCATGGCAGGA+TGG 0.610503 8_1:+88004217 Msa1223490:CDS
AATGCATGCAGGTTTATCCA+AGG 0.614561 8_1:+88006149 Msa1223490:intron
TTTGTCACCATCACAATGCA+CGG 0.618311 8_1:-88002588 None:intergenic
AAGGTAAAGTCCCCAGCAGG+AGG 0.622773 8_1:-88004415 None:intergenic
ATGTGTTTCCATTCCAACCA+CGG 0.627133 8_1:-88004637 None:intergenic
GGACCAAGACCAAACCCTCA+AGG 0.627977 8_1:+88005394 Msa1223490:CDS
ACGTACCAAGAAATGAGGAA+TGG 0.629004 8_1:-88003233 None:intergenic
AGACCAACAGTGGAAGCTCA+AGG 0.629831 8_1:-88006530 None:intergenic
GTCATGGACAGCAATATACA+TGG 0.630714 8_1:+88006171 Msa1223490:CDS
AGGGCCCGGAGGAACAGGAC+CGG 0.631926 8_1:-88005056 None:intergenic
CCATAGTGATAAGATCCTTG+AGG 0.636562 8_1:-88005409 None:intergenic
TGGAACGCTGAAACTACGAC+AGG 0.636901 8_1:-88002635 None:intergenic
TAAGGTCTGAGAATTGGGAA+AGG 0.643492 8_1:+88006221 Msa1223490:CDS
CTCCAGGTGAAGGACCAGAT+CGG 0.644008 8_1:+88004292 Msa1223490:CDS
GGAAAAGGAACAGGAATGCG+AGG 0.645036 8_1:-88004391 None:intergenic
CAGTGGACACCTAATAGTAG+AGG 0.646868 8_1:+88006002 Msa1223490:CDS
CTCTTGACAATGTTGGAATG+TGG 0.651900 8_1:+88006194 Msa1223490:CDS
GGAATGGCATACAGCACAGG+AGG 0.654141 8_1:+88004200 Msa1223490:intron
CAATGCAGTGAAGAAAGTTG+GGG 0.655546 8_1:+88006843 Msa1223490:three_prime_UTR
GTAACTTCCGTGCATTGTGA+TGG 0.658984 8_1:+88002581 Msa1223490:five_prime_UTR
TATATAACATGATGTCACGA+GGG 0.662837 8_1:+88006396 Msa1223490:three_prime_UTR
CTGAGTGGTACATCTAGCAA+CGG 0.667358 8_1:-88006045 None:intergenic
GAAGATTGTGACCATTCTCG+AGG 0.672337 8_1:-88004586 None:intergenic
CGTTGCTAGATGTACCACTC+AGG 0.675443 8_1:+88006046 Msa1223490:CDS
CTTACATAAATGGCAAGCAG+AGG 0.682363 8_1:+88005476 Msa1223490:CDS
GTAACAAAGCAACCAAACCA+AGG 0.688814 8_1:-88006767 None:intergenic
TAAGTGAAGTTCTTCCCAGG+CGG 0.693210 8_1:-88004265 None:intergenic
GAAACTACGACAGGTGAATG+CGG 0.693362 8_1:-88002626 None:intergenic
ATATAACATGATGTCACGAG+GGG 0.696815 8_1:+88006397 Msa1223490:three_prime_UTR
AATAACATAATAAAAGGACA+AGG 0.699136 8_1:+88002704 Msa1223490:five_prime_UTR
TCTGGCTTGGAAGACAGATG+AGG 0.703692 8_1:-88005092 None:intergenic
ATATATAACATGATGTCACG+AGG 0.703721 8_1:+88006395 Msa1223490:three_prime_UTR
ACATCAAGAGTAGGGCCCGG+AGG 0.718586 8_1:-88005067 None:intergenic
AAATGAGGAATGGTTCAGTG+AGG 0.722886 8_1:-88003223 None:intergenic
AAAACAAACAGACCATTAGG+GGG 0.724814 8_1:-88006684 None:intergenic
TTACAGCTATTCACGCATCG+GGG 0.740882 8_1:+88005030 Msa1223490:CDS
ACTGAGTGAGAGTATACACG+CGG 0.747839 8_1:+88006481 Msa1223490:three_prime_UTR
TATAACATGATGTCACGAGG+GGG 0.754935 8_1:+88006398 Msa1223490:three_prime_UTR
ACTACGACAGGTGAATGCGG+TGG 0.769733 8_1:-88002623 None:intergenic
CTGAGTGAGAGTATACACGC+GGG 0.770557 8_1:+88006482 Msa1223490:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAAATAACATAATAAA+AGG + chr8_1:88002698-88002717 Msa1223490:five_prime_UTR 10.0%
!! ATTAAACAAAATCTAATAAA+AGG + chr8_1:88003544-88003563 Msa1223490:intron 10.0%
!! TTAAACAAAATCTAATAAAA+GGG + chr8_1:88003545-88003564 Msa1223490:intron 10.0%
!!! AAAAAATATATAGATTTGCT+TGG - chr8_1:88003367-88003386 None:intergenic 15.0%
!!! GCAATTTTTTTTTCTTATTT+AGG + chr8_1:88003433-88003452 Msa1223490:intron 15.0%
!!! TTTTCTTATTTAGGATATAA+AGG + chr8_1:88003442-88003461 Msa1223490:intron 15.0%
!! TAAACAAAATCTAATAAAAG+GGG + chr8_1:88003546-88003565 Msa1223490:intron 15.0%
!! TAATTAAAGTAAAAAGCAAT+TGG - chr8_1:88003642-88003661 None:intergenic 15.0%
!!! ATTAATATTTCTACTATGAT+GGG + chr8_1:88003717-88003736 Msa1223490:intron 15.0%
!!! TGGAATTTTTTATTCAATAT+TGG - chr8_1:88006902-88006921 None:intergenic 15.0%
!! AATAACATAATAAAAGGACA+AGG + chr8_1:88002704-88002723 Msa1223490:five_prime_UTR 20.0%
!! AATAGTACAAGTTACAAAAA+CGG + chr8_1:88002854-88002873 Msa1223490:five_prime_UTR 20.0%
!!! TTTAGGATATAAAGGATTAA+AGG + chr8_1:88003450-88003469 Msa1223490:intron 20.0%
!! AAACAAAATCTAATAAAAGG+GGG + chr8_1:88003547-88003566 Msa1223490:intron 20.0%
!!! TTGCTTTTTACTTTAATTAC+AGG + chr8_1:88003643-88003662 Msa1223490:intron 20.0%
!!! GATTAATATTTCTACTATGA+TGG + chr8_1:88003716-88003735 Msa1223490:intron 20.0%
!!! ATTTTTTAATTTGCACAACA+TGG + chr8_1:88003937-88003956 Msa1223490:intron 20.0%
!!! ATAAACAAAGCATTGAAATT+AGG - chr8_1:88004000-88004019 None:intergenic 20.0%
!!! AGTAAATTATGTTAGTTTGT+TGG + chr8_1:88004147-88004166 Msa1223490:intron 20.0%
! TTCCATTAACGCAAAAATTA+TGG + chr8_1:88002653-88002672 Msa1223490:five_prime_UTR 25.0%
!! ATCTATCTATACTTTGTTGT+TGG - chr8_1:88002803-88002822 None:intergenic 25.0%
!! TTCTTTCTTTTTGTGTTGTA+GGG + chr8_1:88003119-88003138 Msa1223490:intron 25.0%
!! ACTGATAATCAAGTTTTCAT+TGG - chr8_1:88003192-88003211 None:intergenic 25.0%
! AAAAAATGCCAGATTTACTA+TGG + chr8_1:88003301-88003320 Msa1223490:intron 25.0%
! CTTGGTAGAAAAAACTAAAA+AGG - chr8_1:88003349-88003368 None:intergenic 25.0%
!! GACTTCATTCTTTCTTTTAA+AGG + chr8_1:88003409-88003428 Msa1223490:intron 25.0%
! CATAGCATAAATTGACATAT+TGG + chr8_1:88003489-88003508 Msa1223490:intron 25.0%
!! ACATATTGGATTTAGTTCAT+TGG + chr8_1:88003503-88003522 Msa1223490:intron 25.0%
!! CATATTGGATTTAGTTCATT+GGG + chr8_1:88003504-88003523 Msa1223490:intron 25.0%
! ATCTTGCAAATTGCAATAAA+TGG + chr8_1:88003570-88003589 Msa1223490:intron 25.0%
!!! AGGTTAGACTCATTTTTAAA+CGG + chr8_1:88003663-88003682 Msa1223490:intron 25.0%
! AATCAATGTATAACTGAGAA+TGG - chr8_1:88003700-88003719 None:intergenic 25.0%
!! TTGACACTTTGTTTACAAAA+GGG - chr8_1:88004057-88004076 None:intergenic 25.0%
!! TTTGACACTTTGTTTACAAA+AGG - chr8_1:88004058-88004077 None:intergenic 25.0%
!! TTTGTAAACAAAGTGTCAAA+AGG + chr8_1:88004058-88004077 Msa1223490:intron 25.0%
!! TTGTAAACAAAGTGTCAAAA+GGG + chr8_1:88004059-88004078 Msa1223490:intron 25.0%
!!! GTTAGTTTGTTGGAATTTTA+TGG + chr8_1:88004157-88004176 Msa1223490:intron 25.0%
! ATGCAAAGAATTTAATTACG+CGG - chr8_1:88004471-88004490 None:intergenic 25.0%
!!! TAAGTAATGAGTATTGAGAA+AGG - chr8_1:88004536-88004555 None:intergenic 25.0%
! TTGTATCAAGATTAAAGTGT+TGG - chr8_1:88005781-88005800 None:intergenic 25.0%
! GATCTAACGATTATGATTTA+CGG + chr8_1:88005868-88005887 Msa1223490:intron 25.0%
!!! AATACTTTTTTATACCTGAG+TGG - chr8_1:88006063-88006082 None:intergenic 25.0%
! ATATTCATCTCTCAATGATT+TGG - chr8_1:88006290-88006309 None:intergenic 25.0%
! CTATCCAAATTAAACTAGAA+AGG - chr8_1:88006367-88006386 None:intergenic 25.0%
! GTCCATAATTTTTGCGTTAA+TGG - chr8_1:88002658-88002677 None:intergenic 30.0%
ACATTGTTTAGTTGTAGACT+TGG + chr8_1:88002745-88002764 Msa1223490:five_prime_UTR 30.0%
TCCAAGTGAAGAATCTATAA+GGG - chr8_1:88002993-88003012 None:intergenic 30.0%
TTCCAAGTGAAGAATCTATA+AGG - chr8_1:88002994-88003013 None:intergenic 30.0%
TTCACTTGGAAAATCACATA+TGG + chr8_1:88003003-88003022 Msa1223490:CDS 30.0%
! GTTCTTTCTTTTTGTGTTGT+AGG + chr8_1:88003118-88003137 Msa1223490:intron 30.0%
! TCTTTCTTTTTGTGTTGTAG+GGG + chr8_1:88003120-88003139 Msa1223490:intron 30.0%
CATAGATTCCATAGTAAATC+TGG - chr8_1:88003312-88003331 None:intergenic 30.0%
! CTTTTCTCTGTTGTCTTTTT+GGG + chr8_1:88003608-88003627 Msa1223490:intron 30.0%
! CATTTTTAAACGGAGATGTA+TGG + chr8_1:88003673-88003692 Msa1223490:intron 30.0%
!! ATATTTCTACTATGATGGGT+TGG + chr8_1:88003721-88003740 Msa1223490:intron 30.0%
!! TATTTCTACTATGATGGGTT+GGG + chr8_1:88003722-88003741 Msa1223490:intron 30.0%
TGCAGTAAAATTTATTGCTG+TGG + chr8_1:88003863-88003882 Msa1223490:intron 30.0%
! TGTAAACAAAGTGTCAAAAG+GGG + chr8_1:88004060-88004079 Msa1223490:intron 30.0%
TAAACTAGATCATTCACCTA+AGG - chr8_1:88004114-88004133 None:intergenic 30.0%
GTTTCAAACATTTCTTCTAC+AGG + chr8_1:88004179-88004198 Msa1223490:intron 30.0%
AAACATTTCTTCTACAGGAA+TGG + chr8_1:88004184-88004203 Msa1223490:intron 30.0%
TGTTTAAATGTTGAATCTGC+AGG + chr8_1:88004755-88004774 Msa1223490:intron 30.0%
AGATTCAGGATATCAAATGT+TGG + chr8_1:88004788-88004807 Msa1223490:CDS 30.0%
GATTCAGGATATCAAATGTT+GGG + chr8_1:88004789-88004808 Msa1223490:CDS 30.0%
TTGAAACTTGTAGAAGTAGA+AGG + chr8_1:88004851-88004870 Msa1223490:CDS 30.0%
!! TGAAGAATAAGTGTTTTGGA+GGG - chr8_1:88004885-88004904 None:intergenic 30.0%
TGAATAGCTGTAATGAAGAA+TGG - chr8_1:88005023-88005042 None:intergenic 30.0%
AATAAGCTCCAACAAGAAAA+GGG - chr8_1:88005150-88005169 None:intergenic 30.0%
AAATAAGCTCCAACAAGAAA+AGG - chr8_1:88005151-88005170 None:intergenic 30.0%
TGTGAGAAACATATCTTTCT+TGG - chr8_1:88005273-88005292 None:intergenic 30.0%
TCATTTCACAAAGTTGTGTT+AGG - chr8_1:88005965-88005984 None:intergenic 30.0%
CACAACTTTGTGAAATGAAT+AGG + chr8_1:88005967-88005986 Msa1223490:intron 30.0%
CTTTGTGAAATGAATAGGTT+CGG + chr8_1:88005972-88005991 Msa1223490:intron 30.0%
ATGTTGGAATGTGGAATATA+AGG + chr8_1:88006203-88006222 Msa1223490:CDS 30.0%
GAATATAAGGTCTGAGAATT+GGG + chr8_1:88006216-88006235 Msa1223490:CDS 30.0%
!!! CACAAAGAAGAGCATTTTTT+GGG - chr8_1:88006318-88006337 None:intergenic 30.0%
!! AAGGCCTTTCTAGTTTAATT+TGG + chr8_1:88006360-88006379 Msa1223490:exon 30.0%
ATATATAACATGATGTCACG+AGG + chr8_1:88006395-88006414 Msa1223490:three_prime_UTR 30.0%
TATATAACATGATGTCACGA+GGG + chr8_1:88006396-88006415 Msa1223490:three_prime_UTR 30.0%
AAAAAAAATGAGACCAACAG+TGG - chr8_1:88006543-88006562 None:intergenic 30.0%
GTACTCTTTACTAGTATTAC+TGG + chr8_1:88006648-88006667 Msa1223490:three_prime_UTR 30.0%
TCAAAACAAACAGACCATTA+GGG - chr8_1:88006689-88006708 None:intergenic 30.0%
!!! TTGTTTTGAGTGATTGTGTA+AGG + chr8_1:88006700-88006719 Msa1223490:three_prime_UTR 30.0%
ATTGATGAAAGAACAGAAAG+TGG + chr8_1:88006727-88006746 Msa1223490:three_prime_UTR 30.0%
!! ATGGATTAGTAATCTTTCCT+TGG + chr8_1:88006750-88006769 Msa1223490:three_prime_UTR 30.0%
TTAGTAATCTTTCCTTGGTT+TGG + chr8_1:88006755-88006774 Msa1223490:three_prime_UTR 30.0%
!! GTAGACAGAAAGTATCAATT+TGG + chr8_1:88006791-88006810 Msa1223490:three_prime_UTR 30.0%
ACCCTTATAGATTCTTCACT+TGG + chr8_1:88002989-88003008 Msa1223490:CDS 35.0%
TATGGTGACATTTATCCTCT+TGG + chr8_1:88003021-88003040 Msa1223490:CDS 35.0%
TTGTAGGGGATCTTGATTAA+TGG + chr8_1:88003134-88003153 Msa1223490:intron 35.0%
TTGATTAATGGTCAGTTTCC+AGG + chr8_1:88003146-88003165 Msa1223490:CDS 35.0%
TGATTAATGGTCAGTTTCCA+GGG + chr8_1:88003147-88003166 Msa1223490:CDS 35.0%
! TTGGTAACAGCATCTATTTG+AGG - chr8_1:88003173-88003192 None:intergenic 35.0%
! ATTGGATTTAGTTCATTGGG+TGG + chr8_1:88003507-88003526 Msa1223490:intron 35.0%
! GCTTTTCTCTGTTGTCTTTT+TGG + chr8_1:88003607-88003626 Msa1223490:intron 35.0%
TCTATAGCACTGCATAGTAA+TGG - chr8_1:88003805-88003824 None:intergenic 35.0%
TCCATAAATCACATATGAGC+TGG + chr8_1:88003903-88003922 Msa1223490:intron 35.0%
ACCAGCTCATATGTGATTTA+TGG - chr8_1:88003907-88003926 None:intergenic 35.0%
CTTTATGCATTCCAAGTGAT+GGG - chr8_1:88004333-88004352 None:intergenic 35.0%
CAAAGAATTTAATTACGCGG+TGG - chr8_1:88004468-88004487 None:intergenic 35.0%
AGAAAGGATTTAAGAGACAC+TGG - chr8_1:88004520-88004539 None:intergenic 35.0%
!! TCAGTCTCTAAAACATCAGA+GGG - chr8_1:88004559-88004578 None:intergenic 35.0%
CAGGTAAGACATATAGATTC+AGG + chr8_1:88004774-88004793 Msa1223490:intron 35.0%
!! GTGAAGAATAAGTGTTTTGG+AGG - chr8_1:88004886-88004905 None:intergenic 35.0%
! CGAGTGAAGAATAAGTGTTT+TGG - chr8_1:88004889-88004908 None:intergenic 35.0%
ACTATGTAGTAATCCTTGAC+AGG - chr8_1:88004959-88004978 None:intergenic 35.0%
ATGAGGTAACATCAAGAGTA+GGG - chr8_1:88005078-88005097 None:intergenic 35.0%
!! AAAAGAGCACCTAATAGTTC+TGG - chr8_1:88005113-88005132 None:intergenic 35.0%
AACAAGAAAAGGGGCAATAA+GGG - chr8_1:88005140-88005159 None:intergenic 35.0%
ATAAGCTCCAACAAGAAAAG+GGG - chr8_1:88005149-88005168 None:intergenic 35.0%
! AACCACTTTCTTTTTACTCG+AGG - chr8_1:88005300-88005319 None:intergenic 35.0%
CATAGTGATAAGATCCTTGA+GGG - chr8_1:88005411-88005430 None:intergenic 35.0%
AACTCTGCTCCTTACATAAA+TGG + chr8_1:88005466-88005485 Msa1223490:CDS 35.0%
AAGTAGTCAGCAAGTTTCAA+TGG - chr8_1:88005541-88005560 None:intergenic 35.0%
TGCTAATTTCCATGAGTATG+TGG + chr8_1:88005645-88005664 Msa1223490:CDS 35.0%
TGGAGATTGTGTTCCAAAAT+TGG + chr8_1:88005665-88005684 Msa1223490:CDS 35.0%
GGAGATTGTGTTCCAAAATT+GGG + chr8_1:88005666-88005685 Msa1223490:CDS 35.0%
! GCTATTCCTTCTTTGTTGTA+GGG + chr8_1:88005719-88005738 Msa1223490:CDS 35.0%
! AAATGAATAGGTTCGGTAGT+GGG + chr8_1:88005979-88005998 Msa1223490:intron 35.0%
ATTCGTAATTGAATGCATGC+AGG + chr8_1:88006138-88006157 Msa1223490:intron 35.0%
GGAATATAAGGTCTGAGAAT+TGG + chr8_1:88006215-88006234 Msa1223490:CDS 35.0%
TAGGACAGCAATTCTATCTT+AGG + chr8_1:88006251-88006270 Msa1223490:CDS 35.0%
AGGACAGCAATTCTATCTTA+GGG + chr8_1:88006252-88006271 Msa1223490:CDS 35.0%
! TCATCTCTCAATGATTTGGA+AGG - chr8_1:88006286-88006305 None:intergenic 35.0%
!!! CCACAAAGAAGAGCATTTTT+TGG - chr8_1:88006319-88006338 None:intergenic 35.0%
CCAAAAAATGCTCTTCTTTG+TGG + chr8_1:88006316-88006335 Msa1223490:CDS 35.0%
AAAATGCTCTTCTTTGTGGT+AGG + chr8_1:88006320-88006339 Msa1223490:CDS 35.0%
AAATGCTCTTCTTTGTGGTA+GGG + chr8_1:88006321-88006340 Msa1223490:CDS 35.0%
ATATAACATGATGTCACGAG+GGG + chr8_1:88006397-88006416 Msa1223490:three_prime_UTR 35.0%
AAAACAAACAGACCATTAGG+GGG - chr8_1:88006687-88006706 None:intergenic 35.0%
CAAAACAAACAGACCATTAG+GGG - chr8_1:88006688-88006707 None:intergenic 35.0%
CTCAAAACAAACAGACCATT+AGG - chr8_1:88006690-88006709 None:intergenic 35.0%
ATGAAAGAACAGAAAGTGGA+TGG + chr8_1:88006731-88006750 Msa1223490:three_prime_UTR 35.0%
!! GACAGAAAGTATCAATTTGG+TGG + chr8_1:88006794-88006813 Msa1223490:three_prime_UTR 35.0%
!! AGAAAGTATCAATTTGGTGG+TGG + chr8_1:88006797-88006816 Msa1223490:three_prime_UTR 35.0%
AGAAAACAAGCACATGTCAT+TGG - chr8_1:88006922-88006941 None:intergenic 35.0%
TTTGTCACCATCACAATGCA+CGG - chr8_1:88002591-88002610 None:intergenic 40.0%
!! TCCTCTTGGTGTTAAACAAC+AGG + chr8_1:88003035-88003054 Msa1223490:CDS 40.0%
! ACCTGTTGTTTAACACCAAG+AGG - chr8_1:88003039-88003058 None:intergenic 40.0%
AAATGAGGAATGGTTCAGTG+AGG - chr8_1:88003226-88003245 None:intergenic 40.0%
CTGAACCATTCCTCATTTCT+TGG + chr8_1:88003228-88003247 Msa1223490:CDS 40.0%
ACGTACCAAGAAATGAGGAA+TGG - chr8_1:88003236-88003255 None:intergenic 40.0%
ACAGTACGTACCAAGAAATG+AGG - chr8_1:88003241-88003260 None:intergenic 40.0%
!! AGCACTGCATAGTAATGGAT+TGG - chr8_1:88003800-88003819 None:intergenic 40.0%
AACACATACAGTCTGTTAGC+TGG - chr8_1:88003832-88003851 None:intergenic 40.0%
! GCTTTGGATTTACAAGCCTT+AGG + chr8_1:88004095-88004114 Msa1223490:intron 40.0%
! AAGTGATGGGAAGTAGAAGT+AGG - chr8_1:88004320-88004339 None:intergenic 40.0%
TACTTCTACTTCCCATCACT+TGG + chr8_1:88004319-88004338 Msa1223490:CDS 40.0%
GCTTTATGCATTCCAAGTGA+TGG - chr8_1:88004334-88004353 None:intergenic 40.0%
! CATTTGGTGGCATCAGAATT+TGG + chr8_1:88004362-88004381 Msa1223490:CDS 40.0%
! TTACCTTACTTGCTGGTGAT+TGG + chr8_1:88004431-88004450 Msa1223490:CDS 40.0%
!! CTCAGTCTCTAAAACATCAG+AGG - chr8_1:88004560-88004579 None:intergenic 40.0%
CATTGATAAGAAGGCCATCA+GGG - chr8_1:88004616-88004635 None:intergenic 40.0%
ATGTGTTTCCATTCCAACCA+CGG - chr8_1:88004640-88004659 None:intergenic 40.0%
AACACATTCACTGTCGATCA+AGG + chr8_1:88004653-88004672 Msa1223490:CDS 40.0%
TCCATCAACTTCAGAATCCA+AGG + chr8_1:88004821-88004840 Msa1223490:CDS 40.0%
!! TCCTTGGATTCTGAAGTTGA+TGG - chr8_1:88004825-88004844 None:intergenic 40.0%
CAAGTTTCAATGAGTGTCCT+TGG - chr8_1:88004841-88004860 None:intergenic 40.0%
CATTACAGCTATTCACGCAT+CGG + chr8_1:88005028-88005047 Msa1223490:CDS 40.0%
ATTACAGCTATTCACGCATC+GGG + chr8_1:88005029-88005048 Msa1223490:CDS 40.0%
GATGAGGTAACATCAAGAGT+AGG - chr8_1:88005079-88005098 None:intergenic 40.0%
TCTTCCAAGCCAGAACTATT+AGG + chr8_1:88005101-88005120 Msa1223490:CDS 40.0%
CAACAAGAAAAGGGGCAATA+AGG - chr8_1:88005141-88005160 None:intergenic 40.0%
! CTTATTGCCCCTTTTCTTGT+TGG + chr8_1:88005139-88005158 Msa1223490:intron 40.0%
GTCCTCGAGTAAAAAGAAAG+TGG + chr8_1:88005295-88005314 Msa1223490:intron 40.0%
TGATAAGATCCTTGAGGGTT+TGG - chr8_1:88005406-88005425 None:intergenic 40.0%
CCATAGTGATAAGATCCTTG+AGG - chr8_1:88005412-88005431 None:intergenic 40.0%
CCTCAAGGATCTTATCACTA+TGG + chr8_1:88005409-88005428 Msa1223490:CDS 40.0%
! CTCTGCTTGCCATTTATGTA+AGG - chr8_1:88005478-88005497 None:intergenic 40.0%
CTTACATAAATGGCAAGCAG+AGG + chr8_1:88005476-88005495 Msa1223490:CDS 40.0%
! ATTCCCGGAGTTTTCTATGT+TGG + chr8_1:88005565-88005584 Msa1223490:CDS 40.0%
ACACAATCTCCACATACTCA+TGG - chr8_1:88005657-88005676 None:intergenic 40.0%
! GCACAGAATTCTCCCAATTT+TGG - chr8_1:88005681-88005700 None:intergenic 40.0%
GTGCAATCATGGCATATTGA+TGG + chr8_1:88005697-88005716 Msa1223490:CDS 40.0%
! GGCTATTCCTTCTTTGTTGT+AGG + chr8_1:88005718-88005737 Msa1223490:CDS 40.0%
AGCTTACCCTACAACAAAGA+AGG - chr8_1:88005728-88005747 None:intergenic 40.0%
! GAAATGAATAGGTTCGGTAG+TGG + chr8_1:88005978-88005997 Msa1223490:intron 40.0%
TTGTAGCGTCCTCTACTATT+AGG - chr8_1:88006014-88006033 None:intergenic 40.0%
AATGCATGCAGGTTTATCCA+AGG + chr8_1:88006149-88006168 Msa1223490:intron 40.0%
TATATTGCTGTCCATGACCT+TGG - chr8_1:88006169-88006188 None:intergenic 40.0%
GTCATGGACAGCAATATACA+TGG + chr8_1:88006171-88006190 Msa1223490:CDS 40.0%
TACATGGCTCTTGACAATGT+TGG + chr8_1:88006187-88006206 Msa1223490:CDS 40.0%
CTCTTGACAATGTTGGAATG+TGG + chr8_1:88006194-88006213 Msa1223490:CDS 40.0%
TAAGGTCTGAGAATTGGGAA+AGG + chr8_1:88006221-88006240 Msa1223490:CDS 40.0%
AATTGGGAAAGGCAGTACTT+AGG + chr8_1:88006232-88006251 Msa1223490:CDS 40.0%
!!! AGAAGAGCATTTTTTGGGAC+TGG - chr8_1:88006313-88006332 None:intergenic 40.0%
TATAACATGATGTCACGAGG+GGG + chr8_1:88006398-88006417 Msa1223490:three_prime_UTR 40.0%
GTAACAAAGCAACCAAACCA+AGG - chr8_1:88006770-88006789 None:intergenic 40.0%
!!! CGTGGAAAGTTTTAGAACGT+GGG - chr8_1:88006823-88006842 None:intergenic 40.0%
GCAATGCAGTGAAGAAAGTT+GGG + chr8_1:88006842-88006861 Msa1223490:three_prime_UTR 40.0%
CAATGCAGTGAAGAAAGTTG+GGG + chr8_1:88006843-88006862 Msa1223490:three_prime_UTR 40.0%
GTAACTTCCGTGCATTGTGA+TGG + chr8_1:88002581-88002600 Msa1223490:five_prime_UTR 45.0%
GAAACTACGACAGGTGAATG+CGG - chr8_1:88002629-88002648 None:intergenic 45.0%
ACTTGGCTGTGTTGTGTTGT+GGG + chr8_1:88002762-88002781 Msa1223490:five_prime_UTR 45.0%
AGTTCATTGGGTGGTTAGTG+TGG + chr8_1:88003516-88003535 Msa1223490:intron 45.0%
!! GGGGAAGCTTGTTAATGCTT+TGG + chr8_1:88004079-88004098 Msa1223490:intron 45.0%
TAAGTGAAGTTCTTCCCAGG+CGG - chr8_1:88004268-88004287 None:intergenic 45.0%
GTGTAAGTGAAGTTCTTCCC+AGG - chr8_1:88004271-88004290 None:intergenic 45.0%
GAACTTCACTTACACTCTCC+AGG + chr8_1:88004276-88004295 Msa1223490:CDS 45.0%
!! AGTAGAAGTAGGTACCGATC+TGG - chr8_1:88004309-88004328 None:intergenic 45.0%
CTTGGAATGCATAAAGCTGC+CGG + chr8_1:88004337-88004356 Msa1223490:CDS 45.0%
GAAGATTGTGACCATTCTCG+AGG - chr8_1:88004589-88004608 None:intergenic 45.0%
ATAAGAAGGCCATCAGGGAA+GGG - chr8_1:88004611-88004630 None:intergenic 45.0%
CCATTGATAAGAAGGCCATC+AGG - chr8_1:88004617-88004636 None:intergenic 45.0%
CCTGATGGCCTTCTTATCAA+TGG + chr8_1:88004614-88004633 Msa1223490:CDS 45.0%
AACCACGGCCATTGATAAGA+AGG - chr8_1:88004625-88004644 None:intergenic 45.0%
TTCTTATCAATGGCCGTGGT+TGG + chr8_1:88004624-88004643 Msa1223490:CDS 45.0%
CATTCACTGTCGATCAAGGT+TGG + chr8_1:88004657-88004676 Msa1223490:intron 45.0%
TCTTCACTCGACATCCATCT+CGG + chr8_1:88004899-88004918 Msa1223490:CDS 45.0%
TGTAGTAATCCTTGACAGGC+TGG - chr8_1:88004955-88004974 None:intergenic 45.0%
AGTTGTTGTGAGTACTCGTC+TGG - chr8_1:88004999-88005018 None:intergenic 45.0%
TTACAGCTATTCACGCATCG+GGG + chr8_1:88005030-88005049 Msa1223490:CDS 45.0%
!! AGCACCTAATAGTTCTGGCT+TGG - chr8_1:88005108-88005127 None:intergenic 45.0%
AGCAGAGTTTGCAAGCATGA+TGG - chr8_1:88005455-88005474 None:intergenic 45.0%
! GCAAGTTTCAATGGAGTGTC+TGG - chr8_1:88005532-88005551 None:intergenic 45.0%
GCTGACTACTTCAACATTCC+CGG + chr8_1:88005550-88005569 Msa1223490:CDS 45.0%
CCTCCAACATAGAAAACTCC+GGG - chr8_1:88005571-88005590 None:intergenic 45.0%
GCCTCCAACATAGAAAACTC+CGG - chr8_1:88005572-88005591 None:intergenic 45.0%
TACCTCCAAACTGCTGTCAT+GGG + chr8_1:88005622-88005641 Msa1223490:CDS 45.0%
GGGAGAATTCTGTGCAATCA+TGG + chr8_1:88005686-88005705 Msa1223490:CDS 45.0%
CAGTGGACACCTAATAGTAG+AGG + chr8_1:88006002-88006021 Msa1223490:CDS 45.0%
CTGAGTGGTACATCTAGCAA+CGG - chr8_1:88006048-88006067 None:intergenic 45.0%
TGCAGGTTTATCCAAGGTCA+TGG + chr8_1:88006155-88006174 Msa1223490:intron 45.0%
! ACTGAGTGAGAGTATACACG+CGG + chr8_1:88006481-88006500 Msa1223490:three_prime_UTR 45.0%
!!! GCGTGGAAAGTTTTAGAACG+TGG - chr8_1:88006824-88006843 None:intergenic 45.0%
ACTTTCTTCACTGCATTGCG+TGG - chr8_1:88006841-88006860 None:intergenic 45.0%
CGCAATGCAGTGAAGAAAGT+TGG + chr8_1:88006841-88006860 Msa1223490:three_prime_UTR 45.0%
CAGTGAAGAAAGTTGGGGAA+TGG + chr8_1:88006848-88006867 Msa1223490:three_prime_UTR 45.0%
TGGAACGCTGAAACTACGAC+AGG - chr8_1:88002638-88002657 None:intergenic 50.0%
GACTTGGCTGTGTTGTGTTG+TGG + chr8_1:88002761-88002780 Msa1223490:five_prime_UTR 50.0%
! ACAGCATCTATTTGAGGCCC+TGG - chr8_1:88003167-88003186 None:intergenic 50.0%
ACAGGAATGGCATACAGCAC+AGG + chr8_1:88004197-88004216 Msa1223490:intron 50.0%
TACAGCACAGGAGGAACTCA+TGG + chr8_1:88004209-88004228 Msa1223490:CDS 50.0%
TCATGGCAGGATGGAGTTTC+TGG + chr8_1:88004226-88004245 Msa1223490:CDS 50.0%
AAGTGAAGTTCTTCCCAGGC+GGG - chr8_1:88004267-88004286 None:intergenic 50.0%
CACTTACACTCTCCAGGTGA+AGG + chr8_1:88004282-88004301 Msa1223490:CDS 50.0%
CATAAAGCTGCCGGTGCATT+TGG + chr8_1:88004346-88004365 Msa1223490:CDS 50.0%
TCTGATGCCACCAAATGCAC+CGG - chr8_1:88004359-88004378 None:intergenic 50.0%
AAGGAACAGGAATGCGAGGA+CGG - chr8_1:88004390-88004409 None:intergenic 50.0%
GGAAAAGGAACAGGAATGCG+AGG - chr8_1:88004394-88004413 None:intergenic 50.0%
! TTCCTTTTCCTCCTCCTGCT+GGG + chr8_1:88004404-88004423 Msa1223490:CDS 50.0%
AGTAAGGTAAAGTCCCCAGC+AGG - chr8_1:88004421-88004440 None:intergenic 50.0%
GGGGACTTTACCTTACTTGC+TGG + chr8_1:88004424-88004443 Msa1223490:CDS 50.0%
GGACCAATCACCAGCAAGTA+AGG - chr8_1:88004437-88004456 None:intergenic 50.0%
CACAATCTTCCCTTCCCTGA+TGG + chr8_1:88004599-88004618 Msa1223490:CDS 50.0%
GATAAGAAGGCCATCAGGGA+AGG - chr8_1:88004612-88004631 None:intergenic 50.0%
ATCAATGGCCGTGGTTGGAA+TGG + chr8_1:88004629-88004648 Msa1223490:CDS 50.0%
CTTCACTCGACATCCATCTC+GGG + chr8_1:88004900-88004919 Msa1223490:CDS 50.0%
! GTCCTATTCTGTGCTGGTCA+CGG + chr8_1:88004925-88004944 Msa1223490:CDS 50.0%
! TATTCACGCATCGGGGTATC+CGG + chr8_1:88005037-88005056 Msa1223490:CDS 50.0%
GTAACATCAAGAGTAGGGCC+CGG - chr8_1:88005073-88005092 None:intergenic 50.0%
!! TCTGGCTTGGAAGACAGATG+AGG - chr8_1:88005095-88005114 None:intergenic 50.0%
! GTGTTACTGCTCCTGAAACC+AGG + chr8_1:88005353-88005372 Msa1223490:intron 50.0%
TTACTGCTCCTGAAACCAGG+TGG + chr8_1:88005356-88005375 Msa1223490:intron 50.0%
! GATCCTTGAGGGTTTGGTCT+TGG - chr8_1:88005400-88005419 None:intergenic 50.0%
GCAAGCATGATGGTTCGAGT+CGG - chr8_1:88005445-88005464 None:intergenic 50.0%
! CCCGGAGTTTTCTATGTTGG+AGG + chr8_1:88005568-88005587 Msa1223490:CDS 50.0%
CATGACAGCAGTTTGGAGGT+AGG - chr8_1:88005623-88005642 None:intergenic 50.0%
CTACCTCCAAACTGCTGTCA+TGG + chr8_1:88005621-88005640 Msa1223490:CDS 50.0%
TAGCACCCATGACAGCAGTT+TGG - chr8_1:88005630-88005649 None:intergenic 50.0%
CGTTGCTAGATGTACCACTC+AGG + chr8_1:88006046-88006065 Msa1223490:CDS 50.0%
CTTCTTTGTGGTAGGGCAAG+TGG + chr8_1:88006328-88006347 Msa1223490:CDS 50.0%
! CTGAGTGAGAGTATACACGC+GGG + chr8_1:88006482-88006501 Msa1223490:three_prime_UTR 50.0%
TCACCTTGAGCTTCCACTGT+TGG + chr8_1:88006527-88006546 Msa1223490:three_prime_UTR 50.0%
AGACCAACAGTGGAAGCTCA+AGG - chr8_1:88006533-88006552 None:intergenic 50.0%
ATGTAACCCATGCCCCCTAA+TGG + chr8_1:88006672-88006691 Msa1223490:three_prime_UTR 50.0%
! AACAGACCATTAGGGGGCAT+GGG - chr8_1:88006681-88006700 None:intergenic 50.0%
AAACAGACCATTAGGGGGCA+TGG - chr8_1:88006682-88006701 None:intergenic 50.0%
ACTACGACAGGTGAATGCGG+TGG - chr8_1:88002626-88002645 None:intergenic 55.0%
GGAATGGCATACAGCACAGG+AGG + chr8_1:88004200-88004219 Msa1223490:intron 55.0%
AGGAGGAACTCATGGCAGGA+TGG + chr8_1:88004217-88004236 Msa1223490:CDS 55.0%
AAGTTCTTCCCAGGCGGGAT+CGG - chr8_1:88004262-88004281 None:intergenic 55.0%
CTCCAGGTGAAGGACCAGAT+CGG + chr8_1:88004292-88004311 Msa1223490:CDS 55.0%
TACCGATCTGGTCCTTCACC+TGG - chr8_1:88004297-88004316 None:intergenic 55.0%
AAAGCTGCCGGTGCATTTGG+TGG + chr8_1:88004349-88004368 Msa1223490:CDS 55.0%
GCAGGAGGAGGAAAAGGAAC+AGG - chr8_1:88004403-88004422 None:intergenic 55.0%
! GTTCCTTTTCCTCCTCCTGC+TGG + chr8_1:88004403-88004422 Msa1223490:CDS 55.0%
! TCCTTTTCCTCCTCCTGCTG+GGG + chr8_1:88004405-88004424 Msa1223490:CDS 55.0%
AAGGTAAAGTCCCCAGCAGG+AGG - chr8_1:88004418-88004437 None:intergenic 55.0%
! GCTGGTGATTGGTCCAAGCT+AGG + chr8_1:88004442-88004461 Msa1223490:CDS 55.0%
AATTACGCGGTGGCCTAGCT+TGG - chr8_1:88004458-88004477 None:intergenic 55.0%
CTGAGACGAGTCCTCGAGAA+TGG + chr8_1:88004575-88004594 Msa1223490:CDS 55.0%
GGCCTTCTTATCAATGGCCG+TGG + chr8_1:88004620-88004639 Msa1223490:CDS 55.0%
CAGAATAGGACTGCCCGAGA+TGG - chr8_1:88004916-88004935 None:intergenic 55.0%
AGCCGTGACCAGCACAGAAT+AGG - chr8_1:88004930-88004949 None:intergenic 55.0%
GTCAGGTTCCACCTGGTTTC+AGG - chr8_1:88005367-88005386 None:intergenic 55.0%
!! ACTTGCTGTCAGGTTCCACC+TGG - chr8_1:88005374-88005393 None:intergenic 55.0%
AGGTGGAACCTGACAGCAAG+TGG + chr8_1:88005373-88005392 Msa1223490:intron 55.0%
!! GTCTTGGTCCACTTGCTGTC+AGG - chr8_1:88005384-88005403 None:intergenic 55.0%
GGACCAAGACCAAACCCTCA+AGG + chr8_1:88005394-88005413 Msa1223490:CDS 55.0%
! TTGGAGGTAGGCATTGCCTC+CGG - chr8_1:88005611-88005630 None:intergenic 55.0%
CACCCATGACAGCAGTTTGG+AGG - chr8_1:88005627-88005646 None:intergenic 55.0%
!! ATAGGTTCGGTAGTGGGCAG+TGG + chr8_1:88005985-88006004 Msa1223490:intron 55.0%
AACATGATGTCACGAGGGGG+TGG + chr8_1:88006401-88006420 Msa1223490:three_prime_UTR 55.0%
GCACAGGAGGAACTCATGGC+AGG + chr8_1:88004213-88004232 Msa1223490:CDS 60.0%
ACAAACTGTCCGATCCCGCC+TGG + chr8_1:88004250-88004269 Msa1223490:CDS 60.0%
CAAACTGTCCGATCCCGCCT+GGG + chr8_1:88004251-88004270 Msa1223490:CDS 60.0%
TCCCCAGCAGGAGGAGGAAA+AGG - chr8_1:88004409-88004428 None:intergenic 60.0%
GTAAAGTCCCCAGCAGGAGG+AGG - chr8_1:88004415-88004434 None:intergenic 60.0%
CGGGCAGTCCTATTCTGTGC+TGG + chr8_1:88004919-88004938 Msa1223490:CDS 60.0%
CACGGCTAACCAGCCTGTCA+AGG + chr8_1:88004943-88004962 Msa1223490:CDS 60.0%
GGTATCCGGTCCTGTTCCTC+CGG + chr8_1:88005051-88005070 Msa1223490:CDS 60.0%
GTATCCGGTCCTGTTCCTCC+GGG + chr8_1:88005052-88005071 Msa1223490:CDS 60.0%
ACATCAAGAGTAGGGCCCGG+AGG - chr8_1:88005070-88005089 None:intergenic 60.0%
! AGGTAGGCATTGCCTCCGGT+GGG - chr8_1:88005607-88005626 None:intergenic 60.0%
GGGCAAGTGGTCGTGTCACA+AGG + chr8_1:88006341-88006360 Msa1223490:CDS 60.0%
AGAGTAGGGCCCGGAGGAAC+AGG - chr8_1:88005064-88005083 None:intergenic 65.0%
GGCATCTCTACCTCGCCCAC+CGG + chr8_1:88005589-88005608 Msa1223490:CDS 65.0%
ATCTCTACCTCGCCCACCGG+AGG + chr8_1:88005592-88005611 Msa1223490:CDS 65.0%
! GAGGTAGGCATTGCCTCCGG+TGG - chr8_1:88005608-88005627 None:intergenic 65.0%
AGGGCCCGGAGGAACAGGAC+CGG - chr8_1:88005059-88005078 None:intergenic 70.0%
GGCATTGCCTCCGGTGGGCG+AGG - chr8_1:88005602-88005621 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 88002565 88006942 88002565 ID=Msa1223490;Name=Msa1223490
chr8_1 mRNA 88002565 88006942 88002565 ID=Msa1223490-mRNA-1;Parent=Msa1223490;Name=Msa1223490-mRNA-1;_AED=0.09;_eAED=0.09;_QI=345|1|1|1|1|1|8|570|544
chr8_1 exon 88002565 88003056 88002565 ID=Msa1223490-mRNA-1:exon:31928;Parent=Msa1223490-mRNA-1
chr8_1 exon 88003140 88003249 88003140 ID=Msa1223490-mRNA-1:exon:31929;Parent=Msa1223490-mRNA-1
chr8_1 exon 88004201 88004471 88004201 ID=Msa1223490-mRNA-1:exon:31930;Parent=Msa1223490-mRNA-1
chr8_1 exon 88004572 88004674 88004572 ID=Msa1223490-mRNA-1:exon:31931;Parent=Msa1223490-mRNA-1
chr8_1 exon 88004777 88005122 88004777 ID=Msa1223490-mRNA-1:exon:31932;Parent=Msa1223490-mRNA-1
chr8_1 exon 88005375 88005740 88005375 ID=Msa1223490-mRNA-1:exon:31933;Parent=Msa1223490-mRNA-1
chr8_1 exon 88005989 88006067 88005989 ID=Msa1223490-mRNA-1:exon:31934;Parent=Msa1223490-mRNA-1
chr8_1 exon 88006160 88006942 88006160 ID=Msa1223490-mRNA-1:exon:31935;Parent=Msa1223490-mRNA-1
chr8_1 five_prime_UTR 88002565 88002909 88002565 ID=Msa1223490-mRNA-1:five_prime_utr;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88002910 88003056 88002910 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88003140 88003249 88003140 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88004201 88004471 88004201 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88004572 88004674 88004572 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88004777 88005122 88004777 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88005375 88005740 88005375 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88005989 88006067 88005989 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 CDS 88006160 88006372 88006160 ID=Msa1223490-mRNA-1:cds;Parent=Msa1223490-mRNA-1
chr8_1 three_prime_UTR 88006373 88006942 88006373 ID=Msa1223490-mRNA-1:three_prime_utr;Parent=Msa1223490-mRNA-1
Gene Sequence

>Msa1223490

ATGAAATCATATTGCAATGTTGTTTCTTCTCTCTTTCTTGTCACAATATTATTATTTTTTACATCTGTCAAATGTGAAGACCCTTATAGATTCTTCACTTGGAAAATCACATATGGTGACATTTATCCTCTTGGTGTTAAACAACAGGGGATCTTGATTAATGGTCAGTTTCCAGGGCCTCAAATAGATGCTGTTACCAATGAAAACTTGATTATCAGTGTCTATAATTACCTCACTGAACCATTCCTCATTTCTTGGAATGGCATACAGCACAGGAGGAACTCATGGCAGGATGGAGTTTCTGGCACAAACTGTCCGATCCCGCCTGGGAAGAACTTCACTTACACTCTCCAGGTGAAGGACCAGATCGGTACCTACTTCTACTTCCCATCACTTGGAATGCATAAAGCTGCCGGTGCATTTGGTGGCATCAGAATTTGGAGCCGTCCTCGCATTCCTGTTCCTTTTCCTCCTCCTGCTGGGGACTTTACCTTACTTGCTGGTGATTGGTCCAAGCTAGGCCACCGCAGACTGAGACGAGTCCTCGAGAATGGTCACAATCTTCCCTTCCCTGATGGCCTTCTTATCAATGGCCGTGGTTGGAATGGAAACACATTCACTGTCGATCAAGGTAAGACATATAGATTCAGGATATCAAATGTTGGGCTCGCAACATCCATCAACTTCAGAATCCAAGGACACTCATTGAAACTTGTAGAAGTAGAAGGATCTCATACCCTCCAAAACACTTATTCTTCACTCGACATCCATCTCGGGCAGTCCTATTCTGTGCTGGTCACGGCTAACCAGCCTGTCAAGGATTACTACATAGTTGTCTCTACGCGATTCACCAGACGAGTACTCACAACAACTTCCATTCTTCATTACAGCTATTCACGCATCGGGGTATCCGGTCCTGTTCCTCCGGGCCCTACTCTTGATGTTACCTCATCTGTCTTCCAAGCCAGAACTATTAGGTGGAACCTGACAGCAAGTGGACCAAGACCAAACCCTCAAGGATCTTATCACTATGGATTGATCAAGCCGACTCGAACCATCATGCTTGCAAACTCTGCTCCTTACATAAATGGCAAGCAGAGGTATGCTGTCAACAGTGTATCATATATTGCGCCAGACACTCCATTGAAACTTGCTGACTACTTCAACATTCCCGGAGTTTTCTATGTTGGAGGCATCTCTACCTCGCCCACCGGAGGCAATGCCTACCTCCAAACTGCTGTCATGGGTGCTAATTTCCATGAGTATGTGGAGATTGTGTTCCAAAATTGGGAGAATTCTGTGCAATCATGGCATATTGATGGCTATTCCTTCTTTGTTGTAGGGTTCGGTAGTGGGCAGTGGACACCTAATAGTAGAGGACGCTACAATCTGAGAGACACCGTTGCTAGATGTACCACTCAGGTTTATCCAAGGTCATGGACAGCAATATACATGGCTCTTGACAATGTTGGAATGTGGAATATAAGGTCTGAGAATTGGGAAAGGCAGTACTTAGGACAGCAATTCTATCTTAGGGTATACACACCTTCCAAATCATTGAGAGATGAATATCCAGTCCCAAAAAATGCTCTTCTTTGTGGTAGGGCAAGTGGTCGTGTCACAAGGCCTTTCTAG
Protein sequence

>Msa1223490

MKSYCNVVSSLFLVTILLFFTSVKCEDPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNENLIISVYNYLTEPFLISWNGIQHRRNSWQDGVSGTNCPIPPGKNFTYTLQVKDQIGTYFYFPSLGMHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTLLAGDWSKLGHRRLRRVLENGHNLPFPDGLLINGRGWNGNTFTVDQGKTYRFRISNVGLATSINFRIQGHSLKLVEVEGSHTLQNTYSSLDIHLGQSYSVLVTANQPVKDYYIVVSTRFTRRVLTTTSILHYSYSRIGVSGPVPPGPTLDVTSSVFQARTIRWNLTASGPRPNPQGSYHYGLIKPTRTIMLANSAPYINGKQRYAVNSVSYIAPDTPLKLADYFNIPGVFYVGGISTSPTGGNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVGFGSGQWTPNSRGRYNLRDTVARCTTQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPSKSLRDEYPVPKNALLCGRASGRVTRPF*