Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195050 | XP_003594006.1 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195050 | sp|Q10LG8|TLP6_ORYSJ | 65.278 | 360 | 91 | 3 | 34 | 362 | 47 | 403 | 1.59e-173 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195050 | G7ISK0 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0195050 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195050 | Msa0274920 | 0.974332 | 5.705724e-138 | -8.615850e-47 |
| Msa0195050 | Msa0315630 | 0.971272 | 6.662498e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195050 | MtrunA17_Chr2g0286441 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Msa0195050 | MtrunA17_Chr1g0196071 | 62.857 | 385 | 107 | 4 | 11 | 362 | 21 | 402 | 7.89e-175 | 491 |
| Msa0195050 | MtrunA17_Chr2g0278511 | 53.826 | 379 | 125 | 7 | 34 | 362 | 49 | 427 | 5.59e-137 | 396 |
| Msa0195050 | MtrunA17_Chr1g0201891 | 53.385 | 384 | 124 | 7 | 34 | 362 | 48 | 431 | 3.96e-134 | 389 |
| Msa0195050 | MtrunA17_Chr5g0404321 | 52.800 | 375 | 127 | 5 | 32 | 362 | 48 | 416 | 3.45e-131 | 381 |
| Msa0195050 | MtrunA17_Chr8g0373001 | 53.117 | 369 | 133 | 4 | 32 | 362 | 46 | 412 | 7.23e-131 | 380 |
| Msa0195050 | MtrunA17_Chr1g0155301 | 54.722 | 360 | 120 | 5 | 39 | 362 | 70 | 422 | 5.62e-130 | 379 |
| Msa0195050 | MtrunA17_Chr2g0315641 | 49.728 | 368 | 148 | 6 | 16 | 362 | 20 | 371 | 2.37e-118 | 347 |
| Msa0195050 | MtrunA17_Chr2g0315651 | 44.838 | 339 | 164 | 6 | 39 | 362 | 37 | 367 | 6.73e-93 | 282 |
| Msa0195050 | MtrunA17_Chr8g0373361 | 41.322 | 363 | 166 | 8 | 32 | 355 | 51 | 405 | 6.23e-80 | 250 |
| Msa0195050 | MtrunA17_Chr8g0373331 | 35.278 | 360 | 137 | 8 | 32 | 353 | 45 | 346 | 2.54e-61 | 200 |
| Msa0195050 | MtrunA17_Chr1g0156151 | 58.904 | 146 | 56 | 1 | 54 | 195 | 66 | 211 | 1.43e-53 | 176 |
| Msa0195050 | MtrunA17_Chr8g0373341 | 38.507 | 335 | 121 | 10 | 39 | 352 | 50 | 320 | 2.61e-52 | 176 |
| Msa0195050 | MtrunA17_Chr8g0373351 | 32.967 | 364 | 114 | 10 | 32 | 354 | 12 | 286 | 5.88e-47 | 161 |
| Msa0195050 | MtrunA17_Chr3g0091401 | 42.268 | 97 | 50 | 1 | 82 | 178 | 9 | 99 | 1.31e-15 | 72.0 |
| Msa0195050 | MtrunA17_Chr2g0334041 | 27.731 | 238 | 137 | 11 | 134 | 361 | 147 | 359 | 1.61e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195050 | AT2G47900.2 | 64.752 | 383 | 97 | 5 | 12 | 362 | 30 | 406 | 1.85e-173 | 489 |
| Msa0195050 | AT2G47900.1 | 64.752 | 383 | 97 | 5 | 12 | 362 | 30 | 406 | 1.85e-173 | 489 |
| Msa0195050 | AT2G47900.3 | 64.583 | 384 | 97 | 5 | 12 | 362 | 30 | 407 | 2.09e-173 | 488 |
| Msa0195050 | AT3G06380.1 | 55.270 | 389 | 133 | 7 | 4 | 362 | 3 | 380 | 8.73e-143 | 410 |
| Msa0195050 | AT5G18680.1 | 53.750 | 400 | 131 | 9 | 4 | 362 | 3 | 389 | 2.31e-140 | 404 |
| Msa0195050 | AT2G18280.2 | 53.994 | 363 | 125 | 6 | 32 | 362 | 41 | 393 | 3.52e-128 | 373 |
| Msa0195050 | AT2G18280.1 | 53.994 | 363 | 125 | 6 | 32 | 362 | 41 | 393 | 3.52e-128 | 373 |
| Msa0195050 | AT1G47270.3 | 51.515 | 363 | 133 | 5 | 32 | 362 | 37 | 388 | 4.25e-127 | 370 |
| Msa0195050 | AT1G47270.2 | 51.515 | 363 | 133 | 5 | 32 | 362 | 61 | 412 | 6.01e-127 | 371 |
| Msa0195050 | AT1G47270.1 | 51.515 | 363 | 133 | 5 | 32 | 362 | 62 | 413 | 8.06e-127 | 370 |
| Msa0195050 | AT1G43640.1 | 47.901 | 405 | 146 | 10 | 14 | 362 | 34 | 429 | 6.74e-126 | 369 |
| Msa0195050 | AT1G76900.2 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0195050 | AT1G76900.1 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0195050 | AT1G76900.3 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0195050 | AT1G25280.1 | 51.646 | 395 | 122 | 9 | 34 | 362 | 54 | 445 | 3.71e-124 | 365 |
| Msa0195050 | AT1G43640.2 | 49.454 | 366 | 124 | 9 | 53 | 362 | 3 | 363 | 8.52e-119 | 348 |
| Msa0195050 | AT1G53320.1 | 45.736 | 387 | 168 | 6 | 3 | 362 | 8 | 379 | 7.01e-109 | 323 |
| Msa0195050 | AT5G18680.2 | 54.369 | 309 | 89 | 7 | 93 | 362 | 2 | 297 | 1.95e-106 | 314 |
| Msa0195050 | AT3G06380.2 | 56.897 | 290 | 90 | 5 | 102 | 362 | 5 | 288 | 1.31e-104 | 309 |
| Msa0195050 | AT1G25280.3 | 49.259 | 270 | 69 | 8 | 158 | 362 | 1 | 267 | 9.12e-73 | 227 |
| Msa0195050 | AT1G25280.2 | 49.259 | 270 | 69 | 8 | 158 | 362 | 1 | 267 | 9.12e-73 | 227 |
| Msa0195050 | AT1G61940.2 | 68.605 | 86 | 27 | 0 | 42 | 127 | 1 | 86 | 1.50e-36 | 133 |
| Msa0195050 | AT1G61940.1 | 70.492 | 61 | 18 | 0 | 42 | 102 | 1 | 61 | 1.74e-22 | 95.5 |
| Msa0195050 | AT1G61940.1 | 43.564 | 101 | 32 | 5 | 207 | 306 | 102 | 178 | 2.83e-13 | 69.3 |
Find 128 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATCATAGCTGAAATTTC+AGG | 0.195471 | 2_1:-11691910 | None:intergenic |
| GACAAGATTATTCTGCAATT+TGG | 0.212541 | 2_1:+11694960 | Msa0195050:CDS |
| ATACCCTATTTCGGCATTTC+AGG | 0.216986 | 2_1:+11695019 | Msa0195050:CDS |
| TCGTGTGCAGCACCTTATTA+TGG | 0.239324 | 2_1:-11696163 | None:intergenic |
| AATGCCTGAAATGCCGAAAT+AGG | 0.239475 | 2_1:-11695023 | None:intergenic |
| GGTGGAACCGAAATCGAAAT+TGG | 0.239615 | 2_1:+11691616 | Msa0195050:five_prime_UTR |
| TTTCAAAATCAGTAACAAAT+TGG | 0.270566 | 2_1:+11696402 | Msa0195050:three_prime_UTR |
| TGGCGGTTGGCGACAGTTTA+CGG | 0.281341 | 2_1:+11691731 | Msa0195050:CDS |
| CAGATCGCCAATTTCGATTT+CGG | 0.295293 | 2_1:-11691623 | None:intergenic |
| GAAAACCTGTTTAACAGAAA+TGG | 0.297610 | 2_1:-11691938 | None:intergenic |
| CTCTTATTCACAAGCAATCT+TGG | 0.300510 | 2_1:-11695072 | None:intergenic |
| TCTCAGATTGTGATCTAATC+TGG | 0.312471 | 2_1:-11696059 | None:intergenic |
| GTTCTACTGAATCCATAATA+AGG | 0.331885 | 2_1:+11696151 | Msa0195050:three_prime_UTR |
| TGGAAGAGACAAGAAGTTAA+AGG | 0.343035 | 2_1:-11691250 | None:intergenic |
| AAAACCTGTTTAACAGAAAT+GGG | 0.345752 | 2_1:-11691937 | None:intergenic |
| CTTCATAAATACTTTCTCAT+TGG | 0.351432 | 2_1:-11696115 | None:intergenic |
| ATTCTGCAATTTGGAAAAGT+TGG | 0.358632 | 2_1:+11694969 | Msa0195050:CDS |
| TTTCCCCATTTCTGTTAAAC+AGG | 0.366547 | 2_1:+11691933 | Msa0195050:CDS |
| GGATTTCCGATACCCTATTT+CGG | 0.372729 | 2_1:+11695010 | Msa0195050:CDS |
| AGTAGTGGTGGTGGCGGAGA+AGG | 0.373376 | 2_1:+11691699 | Msa0195050:CDS |
| CTGGTGGCTTCTGCAGAAAA+TGG | 0.375077 | 2_1:+11694918 | Msa0195050:CDS |
| CGAAATCGAAATTGGCGATC+TGG | 0.382016 | 2_1:+11691624 | Msa0195050:five_prime_UTR |
| TCCTTAAGATCAAATTTCCT+TGG | 0.391394 | 2_1:+11694018 | Msa0195050:intron |
| AACATAGTTGTTGCTTCCCC+TGG | 0.398674 | 2_1:-11693892 | None:intergenic |
| GAATAAGAGCATGTTTAAAC+AGG | 0.410840 | 2_1:+11695086 | Msa0195050:exon |
| AAAGTATTTATGAAGATGAT+TGG | 0.413949 | 2_1:+11696123 | Msa0195050:three_prime_UTR |
| ACAGTTTACGGCAGAGTTGT+TGG | 0.415866 | 2_1:+11691743 | Msa0195050:CDS |
| TTCTGCAATTTGGAAAAGTT+GGG | 0.417811 | 2_1:+11694970 | Msa0195050:CDS |
| TCTCTATCCGGACCTCTTGT+TGG | 0.419329 | 2_1:+11694774 | Msa0195050:CDS |
| TGATGACGGGAAGTTCCTTC+TGG | 0.420704 | 2_1:+11693803 | Msa0195050:CDS |
| TTACTAAAAGTCGTTCTACT+AGG | 0.428715 | 2_1:+11694091 | Msa0195050:CDS |
| AGAATAATCTTGTCGTGTTC+CGG | 0.431735 | 2_1:-11694951 | None:intergenic |
| CAGTTTACGGCAGAGTTGTT+GGG | 0.438166 | 2_1:+11691744 | Msa0195050:CDS |
| ATGCCTGAAATGCCGAAATA+GGG | 0.443678 | 2_1:-11695022 | None:intergenic |
| AAGAACGTTGTTGCGTGTGC+TGG | 0.445764 | 2_1:+11691841 | Msa0195050:CDS |
| TTGCTCCTGCATGAGGTGGC+TGG | 0.453181 | 2_1:-11694065 | None:intergenic |
| TTTGATGATTTGTCTGAGAA+AGG | 0.460293 | 2_1:-11691391 | None:intergenic |
| GGTTGGTTGTTTCAAGATGG+TGG | 0.472819 | 2_1:-11691215 | None:intergenic |
| GGCATGAGCAGCTGCAGTGT+TGG | 0.476628 | 2_1:+11694844 | Msa0195050:CDS |
| GGGGAAGCAACAACTATGTT+GGG | 0.477342 | 2_1:+11693895 | Msa0195050:CDS |
| TCTGCAGAAAATGGAACAGC+TGG | 0.479879 | 2_1:+11694927 | Msa0195050:CDS |
| CGAAATTGGCGATCTGGGTA+TGG | 0.481674 | 2_1:+11691630 | Msa0195050:exon |
| TGCGCTTTATAAAGCATTGA+AGG | 0.484376 | 2_1:-11693618 | None:intergenic |
| AGGAGATTCTCCCTTGGACC+AGG | 0.489762 | 2_1:-11693598 | None:intergenic |
| GAAATCGAAATTGGCGATCT+GGG | 0.491064 | 2_1:+11691625 | Msa0195050:five_prime_UTR |
| AATAATATGTTTGAGTGGAC+CGG | 0.492380 | 2_1:-11693642 | None:intergenic |
| GGAATAATTTACACGAATGA+AGG | 0.496581 | 2_1:-11696242 | None:intergenic |
| TCTTCTCCGAATTGAGGCCT+CGG | 0.497256 | 2_1:+11691798 | Msa0195050:CDS |
| AATGCTTTATAAAGCGCAAC+CGG | 0.499079 | 2_1:+11693623 | Msa0195050:CDS |
| TGAAGTTCTTCTCCGAATTG+AGG | 0.501294 | 2_1:+11691792 | Msa0195050:CDS |
| TGGGAAGGATTTGTTTACAA+TGG | 0.502527 | 2_1:+11694989 | Msa0195050:CDS |
| GACGGCCAGCCACCTCATGC+AGG | 0.508409 | 2_1:+11694060 | Msa0195050:CDS |
| AGGGGAAGCAACAACTATGT+TGG | 0.508852 | 2_1:+11693894 | Msa0195050:CDS |
| TAAAAGTGTTGCGTTGATTG+AGG | 0.511529 | 2_1:-11691540 | None:intergenic |
| TTTATCGCCAACAAGAGGTC+CGG | 0.512577 | 2_1:-11694781 | None:intergenic |
| ACACATGAGATAAGAAGAGT+TGG | 0.513014 | 2_1:-11691270 | None:intergenic |
| TGCAGCTGCTCATGCCACCT+CGG | 0.519909 | 2_1:-11694837 | None:intergenic |
| AGAAAATGGAACAGCTGGAC+CGG | 0.520515 | 2_1:+11694932 | Msa0195050:CDS |
| ACAACTATGTTGGGAAATTG+AGG | 0.521031 | 2_1:+11693904 | Msa0195050:CDS |
| TAGACGCAGATGATATGTCC+AGG | 0.522084 | 2_1:+11693874 | Msa0195050:CDS |
| ATTTGTCTGAGAAAGGAAAA+GGG | 0.526002 | 2_1:-11691384 | None:intergenic |
| GTGGTAGAGAACTCTCTATC+CGG | 0.528357 | 2_1:+11694762 | Msa0195050:CDS |
| ATGACACAGTGCATTCTCCT+TGG | 0.528561 | 2_1:-11694618 | None:intergenic |
| TACTCGCAATAACATAATAA+CGG | 0.535052 | 2_1:+11696364 | Msa0195050:three_prime_UTR |
| TCATGTCTTCGATTATGTTG+CGG | 0.535725 | 2_1:-11691660 | None:intergenic |
| TTCGATTGAAGAGGATGGAA+TGG | 0.537253 | 2_1:-11694646 | None:intergenic |
| AGATAGTGAACTTTGTTCCA+AGG | 0.538026 | 2_1:-11694035 | None:intergenic |
| TGTCCTCCGAGGCCTCAATT+CGG | 0.540412 | 2_1:-11691804 | None:intergenic |
| ATTCAGCGCTAGGTGATGAC+GGG | 0.542238 | 2_1:+11693790 | Msa0195050:intron |
| AAAGGTAGGTACATGATGGT+TGG | 0.542875 | 2_1:-11691232 | None:intergenic |
| AGAGAAAACTCAGTTTGTGT+AGG | 0.543872 | 2_1:-11694684 | None:intergenic |
| AAAAGTGTTGCGTTGATTGA+GGG | 0.544347 | 2_1:-11691539 | None:intergenic |
| AATTCAGCGCTAGGTGATGA+CGG | 0.546541 | 2_1:+11693789 | Msa0195050:intron |
| AAGGAGAATGCACTGTGTCA+TGG | 0.546764 | 2_1:+11694620 | Msa0195050:CDS |
| GATTTGTCTGAGAAAGGAAA+AGG | 0.547431 | 2_1:-11691385 | None:intergenic |
| ATGATATAATCTGTGCATGT+AGG | 0.547626 | 2_1:-11693846 | None:intergenic |
| TGTGTAGGAGCTACGCCACC+TGG | 0.549577 | 2_1:-11694669 | None:intergenic |
| GAGAAAGGAAAAGGGTGAGA+AGG | 0.550884 | 2_1:-11691376 | None:intergenic |
| GCAATTTGGAAAAGTTGGGA+AGG | 0.553649 | 2_1:+11694974 | Msa0195050:CDS |
| ACTTCACGCAGAAGCTCTTG+TGG | 0.562675 | 2_1:-11691775 | None:intergenic |
| CCATCCTCTTCAATCGAACC+AGG | 0.562739 | 2_1:+11694651 | Msa0195050:CDS |
| CATTGAAGGAGATTCTCCCT+TGG | 0.563702 | 2_1:-11693604 | None:intergenic |
| GATGGTTGGTTGTTTCAAGA+TGG | 0.564154 | 2_1:-11691218 | None:intergenic |
| CACGCAACAACGTTCTTCCT+CGG | 0.565317 | 2_1:-11691835 | None:intergenic |
| GTGCTGGAGTGTGTAGGAGT+TGG | 0.567870 | 2_1:+11691857 | Msa0195050:CDS |
| GGCGGAGAAGGAAGAGAAAG+TGG | 0.570148 | 2_1:+11691711 | Msa0195050:CDS |
| CCTGGTTCGATTGAAGAGGA+TGG | 0.573458 | 2_1:-11694651 | None:intergenic |
| TATGATTGTGTGTGAAGAAG+AGG | 0.579866 | 2_1:-11691338 | None:intergenic |
| TACATTTGCGTGCAGCCAGA+AGG | 0.580300 | 2_1:-11693818 | None:intergenic |
| TGGACGGGTGACAATTGCCT+CGG | 0.581243 | 2_1:+11694881 | Msa0195050:CDS |
| TGGTTGTTTCAAGATGGTGG+AGG | 0.581795 | 2_1:-11691212 | None:intergenic |
| AAGGAAGAGAAAGTGGCGGT+TGG | 0.582497 | 2_1:+11691718 | Msa0195050:CDS |
| AGTTAAAGGTAGGTACATGA+TGG | 0.588350 | 2_1:-11691236 | None:intergenic |
| ATCGCAAAGAGTAGTGGTGG+TGG | 0.589679 | 2_1:+11691690 | Msa0195050:CDS |
| TTGCGTGTGCTGGAGTGTGT+AGG | 0.591079 | 2_1:+11691851 | Msa0195050:CDS |
| CGGAGGACACGTGGCCGCCG+AGG | 0.594437 | 2_1:+11691818 | Msa0195050:CDS |
| TATGTTTGAATGTCACTTGG+TGG | 0.595420 | 2_1:+11696084 | Msa0195050:three_prime_UTR |
| GCAAAGAGTAGTGGTGGTGG+CGG | 0.599034 | 2_1:+11691693 | Msa0195050:CDS |
| CTTGTTGGCGATAAAAGAGA+TGG | 0.602960 | 2_1:+11694789 | Msa0195050:CDS |
| GAAATGCCGAAATAGGGTAT+CGG | 0.603573 | 2_1:-11695016 | None:intergenic |
| CCGATCAAAATCAAATCGTG+TGG | 0.606213 | 2_1:+11694743 | Msa0195050:CDS |
| AAGAATTTATGTACAGCACA+AGG | 0.606359 | 2_1:-11696265 | None:intergenic |
| GAATTTATGTACAGCACAAG+GGG | 0.607071 | 2_1:-11696263 | None:intergenic |
| TATTTATGAAGATGATTGGA+TGG | 0.607206 | 2_1:+11696127 | Msa0195050:three_prime_UTR |
| TTGAGGCCTCGGAGGACACG+TGG | 0.607574 | 2_1:+11691809 | Msa0195050:CDS |
| GCCACCTGGTTCGATTGAAG+AGG | 0.610396 | 2_1:-11694655 | None:intergenic |
| AAACAAATAATATGTTTGAG+TGG | 0.611039 | 2_1:-11693647 | None:intergenic |
| AGCACATAGGATCTCAAAGT+GGG | 0.611741 | 2_1:-11691187 | None:intergenic |
| AGAGACAAGAAGTTAAAGGT+AGG | 0.613029 | 2_1:-11691246 | None:intergenic |
| AGACGCAGATGATATGTCCA+GGG | 0.615218 | 2_1:+11693875 | Msa0195050:CDS |
| ATCAAGATCGCAAAGAGTAG+TGG | 0.616284 | 2_1:+11691684 | Msa0195050:CDS |
| ATGTTTGAATGTCACTTGGT+GGG | 0.623108 | 2_1:+11696085 | Msa0195050:three_prime_UTR |
| ACAAAGTTCACTATCTATGA+CGG | 0.627271 | 2_1:+11694042 | Msa0195050:CDS |
| AGAATTTATGTACAGCACAA+GGG | 0.629375 | 2_1:-11696264 | None:intergenic |
| AAAGTGTTGCGTTGATTGAG+GGG | 0.634514 | 2_1:-11691538 | None:intergenic |
| TCTCCGAATTGAGGCCTCGG+AGG | 0.639401 | 2_1:+11691801 | Msa0195050:CDS |
| AAATATGTTTGAATGTCACT+TGG | 0.642156 | 2_1:+11696081 | Msa0195050:three_prime_UTR |
| GATGGTGGAGGAGAGCACAT+AGG | 0.644366 | 2_1:-11691200 | None:intergenic |
| AAGATCGCAAAGAGTAGTGG+TGG | 0.644592 | 2_1:+11691687 | Msa0195050:CDS |
| CGGCGGCCACGTGTCCTCCG+AGG | 0.663112 | 2_1:-11691815 | None:intergenic |
| TCTTGGTATCAAAGCTGCTG+AGG | 0.664183 | 2_1:-11695055 | None:intergenic |
| GATTGTGTGTGAAGAAGAGG+TGG | 0.672482 | 2_1:-11691335 | None:intergenic |
| AAACCTGTTTAACAGAAATG+GGG | 0.674456 | 2_1:-11691936 | None:intergenic |
| GAGCACATAGGATCTCAAAG+TGG | 0.685835 | 2_1:-11691188 | None:intergenic |
| TCCTCTTCAATCGAACCAGG+TGG | 0.710835 | 2_1:+11694654 | Msa0195050:CDS |
| GACGCAGATGATATGTCCAG+GGG | 0.717675 | 2_1:+11693876 | Msa0195050:CDS |
| GCAACAACGTTCTTCCTCGG+CGG | 0.717767 | 2_1:-11691832 | None:intergenic |
| GGAGAAGGAAGAGAAAGTGG+CGG | 0.735942 | 2_1:+11691714 | Msa0195050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATATTATTAATTTTCT+GGG | + | chr2_1:11695228-11695247 | Msa0195050:intron | 10.0% |
| !!! | TATATATTATTAATTTTCTG+GGG | + | chr2_1:11695229-11695248 | Msa0195050:intron | 10.0% |
| !!! | ATAAAACAATTTGTTTTATT+TGG | + | chr2_1:11695276-11695295 | Msa0195050:intron | 10.0% |
| !! | TTAAAAAAGTGATTTATGTT+TGG | + | chr2_1:11692093-11692112 | Msa0195050:intron | 15.0% |
| !! | ATATAATTATGTGGATATAA+TGG | - | chr2_1:11692769-11692788 | None:intergenic | 15.0% |
| !! | ATATAGAACATATAATTATG+TGG | - | chr2_1:11692778-11692797 | None:intergenic | 15.0% |
| !! | AATGTAATACTAAATTACTA+AGG | - | chr2_1:11693520-11693539 | None:intergenic | 15.0% |
| !! | GCAAAAATATAAAACAATAA+CGG | - | chr2_1:11693958-11693977 | None:intergenic | 15.0% |
| !! | TTAAGGAAGAATAAAAAAAA+AGG | - | chr2_1:11694005-11694024 | None:intergenic | 15.0% |
| !! | TGTTAAAAATTGATTAAAAC+TGG | + | chr2_1:11695128-11695147 | Msa0195050:intron | 15.0% |
| !!! | GGTATATATTATTAATTTTC+TGG | + | chr2_1:11695227-11695246 | Msa0195050:intron | 15.0% |
| !! | AACTATTAAGAAAGATTTAA+AGG | - | chr2_1:11695619-11695638 | None:intergenic | 15.0% |
| !! | TTAAATCTTTCTTAATAGTT+TGG | + | chr2_1:11695619-11695638 | Msa0195050:intron | 15.0% |
| !!! | TTAACAATATGATTTTCATT+TGG | + | chr2_1:11696311-11696330 | Msa0195050:three_prime_UTR | 15.0% |
| !!! | TGATTTTTTGAAGAAGAAAA+GGG | - | chr2_1:11691463-11691482 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTGAAGAAGAAA+AGG | - | chr2_1:11691464-11691483 | None:intergenic | 20.0% |
| !!! | TTTGCATTATTTTACCTTAT+GGG | - | chr2_1:11691499-11691518 | None:intergenic | 20.0% |
| !!! | TTTTGCATTATTTTACCTTA+TGG | - | chr2_1:11691500-11691519 | None:intergenic | 20.0% |
| !! | ATTGTTTAGATATTGTGTAA+AGG | + | chr2_1:11692144-11692163 | Msa0195050:intron | 20.0% |
| !! | ATTTAGCATGATTAATTGTT+TGG | + | chr2_1:11692248-11692267 | Msa0195050:intron | 20.0% |
| !!! | ACCAAATTTTATGTTTATCT+TGG | + | chr2_1:11692342-11692361 | Msa0195050:intron | 20.0% |
| !! | ACCAAGATAAACATAAAATT+TGG | - | chr2_1:11692346-11692365 | None:intergenic | 20.0% |
| !! | TACTTAATAGAGTTACATAT+TGG | - | chr2_1:11692530-11692549 | None:intergenic | 20.0% |
| !! | ATAAAAATAACAGATCCAAT+GGG | - | chr2_1:11692610-11692629 | None:intergenic | 20.0% |
| !! | TATAAAAATAACAGATCCAA+TGG | - | chr2_1:11692611-11692630 | None:intergenic | 20.0% |
| !!! | ATGTTATTAATGGATAATGT+AGG | + | chr2_1:11692713-11692732 | Msa0195050:intron | 20.0% |
| !!! | TGTTATTAATGGATAATGTA+GGG | + | chr2_1:11692714-11692733 | Msa0195050:intron | 20.0% |
| !! | AACTTAATATCACAATTTAG+CGG | - | chr2_1:11692818-11692837 | None:intergenic | 20.0% |
| !! | AAACAAATAATATGTTTGAG+TGG | - | chr2_1:11693650-11693669 | None:intergenic | 20.0% |
| !!! | TAATCAATTTTTAACACAGT+TGG | - | chr2_1:11695124-11695143 | None:intergenic | 20.0% |
| !!! | CATCAATGCTATTTTATATT+TGG | - | chr2_1:11695386-11695405 | None:intergenic | 20.0% |
| !! | ATAAACTATAAGGTTATGTT+TGG | - | chr2_1:11695440-11695459 | None:intergenic | 20.0% |
| !!! | AAAGTATTTATGAAGATGAT+TGG | + | chr2_1:11696123-11696142 | Msa0195050:three_prime_UTR | 20.0% |
| !! | TAAAAGAGAAGAAAAATTGA+GGG | - | chr2_1:11696294-11696313 | None:intergenic | 20.0% |
| !! | TTAAAAGAGAAGAAAAATTG+AGG | - | chr2_1:11696295-11696314 | None:intergenic | 20.0% |
| !! | TTTCAAAATCAGTAACAAAT+TGG | + | chr2_1:11696402-11696421 | Msa0195050:three_prime_UTR | 20.0% |
| !!! | TTGCATTATTTTACCTTATG+GGG | - | chr2_1:11691498-11691517 | None:intergenic | 25.0% |
| !! | AGGTGAAATTTTTCATCTTT+TGG | + | chr2_1:11691595-11691614 | Msa0195050:five_prime_UTR | 25.0% |
| !! | TGAAATTTTTCATCTTTTGG+TGG | + | chr2_1:11691598-11691617 | Msa0195050:five_prime_UTR | 25.0% |
| ! | AAAACCTGTTTAACAGAAAT+GGG | - | chr2_1:11691940-11691959 | None:intergenic | 25.0% |
| !!! | TGATTTTGTAGCATTGATTT+TGG | + | chr2_1:11692070-11692089 | Msa0195050:intron | 25.0% |
| !! | TTGGATTTGGTTGTTTATAA+TGG | + | chr2_1:11692178-11692197 | Msa0195050:intron | 25.0% |
| !! | TGGATTTGGTTGTTTATAAT+GGG | + | chr2_1:11692179-11692198 | Msa0195050:intron | 25.0% |
| ! | ATGATTAATTGTTTGGATGA+GGG | + | chr2_1:11692255-11692274 | Msa0195050:intron | 25.0% |
| !!! | TACCTTGTTTCTTTGTTATT+TGG | + | chr2_1:11692297-11692316 | Msa0195050:intron | 25.0% |
| ! | TACCAAATAACAAAGAAACA+AGG | - | chr2_1:11692302-11692321 | None:intergenic | 25.0% |
| !!! | AGTGTGGAAAATTGTTATTT+TGG | + | chr2_1:11692683-11692702 | Msa0195050:intron | 25.0% |
| !!! | TGGAAAATTGTTATTTTGGT+TGG | + | chr2_1:11692687-11692706 | Msa0195050:intron | 25.0% |
| !! | AGCACAAAATATCTAGAATT+AGG | - | chr2_1:11692746-11692765 | None:intergenic | 25.0% |
| ! | TATGTTCTATATTATCTGAG+AGG | + | chr2_1:11692786-11692805 | Msa0195050:intron | 25.0% |
| !! | GCTAGGATATAATTATGTTT+TGG | + | chr2_1:11693065-11693084 | Msa0195050:intron | 25.0% |
| !!! | AATTATGTTTTGGTTGAGTA+CGG | + | chr2_1:11693075-11693094 | Msa0195050:intron | 25.0% |
| ! | TAATTGAATGTAACATGTGT+CGG | - | chr2_1:11693160-11693179 | None:intergenic | 25.0% |
| ! | CCATATTCTCAAATTATTAC+CGG | + | chr2_1:11693182-11693201 | Msa0195050:intron | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | - | chr2_1:11693258-11693277 | None:intergenic | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | - | chr2_1:11693258-11693277 | None:intergenic | 25.0% |
| ! | CATATCAACAACAAAGAATA+TGG | - | chr2_1:11693294-11693313 | None:intergenic | 25.0% |
| !! | AATTTTCCTAACCAAAAAGT+AGG | + | chr2_1:11693315-11693334 | Msa0195050:intron | 25.0% |
| ! | ATGATGATTGAATATGACTA+TGG | + | chr2_1:11693444-11693463 | Msa0195050:intron | 25.0% |
| !! | TTTACCTAACATGTTTCTAT+TGG | + | chr2_1:11693559-11693578 | Msa0195050:intron | 25.0% |
| !! | TTTCTATTGGCGAATAATTT+TGG | + | chr2_1:11693572-11693591 | Msa0195050:intron | 25.0% |
| ! | GTGAGTATACAATTAATCTT+TGG | + | chr2_1:11693686-11693705 | Msa0195050:intron | 25.0% |
| ! | TCATATGAATTAAATGTGCT+AGG | + | chr2_1:11694177-11694196 | Msa0195050:intron | 25.0% |
| ! | TGTCGAACAAAATAAAAGTA+TGG | - | chr2_1:11694492-11694511 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGATCGGAAAAA+AGG | - | chr2_1:11694738-11694757 | None:intergenic | 25.0% |
| !! | ATCATTGAGCAAATACATTT+TGG | + | chr2_1:11695175-11695194 | Msa0195050:intron | 25.0% |
| !!! | ATATTATTAATTTTCTGGGG+TGG | + | chr2_1:11695232-11695251 | Msa0195050:intron | 25.0% |
| ! | AGGGTTTGATATAAACTATA+AGG | - | chr2_1:11695450-11695469 | None:intergenic | 25.0% |
| ! | CCATTATAAATACCAGAAAA+GGG | - | chr2_1:11695469-11695488 | None:intergenic | 25.0% |
| ! | TAGAACATTATGACATTGTT+TGG | - | chr2_1:11695557-11695576 | None:intergenic | 25.0% |
| ! | AATCTTTCTTAATAGTTTGG+AGG | + | chr2_1:11695622-11695641 | Msa0195050:intron | 25.0% |
| ! | TTTACAATCAAAATATGCAG+CGG | - | chr2_1:11695795-11695814 | None:intergenic | 25.0% |
| ! | AATAAAGTAACTGAGATAAC+AGG | - | chr2_1:11695961-11695980 | None:intergenic | 25.0% |
| ! | GTTTATCTAATGAGAATGTT+TGG | + | chr2_1:11696012-11696031 | Msa0195050:intron | 25.0% |
| ! | AAATATGTTTGAATGTCACT+TGG | + | chr2_1:11696081-11696100 | Msa0195050:three_prime_UTR | 25.0% |
| ! | CTTCATAAATACTTTCTCAT+TGG | - | chr2_1:11696118-11696137 | None:intergenic | 25.0% |
| ! | TATTTATGAAGATGATTGGA+TGG | + | chr2_1:11696127-11696146 | Msa0195050:three_prime_UTR | 25.0% |
| ! | TACTCGCAATAACATAATAA+CGG | + | chr2_1:11696364-11696383 | Msa0195050:three_prime_UTR | 25.0% |
| ATTTGTCTGAGAAAGGAAAA+GGG | - | chr2_1:11691387-11691406 | None:intergenic | 30.0% | |
| ! | TTTGATGATTTGTCTGAGAA+AGG | - | chr2_1:11691394-11691413 | None:intergenic | 30.0% |
| GAAGATTGTGATGAAAAAAG+GGG | - | chr2_1:11691441-11691460 | None:intergenic | 30.0% | |
| GGAAGATTGTGATGAAAAAA+GGG | - | chr2_1:11691442-11691461 | None:intergenic | 30.0% | |
| ! | AATTTTTCTCATTCCCCATA+AGG | + | chr2_1:11691482-11691501 | Msa0195050:five_prime_UTR | 30.0% |
| ! | TTCTCTCTCTTCTCTTTTAA+AGG | + | chr2_1:11691575-11691594 | Msa0195050:five_prime_UTR | 30.0% |
| AAACCTGTTTAACAGAAATG+GGG | - | chr2_1:11691939-11691958 | None:intergenic | 30.0% | |
| GAAAACCTGTTTAACAGAAA+TGG | - | chr2_1:11691941-11691960 | None:intergenic | 30.0% | |
| AAAGCGATAGAAAATGAGAA+TGG | - | chr2_1:11691971-11691990 | None:intergenic | 30.0% | |
| ATTTATGTTTGGATGCTTTG+AGG | + | chr2_1:11692104-11692123 | Msa0195050:intron | 30.0% | |
| !! | AGATTTTGTTTGATGCATTG+AGG | + | chr2_1:11692203-11692222 | Msa0195050:intron | 30.0% |
| TTTGATGCATTGAGGTTAAT+TGG | + | chr2_1:11692211-11692230 | Msa0195050:intron | 30.0% | |
| TTGATGCATTGAGGTTAATT+GGG | + | chr2_1:11692212-11692231 | Msa0195050:intron | 30.0% | |
| CATGATTAATTGTTTGGATG+AGG | + | chr2_1:11692254-11692273 | Msa0195050:intron | 30.0% | |
| GTAAATGTAAACATACACAG+AGG | - | chr2_1:11692588-11692607 | None:intergenic | 30.0% | |
| GTATGTTTACATTTACCCAT+TGG | + | chr2_1:11692592-11692611 | Msa0195050:intron | 30.0% | |
| ! | TGGTTGGTCAATGTTATTAA+TGG | + | chr2_1:11692703-11692722 | Msa0195050:intron | 30.0% |
| !! | TAATGGATAATGTAGGGTTT+TGG | + | chr2_1:11692720-11692739 | Msa0195050:intron | 30.0% |
| TTCTATATTATCTGAGAGGT+TGG | + | chr2_1:11692790-11692809 | Msa0195050:intron | 30.0% | |
| TCTATATTATCTGAGAGGTT+GGG | + | chr2_1:11692791-11692810 | Msa0195050:intron | 30.0% | |
| TCAACTTGTGAAACTTTACA+TGG | + | chr2_1:11692840-11692859 | Msa0195050:intron | 30.0% | |
| CAACTTGTGAAACTTTACAT+GGG | + | chr2_1:11692841-11692860 | Msa0195050:intron | 30.0% | |
| ! | GGTCATTTCAATGTCTTTTA+AGG | - | chr2_1:11692884-11692903 | None:intergenic | 30.0% |
| TAAAAGACATTGAAATGACC+AGG | + | chr2_1:11692884-11692903 | Msa0195050:intron | 30.0% | |
| TAATAACCAGAAACAAAACC+TGG | - | chr2_1:11692905-11692924 | None:intergenic | 30.0% | |
| !!! | ATTATGTTTTGGTTGAGTAC+GGG | + | chr2_1:11693076-11693095 | Msa0195050:intron | 30.0% |
| CCGGTAATAATTTGAGAATA+TGG | - | chr2_1:11693185-11693204 | None:intergenic | 30.0% | |
| GAATATGGAAAACACAAACA+CGG | - | chr2_1:11693243-11693262 | None:intergenic | 30.0% | |
| TATACTATTCAACACCAAAG+AGG | - | chr2_1:11693384-11693403 | None:intergenic | 30.0% | |
| !! | TTGGTGTTGAATAGTATACA+TGG | + | chr2_1:11693386-11693405 | Msa0195050:intron | 30.0% |
| GATTGAATATGACTATGTTG+TGG | + | chr2_1:11693449-11693468 | Msa0195050:intron | 30.0% | |
| AATATGACTATGTTGTGGAA+GGG | + | chr2_1:11693454-11693473 | Msa0195050:intron | 30.0% | |
| !! | TACATTGTTTTACAGCACTA+TGG | + | chr2_1:11693534-11693553 | Msa0195050:intron | 30.0% |
| AATAATATGTTTGAGTGGAC+CGG | - | chr2_1:11693645-11693664 | None:intergenic | 30.0% | |
| TGAAGGTTTAGATCTCAAAA+AGG | - | chr2_1:11693750-11693769 | None:intergenic | 30.0% | |
| ! | TGAGATCTAAACCTTCATTT+TGG | + | chr2_1:11693753-11693772 | Msa0195050:intron | 30.0% |
| ATGATATAATCTGTGCATGT+AGG | - | chr2_1:11693849-11693868 | None:intergenic | 30.0% | |
| !!! | ATTTTTGCTGTTTATCAGTG+TGG | + | chr2_1:11693970-11693989 | Msa0195050:intron | 30.0% |
| TCCTTAAGATCAAATTTCCT+TGG | + | chr2_1:11694018-11694037 | Msa0195050:intron | 30.0% | |
| TCCAAGGAAATTTGATCTTA+AGG | - | chr2_1:11694022-11694041 | None:intergenic | 30.0% | |
| ACAAAGTTCACTATCTATGA+CGG | + | chr2_1:11694042-11694061 | Msa0195050:CDS | 30.0% | |
| TTACTAAAAGTCGTTCTACT+AGG | + | chr2_1:11694091-11694110 | Msa0195050:CDS | 30.0% | |
| !! | CTTACTTTTATCACAACGAT+CGG | + | chr2_1:11694328-11694347 | Msa0195050:intron | 30.0% |
| ACTATCTATATATTGCAAGC+AGG | + | chr2_1:11694592-11694611 | Msa0195050:intron | 30.0% | |
| CTATCTATATATTGCAAGCA+GGG | + | chr2_1:11694593-11694612 | Msa0195050:intron | 30.0% | |
| TATCTATATATTGCAAGCAG+GGG | + | chr2_1:11694594-11694613 | Msa0195050:intron | 30.0% | |
| TATGCTTGTGTTGAAAAACA+AGG | + | chr2_1:11694812-11694831 | Msa0195050:CDS | 30.0% | |
| !! | TGTTGGTGCTTAAATTTTCA+TGG | + | chr2_1:11694861-11694880 | Msa0195050:CDS | 30.0% |
| GACAAGATTATTCTGCAATT+TGG | + | chr2_1:11694960-11694979 | Msa0195050:CDS | 30.0% | |
| ATTCTGCAATTTGGAAAAGT+TGG | + | chr2_1:11694969-11694988 | Msa0195050:CDS | 30.0% | |
| TTCTGCAATTTGGAAAAGTT+GGG | + | chr2_1:11694970-11694989 | Msa0195050:CDS | 30.0% | |
| ! | GAATAAGAGCATGTTTAAAC+AGG | + | chr2_1:11695086-11695105 | Msa0195050:exon | 30.0% |
| !!! | TGAGCAAATACATTTTGGTT+TGG | + | chr2_1:11695180-11695199 | Msa0195050:intron | 30.0% |
| GCATAAGATTACAAAAAGAG+AGG | - | chr2_1:11695330-11695349 | None:intergenic | 30.0% | |
| TTTGGTAGACAGACTAAAAT+AGG | - | chr2_1:11695422-11695441 | None:intergenic | 30.0% | |
| ! | GTTTATATCAAACCCTTTTC+TGG | + | chr2_1:11695454-11695473 | Msa0195050:intron | 30.0% |
| !! | CCCTTTTCTGGTATTTATAA+TGG | + | chr2_1:11695466-11695485 | Msa0195050:intron | 30.0% |
| GCCATTATAAATACCAGAAA+AGG | - | chr2_1:11695470-11695489 | None:intergenic | 30.0% | |
| AGATTTAAAGGTCAACTGTT+TGG | - | chr2_1:11695607-11695626 | None:intergenic | 30.0% | |
| TAACTCAGAAACTTAGGATT+TGG | + | chr2_1:11695696-11695715 | Msa0195050:intron | 30.0% | |
| AGATAACAGGTACAATCTTA+TGG | - | chr2_1:11695948-11695967 | None:intergenic | 30.0% | |
| !! | TTTGGTTCAATTTTAATGCC+AGG | + | chr2_1:11696030-11696049 | Msa0195050:intron | 30.0% |
| GTTCTACTGAATCCATAATA+AGG | + | chr2_1:11696151-11696170 | Msa0195050:three_prime_UTR | 30.0% | |
| GGAATAATTTACACGAATGA+AGG | - | chr2_1:11696245-11696264 | None:intergenic | 30.0% | |
| AGAATTTATGTACAGCACAA+GGG | - | chr2_1:11696267-11696286 | None:intergenic | 30.0% | |
| AAGAATTTATGTACAGCACA+AGG | - | chr2_1:11696268-11696287 | None:intergenic | 30.0% | |
| AGTTAAAGGTAGGTACATGA+TGG | - | chr2_1:11691239-11691258 | None:intergenic | 35.0% | |
| AGAGACAAGAAGTTAAAGGT+AGG | - | chr2_1:11691249-11691268 | None:intergenic | 35.0% | |
| TGGAAGAGACAAGAAGTTAA+AGG | - | chr2_1:11691253-11691272 | None:intergenic | 35.0% | |
| ACACATGAGATAAGAAGAGT+TGG | - | chr2_1:11691273-11691292 | None:intergenic | 35.0% | |
| TATGATTGTGTGTGAAGAAG+AGG | - | chr2_1:11691341-11691360 | None:intergenic | 35.0% | |
| GATTTGTCTGAGAAAGGAAA+AGG | - | chr2_1:11691388-11691407 | None:intergenic | 35.0% | |
| GGGAAGATTGTGATGAAAAA+AGG | - | chr2_1:11691443-11691462 | None:intergenic | 35.0% | |
| !! | AAAAGTGTTGCGTTGATTGA+GGG | - | chr2_1:11691542-11691561 | None:intergenic | 35.0% |
| !! | TAAAAGTGTTGCGTTGATTG+AGG | - | chr2_1:11691543-11691562 | None:intergenic | 35.0% |
| TCATGTCTTCGATTATGTTG+CGG | - | chr2_1:11691663-11691682 | None:intergenic | 35.0% | |
| GTGATCATAGCTGAAATTTC+AGG | - | chr2_1:11691913-11691932 | None:intergenic | 35.0% | |
| TTTCCCCATTTCTGTTAAAC+AGG | + | chr2_1:11691933-11691952 | Msa0195050:CDS | 35.0% | |
| TTTCTATCGCTTTCCTCATA+TGG | + | chr2_1:11691978-11691997 | Msa0195050:intron | 35.0% | |
| TTCTATCGCTTTCCTCATAT+GGG | + | chr2_1:11691979-11691998 | Msa0195050:intron | 35.0% | |
| !! | TTTTGACTACAACCCATATG+AGG | - | chr2_1:11691994-11692013 | None:intergenic | 35.0% |
| TGTAAAGGACCAAAATGTGT+TGG | + | chr2_1:11692159-11692178 | Msa0195050:intron | 35.0% | |
| ! | CAACCAAATCCAACACATTT+TGG | - | chr2_1:11692171-11692190 | None:intergenic | 35.0% |
| CATAACTTTCGCAACTACAA+TGG | - | chr2_1:11692462-11692481 | None:intergenic | 35.0% | |
| ! | AAACGTTCTTTTTCTCAGTG+TGG | + | chr2_1:11692667-11692686 | Msa0195050:intron | 35.0% |
| !!! | AAATGACCAGGTTTTGTTTC+TGG | + | chr2_1:11692896-11692915 | Msa0195050:intron | 35.0% |
| TCAAATACTCCTCTTACTAC+AGG | + | chr2_1:11692961-11692980 | Msa0195050:intron | 35.0% | |
| ! | TGAGATATCATCTACTGGTT+TGG | + | chr2_1:11693043-11693062 | Msa0195050:intron | 35.0% |
| ACACTGACACTTCATATTGA+AGG | + | chr2_1:11693105-11693124 | Msa0195050:intron | 35.0% | |
| CACAAACAAGGGAATCTTAA+GGG | - | chr2_1:11693417-11693436 | None:intergenic | 35.0% | |
| GAATATGACTATGTTGTGGA+AGG | + | chr2_1:11693453-11693472 | Msa0195050:intron | 35.0% | |
| TTCGCCAATAGAAACATGTT+AGG | - | chr2_1:11693566-11693585 | None:intergenic | 35.0% | |
| !! | TGCGCTTTATAAAGCATTGA+AGG | - | chr2_1:11693621-11693640 | None:intergenic | 35.0% |
| AATGCTTTATAAAGCGCAAC+CGG | + | chr2_1:11693623-11693642 | Msa0195050:CDS | 35.0% | |
| AGAAGCAATGACCAAAATGA+AGG | - | chr2_1:11693767-11693786 | None:intergenic | 35.0% | |
| ACAACTATGTTGGGAAATTG+AGG | + | chr2_1:11693904-11693923 | Msa0195050:CDS | 35.0% | |
| AGATAGTGAACTTTGTTCCA+AGG | - | chr2_1:11694038-11694057 | None:intergenic | 35.0% | |
| TAAAAGTCGTTCTACTAGGT+TGG | + | chr2_1:11694095-11694114 | Msa0195050:intron | 35.0% | |
| AATTAAATGTGCTAGGCTCT+AGG | + | chr2_1:11694184-11694203 | Msa0195050:intron | 35.0% | |
| CGATCGTTGTGATAAAAGTA+AGG | - | chr2_1:11694330-11694349 | None:intergenic | 35.0% | |
| CGGTAAGCTAAATAGTTTAC+GGG | - | chr2_1:11694540-11694559 | None:intergenic | 35.0% | |
| GCGGTAAGCTAAATAGTTTA+CGG | - | chr2_1:11694541-11694560 | None:intergenic | 35.0% | |
| ATCTATATATTGCAAGCAGG+GGG | + | chr2_1:11694595-11694614 | Msa0195050:intron | 35.0% | |
| AGAGAAAACTCAGTTTGTGT+AGG | - | chr2_1:11694687-11694706 | None:intergenic | 35.0% | |
| GATCGGAAAAAAGGAAACAA+GGG | - | chr2_1:11694729-11694748 | None:intergenic | 35.0% | |
| TGATCGGAAAAAAGGAAACA+AGG | - | chr2_1:11694730-11694749 | None:intergenic | 35.0% | |
| !! | CCACACGATTTGATTTTGAT+CGG | - | chr2_1:11694746-11694765 | None:intergenic | 35.0% |
| ! | GGTGCTTAAATTTTCATGGA+CGG | + | chr2_1:11694865-11694884 | Msa0195050:CDS | 35.0% |
| ! | GTGCTTAAATTTTCATGGAC+GGG | + | chr2_1:11694866-11694885 | Msa0195050:CDS | 35.0% |
| AGAATAATCTTGTCGTGTTC+CGG | - | chr2_1:11694954-11694973 | None:intergenic | 35.0% | |
| ! | TGGGAAGGATTTGTTTACAA+TGG | + | chr2_1:11694989-11695008 | Msa0195050:CDS | 35.0% |
| CTCTTATTCACAAGCAATCT+TGG | - | chr2_1:11695075-11695094 | None:intergenic | 35.0% | |
| !! | TGGTAGCTTTAAGTAGTGTT+TGG | + | chr2_1:11695252-11695271 | Msa0195050:intron | 35.0% |
| GGATAAGGCTTAATTGTTGT+TGG | - | chr2_1:11695509-11695528 | None:intergenic | 35.0% | |
| ! | ACAATTAAGCCTTATCCCAT+TGG | + | chr2_1:11695512-11695531 | Msa0195050:intron | 35.0% |
| ! | CAATTAAGCCTTATCCCATT+GGG | + | chr2_1:11695513-11695532 | Msa0195050:intron | 35.0% |
| TCAAAATATGCAGCGGTATT+GGG | - | chr2_1:11695788-11695807 | None:intergenic | 35.0% | |
| ATCAAAATATGCAGCGGTAT+TGG | - | chr2_1:11695789-11695808 | None:intergenic | 35.0% | |
| GAAATTCCGATCGTGAAATT+TGG | + | chr2_1:11695821-11695840 | Msa0195050:intron | 35.0% | |
| GACAATCCAAATTTCACGAT+CGG | - | chr2_1:11695830-11695849 | None:intergenic | 35.0% | |
| AACAGGTACAATCTTATGGA+TGG | - | chr2_1:11695944-11695963 | None:intergenic | 35.0% | |
| TCTCAGATTGTGATCTAATC+TGG | - | chr2_1:11696062-11696081 | None:intergenic | 35.0% | |
| ! | TATGTTTGAATGTCACTTGG+TGG | + | chr2_1:11696084-11696103 | Msa0195050:three_prime_UTR | 35.0% |
| ! | ATGTTTGAATGTCACTTGGT+GGG | + | chr2_1:11696085-11696104 | Msa0195050:three_prime_UTR | 35.0% |
| GAATTTATGTACAGCACAAG+GGG | - | chr2_1:11696266-11696285 | None:intergenic | 35.0% | |
| AGCACATAGGATCTCAAAGT+GGG | - | chr2_1:11691190-11691209 | None:intergenic | 40.0% | |
| ! | GATGGTTGGTTGTTTCAAGA+TGG | - | chr2_1:11691221-11691240 | None:intergenic | 40.0% |
| AAAGGTAGGTACATGATGGT+TGG | - | chr2_1:11691235-11691254 | None:intergenic | 40.0% | |
| !! | AAAGTGTTGCGTTGATTGAG+GGG | - | chr2_1:11691541-11691560 | None:intergenic | 40.0% |
| CAGATCGCCAATTTCGATTT+CGG | - | chr2_1:11691626-11691645 | None:intergenic | 40.0% | |
| GAAATCGAAATTGGCGATCT+GGG | + | chr2_1:11691625-11691644 | Msa0195050:five_prime_UTR | 40.0% | |
| ATCAAGATCGCAAAGAGTAG+TGG | + | chr2_1:11691684-11691703 | Msa0195050:CDS | 40.0% | |
| TGAAGTTCTTCTCCGAATTG+AGG | + | chr2_1:11691792-11691811 | Msa0195050:CDS | 40.0% | |
| GGACCAAAATGTGTTGGATT+TGG | + | chr2_1:11692165-11692184 | Msa0195050:intron | 40.0% | |
| !! | CAACTACAATGGCATCGATA+AGG | - | chr2_1:11692451-11692470 | None:intergenic | 40.0% |
| GTAAACATACACAGAGGAAC+AGG | - | chr2_1:11692582-11692601 | None:intergenic | 40.0% | |
| TCTGCGTGTGATTCTCTATT+AGG | + | chr2_1:11693014-11693033 | Msa0195050:intron | 40.0% | |
| GTGTGATTCTCTATTAGGCT+TGG | + | chr2_1:11693019-11693038 | Msa0195050:intron | 40.0% | |
| TTGGCTGAGATATCATCTAC+TGG | + | chr2_1:11693038-11693057 | Msa0195050:intron | 40.0% | |
| !! | TATCATCTACTGGTTTGGCT+AGG | + | chr2_1:11693048-11693067 | Msa0195050:intron | 40.0% |
| TCCTAACCAAAAAGTAGGAG+AGG | + | chr2_1:11693320-11693339 | Msa0195050:intron | 40.0% | |
| !!! | ACCTCTCCTACTTTTTGGTT+AGG | - | chr2_1:11693324-11693343 | None:intergenic | 40.0% |
| !! | ACTGTTTTGGGCTAATTGAG+TGG | + | chr2_1:11693345-11693364 | Msa0195050:intron | 40.0% |
| !! | CTGTTTTGGGCTAATTGAGT+GGG | + | chr2_1:11693346-11693365 | Msa0195050:intron | 40.0% |
| !! | AACACCAAAGAGGCATCTTA+TGG | - | chr2_1:11693374-11693393 | None:intergenic | 40.0% |
| CCACAAACAAGGGAATCTTA+AGG | - | chr2_1:11693418-11693437 | None:intergenic | 40.0% | |
| ! | CCTTAAGATTCCCTTGTTTG+TGG | + | chr2_1:11693415-11693434 | Msa0195050:intron | 40.0% |
| ! | AAGATTCCCTTGTTTGTGGA+AGG | + | chr2_1:11693419-11693438 | Msa0195050:intron | 40.0% |
| ! | AGATTCCCTTGTTTGTGGAA+GGG | + | chr2_1:11693420-11693439 | Msa0195050:intron | 40.0% |
| TGCTTCTTTAATTCAGCGCT+AGG | + | chr2_1:11693780-11693799 | Msa0195050:intron | 40.0% | |
| ! | GTAAATTTTGCTCCTGCATG+AGG | - | chr2_1:11694075-11694094 | None:intergenic | 40.0% |
| !! | TAGGTTGGTGAATCTAAAGC+AGG | + | chr2_1:11694110-11694129 | Msa0195050:intron | 40.0% |
| GGTAAAGTCACACAGATGAT+GGG | + | chr2_1:11694349-11694368 | Msa0195050:intron | 40.0% | |
| ATAGTTTACGGGTAACGCTT+TGG | - | chr2_1:11694529-11694548 | None:intergenic | 40.0% | |
| TTCGATTGAAGAGGATGGAA+TGG | - | chr2_1:11694649-11694668 | None:intergenic | 40.0% | |
| CCGATCAAAATCAAATCGTG+TGG | + | chr2_1:11694743-11694762 | Msa0195050:CDS | 40.0% | |
| ! | TCTCTTTTATCGCCAACAAG+AGG | - | chr2_1:11694789-11694808 | None:intergenic | 40.0% |
| CTTGTTGGCGATAAAAGAGA+TGG | + | chr2_1:11694789-11694808 | Msa0195050:CDS | 40.0% | |
| ! | CAGCTGAAAGTTTTTAACCG+AGG | - | chr2_1:11694901-11694920 | None:intergenic | 40.0% |
| CTCGGTTAAAAACTTTCAGC+TGG | + | chr2_1:11694899-11694918 | Msa0195050:CDS | 40.0% | |
| GGTTAAAAACTTTCAGCTGG+TGG | + | chr2_1:11694902-11694921 | Msa0195050:CDS | 40.0% | |
| GCAATTTGGAAAAGTTGGGA+AGG | + | chr2_1:11694974-11694993 | Msa0195050:CDS | 40.0% | |
| GGATTTCCGATACCCTATTT+CGG | + | chr2_1:11695010-11695029 | Msa0195050:CDS | 40.0% | |
| GAAATGCCGAAATAGGGTAT+CGG | - | chr2_1:11695019-11695038 | None:intergenic | 40.0% | |
| ATACCCTATTTCGGCATTTC+AGG | + | chr2_1:11695019-11695038 | Msa0195050:CDS | 40.0% | |
| ATGCCTGAAATGCCGAAATA+GGG | - | chr2_1:11695025-11695044 | None:intergenic | 40.0% | |
| AATGCCTGAAATGCCGAAAT+AGG | - | chr2_1:11695026-11695045 | None:intergenic | 40.0% | |
| ! | TGGCAAATTGTGTCACTATG+TGG | + | chr2_1:11695200-11695219 | Msa0195050:intron | 40.0% |
| ! | ATTGTGTCACTATGTGGCAA+TGG | + | chr2_1:11695206-11695225 | Msa0195050:intron | 40.0% |
| GGAGGATAACTCAGAAACTT+AGG | + | chr2_1:11695690-11695709 | Msa0195050:intron | 40.0% | |
| ACCATCTGATCTCGATCTAA+TGG | - | chr2_1:11695765-11695784 | None:intergenic | 40.0% | |
| GATCTAATCTGGATTGAACC+TGG | - | chr2_1:11696051-11696070 | None:intergenic | 40.0% | |
| !! | ACGAGTTTTCAGCTAGTTTC+TGG | + | chr2_1:11696182-11696201 | Msa0195050:three_prime_UTR | 40.0% |
| GAGCACATAGGATCTCAAAG+TGG | - | chr2_1:11691191-11691210 | None:intergenic | 45.0% | |
| ! | TGGTTGTTTCAAGATGGTGG+AGG | - | chr2_1:11691215-11691234 | None:intergenic | 45.0% |
| ! | GGTTGGTTGTTTCAAGATGG+TGG | - | chr2_1:11691218-11691237 | None:intergenic | 45.0% |
| TGTTGTTGAGAGAGAGAGAG+AGG | - | chr2_1:11691309-11691328 | None:intergenic | 45.0% | |
| GATTGTGTGTGAAGAAGAGG+TGG | - | chr2_1:11691338-11691357 | None:intergenic | 45.0% | |
| GAGAAAGGAAAAGGGTGAGA+AGG | - | chr2_1:11691379-11691398 | None:intergenic | 45.0% | |
| GGTGGAACCGAAATCGAAAT+TGG | + | chr2_1:11691616-11691635 | Msa0195050:five_prime_UTR | 45.0% | |
| CGAAATCGAAATTGGCGATC+TGG | + | chr2_1:11691624-11691643 | Msa0195050:five_prime_UTR | 45.0% | |
| AAGATCGCAAAGAGTAGTGG+TGG | + | chr2_1:11691687-11691706 | Msa0195050:CDS | 45.0% | |
| ACAGTTTACGGCAGAGTTGT+TGG | + | chr2_1:11691743-11691762 | Msa0195050:CDS | 45.0% | |
| CAGTTTACGGCAGAGTTGTT+GGG | + | chr2_1:11691744-11691763 | Msa0195050:CDS | 45.0% | |
| ! | ACCTAACCAACGTTTAGCTC+CGG | + | chr2_1:11692990-11693009 | Msa0195050:intron | 45.0% |
| ! | CTTCATATTGAAGGTGTGCC+CGG | + | chr2_1:11693114-11693133 | Msa0195050:intron | 45.0% |
| !! | TGTCGGTGTCATGTTGTTGT+CGG | - | chr2_1:11693143-11693162 | None:intergenic | 45.0% |
| !! | CAGTGACCTCTCCTACTTTT+TGG | - | chr2_1:11693329-11693348 | None:intergenic | 45.0% |
| ! | AGTAGGAGAGGTCACTGTTT+TGG | + | chr2_1:11693332-11693351 | Msa0195050:intron | 45.0% |
| ! | GTAGGAGAGGTCACTGTTTT+GGG | + | chr2_1:11693333-11693352 | Msa0195050:intron | 45.0% |
| TCATGCCCTTCCACAAACAA+GGG | - | chr2_1:11693428-11693447 | None:intergenic | 45.0% | |
| ATCATGCCCTTCCACAAACA+AGG | - | chr2_1:11693429-11693448 | None:intergenic | 45.0% | |
| CATTGAAGGAGATTCTCCCT+TGG | - | chr2_1:11693607-11693626 | None:intergenic | 45.0% | |
| AATTCAGCGCTAGGTGATGA+CGG | + | chr2_1:11693789-11693808 | Msa0195050:intron | 45.0% | |
| TAGACGCAGATGATATGTCC+AGG | + | chr2_1:11693874-11693893 | Msa0195050:CDS | 45.0% | |
| AGACGCAGATGATATGTCCA+GGG | + | chr2_1:11693875-11693894 | Msa0195050:CDS | 45.0% | |
| ! | AACATAGTTGTTGCTTCCCC+TGG | - | chr2_1:11693895-11693914 | None:intergenic | 45.0% |
| AGGGGAAGCAACAACTATGT+TGG | + | chr2_1:11693894-11693913 | Msa0195050:CDS | 45.0% | |
| GGGGAAGCAACAACTATGTT+GGG | + | chr2_1:11693895-11693914 | Msa0195050:CDS | 45.0% | |
| ! | AATTTTGCTCCTGCATGAGG+TGG | - | chr2_1:11694072-11694091 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGGTTTCACCCA+AGG | + | chr2_1:11694122-11694141 | Msa0195050:intron | 45.0% |
| TCATATGAGATGTGAGCCAC+TGG | - | chr2_1:11694165-11694184 | None:intergenic | 45.0% | |
| CGGTAAAGTCACACAGATGA+TGG | + | chr2_1:11694348-11694367 | Msa0195050:intron | 45.0% | |
| ACCGCGCACTCTTCATATAT+TGG | + | chr2_1:11694556-11694575 | Msa0195050:intron | 45.0% | |
| ! | GCCAATATATGAAGAGTGCG+CGG | - | chr2_1:11694560-11694579 | None:intergenic | 45.0% |
| ATGACACAGTGCATTCTCCT+TGG | - | chr2_1:11694621-11694640 | None:intergenic | 45.0% | |
| AAGGAGAATGCACTGTGTCA+TGG | + | chr2_1:11694620-11694639 | Msa0195050:CDS | 45.0% | |
| GTGGTAGAGAACTCTCTATC+CGG | + | chr2_1:11694762-11694781 | Msa0195050:CDS | 45.0% | |
| TTTATCGCCAACAAGAGGTC+CGG | - | chr2_1:11694784-11694803 | None:intergenic | 45.0% | |
| TGTTGAAAAACAAGGCTCCG+AGG | + | chr2_1:11694820-11694839 | Msa0195050:CDS | 45.0% | |
| TCTGCAGAAAATGGAACAGC+TGG | + | chr2_1:11694927-11694946 | Msa0195050:CDS | 45.0% | |
| AGAAAATGGAACAGCTGGAC+CGG | + | chr2_1:11694932-11694951 | Msa0195050:CDS | 45.0% | |
| TCTTGGTATCAAAGCTGCTG+AGG | - | chr2_1:11695058-11695077 | None:intergenic | 45.0% | |
| ! | TAAGCCTTATCCCATTGGGT+AGG | + | chr2_1:11695517-11695536 | Msa0195050:intron | 45.0% |
| ! | AAGCCTTATCCCATTGGGTA+GGG | + | chr2_1:11695518-11695537 | Msa0195050:intron | 45.0% |
| ACGGGCAGCAAACGAATAAT+AGG | - | chr2_1:11695656-11695675 | None:intergenic | 45.0% | |
| GCCATTAGATCGAGATCAGA+TGG | + | chr2_1:11695761-11695780 | Msa0195050:intron | 45.0% | |
| CATTCACGCAATCAGCATGT+CGG | - | chr2_1:11695873-11695892 | None:intergenic | 45.0% | |
| ! | ATGCTGATTGCGTGAATGTG+TGG | + | chr2_1:11695875-11695894 | Msa0195050:intron | 45.0% |
| TCGTGTGCAGCACCTTATTA+TGG | - | chr2_1:11696166-11696185 | None:intergenic | 45.0% | |
| CGAAATTGGCGATCTGGGTA+TGG | + | chr2_1:11691630-11691649 | Msa0195050:exon | 50.0% | |
| ATCGCAAAGAGTAGTGGTGG+TGG | + | chr2_1:11691690-11691709 | Msa0195050:CDS | 50.0% | |
| GGAGAAGGAAGAGAAAGTGG+CGG | + | chr2_1:11691714-11691733 | Msa0195050:CDS | 50.0% | |
| AAGGAAGAGAAAGTGGCGGT+TGG | + | chr2_1:11691718-11691737 | Msa0195050:CDS | 50.0% | |
| ACTTCACGCAGAAGCTCTTG+TGG | - | chr2_1:11691778-11691797 | None:intergenic | 50.0% | |
| TCTTCTCCGAATTGAGGCCT+CGG | + | chr2_1:11691798-11691817 | Msa0195050:CDS | 50.0% | |
| CACGCAACAACGTTCTTCCT+CGG | - | chr2_1:11691838-11691857 | None:intergenic | 50.0% | |
| AAGAACGTTGTTGCGTGTGC+TGG | + | chr2_1:11691841-11691860 | Msa0195050:CDS | 50.0% | |
| GGTAAGCGTCCTGTAGTAAG+AGG | - | chr2_1:11692973-11692992 | None:intergenic | 50.0% | |
| TAGAGAATCACACGCAGAGC+CGG | - | chr2_1:11693012-11693031 | None:intergenic | 50.0% | |
| TCATGTTGTTGTCGGACACC+GGG | - | chr2_1:11693135-11693154 | None:intergenic | 50.0% | |
| GTCATGTTGTTGTCGGACAC+CGG | - | chr2_1:11693136-11693155 | None:intergenic | 50.0% | |
| GGCTCCATAAGATGCCTCTT+TGG | + | chr2_1:11693367-11693386 | Msa0195050:intron | 50.0% | |
| !! | GGCGAATAATTTTGGCAGCC+TGG | + | chr2_1:11693580-11693599 | Msa0195050:intron | 50.0% |
| !! | AATTTTGGCAGCCTGGTCCA+AGG | + | chr2_1:11693587-11693606 | Msa0195050:intron | 50.0% |
| !! | ATTTTGGCAGCCTGGTCCAA+GGG | + | chr2_1:11693588-11693607 | Msa0195050:intron | 50.0% |
| ATTCAGCGCTAGGTGATGAC+GGG | + | chr2_1:11693790-11693809 | Msa0195050:intron | 50.0% | |
| !! | TGATGACGGGAAGTTCCTTC+TGG | + | chr2_1:11693803-11693822 | Msa0195050:CDS | 50.0% |
| TACATTTGCGTGCAGCCAGA+AGG | - | chr2_1:11693821-11693840 | None:intergenic | 50.0% | |
| GACGCAGATGATATGTCCAG+GGG | + | chr2_1:11693876-11693895 | Msa0195050:CDS | 50.0% | |
| TAGTTGCCTGTTGGGACCTT+GGG | - | chr2_1:11694141-11694160 | None:intergenic | 50.0% | |
| ATAGTTGCCTGTTGGGACCT+TGG | - | chr2_1:11694142-11694161 | None:intergenic | 50.0% | |
| CCACTGGATAGTTGCCTGTT+GGG | - | chr2_1:11694149-11694168 | None:intergenic | 50.0% | |
| ! | CCTGGTTCGATTGAAGAGGA+TGG | - | chr2_1:11694654-11694673 | None:intergenic | 50.0% |
| CCATCCTCTTCAATCGAACC+AGG | + | chr2_1:11694651-11694670 | Msa0195050:CDS | 50.0% | |
| TCCTCTTCAATCGAACCAGG+TGG | + | chr2_1:11694654-11694673 | Msa0195050:CDS | 50.0% | |
| TCTCTATCCGGACCTCTTGT+TGG | + | chr2_1:11694774-11694793 | Msa0195050:CDS | 50.0% | |
| TGAAAAACAAGGCTCCGAGG+TGG | + | chr2_1:11694823-11694842 | Msa0195050:CDS | 50.0% | |
| CTGGTGGCTTCTGCAGAAAA+TGG | + | chr2_1:11694918-11694937 | Msa0195050:CDS | 50.0% | |
| AGACCCTACCCAATGGGATA+AGG | - | chr2_1:11695524-11695543 | None:intergenic | 50.0% | |
| TGTAGCAGACCCTACCCAAT+GGG | - | chr2_1:11695530-11695549 | None:intergenic | 50.0% | |
| ATGTAGCAGACCCTACCCAA+TGG | - | chr2_1:11695531-11695550 | None:intergenic | 50.0% | |
| ! | TTATTCGTTTGCTGCCCGTG+AGG | + | chr2_1:11695657-11695676 | Msa0195050:intron | 50.0% |
| TGCCCGTGAGGATAAACAGT+GGG | + | chr2_1:11695669-11695688 | Msa0195050:intron | 50.0% | |
| CTCCCACTGTTTATCCTCAC+GGG | - | chr2_1:11695674-11695693 | None:intergenic | 50.0% | |
| CCTCCCACTGTTTATCCTCA+CGG | - | chr2_1:11695675-11695694 | None:intergenic | 50.0% | |
| ATTCCATGCAGTCAGCACGT+TGG | + | chr2_1:11695736-11695755 | Msa0195050:intron | 50.0% | |
| !! | GATGGTGGAGGAGAGCACAT+AGG | - | chr2_1:11691203-11691222 | None:intergenic | 55.0% |
| !! | GCAAAGAGTAGTGGTGGTGG+CGG | + | chr2_1:11691693-11691712 | Msa0195050:CDS | 55.0% |
| GGCGGAGAAGGAAGAGAAAG+TGG | + | chr2_1:11691711-11691730 | Msa0195050:CDS | 55.0% | |
| TGGCGGTTGGCGACAGTTTA+CGG | + | chr2_1:11691731-11691750 | Msa0195050:CDS | 55.0% | |
| TGTCCTCCGAGGCCTCAATT+CGG | - | chr2_1:11691807-11691826 | None:intergenic | 55.0% | |
| GCAACAACGTTCTTCCTCGG+CGG | - | chr2_1:11691835-11691854 | None:intergenic | 55.0% | |
| TTGCGTGTGCTGGAGTGTGT+AGG | + | chr2_1:11691851-11691870 | Msa0195050:CDS | 55.0% | |
| GTGCTGGAGTGTGTAGGAGT+TGG | + | chr2_1:11691857-11691876 | Msa0195050:CDS | 55.0% | |
| ! | GCCGGAGCTAAACGTTGGTT+AGG | - | chr2_1:11692994-11693013 | None:intergenic | 55.0% |
| AGACACTAACACGTCGACGC+CGG | - | chr2_1:11693204-11693223 | None:intergenic | 55.0% | |
| AGGAGATTCTCCCTTGGACC+AGG | - | chr2_1:11693601-11693620 | None:intergenic | 55.0% | |
| GTTTCACCCAAGGTCCCAAC+AGG | + | chr2_1:11694132-11694151 | Msa0195050:intron | 55.0% | |
| CCCAACAGGCAACTATCCAG+TGG | + | chr2_1:11694146-11694165 | Msa0195050:intron | 55.0% | |
| GCCACTGGATAGTTGCCTGT+TGG | - | chr2_1:11694150-11694169 | None:intergenic | 55.0% | |
| ATATTGCAAGCAGGGGGCCA+AGG | + | chr2_1:11694601-11694620 | Msa0195050:intron | 55.0% | |
| ! | GCCACCTGGTTCGATTGAAG+AGG | - | chr2_1:11694658-11694677 | None:intergenic | 55.0% |
| TGGACGGGTGACAATTGCCT+CGG | + | chr2_1:11694881-11694900 | Msa0195050:CDS | 55.0% | |
| CTGCCCGTGAGGATAAACAG+TGG | + | chr2_1:11695668-11695687 | Msa0195050:intron | 55.0% | |
| CCGTGAGGATAAACAGTGGG+AGG | + | chr2_1:11695672-11695691 | Msa0195050:intron | 55.0% | |
| ATCAGCATGTCGGTGGTCGT+TGG | - | chr2_1:11695863-11695882 | None:intergenic | 55.0% | |
| TCACGCAATCAGCATGTCGG+TGG | - | chr2_1:11695870-11695889 | None:intergenic | 55.0% | |
| !! | AGTAGTGGTGGTGGCGGAGA+AGG | + | chr2_1:11691699-11691718 | Msa0195050:CDS | 60.0% |
| TCTCCGAATTGAGGCCTCGG+AGG | + | chr2_1:11691801-11691820 | Msa0195050:CDS | 60.0% | |
| GCAGAGCCGGAGCTAAACGT+TGG | - | chr2_1:11692999-11693018 | None:intergenic | 60.0% | |
| TTGCTCCTGCATGAGGTGGC+TGG | - | chr2_1:11694068-11694087 | None:intergenic | 60.0% | |
| TGTGTAGGAGCTACGCCACC+TGG | - | chr2_1:11694672-11694691 | None:intergenic | 60.0% | |
| TGCAGCTGCTCATGCCACCT+CGG | - | chr2_1:11694840-11694859 | None:intergenic | 60.0% | |
| GGCATGAGCAGCTGCAGTGT+TGG | + | chr2_1:11694844-11694863 | Msa0195050:CDS | 60.0% | |
| !! | CCACCAACGTGCTGACTGCA+TGG | - | chr2_1:11695742-11695761 | None:intergenic | 60.0% |
| CCATGCAGTCAGCACGTTGG+TGG | + | chr2_1:11695739-11695758 | Msa0195050:intron | 60.0% | |
| TTGAGGCCTCGGAGGACACG+TGG | + | chr2_1:11691809-11691828 | Msa0195050:CDS | 65.0% | |
| GACGGCCAGCCACCTCATGC+AGG | + | chr2_1:11694060-11694079 | Msa0195050:CDS | 70.0% | |
| ! | CGGCGGCCACGTGTCCTCCG+AGG | - | chr2_1:11691818-11691837 | None:intergenic | 80.0% |
| ! | CGGAGGACACGTGGCCGCCG+AGG | + | chr2_1:11691818-11691837 | Msa0195050:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 11691166 | 11696426 | 11691166 | ID=Msa0195050;Name=Msa0195050 |
| chr2_1 | mRNA | 11691166 | 11696426 | 11691166 | ID=Msa0195050-mRNA-1;Parent=Msa0195050;Name=Msa0195050-mRNA-1;_AED=0.15;_eAED=0.15;_QI=483|0.8|0.83|1|0.8|0.66|6|391|362 |
| chr2_1 | exon | 11691166 | 11691954 | 11691166 | ID=Msa0195050-mRNA-1:exon:5175;Parent=Msa0195050-mRNA-1 |
| chr2_1 | exon | 11693598 | 11693685 | 11693598 | ID=Msa0195050-mRNA-1:exon:5176;Parent=Msa0195050-mRNA-1 |
| chr2_1 | exon | 11693796 | 11693925 | 11693796 | ID=Msa0195050-mRNA-1:exon:5177;Parent=Msa0195050-mRNA-1 |
| chr2_1 | exon | 11694026 | 11694112 | 11694026 | ID=Msa0195050-mRNA-1:exon:5178;Parent=Msa0195050-mRNA-1 |
| chr2_1 | exon | 11694614 | 11695107 | 11694614 | ID=Msa0195050-mRNA-1:exon:5179;Parent=Msa0195050-mRNA-1 |
| chr2_1 | exon | 11696052 | 11696426 | 11696052 | ID=Msa0195050-mRNA-1:exon:5180;Parent=Msa0195050-mRNA-1 |
| chr2_1 | five_prime_UTR | 11691166 | 11691648 | 11691166 | ID=Msa0195050-mRNA-1:five_prime_utr;Parent=Msa0195050-mRNA-1 |
| chr2_1 | CDS | 11691649 | 11691954 | 11691649 | ID=Msa0195050-mRNA-1:cds;Parent=Msa0195050-mRNA-1 |
| chr2_1 | CDS | 11693598 | 11693685 | 11693598 | ID=Msa0195050-mRNA-1:cds;Parent=Msa0195050-mRNA-1 |
| chr2_1 | CDS | 11693796 | 11693925 | 11693796 | ID=Msa0195050-mRNA-1:cds;Parent=Msa0195050-mRNA-1 |
| chr2_1 | CDS | 11694026 | 11694112 | 11694026 | ID=Msa0195050-mRNA-1:cds;Parent=Msa0195050-mRNA-1 |
| chr2_1 | CDS | 11694614 | 11695091 | 11694614 | ID=Msa0195050-mRNA-1:cds;Parent=Msa0195050-mRNA-1 |
| chr2_1 | three_prime_UTR | 11695092 | 11695107 | 11695092 | ID=Msa0195050-mRNA-1:three_prime_utr;Parent=Msa0195050-mRNA-1 |
| chr2_1 | three_prime_UTR | 11696052 | 11696426 | 11696052 | ID=Msa0195050-mRNA-1:three_prime_utr;Parent=Msa0195050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
