Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315630 | XP_003594006.1 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315630 | sp|Q10LG8|TLP6_ORYSJ | 65.278 | 360 | 91 | 3 | 34 | 362 | 47 | 403 | 1.59e-173 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0315630 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195050 | Msa0315630 | 0.971272 | 6.662498e-133 | -8.615850e-47 |
| Msa0274920 | Msa0315630 | 0.993674 | 2.123762e-201 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315630 | MtrunA17_Chr2g0286441 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Msa0315630 | MtrunA17_Chr1g0196071 | 62.857 | 385 | 107 | 4 | 11 | 362 | 21 | 402 | 7.89e-175 | 491 |
| Msa0315630 | MtrunA17_Chr2g0278511 | 53.826 | 379 | 125 | 7 | 34 | 362 | 49 | 427 | 5.59e-137 | 396 |
| Msa0315630 | MtrunA17_Chr1g0201891 | 53.385 | 384 | 124 | 7 | 34 | 362 | 48 | 431 | 3.96e-134 | 389 |
| Msa0315630 | MtrunA17_Chr5g0404321 | 52.800 | 375 | 127 | 5 | 32 | 362 | 48 | 416 | 3.45e-131 | 381 |
| Msa0315630 | MtrunA17_Chr8g0373001 | 53.117 | 369 | 133 | 4 | 32 | 362 | 46 | 412 | 7.23e-131 | 380 |
| Msa0315630 | MtrunA17_Chr1g0155301 | 54.722 | 360 | 120 | 5 | 39 | 362 | 70 | 422 | 5.62e-130 | 379 |
| Msa0315630 | MtrunA17_Chr2g0315641 | 49.728 | 368 | 148 | 6 | 16 | 362 | 20 | 371 | 2.37e-118 | 347 |
| Msa0315630 | MtrunA17_Chr2g0315651 | 44.838 | 339 | 164 | 6 | 39 | 362 | 37 | 367 | 6.73e-93 | 282 |
| Msa0315630 | MtrunA17_Chr8g0373361 | 41.322 | 363 | 166 | 8 | 32 | 355 | 51 | 405 | 6.23e-80 | 250 |
| Msa0315630 | MtrunA17_Chr8g0373331 | 35.278 | 360 | 137 | 8 | 32 | 353 | 45 | 346 | 2.54e-61 | 200 |
| Msa0315630 | MtrunA17_Chr1g0156151 | 58.904 | 146 | 56 | 1 | 54 | 195 | 66 | 211 | 1.43e-53 | 176 |
| Msa0315630 | MtrunA17_Chr8g0373341 | 38.507 | 335 | 121 | 10 | 39 | 352 | 50 | 320 | 2.61e-52 | 176 |
| Msa0315630 | MtrunA17_Chr8g0373351 | 32.967 | 364 | 114 | 10 | 32 | 354 | 12 | 286 | 5.88e-47 | 161 |
| Msa0315630 | MtrunA17_Chr3g0091401 | 42.268 | 97 | 50 | 1 | 82 | 178 | 9 | 99 | 1.31e-15 | 72.0 |
| Msa0315630 | MtrunA17_Chr2g0334041 | 27.731 | 238 | 137 | 11 | 134 | 361 | 147 | 359 | 1.61e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315630 | AT2G47900.2 | 64.752 | 383 | 97 | 5 | 12 | 362 | 30 | 406 | 1.85e-173 | 489 |
| Msa0315630 | AT2G47900.1 | 64.752 | 383 | 97 | 5 | 12 | 362 | 30 | 406 | 1.85e-173 | 489 |
| Msa0315630 | AT2G47900.3 | 64.583 | 384 | 97 | 5 | 12 | 362 | 30 | 407 | 2.09e-173 | 488 |
| Msa0315630 | AT3G06380.1 | 55.270 | 389 | 133 | 7 | 4 | 362 | 3 | 380 | 8.73e-143 | 410 |
| Msa0315630 | AT5G18680.1 | 53.750 | 400 | 131 | 9 | 4 | 362 | 3 | 389 | 2.31e-140 | 404 |
| Msa0315630 | AT2G18280.2 | 53.994 | 363 | 125 | 6 | 32 | 362 | 41 | 393 | 3.52e-128 | 373 |
| Msa0315630 | AT2G18280.1 | 53.994 | 363 | 125 | 6 | 32 | 362 | 41 | 393 | 3.52e-128 | 373 |
| Msa0315630 | AT1G47270.3 | 51.515 | 363 | 133 | 5 | 32 | 362 | 37 | 388 | 4.25e-127 | 370 |
| Msa0315630 | AT1G47270.2 | 51.515 | 363 | 133 | 5 | 32 | 362 | 61 | 412 | 6.01e-127 | 371 |
| Msa0315630 | AT1G47270.1 | 51.515 | 363 | 133 | 5 | 32 | 362 | 62 | 413 | 8.06e-127 | 370 |
| Msa0315630 | AT1G43640.1 | 47.901 | 405 | 146 | 10 | 14 | 362 | 34 | 429 | 6.74e-126 | 369 |
| Msa0315630 | AT1G76900.2 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0315630 | AT1G76900.1 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0315630 | AT1G76900.3 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0315630 | AT1G25280.1 | 51.646 | 395 | 122 | 9 | 34 | 362 | 54 | 445 | 3.71e-124 | 365 |
| Msa0315630 | AT1G43640.2 | 49.454 | 366 | 124 | 9 | 53 | 362 | 3 | 363 | 8.52e-119 | 348 |
| Msa0315630 | AT1G53320.1 | 45.736 | 387 | 168 | 6 | 3 | 362 | 8 | 379 | 7.01e-109 | 323 |
| Msa0315630 | AT5G18680.2 | 54.369 | 309 | 89 | 7 | 93 | 362 | 2 | 297 | 1.95e-106 | 314 |
| Msa0315630 | AT3G06380.2 | 56.897 | 290 | 90 | 5 | 102 | 362 | 5 | 288 | 1.31e-104 | 309 |
| Msa0315630 | AT1G25280.3 | 49.259 | 270 | 69 | 8 | 158 | 362 | 1 | 267 | 9.12e-73 | 227 |
| Msa0315630 | AT1G25280.2 | 49.259 | 270 | 69 | 8 | 158 | 362 | 1 | 267 | 9.12e-73 | 227 |
| Msa0315630 | AT1G61940.2 | 68.605 | 86 | 27 | 0 | 42 | 127 | 1 | 86 | 1.50e-36 | 133 |
| Msa0315630 | AT1G61940.1 | 70.492 | 61 | 18 | 0 | 42 | 102 | 1 | 61 | 1.74e-22 | 95.5 |
| Msa0315630 | AT1G61940.1 | 43.564 | 101 | 32 | 5 | 207 | 306 | 102 | 178 | 2.83e-13 | 69.3 |
Find 128 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATCATAGCTGAAATTTC+AGG | 0.195471 | 2_4:+12118277 | None:intergenic |
| GACAAGATTATTCTGCAATT+TGG | 0.212541 | 2_4:-12115227 | Msa0315630:CDS |
| ATACCCTATTTCGGCATTTC+AGG | 0.216986 | 2_4:-12115168 | Msa0315630:CDS |
| TCGTGTGCAGCACCTTATTA+TGG | 0.239324 | 2_4:+12114024 | None:intergenic |
| AATGCCTGAAATGCCGAAAT+AGG | 0.239475 | 2_4:+12115164 | None:intergenic |
| GGTGGAACCGAAATCGAAAT+TGG | 0.239615 | 2_4:-12118571 | Msa0315630:five_prime_UTR |
| TTTCAAAATCAGTAACAAAT+TGG | 0.270566 | 2_4:-12113785 | Msa0315630:three_prime_UTR |
| TGGCGGTTGGCGACAGTTTA+CGG | 0.281341 | 2_4:-12118456 | Msa0315630:CDS |
| CAGATCGCCAATTTCGATTT+CGG | 0.295293 | 2_4:+12118564 | None:intergenic |
| GAAAACCTGTTTAACAGAAA+TGG | 0.297610 | 2_4:+12118249 | None:intergenic |
| CTCTTATTCACAAGCAATCT+TGG | 0.300510 | 2_4:+12115115 | None:intergenic |
| TCTCAGATTGTGATCTAATC+TGG | 0.312471 | 2_4:+12114128 | None:intergenic |
| GTTCTACTGAATCCATAATA+AGG | 0.331885 | 2_4:-12114036 | Msa0315630:three_prime_UTR |
| TGGAAGAGACAAGAAGTTAA+AGG | 0.343035 | 2_4:+12118939 | None:intergenic |
| AAAACCTGTTTAACAGAAAT+GGG | 0.345752 | 2_4:+12118250 | None:intergenic |
| CTTCATAAATACTTTCTCAT+TGG | 0.351432 | 2_4:+12114072 | None:intergenic |
| ATTCTGCAATTTGGAAAAGT+TGG | 0.358632 | 2_4:-12115218 | Msa0315630:CDS |
| TTTCCCCATTTCTGTTAAAC+AGG | 0.366547 | 2_4:-12118254 | Msa0315630:intron |
| GGATTTCCGATACCCTATTT+CGG | 0.372729 | 2_4:-12115177 | Msa0315630:CDS |
| AGTAGTGGTGGTGGCGGAGA+AGG | 0.373376 | 2_4:-12118488 | Msa0315630:CDS |
| CTGGTGGCTTCTGCAGAAAA+TGG | 0.375077 | 2_4:-12115269 | Msa0315630:CDS |
| CGAAATCGAAATTGGCGATC+TGG | 0.382016 | 2_4:-12118563 | Msa0315630:five_prime_UTR |
| TCCTTAAGATCAAATTTCCT+TGG | 0.391394 | 2_4:-12116169 | Msa0315630:intron |
| AACATAGTTGTTGCTTCCCC+TGG | 0.398674 | 2_4:+12116295 | None:intergenic |
| GAATAAGAGCATGTTTAAAC+AGG | 0.410840 | 2_4:-12115101 | Msa0315630:intron |
| AAAGTATTTATGAAGATGAT+TGG | 0.413949 | 2_4:-12114064 | Msa0315630:three_prime_UTR |
| ACAGTTTACGGCAGAGTTGT+TGG | 0.415866 | 2_4:-12118444 | Msa0315630:CDS |
| TTCTGCAATTTGGAAAAGTT+GGG | 0.417811 | 2_4:-12115217 | Msa0315630:CDS |
| TCTCTATCCGGACCTCTTGT+TGG | 0.419329 | 2_4:-12115413 | Msa0315630:CDS |
| TGATGACGGGAAGTTCCTTC+TGG | 0.420704 | 2_4:-12116384 | Msa0315630:CDS |
| TTACTAAAAGTCGTTCTACT+AGG | 0.428715 | 2_4:-12116096 | Msa0315630:intron |
| AGAATAATCTTGTCGTGTTC+CGG | 0.431735 | 2_4:+12115236 | None:intergenic |
| CAGTTTACGGCAGAGTTGTT+GGG | 0.438166 | 2_4:-12118443 | Msa0315630:CDS |
| ATGCCTGAAATGCCGAAATA+GGG | 0.443678 | 2_4:+12115165 | None:intergenic |
| AAGAACGTTGTTGCGTGTGC+TGG | 0.445764 | 2_4:-12118346 | Msa0315630:CDS |
| TTGCTCCTGCATGAGGTGGC+TGG | 0.453181 | 2_4:+12116122 | None:intergenic |
| TTTGATGATTTGTCTGAGAA+AGG | 0.460293 | 2_4:+12118796 | None:intergenic |
| GGTTGGTTGTTTCAAGATGG+TGG | 0.472819 | 2_4:+12118974 | None:intergenic |
| GGCATGAGCAGCTGCAGTGT+TGG | 0.476628 | 2_4:-12115343 | Msa0315630:CDS |
| GGGGAAGCAACAACTATGTT+GGG | 0.477342 | 2_4:-12116292 | Msa0315630:CDS |
| TCTGCAGAAAATGGAACAGC+TGG | 0.479879 | 2_4:-12115260 | Msa0315630:CDS |
| CGAAATTGGCGATCTGGGTA+TGG | 0.481674 | 2_4:-12118557 | Msa0315630:exon |
| TGCGCTTTATAAAGCATTGA+AGG | 0.484376 | 2_4:+12116569 | None:intergenic |
| AGGAGATTCTCCCTTGGACC+AGG | 0.489762 | 2_4:+12116589 | None:intergenic |
| GAAATCGAAATTGGCGATCT+GGG | 0.491064 | 2_4:-12118562 | Msa0315630:five_prime_UTR |
| AATAATATGTTTGAGTGGAC+CGG | 0.492380 | 2_4:+12116545 | None:intergenic |
| GGAATAATTTACACGAATGA+AGG | 0.496581 | 2_4:+12113945 | None:intergenic |
| TCTTCTCCGAATTGAGGCCT+CGG | 0.497256 | 2_4:-12118389 | Msa0315630:CDS |
| AATGCTTTATAAAGCGCAAC+CGG | 0.499079 | 2_4:-12116564 | Msa0315630:CDS |
| TGAAGTTCTTCTCCGAATTG+AGG | 0.501294 | 2_4:-12118395 | Msa0315630:CDS |
| TGGGAAGGATTTGTTTACAA+TGG | 0.502527 | 2_4:-12115198 | Msa0315630:CDS |
| GACGGCCAGCCACCTCATGC+AGG | 0.508409 | 2_4:-12116127 | Msa0315630:CDS |
| AGGGGAAGCAACAACTATGT+TGG | 0.508852 | 2_4:-12116293 | Msa0315630:CDS |
| TAAAAGTGTTGCGTTGATTG+AGG | 0.511529 | 2_4:+12118647 | None:intergenic |
| TTTATCGCCAACAAGAGGTC+CGG | 0.512577 | 2_4:+12115406 | None:intergenic |
| ACACATGAGATAAGAAGAGT+TGG | 0.513014 | 2_4:+12118919 | None:intergenic |
| TGCAGCTGCTCATGCCACCT+CGG | 0.519909 | 2_4:+12115350 | None:intergenic |
| AGAAAATGGAACAGCTGGAC+CGG | 0.520515 | 2_4:-12115255 | Msa0315630:CDS |
| ACAACTATGTTGGGAAATTG+AGG | 0.521031 | 2_4:-12116283 | Msa0315630:intron |
| TAGACGCAGATGATATGTCC+AGG | 0.522084 | 2_4:-12116313 | Msa0315630:CDS |
| ATTTGTCTGAGAAAGGAAAA+GGG | 0.526002 | 2_4:+12118803 | None:intergenic |
| GTGGTAGAGAACTCTCTATC+CGG | 0.528357 | 2_4:-12115425 | Msa0315630:CDS |
| ATGACACAGTGCATTCTCCT+TGG | 0.528561 | 2_4:+12115569 | None:intergenic |
| TACTCGCAATAACATAATAA+CGG | 0.535052 | 2_4:-12113823 | Msa0315630:three_prime_UTR |
| TCATGTCTTCGATTATGTTG+CGG | 0.535725 | 2_4:+12118527 | None:intergenic |
| TTCGATTGAAGAGGATGGAA+TGG | 0.537253 | 2_4:+12115541 | None:intergenic |
| AGATAGTGAACTTTGTTCCA+AGG | 0.538026 | 2_4:+12116152 | None:intergenic |
| TGTCCTCCGAGGCCTCAATT+CGG | 0.540412 | 2_4:+12118383 | None:intergenic |
| ATTCAGCGCTAGGTGATGAC+GGG | 0.542238 | 2_4:-12116397 | Msa0315630:intron |
| AAAGGTAGGTACATGATGGT+TGG | 0.542875 | 2_4:+12118957 | None:intergenic |
| AGAGAAAACTCAGTTTGTGT+AGG | 0.543872 | 2_4:+12115503 | None:intergenic |
| AAAAGTGTTGCGTTGATTGA+GGG | 0.544347 | 2_4:+12118648 | None:intergenic |
| AATTCAGCGCTAGGTGATGA+CGG | 0.546541 | 2_4:-12116398 | Msa0315630:intron |
| AAGGAGAATGCACTGTGTCA+TGG | 0.546764 | 2_4:-12115567 | Msa0315630:CDS |
| GATTTGTCTGAGAAAGGAAA+AGG | 0.547431 | 2_4:+12118802 | None:intergenic |
| ATGATATAATCTGTGCATGT+AGG | 0.547626 | 2_4:+12116341 | None:intergenic |
| TGTGTAGGAGCTACGCCACC+TGG | 0.549577 | 2_4:+12115518 | None:intergenic |
| GAGAAAGGAAAAGGGTGAGA+AGG | 0.550884 | 2_4:+12118811 | None:intergenic |
| GCAATTTGGAAAAGTTGGGA+AGG | 0.553649 | 2_4:-12115213 | Msa0315630:CDS |
| ACTTCACGCAGAAGCTCTTG+TGG | 0.562675 | 2_4:+12118412 | None:intergenic |
| CCATCCTCTTCAATCGAACC+AGG | 0.562739 | 2_4:-12115536 | Msa0315630:CDS |
| CATTGAAGGAGATTCTCCCT+TGG | 0.563702 | 2_4:+12116583 | None:intergenic |
| GATGGTTGGTTGTTTCAAGA+TGG | 0.564154 | 2_4:+12118971 | None:intergenic |
| CACGCAACAACGTTCTTCCT+CGG | 0.565317 | 2_4:+12118352 | None:intergenic |
| GTGCTGGAGTGTGTAGGAGT+TGG | 0.567870 | 2_4:-12118330 | Msa0315630:CDS |
| GGCGGAGAAGGAAGAGAAAG+TGG | 0.570148 | 2_4:-12118476 | Msa0315630:CDS |
| CCTGGTTCGATTGAAGAGGA+TGG | 0.573458 | 2_4:+12115536 | None:intergenic |
| TATGATTGTGTGTGAAGAAG+AGG | 0.579866 | 2_4:+12118849 | None:intergenic |
| TACATTTGCGTGCAGCCAGA+AGG | 0.580300 | 2_4:+12116369 | None:intergenic |
| TGGACGGGTGACAATTGCCT+CGG | 0.581243 | 2_4:-12115306 | Msa0315630:CDS |
| TGGTTGTTTCAAGATGGTGG+AGG | 0.581795 | 2_4:+12118977 | None:intergenic |
| AAGGAAGAGAAAGTGGCGGT+TGG | 0.582497 | 2_4:-12118469 | Msa0315630:CDS |
| AGTTAAAGGTAGGTACATGA+TGG | 0.588350 | 2_4:+12118953 | None:intergenic |
| ATCGCAAAGAGTAGTGGTGG+TGG | 0.589679 | 2_4:-12118497 | Msa0315630:CDS |
| TTGCGTGTGCTGGAGTGTGT+AGG | 0.591079 | 2_4:-12118336 | Msa0315630:CDS |
| CGGAGGACACGTGGCCGCCG+AGG | 0.594437 | 2_4:-12118369 | Msa0315630:CDS |
| TATGTTTGAATGTCACTTGG+TGG | 0.595420 | 2_4:-12114103 | Msa0315630:three_prime_UTR |
| GCAAAGAGTAGTGGTGGTGG+CGG | 0.599034 | 2_4:-12118494 | Msa0315630:CDS |
| CTTGTTGGCGATAAAAGAGA+TGG | 0.602960 | 2_4:-12115398 | Msa0315630:CDS |
| GAAATGCCGAAATAGGGTAT+CGG | 0.603573 | 2_4:+12115171 | None:intergenic |
| CCGATCAAAATCAAATCGTG+TGG | 0.606213 | 2_4:-12115444 | Msa0315630:CDS |
| AAGAATTTATGTACAGCACA+AGG | 0.606359 | 2_4:+12113922 | None:intergenic |
| GAATTTATGTACAGCACAAG+GGG | 0.607071 | 2_4:+12113924 | None:intergenic |
| TATTTATGAAGATGATTGGA+TGG | 0.607206 | 2_4:-12114060 | Msa0315630:three_prime_UTR |
| TTGAGGCCTCGGAGGACACG+TGG | 0.607574 | 2_4:-12118378 | Msa0315630:CDS |
| GCCACCTGGTTCGATTGAAG+AGG | 0.610396 | 2_4:+12115532 | None:intergenic |
| AAACAAATAATATGTTTGAG+TGG | 0.611039 | 2_4:+12116540 | None:intergenic |
| AGCACATAGGATCTCAAAGT+GGG | 0.611741 | 2_4:+12119002 | None:intergenic |
| AGAGACAAGAAGTTAAAGGT+AGG | 0.613029 | 2_4:+12118943 | None:intergenic |
| AGACGCAGATGATATGTCCA+GGG | 0.615218 | 2_4:-12116312 | Msa0315630:CDS |
| ATCAAGATCGCAAAGAGTAG+TGG | 0.616284 | 2_4:-12118503 | Msa0315630:CDS |
| ATGTTTGAATGTCACTTGGT+GGG | 0.623108 | 2_4:-12114102 | Msa0315630:three_prime_UTR |
| ACAAAGTTCACTATCTATGA+CGG | 0.627271 | 2_4:-12116145 | Msa0315630:CDS |
| AGAATTTATGTACAGCACAA+GGG | 0.629375 | 2_4:+12113923 | None:intergenic |
| AAAGTGTTGCGTTGATTGAG+GGG | 0.634514 | 2_4:+12118649 | None:intergenic |
| TCTCCGAATTGAGGCCTCGG+AGG | 0.639401 | 2_4:-12118386 | Msa0315630:CDS |
| AAATATGTTTGAATGTCACT+TGG | 0.642156 | 2_4:-12114106 | Msa0315630:three_prime_UTR |
| GATGGTGGAGGAGAGCACAT+AGG | 0.644366 | 2_4:+12118989 | None:intergenic |
| AAGATCGCAAAGAGTAGTGG+TGG | 0.644592 | 2_4:-12118500 | Msa0315630:CDS |
| CGGCGGCCACGTGTCCTCCG+AGG | 0.663112 | 2_4:+12118372 | None:intergenic |
| TCTTGGTATCAAAGCTGCTG+AGG | 0.664183 | 2_4:+12115132 | None:intergenic |
| GATTGTGTGTGAAGAAGAGG+TGG | 0.672482 | 2_4:+12118852 | None:intergenic |
| AAACCTGTTTAACAGAAATG+GGG | 0.674456 | 2_4:+12118251 | None:intergenic |
| GAGCACATAGGATCTCAAAG+TGG | 0.685835 | 2_4:+12119001 | None:intergenic |
| TCCTCTTCAATCGAACCAGG+TGG | 0.710835 | 2_4:-12115533 | Msa0315630:CDS |
| GACGCAGATGATATGTCCAG+GGG | 0.717675 | 2_4:-12116311 | Msa0315630:CDS |
| GCAACAACGTTCTTCCTCGG+CGG | 0.717767 | 2_4:+12118355 | None:intergenic |
| GGAGAAGGAAGAGAAAGTGG+CGG | 0.735942 | 2_4:-12118473 | Msa0315630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATATTATTAATTTTCT+GGG | - | chr2_4:12117847-12117866 | Msa0315630:intron | 10.0% |
| !!! | TATATATTATTAATTTTCTG+GGG | - | chr2_4:12117848-12117867 | Msa0315630:intron | 10.0% |
| !!! | ATAAAACAATTTGTTTTATT+TGG | - | chr2_4:12117895-12117914 | Msa0315630:intron | 10.0% |
| !! | TTAAAAAAGTGATTTATGTT+TGG | - | chr2_4:12114712-12114731 | Msa0315630:intron | 15.0% |
| !! | ATATAATTATGTGGATATAA+TGG | + | chr2_4:12115388-12115407 | None:intergenic | 15.0% |
| !! | ATATAGAACATATAATTATG+TGG | + | chr2_4:12115397-12115416 | None:intergenic | 15.0% |
| !! | AATGTAATACTAAATTACTA+AGG | + | chr2_4:12116139-12116158 | None:intergenic | 15.0% |
| !! | GCAAAAATATAAAACAATAA+CGG | + | chr2_4:12116577-12116596 | None:intergenic | 15.0% |
| !! | TTAAGGAAGAATAAAAAAAA+AGG | + | chr2_4:12116624-12116643 | None:intergenic | 15.0% |
| !! | TGTTAAAAATTGATTAAAAC+TGG | - | chr2_4:12117747-12117766 | Msa0315630:intron | 15.0% |
| !!! | GGTATATATTATTAATTTTC+TGG | - | chr2_4:12117846-12117865 | Msa0315630:intron | 15.0% |
| !! | AACTATTAAGAAAGATTTAA+AGG | + | chr2_4:12118238-12118257 | None:intergenic | 15.0% |
| !! | TTAAATCTTTCTTAATAGTT+TGG | - | chr2_4:12118238-12118257 | Msa0315630:intron | 15.0% |
| !!! | TTAACAATATGATTTTCATT+TGG | - | chr2_4:12118930-12118949 | Msa0315630:five_prime_UTR | 15.0% |
| !!! | TGATTTTTTGAAGAAGAAAA+GGG | + | chr2_4:12114082-12114101 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTGAAGAAGAAA+AGG | + | chr2_4:12114083-12114102 | None:intergenic | 20.0% |
| !!! | TTTGCATTATTTTACCTTAT+GGG | + | chr2_4:12114118-12114137 | None:intergenic | 20.0% |
| !!! | TTTTGCATTATTTTACCTTA+TGG | + | chr2_4:12114119-12114138 | None:intergenic | 20.0% |
| !! | ATTGTTTAGATATTGTGTAA+AGG | - | chr2_4:12114763-12114782 | Msa0315630:intron | 20.0% |
| !! | ATTTAGCATGATTAATTGTT+TGG | - | chr2_4:12114867-12114886 | Msa0315630:intron | 20.0% |
| !!! | ACCAAATTTTATGTTTATCT+TGG | - | chr2_4:12114961-12114980 | Msa0315630:intron | 20.0% |
| !! | ACCAAGATAAACATAAAATT+TGG | + | chr2_4:12114965-12114984 | None:intergenic | 20.0% |
| !! | TACTTAATAGAGTTACATAT+TGG | + | chr2_4:12115149-12115168 | None:intergenic | 20.0% |
| !! | ATAAAAATAACAGATCCAAT+GGG | + | chr2_4:12115229-12115248 | None:intergenic | 20.0% |
| !! | TATAAAAATAACAGATCCAA+TGG | + | chr2_4:12115230-12115249 | None:intergenic | 20.0% |
| !!! | ATGTTATTAATGGATAATGT+AGG | - | chr2_4:12115332-12115351 | Msa0315630:CDS | 20.0% |
| !!! | TGTTATTAATGGATAATGTA+GGG | - | chr2_4:12115333-12115352 | Msa0315630:CDS | 20.0% |
| !! | AACTTAATATCACAATTTAG+CGG | + | chr2_4:12115437-12115456 | None:intergenic | 20.0% |
| !! | AAACAAATAATATGTTTGAG+TGG | + | chr2_4:12116269-12116288 | None:intergenic | 20.0% |
| !!! | TAATCAATTTTTAACACAGT+TGG | + | chr2_4:12117743-12117762 | None:intergenic | 20.0% |
| !!! | CATCAATGCTATTTTATATT+TGG | + | chr2_4:12118005-12118024 | None:intergenic | 20.0% |
| !! | ATAAACTATAAGGTTATGTT+TGG | + | chr2_4:12118059-12118078 | None:intergenic | 20.0% |
| !!! | AAAGTATTTATGAAGATGAT+TGG | - | chr2_4:12118742-12118761 | Msa0315630:five_prime_UTR | 20.0% |
| !! | TAAAAGAGAAGAAAAATTGA+GGG | + | chr2_4:12118913-12118932 | None:intergenic | 20.0% |
| !! | TTAAAAGAGAAGAAAAATTG+AGG | + | chr2_4:12118914-12118933 | None:intergenic | 20.0% |
| !! | TTTCAAAATCAGTAACAAAT+TGG | - | chr2_4:12119021-12119040 | Msa0315630:five_prime_UTR | 20.0% |
| !!! | TTGCATTATTTTACCTTATG+GGG | + | chr2_4:12114117-12114136 | None:intergenic | 25.0% |
| !! | AGGTGAAATTTTTCATCTTT+TGG | - | chr2_4:12114214-12114233 | Msa0315630:intron | 25.0% |
| !! | TGAAATTTTTCATCTTTTGG+TGG | - | chr2_4:12114217-12114236 | Msa0315630:intron | 25.0% |
| ! | AAAACCTGTTTAACAGAAAT+GGG | + | chr2_4:12114559-12114578 | None:intergenic | 25.0% |
| !!! | TGATTTTGTAGCATTGATTT+TGG | - | chr2_4:12114689-12114708 | Msa0315630:intron | 25.0% |
| !! | TTGGATTTGGTTGTTTATAA+TGG | - | chr2_4:12114797-12114816 | Msa0315630:intron | 25.0% |
| !! | TGGATTTGGTTGTTTATAAT+GGG | - | chr2_4:12114798-12114817 | Msa0315630:intron | 25.0% |
| ! | ATGATTAATTGTTTGGATGA+GGG | - | chr2_4:12114874-12114893 | Msa0315630:intron | 25.0% |
| !!! | TACCTTGTTTCTTTGTTATT+TGG | - | chr2_4:12114916-12114935 | Msa0315630:intron | 25.0% |
| ! | TACCAAATAACAAAGAAACA+AGG | + | chr2_4:12114921-12114940 | None:intergenic | 25.0% |
| !!! | AGTGTGGAAAATTGTTATTT+TGG | - | chr2_4:12115302-12115321 | Msa0315630:CDS | 25.0% |
| !!! | TGGAAAATTGTTATTTTGGT+TGG | - | chr2_4:12115306-12115325 | Msa0315630:CDS | 25.0% |
| !! | AGCACAAAATATCTAGAATT+AGG | + | chr2_4:12115365-12115384 | None:intergenic | 25.0% |
| ! | TATGTTCTATATTATCTGAG+AGG | - | chr2_4:12115405-12115424 | Msa0315630:CDS | 25.0% |
| !! | GCTAGGATATAATTATGTTT+TGG | - | chr2_4:12115684-12115703 | Msa0315630:intron | 25.0% |
| !!! | AATTATGTTTTGGTTGAGTA+CGG | - | chr2_4:12115694-12115713 | Msa0315630:intron | 25.0% |
| ! | TAATTGAATGTAACATGTGT+CGG | + | chr2_4:12115779-12115798 | None:intergenic | 25.0% |
| ! | CCATATTCTCAAATTATTAC+CGG | - | chr2_4:12115801-12115820 | Msa0315630:intron | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | + | chr2_4:12115877-12115896 | None:intergenic | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | + | chr2_4:12115877-12115896 | None:intergenic | 25.0% |
| ! | CATATCAACAACAAAGAATA+TGG | + | chr2_4:12115913-12115932 | None:intergenic | 25.0% |
| !! | AATTTTCCTAACCAAAAAGT+AGG | - | chr2_4:12115934-12115953 | Msa0315630:intron | 25.0% |
| ! | ATGATGATTGAATATGACTA+TGG | - | chr2_4:12116063-12116082 | Msa0315630:intron | 25.0% |
| !! | TTTACCTAACATGTTTCTAT+TGG | - | chr2_4:12116178-12116197 | Msa0315630:intron | 25.0% |
| !! | TTTCTATTGGCGAATAATTT+TGG | - | chr2_4:12116191-12116210 | Msa0315630:intron | 25.0% |
| ! | GTGAGTATACAATTAATCTT+TGG | - | chr2_4:12116305-12116324 | Msa0315630:CDS | 25.0% |
| ! | TCATATGAATTAAATGTGCT+AGG | - | chr2_4:12116796-12116815 | Msa0315630:intron | 25.0% |
| ! | TGTCGAACAAAATAAAAGTA+TGG | + | chr2_4:12117111-12117130 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGATCGGAAAAA+AGG | + | chr2_4:12117357-12117376 | None:intergenic | 25.0% |
| !! | ATCATTGAGCAAATACATTT+TGG | - | chr2_4:12117794-12117813 | Msa0315630:intron | 25.0% |
| !!! | ATATTATTAATTTTCTGGGG+TGG | - | chr2_4:12117851-12117870 | Msa0315630:intron | 25.0% |
| ! | AGGGTTTGATATAAACTATA+AGG | + | chr2_4:12118069-12118088 | None:intergenic | 25.0% |
| ! | CCATTATAAATACCAGAAAA+GGG | + | chr2_4:12118088-12118107 | None:intergenic | 25.0% |
| ! | TAGAACATTATGACATTGTT+TGG | + | chr2_4:12118176-12118195 | None:intergenic | 25.0% |
| ! | AATCTTTCTTAATAGTTTGG+AGG | - | chr2_4:12118241-12118260 | Msa0315630:intron | 25.0% |
| ! | TTTACAATCAAAATATGCAG+CGG | + | chr2_4:12118414-12118433 | None:intergenic | 25.0% |
| ! | AATAAAGTAACTGAGATAAC+AGG | + | chr2_4:12118580-12118599 | None:intergenic | 25.0% |
| ! | GTTTATCTAATGAGAATGTT+TGG | - | chr2_4:12118631-12118650 | Msa0315630:five_prime_UTR | 25.0% |
| ! | AAATATGTTTGAATGTCACT+TGG | - | chr2_4:12118700-12118719 | Msa0315630:five_prime_UTR | 25.0% |
| ! | CTTCATAAATACTTTCTCAT+TGG | + | chr2_4:12118737-12118756 | None:intergenic | 25.0% |
| ! | TATTTATGAAGATGATTGGA+TGG | - | chr2_4:12118746-12118765 | Msa0315630:five_prime_UTR | 25.0% |
| ! | TACTCGCAATAACATAATAA+CGG | - | chr2_4:12118983-12119002 | Msa0315630:five_prime_UTR | 25.0% |
| ATTTGTCTGAGAAAGGAAAA+GGG | + | chr2_4:12114006-12114025 | None:intergenic | 30.0% | |
| ! | TTTGATGATTTGTCTGAGAA+AGG | + | chr2_4:12114013-12114032 | None:intergenic | 30.0% |
| GAAGATTGTGATGAAAAAAG+GGG | + | chr2_4:12114060-12114079 | None:intergenic | 30.0% | |
| GGAAGATTGTGATGAAAAAA+GGG | + | chr2_4:12114061-12114080 | None:intergenic | 30.0% | |
| ! | AATTTTTCTCATTCCCCATA+AGG | - | chr2_4:12114101-12114120 | Msa0315630:three_prime_UTR | 30.0% |
| ! | TTCTCTCTCTTCTCTTTTAA+AGG | - | chr2_4:12114194-12114213 | Msa0315630:intron | 30.0% |
| AAACCTGTTTAACAGAAATG+GGG | + | chr2_4:12114558-12114577 | None:intergenic | 30.0% | |
| GAAAACCTGTTTAACAGAAA+TGG | + | chr2_4:12114560-12114579 | None:intergenic | 30.0% | |
| AAAGCGATAGAAAATGAGAA+TGG | + | chr2_4:12114590-12114609 | None:intergenic | 30.0% | |
| ATTTATGTTTGGATGCTTTG+AGG | - | chr2_4:12114723-12114742 | Msa0315630:intron | 30.0% | |
| !! | AGATTTTGTTTGATGCATTG+AGG | - | chr2_4:12114822-12114841 | Msa0315630:intron | 30.0% |
| TTTGATGCATTGAGGTTAAT+TGG | - | chr2_4:12114830-12114849 | Msa0315630:intron | 30.0% | |
| TTGATGCATTGAGGTTAATT+GGG | - | chr2_4:12114831-12114850 | Msa0315630:intron | 30.0% | |
| CATGATTAATTGTTTGGATG+AGG | - | chr2_4:12114873-12114892 | Msa0315630:intron | 30.0% | |
| GTAAATGTAAACATACACAG+AGG | + | chr2_4:12115207-12115226 | None:intergenic | 30.0% | |
| GTATGTTTACATTTACCCAT+TGG | - | chr2_4:12115211-12115230 | Msa0315630:CDS | 30.0% | |
| ! | TGGTTGGTCAATGTTATTAA+TGG | - | chr2_4:12115322-12115341 | Msa0315630:CDS | 30.0% |
| !! | TAATGGATAATGTAGGGTTT+TGG | - | chr2_4:12115339-12115358 | Msa0315630:CDS | 30.0% |
| TTCTATATTATCTGAGAGGT+TGG | - | chr2_4:12115409-12115428 | Msa0315630:CDS | 30.0% | |
| TCTATATTATCTGAGAGGTT+GGG | - | chr2_4:12115410-12115429 | Msa0315630:CDS | 30.0% | |
| TCAACTTGTGAAACTTTACA+TGG | - | chr2_4:12115459-12115478 | Msa0315630:CDS | 30.0% | |
| CAACTTGTGAAACTTTACAT+GGG | - | chr2_4:12115460-12115479 | Msa0315630:CDS | 30.0% | |
| ! | GGTCATTTCAATGTCTTTTA+AGG | + | chr2_4:12115503-12115522 | None:intergenic | 30.0% |
| TAAAAGACATTGAAATGACC+AGG | - | chr2_4:12115503-12115522 | Msa0315630:CDS | 30.0% | |
| TAATAACCAGAAACAAAACC+TGG | + | chr2_4:12115524-12115543 | None:intergenic | 30.0% | |
| !!! | ATTATGTTTTGGTTGAGTAC+GGG | - | chr2_4:12115695-12115714 | Msa0315630:intron | 30.0% |
| CCGGTAATAATTTGAGAATA+TGG | + | chr2_4:12115804-12115823 | None:intergenic | 30.0% | |
| GAATATGGAAAACACAAACA+CGG | + | chr2_4:12115862-12115881 | None:intergenic | 30.0% | |
| TATACTATTCAACACCAAAG+AGG | + | chr2_4:12116003-12116022 | None:intergenic | 30.0% | |
| !! | TTGGTGTTGAATAGTATACA+TGG | - | chr2_4:12116005-12116024 | Msa0315630:intron | 30.0% |
| GATTGAATATGACTATGTTG+TGG | - | chr2_4:12116068-12116087 | Msa0315630:intron | 30.0% | |
| AATATGACTATGTTGTGGAA+GGG | - | chr2_4:12116073-12116092 | Msa0315630:intron | 30.0% | |
| !! | TACATTGTTTTACAGCACTA+TGG | - | chr2_4:12116153-12116172 | Msa0315630:CDS | 30.0% |
| AATAATATGTTTGAGTGGAC+CGG | + | chr2_4:12116264-12116283 | None:intergenic | 30.0% | |
| TGAAGGTTTAGATCTCAAAA+AGG | + | chr2_4:12116369-12116388 | None:intergenic | 30.0% | |
| ! | TGAGATCTAAACCTTCATTT+TGG | - | chr2_4:12116372-12116391 | Msa0315630:CDS | 30.0% |
| ATGATATAATCTGTGCATGT+AGG | + | chr2_4:12116468-12116487 | None:intergenic | 30.0% | |
| !!! | ATTTTTGCTGTTTATCAGTG+TGG | - | chr2_4:12116589-12116608 | Msa0315630:CDS | 30.0% |
| TCCTTAAGATCAAATTTCCT+TGG | - | chr2_4:12116637-12116656 | Msa0315630:intron | 30.0% | |
| TCCAAGGAAATTTGATCTTA+AGG | + | chr2_4:12116641-12116660 | None:intergenic | 30.0% | |
| ACAAAGTTCACTATCTATGA+CGG | - | chr2_4:12116661-12116680 | Msa0315630:intron | 30.0% | |
| TTACTAAAAGTCGTTCTACT+AGG | - | chr2_4:12116710-12116729 | Msa0315630:intron | 30.0% | |
| !! | CTTACTTTTATCACAACGAT+CGG | - | chr2_4:12116947-12116966 | Msa0315630:intron | 30.0% |
| ACTATCTATATATTGCAAGC+AGG | - | chr2_4:12117211-12117230 | Msa0315630:intron | 30.0% | |
| CTATCTATATATTGCAAGCA+GGG | - | chr2_4:12117212-12117231 | Msa0315630:intron | 30.0% | |
| TATCTATATATTGCAAGCAG+GGG | - | chr2_4:12117213-12117232 | Msa0315630:intron | 30.0% | |
| TATGCTTGTGTTGAAAAACA+AGG | - | chr2_4:12117431-12117450 | Msa0315630:intron | 30.0% | |
| !! | TGTTGGTGCTTAAATTTTCA+TGG | - | chr2_4:12117480-12117499 | Msa0315630:intron | 30.0% |
| GACAAGATTATTCTGCAATT+TGG | - | chr2_4:12117579-12117598 | Msa0315630:intron | 30.0% | |
| ATTCTGCAATTTGGAAAAGT+TGG | - | chr2_4:12117588-12117607 | Msa0315630:intron | 30.0% | |
| TTCTGCAATTTGGAAAAGTT+GGG | - | chr2_4:12117589-12117608 | Msa0315630:intron | 30.0% | |
| ! | GAATAAGAGCATGTTTAAAC+AGG | - | chr2_4:12117705-12117724 | Msa0315630:intron | 30.0% |
| !!! | TGAGCAAATACATTTTGGTT+TGG | - | chr2_4:12117799-12117818 | Msa0315630:intron | 30.0% |
| GCATAAGATTACAAAAAGAG+AGG | + | chr2_4:12117949-12117968 | None:intergenic | 30.0% | |
| TTTGGTAGACAGACTAAAAT+AGG | + | chr2_4:12118041-12118060 | None:intergenic | 30.0% | |
| ! | GTTTATATCAAACCCTTTTC+TGG | - | chr2_4:12118073-12118092 | Msa0315630:intron | 30.0% |
| !! | CCCTTTTCTGGTATTTATAA+TGG | - | chr2_4:12118085-12118104 | Msa0315630:intron | 30.0% |
| GCCATTATAAATACCAGAAA+AGG | + | chr2_4:12118089-12118108 | None:intergenic | 30.0% | |
| AGATTTAAAGGTCAACTGTT+TGG | + | chr2_4:12118226-12118245 | None:intergenic | 30.0% | |
| TAACTCAGAAACTTAGGATT+TGG | - | chr2_4:12118315-12118334 | Msa0315630:CDS | 30.0% | |
| AGATAACAGGTACAATCTTA+TGG | + | chr2_4:12118567-12118586 | None:intergenic | 30.0% | |
| !! | TTTGGTTCAATTTTAATGCC+AGG | - | chr2_4:12118649-12118668 | Msa0315630:five_prime_UTR | 30.0% |
| GTTCTACTGAATCCATAATA+AGG | - | chr2_4:12118770-12118789 | Msa0315630:five_prime_UTR | 30.0% | |
| GGAATAATTTACACGAATGA+AGG | + | chr2_4:12118864-12118883 | None:intergenic | 30.0% | |
| AGAATTTATGTACAGCACAA+GGG | + | chr2_4:12118886-12118905 | None:intergenic | 30.0% | |
| AAGAATTTATGTACAGCACA+AGG | + | chr2_4:12118887-12118906 | None:intergenic | 30.0% | |
| AGTTAAAGGTAGGTACATGA+TGG | + | chr2_4:12113856-12113875 | None:intergenic | 35.0% | |
| AGAGACAAGAAGTTAAAGGT+AGG | + | chr2_4:12113866-12113885 | None:intergenic | 35.0% | |
| TGGAAGAGACAAGAAGTTAA+AGG | + | chr2_4:12113870-12113889 | None:intergenic | 35.0% | |
| ACACATGAGATAAGAAGAGT+TGG | + | chr2_4:12113890-12113909 | None:intergenic | 35.0% | |
| TATGATTGTGTGTGAAGAAG+AGG | + | chr2_4:12113960-12113979 | None:intergenic | 35.0% | |
| GATTTGTCTGAGAAAGGAAA+AGG | + | chr2_4:12114007-12114026 | None:intergenic | 35.0% | |
| GGGAAGATTGTGATGAAAAA+AGG | + | chr2_4:12114062-12114081 | None:intergenic | 35.0% | |
| !! | AAAAGTGTTGCGTTGATTGA+GGG | + | chr2_4:12114161-12114180 | None:intergenic | 35.0% |
| !! | TAAAAGTGTTGCGTTGATTG+AGG | + | chr2_4:12114162-12114181 | None:intergenic | 35.0% |
| TCATGTCTTCGATTATGTTG+CGG | + | chr2_4:12114282-12114301 | None:intergenic | 35.0% | |
| GTGATCATAGCTGAAATTTC+AGG | + | chr2_4:12114532-12114551 | None:intergenic | 35.0% | |
| TTTCCCCATTTCTGTTAAAC+AGG | - | chr2_4:12114552-12114571 | Msa0315630:intron | 35.0% | |
| TTTCTATCGCTTTCCTCATA+TGG | - | chr2_4:12114597-12114616 | Msa0315630:intron | 35.0% | |
| TTCTATCGCTTTCCTCATAT+GGG | - | chr2_4:12114598-12114617 | Msa0315630:intron | 35.0% | |
| !! | TTTTGACTACAACCCATATG+AGG | + | chr2_4:12114613-12114632 | None:intergenic | 35.0% |
| TGTAAAGGACCAAAATGTGT+TGG | - | chr2_4:12114778-12114797 | Msa0315630:intron | 35.0% | |
| ! | CAACCAAATCCAACACATTT+TGG | + | chr2_4:12114790-12114809 | None:intergenic | 35.0% |
| CATAACTTTCGCAACTACAA+TGG | + | chr2_4:12115081-12115100 | None:intergenic | 35.0% | |
| ! | AAACGTTCTTTTTCTCAGTG+TGG | - | chr2_4:12115286-12115305 | Msa0315630:CDS | 35.0% |
| !!! | AAATGACCAGGTTTTGTTTC+TGG | - | chr2_4:12115515-12115534 | Msa0315630:CDS | 35.0% |
| TCAAATACTCCTCTTACTAC+AGG | - | chr2_4:12115580-12115599 | Msa0315630:intron | 35.0% | |
| ! | TGAGATATCATCTACTGGTT+TGG | - | chr2_4:12115662-12115681 | Msa0315630:intron | 35.0% |
| ACACTGACACTTCATATTGA+AGG | - | chr2_4:12115724-12115743 | Msa0315630:intron | 35.0% | |
| CACAAACAAGGGAATCTTAA+GGG | + | chr2_4:12116036-12116055 | None:intergenic | 35.0% | |
| GAATATGACTATGTTGTGGA+AGG | - | chr2_4:12116072-12116091 | Msa0315630:intron | 35.0% | |
| TTCGCCAATAGAAACATGTT+AGG | + | chr2_4:12116185-12116204 | None:intergenic | 35.0% | |
| !! | TGCGCTTTATAAAGCATTGA+AGG | + | chr2_4:12116240-12116259 | None:intergenic | 35.0% |
| AATGCTTTATAAAGCGCAAC+CGG | - | chr2_4:12116242-12116261 | Msa0315630:intron | 35.0% | |
| AGAAGCAATGACCAAAATGA+AGG | + | chr2_4:12116386-12116405 | None:intergenic | 35.0% | |
| ACAACTATGTTGGGAAATTG+AGG | - | chr2_4:12116523-12116542 | Msa0315630:intron | 35.0% | |
| AGATAGTGAACTTTGTTCCA+AGG | + | chr2_4:12116657-12116676 | None:intergenic | 35.0% | |
| TAAAAGTCGTTCTACTAGGT+TGG | - | chr2_4:12116714-12116733 | Msa0315630:intron | 35.0% | |
| AATTAAATGTGCTAGGCTCT+AGG | - | chr2_4:12116803-12116822 | Msa0315630:intron | 35.0% | |
| CGATCGTTGTGATAAAAGTA+AGG | + | chr2_4:12116949-12116968 | None:intergenic | 35.0% | |
| CGGTAAGCTAAATAGTTTAC+GGG | + | chr2_4:12117159-12117178 | None:intergenic | 35.0% | |
| GCGGTAAGCTAAATAGTTTA+CGG | + | chr2_4:12117160-12117179 | None:intergenic | 35.0% | |
| ATCTATATATTGCAAGCAGG+GGG | - | chr2_4:12117214-12117233 | Msa0315630:intron | 35.0% | |
| AGAGAAAACTCAGTTTGTGT+AGG | + | chr2_4:12117306-12117325 | None:intergenic | 35.0% | |
| GATCGGAAAAAAGGAAACAA+GGG | + | chr2_4:12117348-12117367 | None:intergenic | 35.0% | |
| TGATCGGAAAAAAGGAAACA+AGG | + | chr2_4:12117349-12117368 | None:intergenic | 35.0% | |
| !! | CCACACGATTTGATTTTGAT+CGG | + | chr2_4:12117365-12117384 | None:intergenic | 35.0% |
| ! | GGTGCTTAAATTTTCATGGA+CGG | - | chr2_4:12117484-12117503 | Msa0315630:intron | 35.0% |
| ! | GTGCTTAAATTTTCATGGAC+GGG | - | chr2_4:12117485-12117504 | Msa0315630:intron | 35.0% |
| AGAATAATCTTGTCGTGTTC+CGG | + | chr2_4:12117573-12117592 | None:intergenic | 35.0% | |
| ! | TGGGAAGGATTTGTTTACAA+TGG | - | chr2_4:12117608-12117627 | Msa0315630:intron | 35.0% |
| CTCTTATTCACAAGCAATCT+TGG | + | chr2_4:12117694-12117713 | None:intergenic | 35.0% | |
| !! | TGGTAGCTTTAAGTAGTGTT+TGG | - | chr2_4:12117871-12117890 | Msa0315630:intron | 35.0% |
| GGATAAGGCTTAATTGTTGT+TGG | + | chr2_4:12118128-12118147 | None:intergenic | 35.0% | |
| ! | ACAATTAAGCCTTATCCCAT+TGG | - | chr2_4:12118131-12118150 | Msa0315630:intron | 35.0% |
| ! | CAATTAAGCCTTATCCCATT+GGG | - | chr2_4:12118132-12118151 | Msa0315630:intron | 35.0% |
| TCAAAATATGCAGCGGTATT+GGG | + | chr2_4:12118407-12118426 | None:intergenic | 35.0% | |
| ATCAAAATATGCAGCGGTAT+TGG | + | chr2_4:12118408-12118427 | None:intergenic | 35.0% | |
| GAAATTCCGATCGTGAAATT+TGG | - | chr2_4:12118440-12118459 | Msa0315630:CDS | 35.0% | |
| GACAATCCAAATTTCACGAT+CGG | + | chr2_4:12118449-12118468 | None:intergenic | 35.0% | |
| AACAGGTACAATCTTATGGA+TGG | + | chr2_4:12118563-12118582 | None:intergenic | 35.0% | |
| TCTCAGATTGTGATCTAATC+TGG | + | chr2_4:12118681-12118700 | None:intergenic | 35.0% | |
| ! | TATGTTTGAATGTCACTTGG+TGG | - | chr2_4:12118703-12118722 | Msa0315630:five_prime_UTR | 35.0% |
| ! | ATGTTTGAATGTCACTTGGT+GGG | - | chr2_4:12118704-12118723 | Msa0315630:five_prime_UTR | 35.0% |
| GAATTTATGTACAGCACAAG+GGG | + | chr2_4:12118885-12118904 | None:intergenic | 35.0% | |
| AGCACATAGGATCTCAAAGT+GGG | + | chr2_4:12113807-12113826 | None:intergenic | 40.0% | |
| ! | GATGGTTGGTTGTTTCAAGA+TGG | + | chr2_4:12113838-12113857 | None:intergenic | 40.0% |
| AAAGGTAGGTACATGATGGT+TGG | + | chr2_4:12113852-12113871 | None:intergenic | 40.0% | |
| !! | AAAGTGTTGCGTTGATTGAG+GGG | + | chr2_4:12114160-12114179 | None:intergenic | 40.0% |
| CAGATCGCCAATTTCGATTT+CGG | + | chr2_4:12114245-12114264 | None:intergenic | 40.0% | |
| GAAATCGAAATTGGCGATCT+GGG | - | chr2_4:12114244-12114263 | Msa0315630:intron | 40.0% | |
| ATCAAGATCGCAAAGAGTAG+TGG | - | chr2_4:12114303-12114322 | Msa0315630:intron | 40.0% | |
| TGAAGTTCTTCTCCGAATTG+AGG | - | chr2_4:12114411-12114430 | Msa0315630:intron | 40.0% | |
| GGACCAAAATGTGTTGGATT+TGG | - | chr2_4:12114784-12114803 | Msa0315630:intron | 40.0% | |
| !! | CAACTACAATGGCATCGATA+AGG | + | chr2_4:12115070-12115089 | None:intergenic | 40.0% |
| GTAAACATACACAGAGGAAC+AGG | + | chr2_4:12115201-12115220 | None:intergenic | 40.0% | |
| TCTGCGTGTGATTCTCTATT+AGG | - | chr2_4:12115633-12115652 | Msa0315630:intron | 40.0% | |
| GTGTGATTCTCTATTAGGCT+TGG | - | chr2_4:12115638-12115657 | Msa0315630:intron | 40.0% | |
| TTGGCTGAGATATCATCTAC+TGG | - | chr2_4:12115657-12115676 | Msa0315630:intron | 40.0% | |
| !! | TATCATCTACTGGTTTGGCT+AGG | - | chr2_4:12115667-12115686 | Msa0315630:intron | 40.0% |
| TCCTAACCAAAAAGTAGGAG+AGG | - | chr2_4:12115939-12115958 | Msa0315630:intron | 40.0% | |
| !!! | ACCTCTCCTACTTTTTGGTT+AGG | + | chr2_4:12115943-12115962 | None:intergenic | 40.0% |
| !! | ACTGTTTTGGGCTAATTGAG+TGG | - | chr2_4:12115964-12115983 | Msa0315630:intron | 40.0% |
| !! | CTGTTTTGGGCTAATTGAGT+GGG | - | chr2_4:12115965-12115984 | Msa0315630:intron | 40.0% |
| !! | AACACCAAAGAGGCATCTTA+TGG | + | chr2_4:12115993-12116012 | None:intergenic | 40.0% |
| CCACAAACAAGGGAATCTTA+AGG | + | chr2_4:12116037-12116056 | None:intergenic | 40.0% | |
| ! | CCTTAAGATTCCCTTGTTTG+TGG | - | chr2_4:12116034-12116053 | Msa0315630:intron | 40.0% |
| ! | AAGATTCCCTTGTTTGTGGA+AGG | - | chr2_4:12116038-12116057 | Msa0315630:intron | 40.0% |
| ! | AGATTCCCTTGTTTGTGGAA+GGG | - | chr2_4:12116039-12116058 | Msa0315630:intron | 40.0% |
| TGCTTCTTTAATTCAGCGCT+AGG | - | chr2_4:12116399-12116418 | Msa0315630:intron | 40.0% | |
| ! | GTAAATTTTGCTCCTGCATG+AGG | + | chr2_4:12116694-12116713 | None:intergenic | 40.0% |
| !! | TAGGTTGGTGAATCTAAAGC+AGG | - | chr2_4:12116729-12116748 | Msa0315630:intron | 40.0% |
| GGTAAAGTCACACAGATGAT+GGG | - | chr2_4:12116968-12116987 | Msa0315630:intron | 40.0% | |
| ATAGTTTACGGGTAACGCTT+TGG | + | chr2_4:12117148-12117167 | None:intergenic | 40.0% | |
| TTCGATTGAAGAGGATGGAA+TGG | + | chr2_4:12117268-12117287 | None:intergenic | 40.0% | |
| CCGATCAAAATCAAATCGTG+TGG | - | chr2_4:12117362-12117381 | Msa0315630:intron | 40.0% | |
| ! | TCTCTTTTATCGCCAACAAG+AGG | + | chr2_4:12117408-12117427 | None:intergenic | 40.0% |
| CTTGTTGGCGATAAAAGAGA+TGG | - | chr2_4:12117408-12117427 | Msa0315630:intron | 40.0% | |
| ! | CAGCTGAAAGTTTTTAACCG+AGG | + | chr2_4:12117520-12117539 | None:intergenic | 40.0% |
| CTCGGTTAAAAACTTTCAGC+TGG | - | chr2_4:12117518-12117537 | Msa0315630:intron | 40.0% | |
| GGTTAAAAACTTTCAGCTGG+TGG | - | chr2_4:12117521-12117540 | Msa0315630:intron | 40.0% | |
| GCAATTTGGAAAAGTTGGGA+AGG | - | chr2_4:12117593-12117612 | Msa0315630:intron | 40.0% | |
| GGATTTCCGATACCCTATTT+CGG | - | chr2_4:12117629-12117648 | Msa0315630:intron | 40.0% | |
| GAAATGCCGAAATAGGGTAT+CGG | + | chr2_4:12117638-12117657 | None:intergenic | 40.0% | |
| ATACCCTATTTCGGCATTTC+AGG | - | chr2_4:12117638-12117657 | Msa0315630:intron | 40.0% | |
| ATGCCTGAAATGCCGAAATA+GGG | + | chr2_4:12117644-12117663 | None:intergenic | 40.0% | |
| AATGCCTGAAATGCCGAAAT+AGG | + | chr2_4:12117645-12117664 | None:intergenic | 40.0% | |
| ! | TGGCAAATTGTGTCACTATG+TGG | - | chr2_4:12117819-12117838 | Msa0315630:intron | 40.0% |
| ! | ATTGTGTCACTATGTGGCAA+TGG | - | chr2_4:12117825-12117844 | Msa0315630:intron | 40.0% |
| GGAGGATAACTCAGAAACTT+AGG | - | chr2_4:12118309-12118328 | Msa0315630:CDS | 40.0% | |
| ACCATCTGATCTCGATCTAA+TGG | + | chr2_4:12118384-12118403 | None:intergenic | 40.0% | |
| GATCTAATCTGGATTGAACC+TGG | + | chr2_4:12118670-12118689 | None:intergenic | 40.0% | |
| !! | ACGAGTTTTCAGCTAGTTTC+TGG | - | chr2_4:12118801-12118820 | Msa0315630:five_prime_UTR | 40.0% |
| GAGCACATAGGATCTCAAAG+TGG | + | chr2_4:12113808-12113827 | None:intergenic | 45.0% | |
| ! | TGGTTGTTTCAAGATGGTGG+AGG | + | chr2_4:12113832-12113851 | None:intergenic | 45.0% |
| ! | GGTTGGTTGTTTCAAGATGG+TGG | + | chr2_4:12113835-12113854 | None:intergenic | 45.0% |
| TTGTTGAGAGAGAGAGAGAG+AGG | + | chr2_4:12113926-12113945 | None:intergenic | 45.0% | |
| GATTGTGTGTGAAGAAGAGG+TGG | + | chr2_4:12113957-12113976 | None:intergenic | 45.0% | |
| GAGAAAGGAAAAGGGTGAGA+AGG | + | chr2_4:12113998-12114017 | None:intergenic | 45.0% | |
| GGTGGAACCGAAATCGAAAT+TGG | - | chr2_4:12114235-12114254 | Msa0315630:intron | 45.0% | |
| CGAAATCGAAATTGGCGATC+TGG | - | chr2_4:12114243-12114262 | Msa0315630:intron | 45.0% | |
| AAGATCGCAAAGAGTAGTGG+TGG | - | chr2_4:12114306-12114325 | Msa0315630:intron | 45.0% | |
| ACAGTTTACGGCAGAGTTGT+TGG | - | chr2_4:12114362-12114381 | Msa0315630:intron | 45.0% | |
| CAGTTTACGGCAGAGTTGTT+GGG | - | chr2_4:12114363-12114382 | Msa0315630:intron | 45.0% | |
| ! | ACCTAACCAACGTTTAGCTC+CGG | - | chr2_4:12115609-12115628 | Msa0315630:intron | 45.0% |
| ! | CTTCATATTGAAGGTGTGCC+CGG | - | chr2_4:12115733-12115752 | Msa0315630:intron | 45.0% |
| !! | TGTCGGTGTCATGTTGTTGT+CGG | + | chr2_4:12115762-12115781 | None:intergenic | 45.0% |
| !! | CAGTGACCTCTCCTACTTTT+TGG | + | chr2_4:12115948-12115967 | None:intergenic | 45.0% |
| ! | AGTAGGAGAGGTCACTGTTT+TGG | - | chr2_4:12115951-12115970 | Msa0315630:intron | 45.0% |
| ! | GTAGGAGAGGTCACTGTTTT+GGG | - | chr2_4:12115952-12115971 | Msa0315630:intron | 45.0% |
| TCATGCCCTTCCACAAACAA+GGG | + | chr2_4:12116047-12116066 | None:intergenic | 45.0% | |
| ATCATGCCCTTCCACAAACA+AGG | + | chr2_4:12116048-12116067 | None:intergenic | 45.0% | |
| CATTGAAGGAGATTCTCCCT+TGG | + | chr2_4:12116226-12116245 | None:intergenic | 45.0% | |
| AATTCAGCGCTAGGTGATGA+CGG | - | chr2_4:12116408-12116427 | Msa0315630:intron | 45.0% | |
| TAGACGCAGATGATATGTCC+AGG | - | chr2_4:12116493-12116512 | Msa0315630:intron | 45.0% | |
| AGACGCAGATGATATGTCCA+GGG | - | chr2_4:12116494-12116513 | Msa0315630:intron | 45.0% | |
| ! | AACATAGTTGTTGCTTCCCC+TGG | + | chr2_4:12116514-12116533 | None:intergenic | 45.0% |
| AGGGGAAGCAACAACTATGT+TGG | - | chr2_4:12116513-12116532 | Msa0315630:intron | 45.0% | |
| GGGGAAGCAACAACTATGTT+GGG | - | chr2_4:12116514-12116533 | Msa0315630:intron | 45.0% | |
| ! | AATTTTGCTCCTGCATGAGG+TGG | + | chr2_4:12116691-12116710 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGGTTTCACCCA+AGG | - | chr2_4:12116741-12116760 | Msa0315630:intron | 45.0% |
| TCATATGAGATGTGAGCCAC+TGG | + | chr2_4:12116784-12116803 | None:intergenic | 45.0% | |
| CGGTAAAGTCACACAGATGA+TGG | - | chr2_4:12116967-12116986 | Msa0315630:intron | 45.0% | |
| ACCGCGCACTCTTCATATAT+TGG | - | chr2_4:12117175-12117194 | Msa0315630:intron | 45.0% | |
| ! | GCCAATATATGAAGAGTGCG+CGG | + | chr2_4:12117179-12117198 | None:intergenic | 45.0% |
| ATGACACAGTGCATTCTCCT+TGG | + | chr2_4:12117240-12117259 | None:intergenic | 45.0% | |
| AAGGAGAATGCACTGTGTCA+TGG | - | chr2_4:12117239-12117258 | Msa0315630:intron | 45.0% | |
| GTGGTAGAGAACTCTCTATC+CGG | - | chr2_4:12117381-12117400 | Msa0315630:intron | 45.0% | |
| TTTATCGCCAACAAGAGGTC+CGG | + | chr2_4:12117403-12117422 | None:intergenic | 45.0% | |
| TGTTGAAAAACAAGGCTCCG+AGG | - | chr2_4:12117439-12117458 | Msa0315630:intron | 45.0% | |
| TCTGCAGAAAATGGAACAGC+TGG | - | chr2_4:12117546-12117565 | Msa0315630:intron | 45.0% | |
| AGAAAATGGAACAGCTGGAC+CGG | - | chr2_4:12117551-12117570 | Msa0315630:intron | 45.0% | |
| TCTTGGTATCAAAGCTGCTG+AGG | + | chr2_4:12117677-12117696 | None:intergenic | 45.0% | |
| ! | TAAGCCTTATCCCATTGGGT+AGG | - | chr2_4:12118136-12118155 | Msa0315630:intron | 45.0% |
| ! | AAGCCTTATCCCATTGGGTA+GGG | - | chr2_4:12118137-12118156 | Msa0315630:intron | 45.0% |
| ACGGGCAGCAAACGAATAAT+AGG | + | chr2_4:12118275-12118294 | None:intergenic | 45.0% | |
| GCCATTAGATCGAGATCAGA+TGG | - | chr2_4:12118380-12118399 | Msa0315630:CDS | 45.0% | |
| CATTCACGCAATCAGCATGT+CGG | + | chr2_4:12118492-12118511 | None:intergenic | 45.0% | |
| ! | ATGCTGATTGCGTGAATGTG+TGG | - | chr2_4:12118494-12118513 | Msa0315630:CDS | 45.0% |
| TCGTGTGCAGCACCTTATTA+TGG | + | chr2_4:12118785-12118804 | None:intergenic | 45.0% | |
| CGAAATTGGCGATCTGGGTA+TGG | - | chr2_4:12114249-12114268 | Msa0315630:intron | 50.0% | |
| ATCGCAAAGAGTAGTGGTGG+TGG | - | chr2_4:12114309-12114328 | Msa0315630:intron | 50.0% | |
| GGAGAAGGAAGAGAAAGTGG+CGG | - | chr2_4:12114333-12114352 | Msa0315630:intron | 50.0% | |
| AAGGAAGAGAAAGTGGCGGT+TGG | - | chr2_4:12114337-12114356 | Msa0315630:intron | 50.0% | |
| ACTTCACGCAGAAGCTCTTG+TGG | + | chr2_4:12114397-12114416 | None:intergenic | 50.0% | |
| TCTTCTCCGAATTGAGGCCT+CGG | - | chr2_4:12114417-12114436 | Msa0315630:intron | 50.0% | |
| CACGCAACAACGTTCTTCCT+CGG | + | chr2_4:12114457-12114476 | None:intergenic | 50.0% | |
| AAGAACGTTGTTGCGTGTGC+TGG | - | chr2_4:12114460-12114479 | Msa0315630:intron | 50.0% | |
| GGTAAGCGTCCTGTAGTAAG+AGG | + | chr2_4:12115592-12115611 | None:intergenic | 50.0% | |
| TAGAGAATCACACGCAGAGC+CGG | + | chr2_4:12115631-12115650 | None:intergenic | 50.0% | |
| TCATGTTGTTGTCGGACACC+GGG | + | chr2_4:12115754-12115773 | None:intergenic | 50.0% | |
| GTCATGTTGTTGTCGGACAC+CGG | + | chr2_4:12115755-12115774 | None:intergenic | 50.0% | |
| GGCTCCATAAGATGCCTCTT+TGG | - | chr2_4:12115986-12116005 | Msa0315630:intron | 50.0% | |
| !! | GGCGAATAATTTTGGCAGCC+TGG | - | chr2_4:12116199-12116218 | Msa0315630:intron | 50.0% |
| !! | AATTTTGGCAGCCTGGTCCA+AGG | - | chr2_4:12116206-12116225 | Msa0315630:intron | 50.0% |
| !! | ATTTTGGCAGCCTGGTCCAA+GGG | - | chr2_4:12116207-12116226 | Msa0315630:intron | 50.0% |
| ATTCAGCGCTAGGTGATGAC+GGG | - | chr2_4:12116409-12116428 | Msa0315630:intron | 50.0% | |
| !! | TGATGACGGGAAGTTCCTTC+TGG | - | chr2_4:12116422-12116441 | Msa0315630:intron | 50.0% |
| TACATTTGCGTGCAGCCAGA+AGG | + | chr2_4:12116440-12116459 | None:intergenic | 50.0% | |
| GACGCAGATGATATGTCCAG+GGG | - | chr2_4:12116495-12116514 | Msa0315630:intron | 50.0% | |
| TAGTTGCCTGTTGGGACCTT+GGG | + | chr2_4:12116760-12116779 | None:intergenic | 50.0% | |
| ATAGTTGCCTGTTGGGACCT+TGG | + | chr2_4:12116761-12116780 | None:intergenic | 50.0% | |
| CCACTGGATAGTTGCCTGTT+GGG | + | chr2_4:12116768-12116787 | None:intergenic | 50.0% | |
| ! | CCTGGTTCGATTGAAGAGGA+TGG | + | chr2_4:12117273-12117292 | None:intergenic | 50.0% |
| CCATCCTCTTCAATCGAACC+AGG | - | chr2_4:12117270-12117289 | Msa0315630:intron | 50.0% | |
| TCCTCTTCAATCGAACCAGG+TGG | - | chr2_4:12117273-12117292 | Msa0315630:intron | 50.0% | |
| TCTCTATCCGGACCTCTTGT+TGG | - | chr2_4:12117393-12117412 | Msa0315630:intron | 50.0% | |
| TGAAAAACAAGGCTCCGAGG+TGG | - | chr2_4:12117442-12117461 | Msa0315630:intron | 50.0% | |
| CTGGTGGCTTCTGCAGAAAA+TGG | - | chr2_4:12117537-12117556 | Msa0315630:intron | 50.0% | |
| AGACCCTACCCAATGGGATA+AGG | + | chr2_4:12118143-12118162 | None:intergenic | 50.0% | |
| TGTAGCAGACCCTACCCAAT+GGG | + | chr2_4:12118149-12118168 | None:intergenic | 50.0% | |
| ATGTAGCAGACCCTACCCAA+TGG | + | chr2_4:12118150-12118169 | None:intergenic | 50.0% | |
| ! | TTATTCGTTTGCTGCCCGTG+AGG | - | chr2_4:12118276-12118295 | Msa0315630:CDS | 50.0% |
| TGCCCGTGAGGATAAACAGT+GGG | - | chr2_4:12118288-12118307 | Msa0315630:CDS | 50.0% | |
| CTCCCACTGTTTATCCTCAC+GGG | + | chr2_4:12118293-12118312 | None:intergenic | 50.0% | |
| CCTCCCACTGTTTATCCTCA+CGG | + | chr2_4:12118294-12118313 | None:intergenic | 50.0% | |
| ATTCCATGCAGTCAGCACGT+TGG | - | chr2_4:12118355-12118374 | Msa0315630:CDS | 50.0% | |
| !! | GATGGTGGAGGAGAGCACAT+AGG | + | chr2_4:12113820-12113839 | None:intergenic | 55.0% |
| !! | GCAAAGAGTAGTGGTGGTGG+CGG | - | chr2_4:12114312-12114331 | Msa0315630:intron | 55.0% |
| GGCGGAGAAGGAAGAGAAAG+TGG | - | chr2_4:12114330-12114349 | Msa0315630:intron | 55.0% | |
| TGGCGGTTGGCGACAGTTTA+CGG | - | chr2_4:12114350-12114369 | Msa0315630:intron | 55.0% | |
| TGTCCTCCGAGGCCTCAATT+CGG | + | chr2_4:12114426-12114445 | None:intergenic | 55.0% | |
| GCAACAACGTTCTTCCTCGG+CGG | + | chr2_4:12114454-12114473 | None:intergenic | 55.0% | |
| TTGCGTGTGCTGGAGTGTGT+AGG | - | chr2_4:12114470-12114489 | Msa0315630:intron | 55.0% | |
| GTGCTGGAGTGTGTAGGAGT+TGG | - | chr2_4:12114476-12114495 | Msa0315630:intron | 55.0% | |
| ! | GCCGGAGCTAAACGTTGGTT+AGG | + | chr2_4:12115613-12115632 | None:intergenic | 55.0% |
| AGACACTAACACGTCGACGC+CGG | + | chr2_4:12115823-12115842 | None:intergenic | 55.0% | |
| AGGAGATTCTCCCTTGGACC+AGG | + | chr2_4:12116220-12116239 | None:intergenic | 55.0% | |
| GTTTCACCCAAGGTCCCAAC+AGG | - | chr2_4:12116751-12116770 | Msa0315630:intron | 55.0% | |
| CCCAACAGGCAACTATCCAG+TGG | - | chr2_4:12116765-12116784 | Msa0315630:intron | 55.0% | |
| GCCACTGGATAGTTGCCTGT+TGG | + | chr2_4:12116769-12116788 | None:intergenic | 55.0% | |
| ATATTGCAAGCAGGGGGCCA+AGG | - | chr2_4:12117220-12117239 | Msa0315630:intron | 55.0% | |
| ! | GCCACCTGGTTCGATTGAAG+AGG | + | chr2_4:12117277-12117296 | None:intergenic | 55.0% |
| TGGACGGGTGACAATTGCCT+CGG | - | chr2_4:12117500-12117519 | Msa0315630:intron | 55.0% | |
| CTGCCCGTGAGGATAAACAG+TGG | - | chr2_4:12118287-12118306 | Msa0315630:CDS | 55.0% | |
| CCGTGAGGATAAACAGTGGG+AGG | - | chr2_4:12118291-12118310 | Msa0315630:CDS | 55.0% | |
| ATCAGCATGTCGGTGGTCGT+TGG | + | chr2_4:12118482-12118501 | None:intergenic | 55.0% | |
| TCACGCAATCAGCATGTCGG+TGG | + | chr2_4:12118489-12118508 | None:intergenic | 55.0% | |
| !! | AGTAGTGGTGGTGGCGGAGA+AGG | - | chr2_4:12114318-12114337 | Msa0315630:intron | 60.0% |
| TCTCCGAATTGAGGCCTCGG+AGG | - | chr2_4:12114420-12114439 | Msa0315630:intron | 60.0% | |
| GCAGAGCCGGAGCTAAACGT+TGG | + | chr2_4:12115618-12115637 | None:intergenic | 60.0% | |
| TTGCTCCTGCATGAGGTGGC+TGG | + | chr2_4:12116687-12116706 | None:intergenic | 60.0% | |
| TGTGTAGGAGCTACGCCACC+TGG | + | chr2_4:12117291-12117310 | None:intergenic | 60.0% | |
| TGCAGCTGCTCATGCCACCT+CGG | + | chr2_4:12117459-12117478 | None:intergenic | 60.0% | |
| GGCATGAGCAGCTGCAGTGT+TGG | - | chr2_4:12117463-12117482 | Msa0315630:intron | 60.0% | |
| !! | CCACCAACGTGCTGACTGCA+TGG | + | chr2_4:12118361-12118380 | None:intergenic | 60.0% |
| CCATGCAGTCAGCACGTTGG+TGG | - | chr2_4:12118358-12118377 | Msa0315630:CDS | 60.0% | |
| TTGAGGCCTCGGAGGACACG+TGG | - | chr2_4:12114428-12114447 | Msa0315630:intron | 65.0% | |
| GACGGCCAGCCACCTCATGC+AGG | - | chr2_4:12116679-12116698 | Msa0315630:intron | 70.0% | |
| ! | CGGCGGCCACGTGTCCTCCG+AGG | + | chr2_4:12114437-12114456 | None:intergenic | 80.0% |
| ! | CGGAGGACACGTGGCCGCCG+AGG | - | chr2_4:12114437-12114456 | Msa0315630:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 12113783 | 12119045 | 12113783 | ID=Msa0315630;Name=Msa0315630 |
| chr2_4 | mRNA | 12113783 | 12119045 | 12113783 | ID=Msa0315630-mRNA-1;Parent=Msa0315630;Name=Msa0315630-mRNA-1;_AED=0.15;_eAED=0.15;_QI=485|0.8|0.83|1|0.8|0.66|6|391|362 |
| chr2_4 | exon | 12113783 | 12114157 | 12113783 | ID=Msa0315630-mRNA-1:exon:4705;Parent=Msa0315630-mRNA-1 |
| chr2_4 | exon | 12115102 | 12115595 | 12115102 | ID=Msa0315630-mRNA-1:exon:4704;Parent=Msa0315630-mRNA-1 |
| chr2_4 | exon | 12116097 | 12116183 | 12116097 | ID=Msa0315630-mRNA-1:exon:4703;Parent=Msa0315630-mRNA-1 |
| chr2_4 | exon | 12116284 | 12116413 | 12116284 | ID=Msa0315630-mRNA-1:exon:4702;Parent=Msa0315630-mRNA-1 |
| chr2_4 | exon | 12116524 | 12116611 | 12116524 | ID=Msa0315630-mRNA-1:exon:4701;Parent=Msa0315630-mRNA-1 |
| chr2_4 | exon | 12118255 | 12119045 | 12118255 | ID=Msa0315630-mRNA-1:exon:4700;Parent=Msa0315630-mRNA-1 |
| chr2_4 | five_prime_UTR | 12118561 | 12119045 | 12118561 | ID=Msa0315630-mRNA-1:five_prime_utr;Parent=Msa0315630-mRNA-1 |
| chr2_4 | CDS | 12118255 | 12118560 | 12118255 | ID=Msa0315630-mRNA-1:cds;Parent=Msa0315630-mRNA-1 |
| chr2_4 | CDS | 12116524 | 12116611 | 12116524 | ID=Msa0315630-mRNA-1:cds;Parent=Msa0315630-mRNA-1 |
| chr2_4 | CDS | 12116284 | 12116413 | 12116284 | ID=Msa0315630-mRNA-1:cds;Parent=Msa0315630-mRNA-1 |
| chr2_4 | CDS | 12116097 | 12116183 | 12116097 | ID=Msa0315630-mRNA-1:cds;Parent=Msa0315630-mRNA-1 |
| chr2_4 | CDS | 12115118 | 12115595 | 12115118 | ID=Msa0315630-mRNA-1:cds;Parent=Msa0315630-mRNA-1 |
| chr2_4 | three_prime_UTR | 12115102 | 12115117 | 12115102 | ID=Msa0315630-mRNA-1:three_prime_utr;Parent=Msa0315630-mRNA-1 |
| chr2_4 | three_prime_UTR | 12113783 | 12114157 | 12113783 | ID=Msa0315630-mRNA-1:three_prime_utr;Parent=Msa0315630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
