Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274920 | XP_003594006.1 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274920 | sp|Q10LG8|TLP6_ORYSJ | 65.278 | 360 | 91 | 3 | 34 | 362 | 47 | 403 | 1.59e-173 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274920 | G7ISK0 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0274920 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195050 | Msa0274920 | 0.974332 | 5.705724e-138 | -8.615850e-47 |
| Msa0274920 | Msa0315630 | 0.993674 | 2.123762e-201 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274920 | MtrunA17_Chr2g0286441 | 91.603 | 393 | 2 | 1 | 1 | 362 | 1 | 393 | 0.0 | 736 |
| Msa0274920 | MtrunA17_Chr1g0196071 | 62.857 | 385 | 107 | 4 | 11 | 362 | 21 | 402 | 7.89e-175 | 491 |
| Msa0274920 | MtrunA17_Chr2g0278511 | 53.826 | 379 | 125 | 7 | 34 | 362 | 49 | 427 | 5.59e-137 | 396 |
| Msa0274920 | MtrunA17_Chr1g0201891 | 53.385 | 384 | 124 | 7 | 34 | 362 | 48 | 431 | 3.96e-134 | 389 |
| Msa0274920 | MtrunA17_Chr5g0404321 | 52.800 | 375 | 127 | 5 | 32 | 362 | 48 | 416 | 3.45e-131 | 381 |
| Msa0274920 | MtrunA17_Chr8g0373001 | 53.117 | 369 | 133 | 4 | 32 | 362 | 46 | 412 | 7.23e-131 | 380 |
| Msa0274920 | MtrunA17_Chr1g0155301 | 54.722 | 360 | 120 | 5 | 39 | 362 | 70 | 422 | 5.62e-130 | 379 |
| Msa0274920 | MtrunA17_Chr2g0315641 | 49.728 | 368 | 148 | 6 | 16 | 362 | 20 | 371 | 2.37e-118 | 347 |
| Msa0274920 | MtrunA17_Chr2g0315651 | 44.838 | 339 | 164 | 6 | 39 | 362 | 37 | 367 | 6.73e-93 | 282 |
| Msa0274920 | MtrunA17_Chr8g0373361 | 41.322 | 363 | 166 | 8 | 32 | 355 | 51 | 405 | 6.23e-80 | 250 |
| Msa0274920 | MtrunA17_Chr8g0373331 | 35.278 | 360 | 137 | 8 | 32 | 353 | 45 | 346 | 2.54e-61 | 200 |
| Msa0274920 | MtrunA17_Chr1g0156151 | 58.904 | 146 | 56 | 1 | 54 | 195 | 66 | 211 | 1.43e-53 | 176 |
| Msa0274920 | MtrunA17_Chr8g0373341 | 38.507 | 335 | 121 | 10 | 39 | 352 | 50 | 320 | 2.61e-52 | 176 |
| Msa0274920 | MtrunA17_Chr8g0373351 | 32.967 | 364 | 114 | 10 | 32 | 354 | 12 | 286 | 5.88e-47 | 161 |
| Msa0274920 | MtrunA17_Chr3g0091401 | 42.268 | 97 | 50 | 1 | 82 | 178 | 9 | 99 | 1.31e-15 | 72.0 |
| Msa0274920 | MtrunA17_Chr2g0334041 | 27.731 | 238 | 137 | 11 | 134 | 361 | 147 | 359 | 1.61e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274920 | AT2G47900.2 | 64.752 | 383 | 97 | 5 | 12 | 362 | 30 | 406 | 1.85e-173 | 489 |
| Msa0274920 | AT2G47900.1 | 64.752 | 383 | 97 | 5 | 12 | 362 | 30 | 406 | 1.85e-173 | 489 |
| Msa0274920 | AT2G47900.3 | 64.583 | 384 | 97 | 5 | 12 | 362 | 30 | 407 | 2.09e-173 | 488 |
| Msa0274920 | AT3G06380.1 | 55.270 | 389 | 133 | 7 | 4 | 362 | 3 | 380 | 8.73e-143 | 410 |
| Msa0274920 | AT5G18680.1 | 53.750 | 400 | 131 | 9 | 4 | 362 | 3 | 389 | 2.31e-140 | 404 |
| Msa0274920 | AT2G18280.2 | 53.994 | 363 | 125 | 6 | 32 | 362 | 41 | 393 | 3.52e-128 | 373 |
| Msa0274920 | AT2G18280.1 | 53.994 | 363 | 125 | 6 | 32 | 362 | 41 | 393 | 3.52e-128 | 373 |
| Msa0274920 | AT1G47270.3 | 51.515 | 363 | 133 | 5 | 32 | 362 | 37 | 388 | 4.25e-127 | 370 |
| Msa0274920 | AT1G47270.2 | 51.515 | 363 | 133 | 5 | 32 | 362 | 61 | 412 | 6.01e-127 | 371 |
| Msa0274920 | AT1G47270.1 | 51.515 | 363 | 133 | 5 | 32 | 362 | 62 | 413 | 8.06e-127 | 370 |
| Msa0274920 | AT1G43640.1 | 47.901 | 405 | 146 | 10 | 14 | 362 | 34 | 429 | 6.74e-126 | 369 |
| Msa0274920 | AT1G76900.2 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0274920 | AT1G76900.1 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0274920 | AT1G76900.3 | 48.463 | 423 | 137 | 8 | 17 | 362 | 37 | 455 | 6.96e-126 | 370 |
| Msa0274920 | AT1G25280.1 | 51.646 | 395 | 122 | 9 | 34 | 362 | 54 | 445 | 3.71e-124 | 365 |
| Msa0274920 | AT1G43640.2 | 49.454 | 366 | 124 | 9 | 53 | 362 | 3 | 363 | 8.52e-119 | 348 |
| Msa0274920 | AT1G53320.1 | 45.736 | 387 | 168 | 6 | 3 | 362 | 8 | 379 | 7.01e-109 | 323 |
| Msa0274920 | AT5G18680.2 | 54.369 | 309 | 89 | 7 | 93 | 362 | 2 | 297 | 1.95e-106 | 314 |
| Msa0274920 | AT3G06380.2 | 56.897 | 290 | 90 | 5 | 102 | 362 | 5 | 288 | 1.31e-104 | 309 |
| Msa0274920 | AT1G25280.3 | 49.259 | 270 | 69 | 8 | 158 | 362 | 1 | 267 | 9.12e-73 | 227 |
| Msa0274920 | AT1G25280.2 | 49.259 | 270 | 69 | 8 | 158 | 362 | 1 | 267 | 9.12e-73 | 227 |
| Msa0274920 | AT1G61940.2 | 68.605 | 86 | 27 | 0 | 42 | 127 | 1 | 86 | 1.50e-36 | 133 |
| Msa0274920 | AT1G61940.1 | 70.492 | 61 | 18 | 0 | 42 | 102 | 1 | 61 | 1.74e-22 | 95.5 |
| Msa0274920 | AT1G61940.1 | 43.564 | 101 | 32 | 5 | 207 | 306 | 102 | 178 | 2.83e-13 | 69.3 |
Find 128 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATCATAGCTGAAATTTC+AGG | 0.195471 | 2_3:+6775017 | None:intergenic |
| GACAAGATTATTCTGCAATT+TGG | 0.212541 | 2_3:-6771967 | Msa0274920:CDS |
| ATACCCTATTTCGGCATTTC+AGG | 0.216986 | 2_3:-6771908 | Msa0274920:CDS |
| TCGTGTGCAGCACCTTATTA+TGG | 0.239324 | 2_3:+6770764 | None:intergenic |
| AATGCCTGAAATGCCGAAAT+AGG | 0.239475 | 2_3:+6771904 | None:intergenic |
| GGTGGAACCGAAATCGAAAT+TGG | 0.239615 | 2_3:-6775311 | Msa0274920:five_prime_UTR |
| TTTCAAAATCAGTAACAAAT+TGG | 0.270566 | 2_3:-6770525 | Msa0274920:three_prime_UTR |
| TGGCGGTTGGCGACAGTTTA+CGG | 0.281341 | 2_3:-6775196 | Msa0274920:CDS |
| CAGATCGCCAATTTCGATTT+CGG | 0.295293 | 2_3:+6775304 | None:intergenic |
| GAAAACCTGTTTAACAGAAA+TGG | 0.297610 | 2_3:+6774989 | None:intergenic |
| CTCTTATTCACAAGCAATCT+TGG | 0.300510 | 2_3:+6771855 | None:intergenic |
| TCTCAGATTGTGATCTAATC+TGG | 0.312471 | 2_3:+6770868 | None:intergenic |
| GTTCTACTGAATCCATAATA+AGG | 0.331885 | 2_3:-6770776 | Msa0274920:three_prime_UTR |
| TGGAAGAGACAAGAAGTTAA+AGG | 0.343035 | 2_3:+6775679 | None:intergenic |
| AAAACCTGTTTAACAGAAAT+GGG | 0.345752 | 2_3:+6774990 | None:intergenic |
| CTTCATAAATACTTTCTCAT+TGG | 0.351432 | 2_3:+6770812 | None:intergenic |
| ATTCTGCAATTTGGAAAAGT+TGG | 0.358632 | 2_3:-6771958 | Msa0274920:CDS |
| TTTCCCCATTTCTGTTAAAC+AGG | 0.366547 | 2_3:-6774994 | Msa0274920:intron |
| GGATTTCCGATACCCTATTT+CGG | 0.372729 | 2_3:-6771917 | Msa0274920:CDS |
| AGTAGTGGTGGTGGCGGAGA+AGG | 0.373376 | 2_3:-6775228 | Msa0274920:CDS |
| CTGGTGGCTTCTGCAGAAAA+TGG | 0.375077 | 2_3:-6772009 | Msa0274920:CDS |
| CGAAATCGAAATTGGCGATC+TGG | 0.382016 | 2_3:-6775303 | Msa0274920:five_prime_UTR |
| TCCTTAAGATCAAATTTCCT+TGG | 0.391394 | 2_3:-6772909 | Msa0274920:intron |
| AACATAGTTGTTGCTTCCCC+TGG | 0.398674 | 2_3:+6773035 | None:intergenic |
| GAATAAGAGCATGTTTAAAC+AGG | 0.410840 | 2_3:-6771841 | Msa0274920:intron |
| AAAGTATTTATGAAGATGAT+TGG | 0.413949 | 2_3:-6770804 | Msa0274920:three_prime_UTR |
| ACAGTTTACGGCAGAGTTGT+TGG | 0.415866 | 2_3:-6775184 | Msa0274920:CDS |
| TTCTGCAATTTGGAAAAGTT+GGG | 0.417811 | 2_3:-6771957 | Msa0274920:CDS |
| TCTCTATCCGGACCTCTTGT+TGG | 0.419329 | 2_3:-6772153 | Msa0274920:CDS |
| TGATGACGGGAAGTTCCTTC+TGG | 0.420704 | 2_3:-6773124 | Msa0274920:CDS |
| TTACTAAAAGTCGTTCTACT+AGG | 0.428715 | 2_3:-6772836 | Msa0274920:intron |
| AGAATAATCTTGTCGTGTTC+CGG | 0.431735 | 2_3:+6771976 | None:intergenic |
| CAGTTTACGGCAGAGTTGTT+GGG | 0.438166 | 2_3:-6775183 | Msa0274920:CDS |
| ATGCCTGAAATGCCGAAATA+GGG | 0.443678 | 2_3:+6771905 | None:intergenic |
| AAGAACGTTGTTGCGTGTGC+TGG | 0.445764 | 2_3:-6775086 | Msa0274920:CDS |
| TTGCTCCTGCATGAGGTGGC+TGG | 0.453181 | 2_3:+6772862 | None:intergenic |
| TTTGATGATTTGTCTGAGAA+AGG | 0.460293 | 2_3:+6775536 | None:intergenic |
| GGTTGGTTGTTTCAAGATGG+TGG | 0.472819 | 2_3:+6775714 | None:intergenic |
| GGCATGAGCAGCTGCAGTGT+TGG | 0.476628 | 2_3:-6772083 | Msa0274920:CDS |
| GGGGAAGCAACAACTATGTT+GGG | 0.477342 | 2_3:-6773032 | Msa0274920:CDS |
| TCTGCAGAAAATGGAACAGC+TGG | 0.479879 | 2_3:-6772000 | Msa0274920:CDS |
| CGAAATTGGCGATCTGGGTA+TGG | 0.481674 | 2_3:-6775297 | Msa0274920:exon |
| TGCGCTTTATAAAGCATTGA+AGG | 0.484376 | 2_3:+6773309 | None:intergenic |
| AGGAGATTCTCCCTTGGACC+AGG | 0.489762 | 2_3:+6773329 | None:intergenic |
| GAAATCGAAATTGGCGATCT+GGG | 0.491064 | 2_3:-6775302 | Msa0274920:five_prime_UTR |
| AATAATATGTTTGAGTGGAC+CGG | 0.492380 | 2_3:+6773285 | None:intergenic |
| GGAATAATTTACACGAATGA+AGG | 0.496581 | 2_3:+6770685 | None:intergenic |
| TCTTCTCCGAATTGAGGCCT+CGG | 0.497256 | 2_3:-6775129 | Msa0274920:CDS |
| AATGCTTTATAAAGCGCAAC+CGG | 0.499079 | 2_3:-6773304 | Msa0274920:CDS |
| TGAAGTTCTTCTCCGAATTG+AGG | 0.501294 | 2_3:-6775135 | Msa0274920:CDS |
| TGGGAAGGATTTGTTTACAA+TGG | 0.502527 | 2_3:-6771938 | Msa0274920:CDS |
| GACGGCCAGCCACCTCATGC+AGG | 0.508409 | 2_3:-6772867 | Msa0274920:CDS |
| AGGGGAAGCAACAACTATGT+TGG | 0.508852 | 2_3:-6773033 | Msa0274920:CDS |
| TAAAAGTGTTGCGTTGATTG+AGG | 0.511529 | 2_3:+6775387 | None:intergenic |
| TTTATCGCCAACAAGAGGTC+CGG | 0.512577 | 2_3:+6772146 | None:intergenic |
| ACACATGAGATAAGAAGAGT+TGG | 0.513014 | 2_3:+6775659 | None:intergenic |
| TGCAGCTGCTCATGCCACCT+CGG | 0.519909 | 2_3:+6772090 | None:intergenic |
| AGAAAATGGAACAGCTGGAC+CGG | 0.520515 | 2_3:-6771995 | Msa0274920:CDS |
| ACAACTATGTTGGGAAATTG+AGG | 0.521031 | 2_3:-6773023 | Msa0274920:intron |
| TAGACGCAGATGATATGTCC+AGG | 0.522084 | 2_3:-6773053 | Msa0274920:CDS |
| ATTTGTCTGAGAAAGGAAAA+GGG | 0.526002 | 2_3:+6775543 | None:intergenic |
| GTGGTAGAGAACTCTCTATC+CGG | 0.528357 | 2_3:-6772165 | Msa0274920:CDS |
| ATGACACAGTGCATTCTCCT+TGG | 0.528561 | 2_3:+6772309 | None:intergenic |
| TACTCGCAATAACATAATAA+CGG | 0.535052 | 2_3:-6770563 | Msa0274920:three_prime_UTR |
| TCATGTCTTCGATTATGTTG+CGG | 0.535725 | 2_3:+6775267 | None:intergenic |
| TTCGATTGAAGAGGATGGAA+TGG | 0.537253 | 2_3:+6772281 | None:intergenic |
| AGATAGTGAACTTTGTTCCA+AGG | 0.538026 | 2_3:+6772892 | None:intergenic |
| TGTCCTCCGAGGCCTCAATT+CGG | 0.540412 | 2_3:+6775123 | None:intergenic |
| ATTCAGCGCTAGGTGATGAC+GGG | 0.542238 | 2_3:-6773137 | Msa0274920:intron |
| AAAGGTAGGTACATGATGGT+TGG | 0.542875 | 2_3:+6775697 | None:intergenic |
| AGAGAAAACTCAGTTTGTGT+AGG | 0.543872 | 2_3:+6772243 | None:intergenic |
| AAAAGTGTTGCGTTGATTGA+GGG | 0.544347 | 2_3:+6775388 | None:intergenic |
| AATTCAGCGCTAGGTGATGA+CGG | 0.546541 | 2_3:-6773138 | Msa0274920:intron |
| AAGGAGAATGCACTGTGTCA+TGG | 0.546764 | 2_3:-6772307 | Msa0274920:CDS |
| GATTTGTCTGAGAAAGGAAA+AGG | 0.547431 | 2_3:+6775542 | None:intergenic |
| ATGATATAATCTGTGCATGT+AGG | 0.547626 | 2_3:+6773081 | None:intergenic |
| TGTGTAGGAGCTACGCCACC+TGG | 0.549577 | 2_3:+6772258 | None:intergenic |
| GAGAAAGGAAAAGGGTGAGA+AGG | 0.550884 | 2_3:+6775551 | None:intergenic |
| GCAATTTGGAAAAGTTGGGA+AGG | 0.553649 | 2_3:-6771953 | Msa0274920:CDS |
| ACTTCACGCAGAAGCTCTTG+TGG | 0.562675 | 2_3:+6775152 | None:intergenic |
| CCATCCTCTTCAATCGAACC+AGG | 0.562739 | 2_3:-6772276 | Msa0274920:CDS |
| CATTGAAGGAGATTCTCCCT+TGG | 0.563702 | 2_3:+6773323 | None:intergenic |
| GATGGTTGGTTGTTTCAAGA+TGG | 0.564154 | 2_3:+6775711 | None:intergenic |
| CACGCAACAACGTTCTTCCT+CGG | 0.565317 | 2_3:+6775092 | None:intergenic |
| GTGCTGGAGTGTGTAGGAGT+TGG | 0.567870 | 2_3:-6775070 | Msa0274920:CDS |
| GGCGGAGAAGGAAGAGAAAG+TGG | 0.570148 | 2_3:-6775216 | Msa0274920:CDS |
| CCTGGTTCGATTGAAGAGGA+TGG | 0.573458 | 2_3:+6772276 | None:intergenic |
| TATGATTGTGTGTGAAGAAG+AGG | 0.579866 | 2_3:+6775589 | None:intergenic |
| TACATTTGCGTGCAGCCAGA+AGG | 0.580300 | 2_3:+6773109 | None:intergenic |
| TGGACGGGTGACAATTGCCT+CGG | 0.581243 | 2_3:-6772046 | Msa0274920:CDS |
| TGGTTGTTTCAAGATGGTGG+AGG | 0.581795 | 2_3:+6775717 | None:intergenic |
| AAGGAAGAGAAAGTGGCGGT+TGG | 0.582497 | 2_3:-6775209 | Msa0274920:CDS |
| AGTTAAAGGTAGGTACATGA+TGG | 0.588350 | 2_3:+6775693 | None:intergenic |
| ATCGCAAAGAGTAGTGGTGG+TGG | 0.589679 | 2_3:-6775237 | Msa0274920:CDS |
| TTGCGTGTGCTGGAGTGTGT+AGG | 0.591079 | 2_3:-6775076 | Msa0274920:CDS |
| CGGAGGACACGTGGCCGCCG+AGG | 0.594437 | 2_3:-6775109 | Msa0274920:CDS |
| TATGTTTGAATGTCACTTGG+TGG | 0.595420 | 2_3:-6770843 | Msa0274920:three_prime_UTR |
| GCAAAGAGTAGTGGTGGTGG+CGG | 0.599034 | 2_3:-6775234 | Msa0274920:CDS |
| CTTGTTGGCGATAAAAGAGA+TGG | 0.602960 | 2_3:-6772138 | Msa0274920:CDS |
| GAAATGCCGAAATAGGGTAT+CGG | 0.603573 | 2_3:+6771911 | None:intergenic |
| CCGATCAAAATCAAATCGTG+TGG | 0.606213 | 2_3:-6772184 | Msa0274920:CDS |
| AAGAATTTATGTACAGCACA+AGG | 0.606359 | 2_3:+6770662 | None:intergenic |
| GAATTTATGTACAGCACAAG+GGG | 0.607071 | 2_3:+6770664 | None:intergenic |
| TATTTATGAAGATGATTGGA+TGG | 0.607206 | 2_3:-6770800 | Msa0274920:three_prime_UTR |
| TTGAGGCCTCGGAGGACACG+TGG | 0.607574 | 2_3:-6775118 | Msa0274920:CDS |
| GCCACCTGGTTCGATTGAAG+AGG | 0.610396 | 2_3:+6772272 | None:intergenic |
| AAACAAATAATATGTTTGAG+TGG | 0.611039 | 2_3:+6773280 | None:intergenic |
| AGCACATAGGATCTCAAAGT+GGG | 0.611741 | 2_3:+6775742 | None:intergenic |
| AGAGACAAGAAGTTAAAGGT+AGG | 0.613029 | 2_3:+6775683 | None:intergenic |
| AGACGCAGATGATATGTCCA+GGG | 0.615218 | 2_3:-6773052 | Msa0274920:CDS |
| ATCAAGATCGCAAAGAGTAG+TGG | 0.616284 | 2_3:-6775243 | Msa0274920:CDS |
| ATGTTTGAATGTCACTTGGT+GGG | 0.623108 | 2_3:-6770842 | Msa0274920:three_prime_UTR |
| ACAAAGTTCACTATCTATGA+CGG | 0.627271 | 2_3:-6772885 | Msa0274920:CDS |
| AGAATTTATGTACAGCACAA+GGG | 0.629375 | 2_3:+6770663 | None:intergenic |
| AAAGTGTTGCGTTGATTGAG+GGG | 0.634514 | 2_3:+6775389 | None:intergenic |
| TCTCCGAATTGAGGCCTCGG+AGG | 0.639401 | 2_3:-6775126 | Msa0274920:CDS |
| AAATATGTTTGAATGTCACT+TGG | 0.642156 | 2_3:-6770846 | Msa0274920:three_prime_UTR |
| GATGGTGGAGGAGAGCACAT+AGG | 0.644366 | 2_3:+6775729 | None:intergenic |
| AAGATCGCAAAGAGTAGTGG+TGG | 0.644592 | 2_3:-6775240 | Msa0274920:CDS |
| CGGCGGCCACGTGTCCTCCG+AGG | 0.663112 | 2_3:+6775112 | None:intergenic |
| TCTTGGTATCAAAGCTGCTG+AGG | 0.664183 | 2_3:+6771872 | None:intergenic |
| GATTGTGTGTGAAGAAGAGG+TGG | 0.672482 | 2_3:+6775592 | None:intergenic |
| AAACCTGTTTAACAGAAATG+GGG | 0.674456 | 2_3:+6774991 | None:intergenic |
| GAGCACATAGGATCTCAAAG+TGG | 0.685835 | 2_3:+6775741 | None:intergenic |
| TCCTCTTCAATCGAACCAGG+TGG | 0.710835 | 2_3:-6772273 | Msa0274920:CDS |
| GACGCAGATGATATGTCCAG+GGG | 0.717675 | 2_3:-6773051 | Msa0274920:CDS |
| GCAACAACGTTCTTCCTCGG+CGG | 0.717767 | 2_3:+6775095 | None:intergenic |
| GGAGAAGGAAGAGAAAGTGG+CGG | 0.735942 | 2_3:-6775213 | Msa0274920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATATTATTAATTTTCT+GGG | - | chr2_3:6774587-6774606 | Msa0274920:intron | 10.0% |
| !!! | TATATATTATTAATTTTCTG+GGG | - | chr2_3:6774588-6774607 | Msa0274920:intron | 10.0% |
| !!! | ATAAAACAATTTGTTTTATT+TGG | - | chr2_3:6774635-6774654 | Msa0274920:intron | 10.0% |
| !! | TTAAAAAAGTGATTTATGTT+TGG | - | chr2_3:6771452-6771471 | Msa0274920:intron | 15.0% |
| !! | ATATAATTATGTGGATATAA+TGG | + | chr2_3:6772128-6772147 | None:intergenic | 15.0% |
| !! | ATATAGAACATATAATTATG+TGG | + | chr2_3:6772137-6772156 | None:intergenic | 15.0% |
| !! | AATGTAATACTAAATTACTA+AGG | + | chr2_3:6772879-6772898 | None:intergenic | 15.0% |
| !! | GCAAAAATATAAAACAATAA+CGG | + | chr2_3:6773317-6773336 | None:intergenic | 15.0% |
| !! | TTAAGGAAGAATAAAAAAAA+AGG | + | chr2_3:6773364-6773383 | None:intergenic | 15.0% |
| !! | TGTTAAAAATTGATTAAAAC+TGG | - | chr2_3:6774487-6774506 | Msa0274920:intron | 15.0% |
| !!! | GGTATATATTATTAATTTTC+TGG | - | chr2_3:6774586-6774605 | Msa0274920:intron | 15.0% |
| !! | AACTATTAAGAAAGATTTAA+AGG | + | chr2_3:6774978-6774997 | None:intergenic | 15.0% |
| !! | TTAAATCTTTCTTAATAGTT+TGG | - | chr2_3:6774978-6774997 | Msa0274920:intron | 15.0% |
| !!! | TTAACAATATGATTTTCATT+TGG | - | chr2_3:6775670-6775689 | Msa0274920:five_prime_UTR | 15.0% |
| !!! | TGATTTTTTGAAGAAGAAAA+GGG | + | chr2_3:6770822-6770841 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTGAAGAAGAAA+AGG | + | chr2_3:6770823-6770842 | None:intergenic | 20.0% |
| !!! | TTTGCATTATTTTACCTTAT+GGG | + | chr2_3:6770858-6770877 | None:intergenic | 20.0% |
| !!! | TTTTGCATTATTTTACCTTA+TGG | + | chr2_3:6770859-6770878 | None:intergenic | 20.0% |
| !! | ATTGTTTAGATATTGTGTAA+AGG | - | chr2_3:6771503-6771522 | Msa0274920:intron | 20.0% |
| !! | ATTTAGCATGATTAATTGTT+TGG | - | chr2_3:6771607-6771626 | Msa0274920:intron | 20.0% |
| !!! | ACCAAATTTTATGTTTATCT+TGG | - | chr2_3:6771701-6771720 | Msa0274920:intron | 20.0% |
| !! | ACCAAGATAAACATAAAATT+TGG | + | chr2_3:6771705-6771724 | None:intergenic | 20.0% |
| !! | TACTTAATAGAGTTACATAT+TGG | + | chr2_3:6771889-6771908 | None:intergenic | 20.0% |
| !! | ATAAAAATAACAGATCCAAT+GGG | + | chr2_3:6771969-6771988 | None:intergenic | 20.0% |
| !! | TATAAAAATAACAGATCCAA+TGG | + | chr2_3:6771970-6771989 | None:intergenic | 20.0% |
| !!! | ATGTTATTAATGGATAATGT+AGG | - | chr2_3:6772072-6772091 | Msa0274920:CDS | 20.0% |
| !!! | TGTTATTAATGGATAATGTA+GGG | - | chr2_3:6772073-6772092 | Msa0274920:CDS | 20.0% |
| !! | AACTTAATATCACAATTTAG+CGG | + | chr2_3:6772177-6772196 | None:intergenic | 20.0% |
| !! | AAACAAATAATATGTTTGAG+TGG | + | chr2_3:6773009-6773028 | None:intergenic | 20.0% |
| !!! | TAATCAATTTTTAACACAGT+TGG | + | chr2_3:6774483-6774502 | None:intergenic | 20.0% |
| !!! | CATCAATGCTATTTTATATT+TGG | + | chr2_3:6774745-6774764 | None:intergenic | 20.0% |
| !! | ATAAACTATAAGGTTATGTT+TGG | + | chr2_3:6774799-6774818 | None:intergenic | 20.0% |
| !!! | AAAGTATTTATGAAGATGAT+TGG | - | chr2_3:6775482-6775501 | Msa0274920:five_prime_UTR | 20.0% |
| !! | TAAAAGAGAAGAAAAATTGA+GGG | + | chr2_3:6775653-6775672 | None:intergenic | 20.0% |
| !! | TTAAAAGAGAAGAAAAATTG+AGG | + | chr2_3:6775654-6775673 | None:intergenic | 20.0% |
| !! | TTTCAAAATCAGTAACAAAT+TGG | - | chr2_3:6775761-6775780 | Msa0274920:five_prime_UTR | 20.0% |
| !!! | TTGCATTATTTTACCTTATG+GGG | + | chr2_3:6770857-6770876 | None:intergenic | 25.0% |
| !! | AGGTGAAATTTTTCATCTTT+TGG | - | chr2_3:6770954-6770973 | Msa0274920:intron | 25.0% |
| !! | TGAAATTTTTCATCTTTTGG+TGG | - | chr2_3:6770957-6770976 | Msa0274920:intron | 25.0% |
| ! | AAAACCTGTTTAACAGAAAT+GGG | + | chr2_3:6771299-6771318 | None:intergenic | 25.0% |
| !!! | TGATTTTGTAGCATTGATTT+TGG | - | chr2_3:6771429-6771448 | Msa0274920:intron | 25.0% |
| !! | TTGGATTTGGTTGTTTATAA+TGG | - | chr2_3:6771537-6771556 | Msa0274920:intron | 25.0% |
| !! | TGGATTTGGTTGTTTATAAT+GGG | - | chr2_3:6771538-6771557 | Msa0274920:intron | 25.0% |
| ! | ATGATTAATTGTTTGGATGA+GGG | - | chr2_3:6771614-6771633 | Msa0274920:intron | 25.0% |
| !!! | TACCTTGTTTCTTTGTTATT+TGG | - | chr2_3:6771656-6771675 | Msa0274920:intron | 25.0% |
| ! | TACCAAATAACAAAGAAACA+AGG | + | chr2_3:6771661-6771680 | None:intergenic | 25.0% |
| !!! | AGTGTGGAAAATTGTTATTT+TGG | - | chr2_3:6772042-6772061 | Msa0274920:CDS | 25.0% |
| !!! | TGGAAAATTGTTATTTTGGT+TGG | - | chr2_3:6772046-6772065 | Msa0274920:CDS | 25.0% |
| !! | AGCACAAAATATCTAGAATT+AGG | + | chr2_3:6772105-6772124 | None:intergenic | 25.0% |
| ! | TATGTTCTATATTATCTGAG+AGG | - | chr2_3:6772145-6772164 | Msa0274920:CDS | 25.0% |
| !! | GCTAGGATATAATTATGTTT+TGG | - | chr2_3:6772424-6772443 | Msa0274920:intron | 25.0% |
| !!! | AATTATGTTTTGGTTGAGTA+CGG | - | chr2_3:6772434-6772453 | Msa0274920:intron | 25.0% |
| ! | TAATTGAATGTAACATGTGT+CGG | + | chr2_3:6772519-6772538 | None:intergenic | 25.0% |
| ! | CCATATTCTCAAATTATTAC+CGG | - | chr2_3:6772541-6772560 | Msa0274920:intron | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | + | chr2_3:6772617-6772636 | None:intergenic | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | + | chr2_3:6772617-6772636 | None:intergenic | 25.0% |
| ! | CATATCAACAACAAAGAATA+TGG | + | chr2_3:6772653-6772672 | None:intergenic | 25.0% |
| !! | AATTTTCCTAACCAAAAAGT+AGG | - | chr2_3:6772674-6772693 | Msa0274920:intron | 25.0% |
| ! | ATGATGATTGAATATGACTA+TGG | - | chr2_3:6772803-6772822 | Msa0274920:intron | 25.0% |
| !! | TTTACCTAACATGTTTCTAT+TGG | - | chr2_3:6772918-6772937 | Msa0274920:intron | 25.0% |
| !! | TTTCTATTGGCGAATAATTT+TGG | - | chr2_3:6772931-6772950 | Msa0274920:intron | 25.0% |
| ! | GTGAGTATACAATTAATCTT+TGG | - | chr2_3:6773045-6773064 | Msa0274920:CDS | 25.0% |
| ! | TCATATGAATTAAATGTGCT+AGG | - | chr2_3:6773536-6773555 | Msa0274920:intron | 25.0% |
| ! | TGTCGAACAAAATAAAAGTA+TGG | + | chr2_3:6773851-6773870 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGATCGGAAAAA+AGG | + | chr2_3:6774097-6774116 | None:intergenic | 25.0% |
| !! | ATCATTGAGCAAATACATTT+TGG | - | chr2_3:6774534-6774553 | Msa0274920:intron | 25.0% |
| !!! | ATATTATTAATTTTCTGGGG+TGG | - | chr2_3:6774591-6774610 | Msa0274920:intron | 25.0% |
| ! | AGGGTTTGATATAAACTATA+AGG | + | chr2_3:6774809-6774828 | None:intergenic | 25.0% |
| ! | CCATTATAAATACCAGAAAA+GGG | + | chr2_3:6774828-6774847 | None:intergenic | 25.0% |
| ! | TAGAACATTATGACATTGTT+TGG | + | chr2_3:6774916-6774935 | None:intergenic | 25.0% |
| ! | AATCTTTCTTAATAGTTTGG+AGG | - | chr2_3:6774981-6775000 | Msa0274920:intron | 25.0% |
| ! | TTTACAATCAAAATATGCAG+CGG | + | chr2_3:6775154-6775173 | None:intergenic | 25.0% |
| ! | AATAAAGTAACTGAGATAAC+AGG | + | chr2_3:6775320-6775339 | None:intergenic | 25.0% |
| ! | GTTTATCTAATGAGAATGTT+TGG | - | chr2_3:6775371-6775390 | Msa0274920:five_prime_UTR | 25.0% |
| ! | AAATATGTTTGAATGTCACT+TGG | - | chr2_3:6775440-6775459 | Msa0274920:five_prime_UTR | 25.0% |
| ! | CTTCATAAATACTTTCTCAT+TGG | + | chr2_3:6775477-6775496 | None:intergenic | 25.0% |
| ! | TATTTATGAAGATGATTGGA+TGG | - | chr2_3:6775486-6775505 | Msa0274920:five_prime_UTR | 25.0% |
| ! | TACTCGCAATAACATAATAA+CGG | - | chr2_3:6775723-6775742 | Msa0274920:five_prime_UTR | 25.0% |
| ATTTGTCTGAGAAAGGAAAA+GGG | + | chr2_3:6770746-6770765 | None:intergenic | 30.0% | |
| ! | TTTGATGATTTGTCTGAGAA+AGG | + | chr2_3:6770753-6770772 | None:intergenic | 30.0% |
| GAAGATTGTGATGAAAAAAG+GGG | + | chr2_3:6770800-6770819 | None:intergenic | 30.0% | |
| GGAAGATTGTGATGAAAAAA+GGG | + | chr2_3:6770801-6770820 | None:intergenic | 30.0% | |
| ! | AATTTTTCTCATTCCCCATA+AGG | - | chr2_3:6770841-6770860 | Msa0274920:three_prime_UTR | 30.0% |
| ! | TTCTCTCTCTTCTCTTTTAA+AGG | - | chr2_3:6770934-6770953 | Msa0274920:intron | 30.0% |
| AAACCTGTTTAACAGAAATG+GGG | + | chr2_3:6771298-6771317 | None:intergenic | 30.0% | |
| GAAAACCTGTTTAACAGAAA+TGG | + | chr2_3:6771300-6771319 | None:intergenic | 30.0% | |
| AAAGCGATAGAAAATGAGAA+TGG | + | chr2_3:6771330-6771349 | None:intergenic | 30.0% | |
| ATTTATGTTTGGATGCTTTG+AGG | - | chr2_3:6771463-6771482 | Msa0274920:intron | 30.0% | |
| !! | AGATTTTGTTTGATGCATTG+AGG | - | chr2_3:6771562-6771581 | Msa0274920:intron | 30.0% |
| TTTGATGCATTGAGGTTAAT+TGG | - | chr2_3:6771570-6771589 | Msa0274920:intron | 30.0% | |
| TTGATGCATTGAGGTTAATT+GGG | - | chr2_3:6771571-6771590 | Msa0274920:intron | 30.0% | |
| CATGATTAATTGTTTGGATG+AGG | - | chr2_3:6771613-6771632 | Msa0274920:intron | 30.0% | |
| GTAAATGTAAACATACACAG+AGG | + | chr2_3:6771947-6771966 | None:intergenic | 30.0% | |
| GTATGTTTACATTTACCCAT+TGG | - | chr2_3:6771951-6771970 | Msa0274920:CDS | 30.0% | |
| ! | TGGTTGGTCAATGTTATTAA+TGG | - | chr2_3:6772062-6772081 | Msa0274920:CDS | 30.0% |
| !! | TAATGGATAATGTAGGGTTT+TGG | - | chr2_3:6772079-6772098 | Msa0274920:CDS | 30.0% |
| TTCTATATTATCTGAGAGGT+TGG | - | chr2_3:6772149-6772168 | Msa0274920:CDS | 30.0% | |
| TCTATATTATCTGAGAGGTT+GGG | - | chr2_3:6772150-6772169 | Msa0274920:CDS | 30.0% | |
| TCAACTTGTGAAACTTTACA+TGG | - | chr2_3:6772199-6772218 | Msa0274920:CDS | 30.0% | |
| CAACTTGTGAAACTTTACAT+GGG | - | chr2_3:6772200-6772219 | Msa0274920:CDS | 30.0% | |
| ! | GGTCATTTCAATGTCTTTTA+AGG | + | chr2_3:6772243-6772262 | None:intergenic | 30.0% |
| TAAAAGACATTGAAATGACC+AGG | - | chr2_3:6772243-6772262 | Msa0274920:CDS | 30.0% | |
| TAATAACCAGAAACAAAACC+TGG | + | chr2_3:6772264-6772283 | None:intergenic | 30.0% | |
| !!! | ATTATGTTTTGGTTGAGTAC+GGG | - | chr2_3:6772435-6772454 | Msa0274920:intron | 30.0% |
| CCGGTAATAATTTGAGAATA+TGG | + | chr2_3:6772544-6772563 | None:intergenic | 30.0% | |
| GAATATGGAAAACACAAACA+CGG | + | chr2_3:6772602-6772621 | None:intergenic | 30.0% | |
| TATACTATTCAACACCAAAG+AGG | + | chr2_3:6772743-6772762 | None:intergenic | 30.0% | |
| !! | TTGGTGTTGAATAGTATACA+TGG | - | chr2_3:6772745-6772764 | Msa0274920:intron | 30.0% |
| GATTGAATATGACTATGTTG+TGG | - | chr2_3:6772808-6772827 | Msa0274920:intron | 30.0% | |
| AATATGACTATGTTGTGGAA+GGG | - | chr2_3:6772813-6772832 | Msa0274920:intron | 30.0% | |
| !! | TACATTGTTTTACAGCACTA+TGG | - | chr2_3:6772893-6772912 | Msa0274920:CDS | 30.0% |
| AATAATATGTTTGAGTGGAC+CGG | + | chr2_3:6773004-6773023 | None:intergenic | 30.0% | |
| TGAAGGTTTAGATCTCAAAA+AGG | + | chr2_3:6773109-6773128 | None:intergenic | 30.0% | |
| ! | TGAGATCTAAACCTTCATTT+TGG | - | chr2_3:6773112-6773131 | Msa0274920:CDS | 30.0% |
| ATGATATAATCTGTGCATGT+AGG | + | chr2_3:6773208-6773227 | None:intergenic | 30.0% | |
| !!! | ATTTTTGCTGTTTATCAGTG+TGG | - | chr2_3:6773329-6773348 | Msa0274920:CDS | 30.0% |
| TCCTTAAGATCAAATTTCCT+TGG | - | chr2_3:6773377-6773396 | Msa0274920:intron | 30.0% | |
| TCCAAGGAAATTTGATCTTA+AGG | + | chr2_3:6773381-6773400 | None:intergenic | 30.0% | |
| ACAAAGTTCACTATCTATGA+CGG | - | chr2_3:6773401-6773420 | Msa0274920:intron | 30.0% | |
| TTACTAAAAGTCGTTCTACT+AGG | - | chr2_3:6773450-6773469 | Msa0274920:intron | 30.0% | |
| !! | CTTACTTTTATCACAACGAT+CGG | - | chr2_3:6773687-6773706 | Msa0274920:intron | 30.0% |
| ACTATCTATATATTGCAAGC+AGG | - | chr2_3:6773951-6773970 | Msa0274920:intron | 30.0% | |
| CTATCTATATATTGCAAGCA+GGG | - | chr2_3:6773952-6773971 | Msa0274920:intron | 30.0% | |
| TATCTATATATTGCAAGCAG+GGG | - | chr2_3:6773953-6773972 | Msa0274920:intron | 30.0% | |
| TATGCTTGTGTTGAAAAACA+AGG | - | chr2_3:6774171-6774190 | Msa0274920:intron | 30.0% | |
| !! | TGTTGGTGCTTAAATTTTCA+TGG | - | chr2_3:6774220-6774239 | Msa0274920:intron | 30.0% |
| GACAAGATTATTCTGCAATT+TGG | - | chr2_3:6774319-6774338 | Msa0274920:intron | 30.0% | |
| ATTCTGCAATTTGGAAAAGT+TGG | - | chr2_3:6774328-6774347 | Msa0274920:intron | 30.0% | |
| TTCTGCAATTTGGAAAAGTT+GGG | - | chr2_3:6774329-6774348 | Msa0274920:intron | 30.0% | |
| ! | GAATAAGAGCATGTTTAAAC+AGG | - | chr2_3:6774445-6774464 | Msa0274920:intron | 30.0% |
| !!! | TGAGCAAATACATTTTGGTT+TGG | - | chr2_3:6774539-6774558 | Msa0274920:intron | 30.0% |
| GCATAAGATTACAAAAAGAG+AGG | + | chr2_3:6774689-6774708 | None:intergenic | 30.0% | |
| TTTGGTAGACAGACTAAAAT+AGG | + | chr2_3:6774781-6774800 | None:intergenic | 30.0% | |
| ! | GTTTATATCAAACCCTTTTC+TGG | - | chr2_3:6774813-6774832 | Msa0274920:intron | 30.0% |
| !! | CCCTTTTCTGGTATTTATAA+TGG | - | chr2_3:6774825-6774844 | Msa0274920:intron | 30.0% |
| GCCATTATAAATACCAGAAA+AGG | + | chr2_3:6774829-6774848 | None:intergenic | 30.0% | |
| AGATTTAAAGGTCAACTGTT+TGG | + | chr2_3:6774966-6774985 | None:intergenic | 30.0% | |
| TAACTCAGAAACTTAGGATT+TGG | - | chr2_3:6775055-6775074 | Msa0274920:CDS | 30.0% | |
| AGATAACAGGTACAATCTTA+TGG | + | chr2_3:6775307-6775326 | None:intergenic | 30.0% | |
| !! | TTTGGTTCAATTTTAATGCC+AGG | - | chr2_3:6775389-6775408 | Msa0274920:five_prime_UTR | 30.0% |
| GTTCTACTGAATCCATAATA+AGG | - | chr2_3:6775510-6775529 | Msa0274920:five_prime_UTR | 30.0% | |
| GGAATAATTTACACGAATGA+AGG | + | chr2_3:6775604-6775623 | None:intergenic | 30.0% | |
| AGAATTTATGTACAGCACAA+GGG | + | chr2_3:6775626-6775645 | None:intergenic | 30.0% | |
| AAGAATTTATGTACAGCACA+AGG | + | chr2_3:6775627-6775646 | None:intergenic | 30.0% | |
| AGTTAAAGGTAGGTACATGA+TGG | + | chr2_3:6770596-6770615 | None:intergenic | 35.0% | |
| AGAGACAAGAAGTTAAAGGT+AGG | + | chr2_3:6770606-6770625 | None:intergenic | 35.0% | |
| TGGAAGAGACAAGAAGTTAA+AGG | + | chr2_3:6770610-6770629 | None:intergenic | 35.0% | |
| ACACATGAGATAAGAAGAGT+TGG | + | chr2_3:6770630-6770649 | None:intergenic | 35.0% | |
| TATGATTGTGTGTGAAGAAG+AGG | + | chr2_3:6770700-6770719 | None:intergenic | 35.0% | |
| GATTTGTCTGAGAAAGGAAA+AGG | + | chr2_3:6770747-6770766 | None:intergenic | 35.0% | |
| GGGAAGATTGTGATGAAAAA+AGG | + | chr2_3:6770802-6770821 | None:intergenic | 35.0% | |
| !! | AAAAGTGTTGCGTTGATTGA+GGG | + | chr2_3:6770901-6770920 | None:intergenic | 35.0% |
| !! | TAAAAGTGTTGCGTTGATTG+AGG | + | chr2_3:6770902-6770921 | None:intergenic | 35.0% |
| TCATGTCTTCGATTATGTTG+CGG | + | chr2_3:6771022-6771041 | None:intergenic | 35.0% | |
| GTGATCATAGCTGAAATTTC+AGG | + | chr2_3:6771272-6771291 | None:intergenic | 35.0% | |
| TTTCCCCATTTCTGTTAAAC+AGG | - | chr2_3:6771292-6771311 | Msa0274920:intron | 35.0% | |
| TTTCTATCGCTTTCCTCATA+TGG | - | chr2_3:6771337-6771356 | Msa0274920:intron | 35.0% | |
| TTCTATCGCTTTCCTCATAT+GGG | - | chr2_3:6771338-6771357 | Msa0274920:intron | 35.0% | |
| !! | TTTTGACTACAACCCATATG+AGG | + | chr2_3:6771353-6771372 | None:intergenic | 35.0% |
| TGTAAAGGACCAAAATGTGT+TGG | - | chr2_3:6771518-6771537 | Msa0274920:intron | 35.0% | |
| ! | CAACCAAATCCAACACATTT+TGG | + | chr2_3:6771530-6771549 | None:intergenic | 35.0% |
| CATAACTTTCGCAACTACAA+TGG | + | chr2_3:6771821-6771840 | None:intergenic | 35.0% | |
| ! | AAACGTTCTTTTTCTCAGTG+TGG | - | chr2_3:6772026-6772045 | Msa0274920:CDS | 35.0% |
| !!! | AAATGACCAGGTTTTGTTTC+TGG | - | chr2_3:6772255-6772274 | Msa0274920:CDS | 35.0% |
| TCAAATACTCCTCTTACTAC+AGG | - | chr2_3:6772320-6772339 | Msa0274920:intron | 35.0% | |
| ! | TGAGATATCATCTACTGGTT+TGG | - | chr2_3:6772402-6772421 | Msa0274920:intron | 35.0% |
| ACACTGACACTTCATATTGA+AGG | - | chr2_3:6772464-6772483 | Msa0274920:intron | 35.0% | |
| CACAAACAAGGGAATCTTAA+GGG | + | chr2_3:6772776-6772795 | None:intergenic | 35.0% | |
| GAATATGACTATGTTGTGGA+AGG | - | chr2_3:6772812-6772831 | Msa0274920:intron | 35.0% | |
| TTCGCCAATAGAAACATGTT+AGG | + | chr2_3:6772925-6772944 | None:intergenic | 35.0% | |
| !! | TGCGCTTTATAAAGCATTGA+AGG | + | chr2_3:6772980-6772999 | None:intergenic | 35.0% |
| AATGCTTTATAAAGCGCAAC+CGG | - | chr2_3:6772982-6773001 | Msa0274920:intron | 35.0% | |
| AGAAGCAATGACCAAAATGA+AGG | + | chr2_3:6773126-6773145 | None:intergenic | 35.0% | |
| ACAACTATGTTGGGAAATTG+AGG | - | chr2_3:6773263-6773282 | Msa0274920:intron | 35.0% | |
| AGATAGTGAACTTTGTTCCA+AGG | + | chr2_3:6773397-6773416 | None:intergenic | 35.0% | |
| TAAAAGTCGTTCTACTAGGT+TGG | - | chr2_3:6773454-6773473 | Msa0274920:intron | 35.0% | |
| AATTAAATGTGCTAGGCTCT+AGG | - | chr2_3:6773543-6773562 | Msa0274920:intron | 35.0% | |
| CGATCGTTGTGATAAAAGTA+AGG | + | chr2_3:6773689-6773708 | None:intergenic | 35.0% | |
| CGGTAAGCTAAATAGTTTAC+GGG | + | chr2_3:6773899-6773918 | None:intergenic | 35.0% | |
| GCGGTAAGCTAAATAGTTTA+CGG | + | chr2_3:6773900-6773919 | None:intergenic | 35.0% | |
| ATCTATATATTGCAAGCAGG+GGG | - | chr2_3:6773954-6773973 | Msa0274920:intron | 35.0% | |
| AGAGAAAACTCAGTTTGTGT+AGG | + | chr2_3:6774046-6774065 | None:intergenic | 35.0% | |
| GATCGGAAAAAAGGAAACAA+GGG | + | chr2_3:6774088-6774107 | None:intergenic | 35.0% | |
| TGATCGGAAAAAAGGAAACA+AGG | + | chr2_3:6774089-6774108 | None:intergenic | 35.0% | |
| !! | CCACACGATTTGATTTTGAT+CGG | + | chr2_3:6774105-6774124 | None:intergenic | 35.0% |
| ! | GGTGCTTAAATTTTCATGGA+CGG | - | chr2_3:6774224-6774243 | Msa0274920:intron | 35.0% |
| ! | GTGCTTAAATTTTCATGGAC+GGG | - | chr2_3:6774225-6774244 | Msa0274920:intron | 35.0% |
| AGAATAATCTTGTCGTGTTC+CGG | + | chr2_3:6774313-6774332 | None:intergenic | 35.0% | |
| ! | TGGGAAGGATTTGTTTACAA+TGG | - | chr2_3:6774348-6774367 | Msa0274920:intron | 35.0% |
| CTCTTATTCACAAGCAATCT+TGG | + | chr2_3:6774434-6774453 | None:intergenic | 35.0% | |
| !! | TGGTAGCTTTAAGTAGTGTT+TGG | - | chr2_3:6774611-6774630 | Msa0274920:intron | 35.0% |
| GGATAAGGCTTAATTGTTGT+TGG | + | chr2_3:6774868-6774887 | None:intergenic | 35.0% | |
| ! | ACAATTAAGCCTTATCCCAT+TGG | - | chr2_3:6774871-6774890 | Msa0274920:intron | 35.0% |
| ! | CAATTAAGCCTTATCCCATT+GGG | - | chr2_3:6774872-6774891 | Msa0274920:intron | 35.0% |
| TCAAAATATGCAGCGGTATT+GGG | + | chr2_3:6775147-6775166 | None:intergenic | 35.0% | |
| ATCAAAATATGCAGCGGTAT+TGG | + | chr2_3:6775148-6775167 | None:intergenic | 35.0% | |
| GAAATTCCGATCGTGAAATT+TGG | - | chr2_3:6775180-6775199 | Msa0274920:CDS | 35.0% | |
| GACAATCCAAATTTCACGAT+CGG | + | chr2_3:6775189-6775208 | None:intergenic | 35.0% | |
| AACAGGTACAATCTTATGGA+TGG | + | chr2_3:6775303-6775322 | None:intergenic | 35.0% | |
| TCTCAGATTGTGATCTAATC+TGG | + | chr2_3:6775421-6775440 | None:intergenic | 35.0% | |
| ! | TATGTTTGAATGTCACTTGG+TGG | - | chr2_3:6775443-6775462 | Msa0274920:five_prime_UTR | 35.0% |
| ! | ATGTTTGAATGTCACTTGGT+GGG | - | chr2_3:6775444-6775463 | Msa0274920:five_prime_UTR | 35.0% |
| GAATTTATGTACAGCACAAG+GGG | + | chr2_3:6775625-6775644 | None:intergenic | 35.0% | |
| AGCACATAGGATCTCAAAGT+GGG | + | chr2_3:6770547-6770566 | None:intergenic | 40.0% | |
| ! | GATGGTTGGTTGTTTCAAGA+TGG | + | chr2_3:6770578-6770597 | None:intergenic | 40.0% |
| AAAGGTAGGTACATGATGGT+TGG | + | chr2_3:6770592-6770611 | None:intergenic | 40.0% | |
| !! | AAAGTGTTGCGTTGATTGAG+GGG | + | chr2_3:6770900-6770919 | None:intergenic | 40.0% |
| CAGATCGCCAATTTCGATTT+CGG | + | chr2_3:6770985-6771004 | None:intergenic | 40.0% | |
| GAAATCGAAATTGGCGATCT+GGG | - | chr2_3:6770984-6771003 | Msa0274920:intron | 40.0% | |
| ATCAAGATCGCAAAGAGTAG+TGG | - | chr2_3:6771043-6771062 | Msa0274920:intron | 40.0% | |
| TGAAGTTCTTCTCCGAATTG+AGG | - | chr2_3:6771151-6771170 | Msa0274920:intron | 40.0% | |
| GGACCAAAATGTGTTGGATT+TGG | - | chr2_3:6771524-6771543 | Msa0274920:intron | 40.0% | |
| !! | CAACTACAATGGCATCGATA+AGG | + | chr2_3:6771810-6771829 | None:intergenic | 40.0% |
| GTAAACATACACAGAGGAAC+AGG | + | chr2_3:6771941-6771960 | None:intergenic | 40.0% | |
| TCTGCGTGTGATTCTCTATT+AGG | - | chr2_3:6772373-6772392 | Msa0274920:intron | 40.0% | |
| GTGTGATTCTCTATTAGGCT+TGG | - | chr2_3:6772378-6772397 | Msa0274920:intron | 40.0% | |
| TTGGCTGAGATATCATCTAC+TGG | - | chr2_3:6772397-6772416 | Msa0274920:intron | 40.0% | |
| !! | TATCATCTACTGGTTTGGCT+AGG | - | chr2_3:6772407-6772426 | Msa0274920:intron | 40.0% |
| TCCTAACCAAAAAGTAGGAG+AGG | - | chr2_3:6772679-6772698 | Msa0274920:intron | 40.0% | |
| !!! | ACCTCTCCTACTTTTTGGTT+AGG | + | chr2_3:6772683-6772702 | None:intergenic | 40.0% |
| !! | ACTGTTTTGGGCTAATTGAG+TGG | - | chr2_3:6772704-6772723 | Msa0274920:intron | 40.0% |
| !! | CTGTTTTGGGCTAATTGAGT+GGG | - | chr2_3:6772705-6772724 | Msa0274920:intron | 40.0% |
| !! | AACACCAAAGAGGCATCTTA+TGG | + | chr2_3:6772733-6772752 | None:intergenic | 40.0% |
| CCACAAACAAGGGAATCTTA+AGG | + | chr2_3:6772777-6772796 | None:intergenic | 40.0% | |
| ! | CCTTAAGATTCCCTTGTTTG+TGG | - | chr2_3:6772774-6772793 | Msa0274920:intron | 40.0% |
| ! | AAGATTCCCTTGTTTGTGGA+AGG | - | chr2_3:6772778-6772797 | Msa0274920:intron | 40.0% |
| ! | AGATTCCCTTGTTTGTGGAA+GGG | - | chr2_3:6772779-6772798 | Msa0274920:intron | 40.0% |
| TGCTTCTTTAATTCAGCGCT+AGG | - | chr2_3:6773139-6773158 | Msa0274920:intron | 40.0% | |
| ! | GTAAATTTTGCTCCTGCATG+AGG | + | chr2_3:6773434-6773453 | None:intergenic | 40.0% |
| !! | TAGGTTGGTGAATCTAAAGC+AGG | - | chr2_3:6773469-6773488 | Msa0274920:intron | 40.0% |
| GGTAAAGTCACACAGATGAT+GGG | - | chr2_3:6773708-6773727 | Msa0274920:intron | 40.0% | |
| ATAGTTTACGGGTAACGCTT+TGG | + | chr2_3:6773888-6773907 | None:intergenic | 40.0% | |
| TTCGATTGAAGAGGATGGAA+TGG | + | chr2_3:6774008-6774027 | None:intergenic | 40.0% | |
| CCGATCAAAATCAAATCGTG+TGG | - | chr2_3:6774102-6774121 | Msa0274920:intron | 40.0% | |
| ! | TCTCTTTTATCGCCAACAAG+AGG | + | chr2_3:6774148-6774167 | None:intergenic | 40.0% |
| CTTGTTGGCGATAAAAGAGA+TGG | - | chr2_3:6774148-6774167 | Msa0274920:intron | 40.0% | |
| ! | CAGCTGAAAGTTTTTAACCG+AGG | + | chr2_3:6774260-6774279 | None:intergenic | 40.0% |
| CTCGGTTAAAAACTTTCAGC+TGG | - | chr2_3:6774258-6774277 | Msa0274920:intron | 40.0% | |
| GGTTAAAAACTTTCAGCTGG+TGG | - | chr2_3:6774261-6774280 | Msa0274920:intron | 40.0% | |
| GCAATTTGGAAAAGTTGGGA+AGG | - | chr2_3:6774333-6774352 | Msa0274920:intron | 40.0% | |
| GGATTTCCGATACCCTATTT+CGG | - | chr2_3:6774369-6774388 | Msa0274920:intron | 40.0% | |
| GAAATGCCGAAATAGGGTAT+CGG | + | chr2_3:6774378-6774397 | None:intergenic | 40.0% | |
| ATACCCTATTTCGGCATTTC+AGG | - | chr2_3:6774378-6774397 | Msa0274920:intron | 40.0% | |
| ATGCCTGAAATGCCGAAATA+GGG | + | chr2_3:6774384-6774403 | None:intergenic | 40.0% | |
| AATGCCTGAAATGCCGAAAT+AGG | + | chr2_3:6774385-6774404 | None:intergenic | 40.0% | |
| ! | TGGCAAATTGTGTCACTATG+TGG | - | chr2_3:6774559-6774578 | Msa0274920:intron | 40.0% |
| ! | ATTGTGTCACTATGTGGCAA+TGG | - | chr2_3:6774565-6774584 | Msa0274920:intron | 40.0% |
| GGAGGATAACTCAGAAACTT+AGG | - | chr2_3:6775049-6775068 | Msa0274920:CDS | 40.0% | |
| ACCATCTGATCTCGATCTAA+TGG | + | chr2_3:6775124-6775143 | None:intergenic | 40.0% | |
| GATCTAATCTGGATTGAACC+TGG | + | chr2_3:6775410-6775429 | None:intergenic | 40.0% | |
| !! | ACGAGTTTTCAGCTAGTTTC+TGG | - | chr2_3:6775541-6775560 | Msa0274920:five_prime_UTR | 40.0% |
| GAGCACATAGGATCTCAAAG+TGG | + | chr2_3:6770548-6770567 | None:intergenic | 45.0% | |
| ! | TGGTTGTTTCAAGATGGTGG+AGG | + | chr2_3:6770572-6770591 | None:intergenic | 45.0% |
| ! | GGTTGGTTGTTTCAAGATGG+TGG | + | chr2_3:6770575-6770594 | None:intergenic | 45.0% |
| TTGTTGAGAGAGAGAGAGAG+AGG | + | chr2_3:6770666-6770685 | None:intergenic | 45.0% | |
| GATTGTGTGTGAAGAAGAGG+TGG | + | chr2_3:6770697-6770716 | None:intergenic | 45.0% | |
| GAGAAAGGAAAAGGGTGAGA+AGG | + | chr2_3:6770738-6770757 | None:intergenic | 45.0% | |
| GGTGGAACCGAAATCGAAAT+TGG | - | chr2_3:6770975-6770994 | Msa0274920:intron | 45.0% | |
| CGAAATCGAAATTGGCGATC+TGG | - | chr2_3:6770983-6771002 | Msa0274920:intron | 45.0% | |
| AAGATCGCAAAGAGTAGTGG+TGG | - | chr2_3:6771046-6771065 | Msa0274920:intron | 45.0% | |
| ACAGTTTACGGCAGAGTTGT+TGG | - | chr2_3:6771102-6771121 | Msa0274920:intron | 45.0% | |
| CAGTTTACGGCAGAGTTGTT+GGG | - | chr2_3:6771103-6771122 | Msa0274920:intron | 45.0% | |
| ! | ACCTAACCAACGTTTAGCTC+CGG | - | chr2_3:6772349-6772368 | Msa0274920:intron | 45.0% |
| ! | CTTCATATTGAAGGTGTGCC+CGG | - | chr2_3:6772473-6772492 | Msa0274920:intron | 45.0% |
| !! | TGTCGGTGTCATGTTGTTGT+CGG | + | chr2_3:6772502-6772521 | None:intergenic | 45.0% |
| !! | CAGTGACCTCTCCTACTTTT+TGG | + | chr2_3:6772688-6772707 | None:intergenic | 45.0% |
| ! | AGTAGGAGAGGTCACTGTTT+TGG | - | chr2_3:6772691-6772710 | Msa0274920:intron | 45.0% |
| ! | GTAGGAGAGGTCACTGTTTT+GGG | - | chr2_3:6772692-6772711 | Msa0274920:intron | 45.0% |
| TCATGCCCTTCCACAAACAA+GGG | + | chr2_3:6772787-6772806 | None:intergenic | 45.0% | |
| ATCATGCCCTTCCACAAACA+AGG | + | chr2_3:6772788-6772807 | None:intergenic | 45.0% | |
| CATTGAAGGAGATTCTCCCT+TGG | + | chr2_3:6772966-6772985 | None:intergenic | 45.0% | |
| AATTCAGCGCTAGGTGATGA+CGG | - | chr2_3:6773148-6773167 | Msa0274920:intron | 45.0% | |
| TAGACGCAGATGATATGTCC+AGG | - | chr2_3:6773233-6773252 | Msa0274920:intron | 45.0% | |
| AGACGCAGATGATATGTCCA+GGG | - | chr2_3:6773234-6773253 | Msa0274920:intron | 45.0% | |
| ! | AACATAGTTGTTGCTTCCCC+TGG | + | chr2_3:6773254-6773273 | None:intergenic | 45.0% |
| AGGGGAAGCAACAACTATGT+TGG | - | chr2_3:6773253-6773272 | Msa0274920:intron | 45.0% | |
| GGGGAAGCAACAACTATGTT+GGG | - | chr2_3:6773254-6773273 | Msa0274920:intron | 45.0% | |
| ! | AATTTTGCTCCTGCATGAGG+TGG | + | chr2_3:6773431-6773450 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGGTTTCACCCA+AGG | - | chr2_3:6773481-6773500 | Msa0274920:intron | 45.0% |
| TCATATGAGATGTGAGCCAC+TGG | + | chr2_3:6773524-6773543 | None:intergenic | 45.0% | |
| CGGTAAAGTCACACAGATGA+TGG | - | chr2_3:6773707-6773726 | Msa0274920:intron | 45.0% | |
| ACCGCGCACTCTTCATATAT+TGG | - | chr2_3:6773915-6773934 | Msa0274920:intron | 45.0% | |
| ! | GCCAATATATGAAGAGTGCG+CGG | + | chr2_3:6773919-6773938 | None:intergenic | 45.0% |
| ATGACACAGTGCATTCTCCT+TGG | + | chr2_3:6773980-6773999 | None:intergenic | 45.0% | |
| AAGGAGAATGCACTGTGTCA+TGG | - | chr2_3:6773979-6773998 | Msa0274920:intron | 45.0% | |
| GTGGTAGAGAACTCTCTATC+CGG | - | chr2_3:6774121-6774140 | Msa0274920:intron | 45.0% | |
| TTTATCGCCAACAAGAGGTC+CGG | + | chr2_3:6774143-6774162 | None:intergenic | 45.0% | |
| TGTTGAAAAACAAGGCTCCG+AGG | - | chr2_3:6774179-6774198 | Msa0274920:intron | 45.0% | |
| TCTGCAGAAAATGGAACAGC+TGG | - | chr2_3:6774286-6774305 | Msa0274920:intron | 45.0% | |
| AGAAAATGGAACAGCTGGAC+CGG | - | chr2_3:6774291-6774310 | Msa0274920:intron | 45.0% | |
| TCTTGGTATCAAAGCTGCTG+AGG | + | chr2_3:6774417-6774436 | None:intergenic | 45.0% | |
| ! | TAAGCCTTATCCCATTGGGT+AGG | - | chr2_3:6774876-6774895 | Msa0274920:intron | 45.0% |
| ! | AAGCCTTATCCCATTGGGTA+GGG | - | chr2_3:6774877-6774896 | Msa0274920:intron | 45.0% |
| ACGGGCAGCAAACGAATAAT+AGG | + | chr2_3:6775015-6775034 | None:intergenic | 45.0% | |
| GCCATTAGATCGAGATCAGA+TGG | - | chr2_3:6775120-6775139 | Msa0274920:CDS | 45.0% | |
| CATTCACGCAATCAGCATGT+CGG | + | chr2_3:6775232-6775251 | None:intergenic | 45.0% | |
| ! | ATGCTGATTGCGTGAATGTG+TGG | - | chr2_3:6775234-6775253 | Msa0274920:CDS | 45.0% |
| TCGTGTGCAGCACCTTATTA+TGG | + | chr2_3:6775525-6775544 | None:intergenic | 45.0% | |
| CGAAATTGGCGATCTGGGTA+TGG | - | chr2_3:6770989-6771008 | Msa0274920:intron | 50.0% | |
| ATCGCAAAGAGTAGTGGTGG+TGG | - | chr2_3:6771049-6771068 | Msa0274920:intron | 50.0% | |
| GGAGAAGGAAGAGAAAGTGG+CGG | - | chr2_3:6771073-6771092 | Msa0274920:intron | 50.0% | |
| AAGGAAGAGAAAGTGGCGGT+TGG | - | chr2_3:6771077-6771096 | Msa0274920:intron | 50.0% | |
| ACTTCACGCAGAAGCTCTTG+TGG | + | chr2_3:6771137-6771156 | None:intergenic | 50.0% | |
| TCTTCTCCGAATTGAGGCCT+CGG | - | chr2_3:6771157-6771176 | Msa0274920:intron | 50.0% | |
| CACGCAACAACGTTCTTCCT+CGG | + | chr2_3:6771197-6771216 | None:intergenic | 50.0% | |
| AAGAACGTTGTTGCGTGTGC+TGG | - | chr2_3:6771200-6771219 | Msa0274920:intron | 50.0% | |
| GGTAAGCGTCCTGTAGTAAG+AGG | + | chr2_3:6772332-6772351 | None:intergenic | 50.0% | |
| TAGAGAATCACACGCAGAGC+CGG | + | chr2_3:6772371-6772390 | None:intergenic | 50.0% | |
| TCATGTTGTTGTCGGACACC+GGG | + | chr2_3:6772494-6772513 | None:intergenic | 50.0% | |
| GTCATGTTGTTGTCGGACAC+CGG | + | chr2_3:6772495-6772514 | None:intergenic | 50.0% | |
| GGCTCCATAAGATGCCTCTT+TGG | - | chr2_3:6772726-6772745 | Msa0274920:intron | 50.0% | |
| !! | GGCGAATAATTTTGGCAGCC+TGG | - | chr2_3:6772939-6772958 | Msa0274920:intron | 50.0% |
| !! | AATTTTGGCAGCCTGGTCCA+AGG | - | chr2_3:6772946-6772965 | Msa0274920:intron | 50.0% |
| !! | ATTTTGGCAGCCTGGTCCAA+GGG | - | chr2_3:6772947-6772966 | Msa0274920:intron | 50.0% |
| ATTCAGCGCTAGGTGATGAC+GGG | - | chr2_3:6773149-6773168 | Msa0274920:intron | 50.0% | |
| !! | TGATGACGGGAAGTTCCTTC+TGG | - | chr2_3:6773162-6773181 | Msa0274920:intron | 50.0% |
| TACATTTGCGTGCAGCCAGA+AGG | + | chr2_3:6773180-6773199 | None:intergenic | 50.0% | |
| GACGCAGATGATATGTCCAG+GGG | - | chr2_3:6773235-6773254 | Msa0274920:intron | 50.0% | |
| TAGTTGCCTGTTGGGACCTT+GGG | + | chr2_3:6773500-6773519 | None:intergenic | 50.0% | |
| ATAGTTGCCTGTTGGGACCT+TGG | + | chr2_3:6773501-6773520 | None:intergenic | 50.0% | |
| CCACTGGATAGTTGCCTGTT+GGG | + | chr2_3:6773508-6773527 | None:intergenic | 50.0% | |
| ! | CCTGGTTCGATTGAAGAGGA+TGG | + | chr2_3:6774013-6774032 | None:intergenic | 50.0% |
| CCATCCTCTTCAATCGAACC+AGG | - | chr2_3:6774010-6774029 | Msa0274920:intron | 50.0% | |
| TCCTCTTCAATCGAACCAGG+TGG | - | chr2_3:6774013-6774032 | Msa0274920:intron | 50.0% | |
| TCTCTATCCGGACCTCTTGT+TGG | - | chr2_3:6774133-6774152 | Msa0274920:intron | 50.0% | |
| TGAAAAACAAGGCTCCGAGG+TGG | - | chr2_3:6774182-6774201 | Msa0274920:intron | 50.0% | |
| CTGGTGGCTTCTGCAGAAAA+TGG | - | chr2_3:6774277-6774296 | Msa0274920:intron | 50.0% | |
| AGACCCTACCCAATGGGATA+AGG | + | chr2_3:6774883-6774902 | None:intergenic | 50.0% | |
| TGTAGCAGACCCTACCCAAT+GGG | + | chr2_3:6774889-6774908 | None:intergenic | 50.0% | |
| ATGTAGCAGACCCTACCCAA+TGG | + | chr2_3:6774890-6774909 | None:intergenic | 50.0% | |
| ! | TTATTCGTTTGCTGCCCGTG+AGG | - | chr2_3:6775016-6775035 | Msa0274920:CDS | 50.0% |
| TGCCCGTGAGGATAAACAGT+GGG | - | chr2_3:6775028-6775047 | Msa0274920:CDS | 50.0% | |
| CTCCCACTGTTTATCCTCAC+GGG | + | chr2_3:6775033-6775052 | None:intergenic | 50.0% | |
| CCTCCCACTGTTTATCCTCA+CGG | + | chr2_3:6775034-6775053 | None:intergenic | 50.0% | |
| ATTCCATGCAGTCAGCACGT+TGG | - | chr2_3:6775095-6775114 | Msa0274920:CDS | 50.0% | |
| !! | GATGGTGGAGGAGAGCACAT+AGG | + | chr2_3:6770560-6770579 | None:intergenic | 55.0% |
| !! | GCAAAGAGTAGTGGTGGTGG+CGG | - | chr2_3:6771052-6771071 | Msa0274920:intron | 55.0% |
| GGCGGAGAAGGAAGAGAAAG+TGG | - | chr2_3:6771070-6771089 | Msa0274920:intron | 55.0% | |
| TGGCGGTTGGCGACAGTTTA+CGG | - | chr2_3:6771090-6771109 | Msa0274920:intron | 55.0% | |
| TGTCCTCCGAGGCCTCAATT+CGG | + | chr2_3:6771166-6771185 | None:intergenic | 55.0% | |
| GCAACAACGTTCTTCCTCGG+CGG | + | chr2_3:6771194-6771213 | None:intergenic | 55.0% | |
| TTGCGTGTGCTGGAGTGTGT+AGG | - | chr2_3:6771210-6771229 | Msa0274920:intron | 55.0% | |
| GTGCTGGAGTGTGTAGGAGT+TGG | - | chr2_3:6771216-6771235 | Msa0274920:intron | 55.0% | |
| ! | GCCGGAGCTAAACGTTGGTT+AGG | + | chr2_3:6772353-6772372 | None:intergenic | 55.0% |
| AGACACTAACACGTCGACGC+CGG | + | chr2_3:6772563-6772582 | None:intergenic | 55.0% | |
| AGGAGATTCTCCCTTGGACC+AGG | + | chr2_3:6772960-6772979 | None:intergenic | 55.0% | |
| GTTTCACCCAAGGTCCCAAC+AGG | - | chr2_3:6773491-6773510 | Msa0274920:intron | 55.0% | |
| CCCAACAGGCAACTATCCAG+TGG | - | chr2_3:6773505-6773524 | Msa0274920:intron | 55.0% | |
| GCCACTGGATAGTTGCCTGT+TGG | + | chr2_3:6773509-6773528 | None:intergenic | 55.0% | |
| ATATTGCAAGCAGGGGGCCA+AGG | - | chr2_3:6773960-6773979 | Msa0274920:intron | 55.0% | |
| ! | GCCACCTGGTTCGATTGAAG+AGG | + | chr2_3:6774017-6774036 | None:intergenic | 55.0% |
| TGGACGGGTGACAATTGCCT+CGG | - | chr2_3:6774240-6774259 | Msa0274920:intron | 55.0% | |
| CTGCCCGTGAGGATAAACAG+TGG | - | chr2_3:6775027-6775046 | Msa0274920:CDS | 55.0% | |
| CCGTGAGGATAAACAGTGGG+AGG | - | chr2_3:6775031-6775050 | Msa0274920:CDS | 55.0% | |
| ATCAGCATGTCGGTGGTCGT+TGG | + | chr2_3:6775222-6775241 | None:intergenic | 55.0% | |
| TCACGCAATCAGCATGTCGG+TGG | + | chr2_3:6775229-6775248 | None:intergenic | 55.0% | |
| !! | AGTAGTGGTGGTGGCGGAGA+AGG | - | chr2_3:6771058-6771077 | Msa0274920:intron | 60.0% |
| TCTCCGAATTGAGGCCTCGG+AGG | - | chr2_3:6771160-6771179 | Msa0274920:intron | 60.0% | |
| GCAGAGCCGGAGCTAAACGT+TGG | + | chr2_3:6772358-6772377 | None:intergenic | 60.0% | |
| TTGCTCCTGCATGAGGTGGC+TGG | + | chr2_3:6773427-6773446 | None:intergenic | 60.0% | |
| TGTGTAGGAGCTACGCCACC+TGG | + | chr2_3:6774031-6774050 | None:intergenic | 60.0% | |
| TGCAGCTGCTCATGCCACCT+CGG | + | chr2_3:6774199-6774218 | None:intergenic | 60.0% | |
| GGCATGAGCAGCTGCAGTGT+TGG | - | chr2_3:6774203-6774222 | Msa0274920:intron | 60.0% | |
| !! | CCACCAACGTGCTGACTGCA+TGG | + | chr2_3:6775101-6775120 | None:intergenic | 60.0% |
| CCATGCAGTCAGCACGTTGG+TGG | - | chr2_3:6775098-6775117 | Msa0274920:CDS | 60.0% | |
| TTGAGGCCTCGGAGGACACG+TGG | - | chr2_3:6771168-6771187 | Msa0274920:intron | 65.0% | |
| GACGGCCAGCCACCTCATGC+AGG | - | chr2_3:6773419-6773438 | Msa0274920:intron | 70.0% | |
| ! | CGGCGGCCACGTGTCCTCCG+AGG | + | chr2_3:6771177-6771196 | None:intergenic | 80.0% |
| ! | CGGAGGACACGTGGCCGCCG+AGG | - | chr2_3:6771177-6771196 | Msa0274920:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6770523 | 6775785 | 6770523 | ID=Msa0274920;Name=Msa0274920 |
| chr2_3 | mRNA | 6770523 | 6775785 | 6770523 | ID=Msa0274920-mRNA-1;Parent=Msa0274920;Name=Msa0274920-mRNA-1;_AED=0.15;_eAED=0.15;_QI=485|0.8|0.83|1|0.8|0.66|6|391|362 |
| chr2_3 | exon | 6770523 | 6770897 | 6770523 | ID=Msa0274920-mRNA-1:exon:3208;Parent=Msa0274920-mRNA-1 |
| chr2_3 | exon | 6771842 | 6772335 | 6771842 | ID=Msa0274920-mRNA-1:exon:3207;Parent=Msa0274920-mRNA-1 |
| chr2_3 | exon | 6772837 | 6772923 | 6772837 | ID=Msa0274920-mRNA-1:exon:3206;Parent=Msa0274920-mRNA-1 |
| chr2_3 | exon | 6773024 | 6773153 | 6773024 | ID=Msa0274920-mRNA-1:exon:3205;Parent=Msa0274920-mRNA-1 |
| chr2_3 | exon | 6773264 | 6773351 | 6773264 | ID=Msa0274920-mRNA-1:exon:3204;Parent=Msa0274920-mRNA-1 |
| chr2_3 | exon | 6774995 | 6775785 | 6774995 | ID=Msa0274920-mRNA-1:exon:3203;Parent=Msa0274920-mRNA-1 |
| chr2_3 | five_prime_UTR | 6775301 | 6775785 | 6775301 | ID=Msa0274920-mRNA-1:five_prime_utr;Parent=Msa0274920-mRNA-1 |
| chr2_3 | CDS | 6774995 | 6775300 | 6774995 | ID=Msa0274920-mRNA-1:cds;Parent=Msa0274920-mRNA-1 |
| chr2_3 | CDS | 6773264 | 6773351 | 6773264 | ID=Msa0274920-mRNA-1:cds;Parent=Msa0274920-mRNA-1 |
| chr2_3 | CDS | 6773024 | 6773153 | 6773024 | ID=Msa0274920-mRNA-1:cds;Parent=Msa0274920-mRNA-1 |
| chr2_3 | CDS | 6772837 | 6772923 | 6772837 | ID=Msa0274920-mRNA-1:cds;Parent=Msa0274920-mRNA-1 |
| chr2_3 | CDS | 6771858 | 6772335 | 6771858 | ID=Msa0274920-mRNA-1:cds;Parent=Msa0274920-mRNA-1 |
| chr2_3 | three_prime_UTR | 6771842 | 6771857 | 6771842 | ID=Msa0274920-mRNA-1:three_prime_utr;Parent=Msa0274920-mRNA-1 |
| chr2_3 | three_prime_UTR | 6770523 | 6770897 | 6770523 | ID=Msa0274920-mRNA-1:three_prime_utr;Parent=Msa0274920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
