Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195590 | AES64296.1 | 98.947 | 475 | 5 | 0 | 1 | 475 | 1 | 475 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195590 | sp|O24467|LE14B_PRUAR | 69.584 | 457 | 134 | 3 | 3 | 457 | 9 | 462 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195590 | G7IFM1 | 98.947 | 475 | 5 | 0 | 1 | 475 | 1 | 475 | 0.0 | 976 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142550 | Msa0195590 | 0.852926 | 3.350459e-61 | -8.615850e-47 |
| Msa0195590 | Msa0277490 | 0.949342 | 1.544711e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195590 | MtrunA17_Chr2g0286731 | 98.726 | 471 | 6 | 0 | 1 | 471 | 1 | 471 | 0.0 | 967 |
| Msa0195590 | MtrunA17_Chr1g0196321 | 68.000 | 450 | 140 | 2 | 18 | 463 | 35 | 484 | 0.0 | 644 |
| Msa0195590 | MtrunA17_Chr7g0253861 | 24.818 | 274 | 134 | 5 | 210 | 444 | 100 | 340 | 2.91e-18 | 85.9 |
| Msa0195590 | MtrunA17_Chr4g0067151 | 26.613 | 248 | 160 | 6 | 208 | 443 | 78 | 315 | 3.24e-16 | 79.7 |
| Msa0195590 | MtrunA17_Chr3g0093681 | 32.540 | 126 | 81 | 1 | 211 | 336 | 443 | 564 | 2.64e-14 | 75.1 |
| Msa0195590 | MtrunA17_Chr1g0172501 | 32.540 | 126 | 81 | 1 | 211 | 336 | 443 | 564 | 8.10e-14 | 73.6 |
| Msa0195590 | MtrunA17_Chr1g0185501 | 25.301 | 249 | 158 | 7 | 210 | 443 | 71 | 306 | 1.17e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195590 | AT4G03020.1 | 71.300 | 446 | 121 | 3 | 32 | 474 | 52 | 493 | 0.0 | 666 |
| Msa0195590 | AT4G03020.2 | 71.300 | 446 | 121 | 3 | 32 | 474 | 52 | 493 | 0.0 | 666 |
| Msa0195590 | AT4G03020.3 | 71.300 | 446 | 121 | 3 | 32 | 474 | 52 | 493 | 0.0 | 666 |
| Msa0195590 | AT2G43770.1 | 25.912 | 274 | 131 | 6 | 210 | 444 | 98 | 338 | 8.23e-20 | 90.9 |
Find 128 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAATTTCTTGCATATTT+AGG | 0.104439 | 2_1:-12437186 | None:intergenic |
| GATAATGATAATGATGAATT+TGG | 0.159616 | 2_1:+12436023 | Msa0195590:CDS |
| AATTGTCCACCGTAAGTTTC+TGG | 0.182078 | 2_1:-12434911 | None:intergenic |
| CTAAATATGCAAGAAATTTA+AGG | 0.217256 | 2_1:+12437187 | Msa0195590:CDS |
| GTGTGTGATGAATGAATTTA+AGG | 0.241607 | 2_1:-12433552 | None:intergenic |
| ACTCCAGTGGATCTTCTATT+TGG | 0.244163 | 2_1:-12438660 | None:intergenic |
| GGCCGTTATTTAATTTCTAA+TGG | 0.258615 | 2_1:+12436962 | Msa0195590:CDS |
| CTCTCCGGATACATATATTT+AGG | 0.300424 | 2_1:+12438730 | Msa0195590:three_prime_UTR |
| CCGATCCTGCATTGACAATA+TGG | 0.301448 | 2_1:-12435176 | None:intergenic |
| AAATAAGTGTAACAAACTTT+TGG | 0.307033 | 2_1:-12438823 | None:intergenic |
| TGCCAGCTGCAATCTCTTAA+AGG | 0.307367 | 2_1:-12438546 | None:intergenic |
| CTTGGGATGGTGACATTGTT+AGG | 0.316849 | 2_1:+12438598 | Msa0195590:CDS |
| TGTCCCATAGCTTGGTAGTT+TGG | 0.319852 | 2_1:-12436991 | None:intergenic |
| TCCACTGGAGTTCGTATTAG+AGG | 0.324570 | 2_1:+12438672 | Msa0195590:CDS |
| GCATTGACAATATGGATAAT+TGG | 0.329443 | 2_1:-12435168 | None:intergenic |
| TTAATCTAAGAATTTATGAT+AGG | 0.369737 | 2_1:-12438873 | None:intergenic |
| AACACAACACTCACAGTTGA+TGG | 0.372300 | 2_1:+12433582 | Msa0195590:five_prime_UTR |
| ATTGTTAGGTGGGAATTTCC+TGG | 0.376216 | 2_1:+12438612 | Msa0195590:CDS |
| TCTGGTCATCTCATATATTC+TGG | 0.377793 | 2_1:+12436593 | Msa0195590:CDS |
| AGTCGTGTTGTTCCTGGTAC+GGG | 0.382420 | 2_1:+12434282 | Msa0195590:CDS |
| ATCTTGATGGGGCATTTAGA+AGG | 0.389360 | 2_1:+12436911 | Msa0195590:CDS |
| AGGTGGGAATTTCCTGGAAA+TGG | 0.393643 | 2_1:+12438618 | Msa0195590:CDS |
| GTTATTTCTCACCATCATAT+AGG | 0.399373 | 2_1:+12437274 | Msa0195590:CDS |
| GCAGGAGGTTGACCATTTCC+AGG | 0.414172 | 2_1:-12438630 | None:intergenic |
| CTACCAAGCTATGGGACATA+AGG | 0.419416 | 2_1:+12436996 | Msa0195590:CDS |
| GTCTGCTTTGCTGATGAATC+TGG | 0.420608 | 2_1:+12436575 | Msa0195590:CDS |
| TCAATATGTGTATATGATCT+TGG | 0.429420 | 2_1:+12436107 | Msa0195590:CDS |
| CTTCTATTTGGAGGAGGAGC+AGG | 0.433878 | 2_1:-12438648 | None:intergenic |
| ATAATGATAATGATGAATTT+GGG | 0.436292 | 2_1:+12436024 | Msa0195590:CDS |
| ACAACCAGCTGGCATCTTGA+TGG | 0.437455 | 2_1:+12436898 | Msa0195590:CDS |
| TAAACCTACAGTCTGGGCCT+TGG | 0.442950 | 2_1:+12437129 | Msa0195590:intron |
| TTCTCTTACACCAATAGAAA+AGG | 0.444191 | 2_1:+12438798 | Msa0195590:three_prime_UTR |
| AATTTGAGTCGTGTTGTTCC+TGG | 0.446775 | 2_1:+12434276 | Msa0195590:CDS |
| CTTACAAGATATTGTCGATC+AGG | 0.447419 | 2_1:-12434952 | None:intergenic |
| ATCGACAATCCAAGGACCTT+TGG | 0.448041 | 2_1:-12434418 | None:intergenic |
| GATATCAGCATTGGATAGAA+AGG | 0.448504 | 2_1:-12438570 | None:intergenic |
| TTCCATTAGAAATTAAATAA+CGG | 0.450455 | 2_1:-12436964 | None:intergenic |
| CCTCAGAATTCCTGCTCACC+TGG | 0.452156 | 2_1:+12436145 | Msa0195590:CDS |
| GATGGGCGAGAGCTTGTGTC+TGG | 0.453921 | 2_1:+12436071 | Msa0195590:CDS |
| TTTGTACATATTTATCTCTC+CGG | 0.454546 | 2_1:+12438715 | Msa0195590:three_prime_UTR |
| ATTGAAACAGTGTTTGATGA+TGG | 0.457017 | 2_1:-12433522 | None:intergenic |
| GAGTCGTGTTGTTCCTGGTA+CGG | 0.457305 | 2_1:+12434281 | Msa0195590:CDS |
| ATTTGCCTACCAAAGGTCCT+TGG | 0.457941 | 2_1:+12434409 | Msa0195590:CDS |
| TTCATTAATAGTCGCGGGGA+TGG | 0.461834 | 2_1:+12436941 | Msa0195590:CDS |
| AGGCGTTGCTTTGCTGCAAA+AGG | 0.464029 | 2_1:+12436875 | Msa0195590:CDS |
| GCTACCTAAATATATGTATC+CGG | 0.471557 | 2_1:-12438734 | None:intergenic |
| CAACCAGCTGGCATCTTGAT+GGG | 0.472797 | 2_1:+12436899 | Msa0195590:CDS |
| ATGTTGCCAATGACTGGTCC+TGG | 0.479160 | 2_1:-12437215 | None:intergenic |
| CTTCCTTATGTCCCATAGCT+TGG | 0.483959 | 2_1:-12436999 | None:intergenic |
| GCATCCCCAGGACCAGTCAT+TGG | 0.489591 | 2_1:+12437209 | Msa0195590:CDS |
| TCGCTTCATTCTCCAATCAC+AGG | 0.490272 | 2_1:+12433638 | Msa0195590:five_prime_UTR |
| TATATGATGTTGACAAGGAC+TGG | 0.492556 | 2_1:+12434866 | Msa0195590:CDS |
| CAATGCTGATATCTTCAGCT+TGG | 0.492574 | 2_1:+12438580 | Msa0195590:CDS |
| CACCTTTAAGAGATTGCAGC+TGG | 0.492653 | 2_1:+12438544 | Msa0195590:CDS |
| CCAGTGGATCTTCTATTTGG+AGG | 0.494643 | 2_1:-12438657 | None:intergenic |
| CAGTCATTGGCAACATATCA+AGG | 0.494910 | 2_1:+12437222 | Msa0195590:CDS |
| CTTGATATGTTGCCAATGAC+TGG | 0.495230 | 2_1:-12437221 | None:intergenic |
| TTACATTCATTAATAGTCGC+GGG | 0.500203 | 2_1:+12436936 | Msa0195590:CDS |
| ATATGTAATACCAGGTGAGC+AGG | 0.501569 | 2_1:-12436155 | None:intergenic |
| AATTACCTGCATCAACTGTA+AGG | 0.508475 | 2_1:+12434307 | Msa0195590:CDS |
| ACATTTCTGCCAGAAACTTA+CGG | 0.508983 | 2_1:+12434902 | Msa0195590:CDS |
| GCAGGTAATTTCCCCGTACC+AGG | 0.509277 | 2_1:-12434294 | None:intergenic |
| TGAGGAATGAAACCTGTGAT+TGG | 0.511697 | 2_1:-12433650 | None:intergenic |
| TCCTTGGATTGTCGATCGCA+TGG | 0.513756 | 2_1:+12434425 | Msa0195590:CDS |
| ATTATCCATATTGTCAATGC+AGG | 0.514577 | 2_1:+12435171 | Msa0195590:CDS |
| CCGTGTTGCGTACTCTAGTT+CGG | 0.518140 | 2_1:+12437250 | Msa0195590:CDS |
| AGTAATGAATCTAGTGGAAG+TGG | 0.525470 | 2_1:+12434177 | Msa0195590:CDS |
| AATACAAGTTACCTATATGA+TGG | 0.526315 | 2_1:-12437285 | None:intergenic |
| CAAGCTGAAGATATCAGCAT+TGG | 0.526318 | 2_1:-12438579 | None:intergenic |
| AGGATGTTGGTAGGCAGAGA+AGG | 0.527556 | 2_1:+12434327 | Msa0195590:CDS |
| TCACATTCTTTGTAGGTGAG+TGG | 0.527712 | 2_1:+12438489 | Msa0195590:intron |
| AATGCTGATATCTTCAGCTT+GGG | 0.530130 | 2_1:+12438581 | Msa0195590:CDS |
| GGAAGTGGAATGGATGGAGA+AGG | 0.532430 | 2_1:+12434192 | Msa0195590:CDS |
| AAGACCAAACTACCAAGCTA+TGG | 0.533647 | 2_1:+12436987 | Msa0195590:CDS |
| TGCCCCATCAAGATGCCAGC+TGG | 0.534261 | 2_1:-12436902 | None:intergenic |
| GACCTGTACAGGTGTGGGAT+AGG | 0.535063 | 2_1:+12436855 | Msa0195590:intron |
| AGTCCCACTCGTCGTCTCCA+AGG | 0.538717 | 2_1:-12437146 | None:intergenic |
| TCTAGTGGAAGTGGAATGGA+TGG | 0.542029 | 2_1:+12434186 | Msa0195590:CDS |
| CTCTGTCTATATATATGACC+TGG | 0.550941 | 2_1:+12438227 | Msa0195590:CDS |
| TGAATCTAGTGGAAGTGGAA+TGG | 0.552690 | 2_1:+12434182 | Msa0195590:CDS |
| GGATGGTGACATTGTTAGGT+GGG | 0.553199 | 2_1:+12438602 | Msa0195590:CDS |
| GCTGCAAAAGGACAACCAGC+TGG | 0.555581 | 2_1:+12436887 | Msa0195590:CDS |
| TTGCACAGATCACAAAGCTC+AGG | 0.559290 | 2_1:+12434238 | Msa0195590:CDS |
| GTGGATCTTCTATTTGGAGG+AGG | 0.561933 | 2_1:-12438654 | None:intergenic |
| CCTCCAAATAGAAGATCCAC+TGG | 0.564277 | 2_1:+12438657 | Msa0195590:CDS |
| AACATCCTTACAGTTGATGC+AGG | 0.566179 | 2_1:-12434312 | None:intergenic |
| TGTTGCCAATGACTGGTCCT+GGG | 0.567625 | 2_1:-12437214 | None:intergenic |
| CAACATCATATATTCTGATG+TGG | 0.571580 | 2_1:-12434855 | None:intergenic |
| CTATTTGGAGGAGGAGCAGG+AGG | 0.573524 | 2_1:-12438645 | None:intergenic |
| ATTACATTCATTAATAGTCG+CGG | 0.577184 | 2_1:+12436935 | Msa0195590:CDS |
| TGCATCAACTGTAAGGATGT+TGG | 0.585388 | 2_1:+12434314 | Msa0195590:CDS |
| GGGATGGTGACATTGTTAGG+TGG | 0.586134 | 2_1:+12438601 | Msa0195590:CDS |
| TGGGCCTTGGAGACGACGAG+TGG | 0.586629 | 2_1:+12437142 | Msa0195590:CDS |
| CCCATGCGATCGACAATCCA+AGG | 0.588179 | 2_1:-12434426 | None:intergenic |
| AGACCAAACTACCAAGCTAT+GGG | 0.590086 | 2_1:+12436988 | Msa0195590:CDS |
| AAGAAATTTAAGGCATCCCC+AGG | 0.593421 | 2_1:+12437197 | Msa0195590:CDS |
| CCTTGGATTGTCGATCGCAT+GGG | 0.593733 | 2_1:+12434426 | Msa0195590:CDS |
| CCATATTGTCAATGCAGGAT+CGG | 0.598464 | 2_1:+12435176 | Msa0195590:CDS |
| ATTTACACTGGATCTAGTGA+TGG | 0.599754 | 2_1:+12438204 | Msa0195590:CDS |
| AGCCGCTATTTGCCTACCAA+AGG | 0.600990 | 2_1:+12434402 | Msa0195590:CDS |
| CGAGTGGGACTACCGGTGGA+TGG | 0.601037 | 2_1:+12437158 | Msa0195590:CDS |
| AACCAGCTGGCATCTTGATG+GGG | 0.601649 | 2_1:+12436900 | Msa0195590:CDS |
| GAGACGACGAGTGGGACTAC+CGG | 0.610203 | 2_1:+12437151 | Msa0195590:CDS |
| GGGCCTTGGAGACGACGAGT+GGG | 0.610369 | 2_1:+12437143 | Msa0195590:CDS |
| GTCGTGTTGTTCCTGGTACG+GGG | 0.611745 | 2_1:+12434283 | Msa0195590:CDS |
| GGCAGCAGTAATGAATCTAG+TGG | 0.613796 | 2_1:+12434171 | Msa0195590:CDS |
| TACATTCATTAATAGTCGCG+GGG | 0.623189 | 2_1:+12436937 | Msa0195590:CDS |
| ATTTAGGATAGTCCATCCAC+CGG | 0.623304 | 2_1:-12437170 | None:intergenic |
| CTGATATCTTCAGCTTGGGA+TGG | 0.627405 | 2_1:+12438585 | Msa0195590:CDS |
| CCGAACTAGAGTACGCAACA+CGG | 0.627548 | 2_1:-12437250 | None:intergenic |
| CCAGGTGAGCAGGAATTCTG+AGG | 0.628041 | 2_1:-12436145 | None:intergenic |
| GACCTTTGGTAGGCAAATAG+CGG | 0.632536 | 2_1:-12434404 | None:intergenic |
| ACAATCCAAGGACCTTTGGT+AGG | 0.633625 | 2_1:-12434414 | None:intergenic |
| GACTGTATGAATGATGGTAG+TGG | 0.634830 | 2_1:+12434150 | Msa0195590:CDS |
| ACAAGTGACTGTATGAATGA+TGG | 0.636150 | 2_1:+12434144 | Msa0195590:CDS |
| ACCTCTAATACGAACTCCAG+TGG | 0.636276 | 2_1:-12438673 | None:intergenic |
| TCAACTGTAAGGATGTTGGT+AGG | 0.641616 | 2_1:+12434318 | Msa0195590:CDS |
| CTAGAGTACGCAACACGGAG+TGG | 0.643743 | 2_1:-12437245 | None:intergenic |
| CAGAATATATGATGTTGACA+AGG | 0.644861 | 2_1:+12434861 | Msa0195590:CDS |
| ACACGACTCAAATTCTCATG+TGG | 0.650713 | 2_1:-12434267 | None:intergenic |
| AAGTGATGATAGTTTCTGCA+AGG | 0.652431 | 2_1:+12436616 | Msa0195590:CDS |
| AGATTCATCAGCAAAGCAGA+CGG | 0.654512 | 2_1:-12436573 | None:intergenic |
| ACGACGAGTGGGACTACCGG+TGG | 0.666395 | 2_1:+12437154 | Msa0195590:CDS |
| GTTGCCAATGACTGGTCCTG+GGG | 0.667116 | 2_1:-12437213 | None:intergenic |
| TGATGAATGAATTTAAGGAA+AGG | 0.692997 | 2_1:-12433547 | None:intergenic |
| TCATTGCAGGAAGTTCACGA+TGG | 0.705664 | 2_1:+12435984 | Msa0195590:intron |
| TTTCTGCCAGAAACTTACGG+TGG | 0.756256 | 2_1:+12434905 | Msa0195590:CDS |
| GATTGGAGAATGAAGCGATG+AGG | 0.760652 | 2_1:-12433633 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTATTTTTTTACATTT+AGG | + | chr2_1:12433947-12433966 | Msa0195590:intron | 10.0% |
| !!! | ATGCATATATAATTTTTAAA+AGG | - | chr2_1:12435644-12435663 | None:intergenic | 10.0% |
| !!! | ACATATTATTTTCTTATAAT+TGG | + | chr2_1:12436172-12436191 | Msa0195590:intron | 10.0% |
| !!! | ATTAAGAACTTTTTTTTTTT+TGG | - | chr2_1:12438388-12438407 | None:intergenic | 10.0% |
| !!! | TTTTGATTGATATAAGAAAA+GGG | - | chr2_1:12433824-12433843 | None:intergenic | 15.0% |
| !!! | ATTTTGATTGATATAAGAAA+AGG | - | chr2_1:12433825-12433844 | None:intergenic | 15.0% |
| !! | ATATCAATCAAAATTTAACT+TGG | + | chr2_1:12433831-12433850 | Msa0195590:intron | 15.0% |
| !!! | TATCAATCAAAATTTAACTT+GGG | + | chr2_1:12433832-12433851 | Msa0195590:intron | 15.0% |
| !!! | TATTTCTGAAACTATAATTA+TGG | + | chr2_1:12434739-12434758 | Msa0195590:intron | 15.0% |
| !!! | ATTTCTGAAACTATAATTAT+GGG | + | chr2_1:12434740-12434759 | Msa0195590:intron | 15.0% |
| !!! | TTGGATTAAATTGATAATAA+CGG | - | chr2_1:12435725-12435744 | None:intergenic | 15.0% |
| !!! | ATAATGATAATGATGAATTT+GGG | + | chr2_1:12436024-12436043 | Msa0195590:CDS | 15.0% |
| !!! | TGATATTATTTTCCTATAAT+TGG | + | chr2_1:12436237-12436256 | Msa0195590:intron | 15.0% |
| !! | TATTTCTTTATATGTTAGTA+TGG | + | chr2_1:12436495-12436514 | Msa0195590:intron | 15.0% |
| !! | TTCCATTAGAAATTAAATAA+CGG | - | chr2_1:12436967-12436986 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATCTTACTTCA+TGG | - | chr2_1:12437038-12437057 | None:intergenic | 15.0% |
| !! | TACAGATTTATTCTAATAAA+TGG | + | chr2_1:12437080-12437099 | Msa0195590:intron | 15.0% |
| !!! | TTATTGATGTTATATCATTT+TGG | + | chr2_1:12437944-12437963 | Msa0195590:intron | 15.0% |
| !!! | TTATTTTTCAATCGAATTTT+GGG | - | chr2_1:12437980-12437999 | None:intergenic | 15.0% |
| !!! | ATTATTTTTCAATCGAATTT+TGG | - | chr2_1:12437981-12438000 | None:intergenic | 15.0% |
| !!! | ACTAAATCCATTTTTAAAAT+TGG | + | chr2_1:12438441-12438460 | Msa0195590:intron | 15.0% |
| !!! | TGTTAAACCAATTTTAAAAA+TGG | - | chr2_1:12438451-12438470 | None:intergenic | 15.0% |
| !! | TTAATCTAAGAATTTATGAT+AGG | - | chr2_1:12438876-12438895 | None:intergenic | 15.0% |
| !! | ATTAAAGAGAAAATGAATGT+GGG | - | chr2_1:12433734-12433753 | None:intergenic | 20.0% |
| !! | AATTAAAGAGAAAATGAATG+TGG | - | chr2_1:12433735-12433754 | None:intergenic | 20.0% |
| !!! | TTAGTTCTACAAATGAAATT+AGG | - | chr2_1:12433902-12433921 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTTACATTTAGG+TGG | + | chr2_1:12433950-12433969 | Msa0195590:intron | 20.0% |
| !!! | GATAGAATTTTATCATAGTT+TGG | + | chr2_1:12434019-12434038 | Msa0195590:intron | 20.0% |
| !! | TTTAAGAATTCCTTTATCTA+AGG | + | chr2_1:12434059-12434078 | Msa0195590:intron | 20.0% |
| !! | TTAAGAATTCCTTTATCTAA+GGG | + | chr2_1:12434060-12434079 | Msa0195590:intron | 20.0% |
| !!! | TCCATTTTTCAAAATACTAT+CGG | - | chr2_1:12434607-12434626 | None:intergenic | 20.0% |
| !! | GTCATATGAATGATTTATAA+TGG | + | chr2_1:12435361-12435380 | Msa0195590:intron | 20.0% |
| !! | TTTAAAAGGAAAATGACAAA+GGG | - | chr2_1:12435630-12435649 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGGAAAATGACAA+AGG | - | chr2_1:12435631-12435650 | None:intergenic | 20.0% |
| !!! | GATAATGATAATGATGAATT+TGG | + | chr2_1:12436023-12436042 | Msa0195590:CDS | 20.0% |
| !!! | TTTCTCTATCAAATTTTCAA+CGG | + | chr2_1:12436049-12436068 | Msa0195590:CDS | 20.0% |
| !! | AGAAAATAATATGTAATACC+AGG | - | chr2_1:12436166-12436185 | None:intergenic | 20.0% |
| !!! | AAAGAAATTAAGTAGCTTTA+AGG | - | chr2_1:12436469-12436488 | None:intergenic | 20.0% |
| !!! | TTACTTTCATTTCATTGATT+TGG | + | chr2_1:12436794-12436813 | Msa0195590:intron | 20.0% |
| !! | CTTAAATTTCTTGCATATTT+AGG | - | chr2_1:12437189-12437208 | None:intergenic | 20.0% |
| !! | CTAAATATGCAAGAAATTTA+AGG | + | chr2_1:12437187-12437206 | Msa0195590:CDS | 20.0% |
| !!! | ATATAGGTAACTTGTATTTT+TGG | + | chr2_1:12437290-12437309 | Msa0195590:intron | 20.0% |
| !! | TCTGAATTTCCAAAATATTT+AGG | + | chr2_1:12437360-12437379 | Msa0195590:intron | 20.0% |
| !!! | AGTTCAAAACCTAAATATTT+TGG | - | chr2_1:12437372-12437391 | None:intergenic | 20.0% |
| !! | TTTGTTTATAATATCACTCA+AGG | + | chr2_1:12437575-12437594 | Msa0195590:intron | 20.0% |
| !! | AAATCAAAAGAGAAAAGAAA+AGG | - | chr2_1:12437694-12437713 | None:intergenic | 20.0% |
| !!! | AACGATAACAATTTTTTTCT+TGG | + | chr2_1:12437817-12437836 | Msa0195590:intron | 20.0% |
| !! | TCAACTAAAACATTAATTCA+CGG | - | chr2_1:12438047-12438066 | None:intergenic | 20.0% |
| !!! | AAATAAGTGTAACAAACTTT+TGG | - | chr2_1:12438826-12438845 | None:intergenic | 20.0% |
| ! | TGATGAATGAATTTAAGGAA+AGG | - | chr2_1:12433550-12433569 | None:intergenic | 25.0% |
| !! | CTTGGGAAAAAAAAAGTTTT+TGG | + | chr2_1:12433849-12433868 | Msa0195590:intron | 25.0% |
| !! | TAGGTGGTAATTTTACATTT+AGG | + | chr2_1:12433966-12433985 | Msa0195590:intron | 25.0% |
| ! | TTTACATTTAGGTGGTAATT+TGG | + | chr2_1:12433958-12433977 | Msa0195590:intron | 25.0% |
| ! | TTACATTTAGGTGGTAATTT+GGG | + | chr2_1:12433959-12433978 | Msa0195590:intron | 25.0% |
| !! | TTGATATGATGCATTTTTGT+AGG | + | chr2_1:12434088-12434107 | Msa0195590:intron | 25.0% |
| ! | ATAAGTAACTACAATCAGAA+TGG | - | chr2_1:12434526-12434545 | None:intergenic | 25.0% |
| !!! | ACCGATAGTATTTTGAAAAA+TGG | + | chr2_1:12434603-12434622 | Msa0195590:intron | 25.0% |
| ! | TTTGTGCTTTGTATGAAAAA+GGG | + | chr2_1:12434829-12434848 | Msa0195590:intron | 25.0% |
| ! | GTCAAAATGCAAAGTTAAAA+GGG | - | chr2_1:12435107-12435126 | None:intergenic | 25.0% |
| ! | TGTCAAAATGCAAAGTTAAA+AGG | - | chr2_1:12435108-12435127 | None:intergenic | 25.0% |
| ! | AATTGTTAATTCATCATTGC+AGG | + | chr2_1:12435128-12435147 | Msa0195590:intron | 25.0% |
| ! | TAACAATATGAGAATTAGCT+GGG | - | chr2_1:12435293-12435312 | None:intergenic | 25.0% |
| ! | TTAACAATATGAGAATTAGC+TGG | - | chr2_1:12435294-12435313 | None:intergenic | 25.0% |
| ! | TGACAACTTATGAGTTTAAT+AGG | - | chr2_1:12435534-12435553 | None:intergenic | 25.0% |
| ! | TTAACTTTGACACCAAATAT+TGG | + | chr2_1:12435699-12435718 | Msa0195590:intron | 25.0% |
| ! | GTATTTATACATATGCGTAT+AGG | + | chr2_1:12435892-12435911 | Msa0195590:intron | 25.0% |
| ! | TCAATATGTGTATATGATCT+TGG | + | chr2_1:12436107-12436126 | Msa0195590:CDS | 25.0% |
| ! | AAATCATTTCTAACAGTACA+TGG | - | chr2_1:12436415-12436434 | None:intergenic | 25.0% |
| ! | CTAATTTAAATCACCAACAA+TGG | - | chr2_1:12436733-12436752 | None:intergenic | 25.0% |
| ! | ATTACATTCATTAATAGTCG+CGG | + | chr2_1:12436935-12436954 | Msa0195590:CDS | 25.0% |
| ! | TATTATTTAAACCTACAGTC+TGG | + | chr2_1:12437122-12437141 | Msa0195590:intron | 25.0% |
| ! | ATTATTTAAACCTACAGTCT+GGG | + | chr2_1:12437123-12437142 | Msa0195590:intron | 25.0% |
| ! | AATACAAGTTACCTATATGA+TGG | - | chr2_1:12437288-12437307 | None:intergenic | 25.0% |
| ! | ATATTTCATGTCAAGAAATC+TGG | - | chr2_1:12437407-12437426 | None:intergenic | 25.0% |
| ! | ACATCAAAAATTTGAACCTA+CGG | - | chr2_1:12437527-12437546 | None:intergenic | 25.0% |
| !! | TTTTTGTGGTCATTTAAATC+TGG | - | chr2_1:12437786-12437805 | None:intergenic | 25.0% |
| ! | AAAAATTGTTATCGTTTCAG+AGG | - | chr2_1:12437813-12437832 | None:intergenic | 25.0% |
| ! | GATATAACATCAATAAAGCA+TGG | - | chr2_1:12437940-12437959 | None:intergenic | 25.0% |
| ! | AGGATTTATCAATTTCAACA+TGG | - | chr2_1:12438020-12438039 | None:intergenic | 25.0% |
| ! | CAACTAAAACATTAATTCAC+GGG | - | chr2_1:12438046-12438065 | None:intergenic | 25.0% |
| !! | ATTTAGTTTATGTACACTGT+TGG | - | chr2_1:12438428-12438447 | None:intergenic | 25.0% |
| ! | TTTAGATTCACATTCTTTGT+AGG | + | chr2_1:12438482-12438501 | Msa0195590:intron | 25.0% |
| ! | TTTGTACATATTTATCTCTC+CGG | + | chr2_1:12438715-12438734 | Msa0195590:three_prime_UTR | 25.0% |
| ! | TTACAAAGCTTACAAAAACA+AGG | - | chr2_1:12438852-12438871 | None:intergenic | 25.0% |
| ATTGAAACAGTGTTTGATGA+TGG | - | chr2_1:12433525-12433544 | None:intergenic | 30.0% | |
| GTGTGTGATGAATGAATTTA+AGG | - | chr2_1:12433555-12433574 | None:intergenic | 30.0% | |
| ATTCACCATCACTAAAACAA+GGG | - | chr2_1:12433689-12433708 | None:intergenic | 30.0% | |
| AATTCACCATCACTAAAACA+AGG | - | chr2_1:12433690-12433709 | None:intergenic | 30.0% | |
| GATTGATATAAGAAAAGGGT+CGG | - | chr2_1:12433820-12433839 | None:intergenic | 30.0% | |
| GAACTAATATTCATAGTGTG+AGG | + | chr2_1:12433915-12433934 | Msa0195590:intron | 30.0% | |
| ! | GTGGTAATTTTACATTTAGG+TGG | + | chr2_1:12433969-12433988 | Msa0195590:intron | 30.0% |
| TCAAAGAAACCCTTAGATAA+AGG | - | chr2_1:12434072-12434091 | None:intergenic | 30.0% | |
| !! | AAGGTAATTTTTCTGGAAGA+GGG | + | chr2_1:12434346-12434365 | Msa0195590:CDS | 30.0% |
| ! | TCTTTTTATTGCTGGATTTC+AGG | + | chr2_1:12434488-12434507 | Msa0195590:CDS | 30.0% |
| TTGAAAGTAACTACATGTGT+TGG | + | chr2_1:12434632-12434651 | Msa0195590:intron | 30.0% | |
| AACTATAATTATGGGACCAA+AGG | + | chr2_1:12434748-12434767 | Msa0195590:intron | 30.0% | |
| ACTATAATTATGGGACCAAA+GGG | + | chr2_1:12434749-12434768 | Msa0195590:intron | 30.0% | |
| GTTTGTGCTTTGTATGAAAA+AGG | + | chr2_1:12434828-12434847 | Msa0195590:intron | 30.0% | |
| CAACATCATATATTCTGATG+TGG | - | chr2_1:12434858-12434877 | None:intergenic | 30.0% | |
| CAGAATATATGATGTTGACA+AGG | + | chr2_1:12434861-12434880 | Msa0195590:CDS | 30.0% | |
| !! | TTCAACTTGTTTTCCATATG+AGG | + | chr2_1:12434975-12434994 | Msa0195590:intron | 30.0% |
| ! | GCATTGACAATATGGATAAT+TGG | - | chr2_1:12435171-12435190 | None:intergenic | 30.0% |
| ATTATCCATATTGTCAATGC+AGG | + | chr2_1:12435171-12435190 | Msa0195590:CDS | 30.0% | |
| !! | CCTTAAATTTTATAGCCTTG+CGG | - | chr2_1:12435430-12435449 | None:intergenic | 30.0% |
| TGATAATAACGGCCAATATT+TGG | - | chr2_1:12435714-12435733 | None:intergenic | 30.0% | |
| AACTTAAGTGAATTATGGAG+AGG | - | chr2_1:12435750-12435769 | None:intergenic | 30.0% | |
| GTGAGAACTTAAGTGAATTA+TGG | - | chr2_1:12435755-12435774 | None:intergenic | 30.0% | |
| ATAGAACGTGTAATTGCTAA+GGG | - | chr2_1:12435796-12435815 | None:intergenic | 30.0% | |
| ATAAATCCTTCTTTCATTGC+AGG | + | chr2_1:12435971-12435990 | Msa0195590:intron | 30.0% | |
| ! | TCTATCAAATTTTCAACGGA+TGG | + | chr2_1:12436053-12436072 | Msa0195590:CDS | 30.0% |
| ! | CTATCAAATTTTCAACGGAT+GGG | + | chr2_1:12436054-12436073 | Msa0195590:CDS | 30.0% |
| ACAAATCAGCAACCAATTAT+AGG | - | chr2_1:12436252-12436271 | None:intergenic | 30.0% | |
| ACCTCAAACTTCTTACTAAT+GGG | - | chr2_1:12436332-12436351 | None:intergenic | 30.0% | |
| AACCTCAAACTTCTTACTAA+TGG | - | chr2_1:12436333-12436352 | None:intergenic | 30.0% | |
| ATCAGACTGCAACATAAAAA+AGG | - | chr2_1:12436546-12436565 | None:intergenic | 30.0% | |
| CGAAGTCTCAAATAGTTATA+AGG | - | chr2_1:12436651-12436670 | None:intergenic | 30.0% | |
| TTACATTCATTAATAGTCGC+GGG | + | chr2_1:12436936-12436955 | Msa0195590:CDS | 30.0% | |
| ! | GGCCGTTATTTAATTTCTAA+TGG | + | chr2_1:12436962-12436981 | Msa0195590:CDS | 30.0% |
| ! | TTTTTGTCCTTCACTTTGTT+TGG | + | chr2_1:12437053-12437072 | Msa0195590:intron | 30.0% |
| !! | GTTATTTCTCACCATCATAT+AGG | + | chr2_1:12437274-12437293 | Msa0195590:CDS | 30.0% |
| !!! | TTTAGGTTTTGAACTGCTAA+TGG | + | chr2_1:12437377-12437396 | Msa0195590:intron | 30.0% |
| ! | ATATGTTTTGCTTAGTAGCT+AGG | + | chr2_1:12437479-12437498 | Msa0195590:intron | 30.0% |
| TAAGACGATAAATGAGTACA+AGG | - | chr2_1:12437643-12437662 | None:intergenic | 30.0% | |
| GTCTTATCTTGCAATACTAT+TGG | + | chr2_1:12437657-12437676 | Msa0195590:intron | 30.0% | |
| AAACATTAATTCACGGGAAA+AGG | - | chr2_1:12438040-12438059 | None:intergenic | 30.0% | |
| GAATTAATATTGCAGACTTG+AGG | - | chr2_1:12438082-12438101 | None:intergenic | 30.0% | |
| GGTCAAAAATACATTTACAC+TGG | + | chr2_1:12438192-12438211 | Msa0195590:CDS | 30.0% | |
| !! | TATAAGCAAGTGTTTTTACC+AGG | - | chr2_1:12438248-12438267 | None:intergenic | 30.0% |
| ! | ACATGATTAGTTGTGATTTG+TGG | - | chr2_1:12438312-12438331 | None:intergenic | 30.0% |
| GCTACCTAAATATATGTATC+CGG | - | chr2_1:12438737-12438756 | None:intergenic | 30.0% | |
| TTCTCTTACACCAATAGAAA+AGG | + | chr2_1:12438798-12438817 | Msa0195590:three_prime_UTR | 30.0% | |
| !!! | ACTTTTGGAACCTTTTCTAT+TGG | - | chr2_1:12438811-12438830 | None:intergenic | 30.0% |
| TTCACCATCACTAAAACAAG+GGG | - | chr2_1:12433688-12433707 | None:intergenic | 35.0% | |
| AAGAGAAAATGAATGTGGGT+TGG | - | chr2_1:12433730-12433749 | None:intergenic | 35.0% | |
| ATTCATAGTGTGAGGCTAAA+AGG | + | chr2_1:12433923-12433942 | Msa0195590:intron | 35.0% | |
| ACAAGTGACTGTATGAATGA+TGG | + | chr2_1:12434144-12434163 | Msa0195590:CDS | 35.0% | |
| AGTAATGAATCTAGTGGAAG+TGG | + | chr2_1:12434177-12434196 | Msa0195590:CDS | 35.0% | |
| AATTACCTGCATCAACTGTA+AGG | + | chr2_1:12434307-12434326 | Msa0195590:CDS | 35.0% | |
| !! | GAAGGTAATTTTTCTGGAAG+AGG | + | chr2_1:12434345-12434364 | Msa0195590:CDS | 35.0% |
| ! | GATGGTTCTCTTTTTATTGC+TGG | + | chr2_1:12434480-12434499 | Msa0195590:CDS | 35.0% |
| AGTAACTACAATCAGAATGG+TGG | - | chr2_1:12434523-12434542 | None:intergenic | 35.0% | |
| TGAAGTGAAGCTGAAATATG+AGG | + | chr2_1:12434559-12434578 | Msa0195590:intron | 35.0% | |
| GTAACGATTTAAAGACCCTT+TGG | - | chr2_1:12434767-12434786 | None:intergenic | 35.0% | |
| GGTCTTTAAATCGTTACTTG+TGG | + | chr2_1:12434770-12434789 | Msa0195590:intron | 35.0% | |
| TGACAAAAAATCCTTACTCG+CGG | + | chr2_1:12434803-12434822 | Msa0195590:intron | 35.0% | |
| TATATGATGTTGACAAGGAC+TGG | + | chr2_1:12434866-12434885 | Msa0195590:CDS | 35.0% | |
| ACATTTCTGCCAGAAACTTA+CGG | + | chr2_1:12434902-12434921 | Msa0195590:CDS | 35.0% | |
| CTTACAAGATATTGTCGATC+AGG | - | chr2_1:12434955-12434974 | None:intergenic | 35.0% | |
| !! | AACTTGTTTTCCATATGAGG+TGG | + | chr2_1:12434978-12434997 | Msa0195590:intron | 35.0% |
| CAAAGTTAAAAGGGACAAAC+TGG | - | chr2_1:12435098-12435117 | None:intergenic | 35.0% | |
| !! | GCAATTTGCTAATTGAACGA+AGG | - | chr2_1:12435252-12435271 | None:intergenic | 35.0% |
| CCGCAAGGCTATAAAATTTA+AGG | + | chr2_1:12435427-12435446 | Msa0195590:intron | 35.0% | |
| CTCTCTGTATTCTTGCTAAA+TGG | + | chr2_1:12435556-12435575 | Msa0195590:intron | 35.0% | |
| GAAAATGACAAAGGGTGAAA+AGG | - | chr2_1:12435622-12435641 | None:intergenic | 35.0% | |
| AAATGAGATCAATTGACACC+AGG | + | chr2_1:12435667-12435686 | Msa0195590:intron | 35.0% | |
| CAAAGTTAAACTTTGACACC+TGG | - | chr2_1:12435688-12435707 | None:intergenic | 35.0% | |
| GATAGAACGTGTAATTGCTA+AGG | - | chr2_1:12435797-12435816 | None:intergenic | 35.0% | |
| TTGAAGTGTGTATATGCACA+TGG | - | chr2_1:12435931-12435950 | None:intergenic | 35.0% | |
| GATTTGTCCTAAATCGCTTT+CGG | + | chr2_1:12436265-12436284 | Msa0195590:intron | 35.0% | |
| CAATAATCCGAAAGCGATTT+AGG | - | chr2_1:12436275-12436294 | None:intergenic | 35.0% | |
| ! | GCTCAAAATATCGAGTCTTT+TGG | + | chr2_1:12436305-12436324 | Msa0195590:intron | 35.0% |
| TCCCATTAGTAAGAAGTTTG+AGG | + | chr2_1:12436328-12436347 | Msa0195590:intron | 35.0% | |
| ! | GTAAGAAGTTTGAGGTTTCA+AGG | + | chr2_1:12436336-12436355 | Msa0195590:intron | 35.0% |
| TTGAGGTTTCAAGGAAGTAA+TGG | + | chr2_1:12436345-12436364 | Msa0195590:intron | 35.0% | |
| TCTGGTCATCTCATATATTC+TGG | + | chr2_1:12436593-12436612 | Msa0195590:CDS | 35.0% | |
| AAGTGATGATAGTTTCTGCA+AGG | + | chr2_1:12436616-12436635 | Msa0195590:CDS | 35.0% | |
| GCATGTCATTATTCCATTGT+TGG | + | chr2_1:12436717-12436736 | Msa0195590:intron | 35.0% | |
| TACATTCATTAATAGTCGCG+GGG | + | chr2_1:12436937-12436956 | Msa0195590:CDS | 35.0% | |
| GTATCTACCAAACAAAGTGA+AGG | - | chr2_1:12437063-12437082 | None:intergenic | 35.0% | |
| !!! | ATTCCATAGCTTTTAGCTCA+CGG | + | chr2_1:12437448-12437467 | Msa0195590:intron | 35.0% |
| GTGGTTAAATTGTTATCCGT+AGG | + | chr2_1:12437508-12437527 | Msa0195590:intron | 35.0% | |
| ! | GTTTCAGAGGAAACTTTTTG+TGG | - | chr2_1:12437800-12437819 | None:intergenic | 35.0% |
| !!! | TGAAAGTACCCTTTTGACTT+AGG | + | chr2_1:12437911-12437930 | Msa0195590:intron | 35.0% |
| CATGGTAACCTAAGTCAAAA+GGG | - | chr2_1:12437922-12437941 | None:intergenic | 35.0% | |
| TGCAAAGAGTTAAGAGAACA+TGG | - | chr2_1:12438118-12438137 | None:intergenic | 35.0% | |
| ATTTACACTGGATCTAGTGA+TGG | + | chr2_1:12438204-12438223 | Msa0195590:CDS | 35.0% | |
| CTCTGTCTATATATATGACC+TGG | + | chr2_1:12438227-12438246 | Msa0195590:CDS | 35.0% | |
| !! | TGTCAAAAGTTCTGAACGAT+CGG | + | chr2_1:12438358-12438377 | Msa0195590:intron | 35.0% |
| ! | GATATCAGCATTGGATAGAA+AGG | - | chr2_1:12438573-12438592 | None:intergenic | 35.0% |
| AATGCTGATATCTTCAGCTT+GGG | + | chr2_1:12438581-12438600 | Msa0195590:CDS | 35.0% | |
| CTCTCCGGATACATATATTT+AGG | + | chr2_1:12438730-12438749 | Msa0195590:three_prime_UTR | 35.0% | |
| AACACAACACTCACAGTTGA+TGG | + | chr2_1:12433582-12433601 | Msa0195590:five_prime_UTR | 40.0% | |
| TGAGGAATGAAACCTGTGAT+TGG | - | chr2_1:12433653-12433672 | None:intergenic | 40.0% | |
| TCACCATCACTAAAACAAGG+GGG | - | chr2_1:12433687-12433706 | None:intergenic | 40.0% | |
| GACTGTATGAATGATGGTAG+TGG | + | chr2_1:12434150-12434169 | Msa0195590:CDS | 40.0% | |
| TGAATCTAGTGGAAGTGGAA+TGG | + | chr2_1:12434182-12434201 | Msa0195590:CDS | 40.0% | |
| ACACGACTCAAATTCTCATG+TGG | - | chr2_1:12434270-12434289 | None:intergenic | 40.0% | |
| ! | AATTTGAGTCGTGTTGTTCC+TGG | + | chr2_1:12434276-12434295 | Msa0195590:CDS | 40.0% |
| ! | AACATCCTTACAGTTGATGC+AGG | - | chr2_1:12434315-12434334 | None:intergenic | 40.0% |
| TGCATCAACTGTAAGGATGT+TGG | + | chr2_1:12434314-12434333 | Msa0195590:CDS | 40.0% | |
| TCAACTGTAAGGATGTTGGT+AGG | + | chr2_1:12434318-12434337 | Msa0195590:CDS | 40.0% | |
| ! | GGCAGAGAAGGTAATTTTTC+TGG | + | chr2_1:12434339-12434358 | Msa0195590:CDS | 40.0% |
| ! | GTTTCGCAGTTTTCAGATGA+TGG | + | chr2_1:12434462-12434481 | Msa0195590:CDS | 40.0% |
| !! | TACATGTGTTGGTGTTGTGT+TGG | + | chr2_1:12434643-12434662 | Msa0195590:intron | 40.0% |
| AATTGTCCACCGTAAGTTTC+TGG | - | chr2_1:12434914-12434933 | None:intergenic | 40.0% | |
| CAGAATTGGCTGTTTATAGC+AGG | - | chr2_1:12435034-12435053 | None:intergenic | 40.0% | |
| TAAACAGCCAATTCTGACCA+TGG | + | chr2_1:12435038-12435057 | Msa0195590:intron | 40.0% | |
| TTAGATGAATTCACGAGCCA+TGG | - | chr2_1:12435058-12435077 | None:intergenic | 40.0% | |
| CCATATTGTCAATGCAGGAT+CGG | + | chr2_1:12435176-12435195 | Msa0195590:CDS | 40.0% | |
| CAATATGAGAATTAGCTGGG+TGG | - | chr2_1:12435290-12435309 | None:intergenic | 40.0% | |
| AATGGTAGTTCACTGCAAGA+AGG | + | chr2_1:12435574-12435593 | Msa0195590:intron | 40.0% | |
| AGTGAATTATGGAGAGGCTT+TGG | - | chr2_1:12435744-12435763 | None:intergenic | 40.0% | |
| AGTTCTCACATGTTGTTCGA+CGG | + | chr2_1:12435766-12435785 | Msa0195590:intron | 40.0% | |
| TTCTTCGGCAAGCAACTAAA+AGG | - | chr2_1:12435821-12435840 | None:intergenic | 40.0% | |
| CGTGATGATCACAGATTCTT+CGG | - | chr2_1:12435836-12435855 | None:intergenic | 40.0% | |
| GAACTTCCTGCAATGAAAGA+AGG | - | chr2_1:12435980-12435999 | None:intergenic | 40.0% | |
| ATATGTAATACCAGGTGAGC+AGG | - | chr2_1:12436158-12436177 | None:intergenic | 40.0% | |
| ACATGGATACGTGTCAAACA+AGG | - | chr2_1:12436398-12436417 | None:intergenic | 40.0% | |
| AGATTCATCAGCAAAGCAGA+CGG | - | chr2_1:12436576-12436595 | None:intergenic | 40.0% | |
| AAAAGTGACACAAGCATCTG+CGG | - | chr2_1:12436681-12436700 | None:intergenic | 40.0% | |
| GCTGTTATTATGACCTGTAC+AGG | + | chr2_1:12436844-12436863 | Msa0195590:intron | 40.0% | |
| TATTATGACCTGTACAGGTG+TGG | + | chr2_1:12436849-12436868 | Msa0195590:intron | 40.0% | |
| ATTATGACCTGTACAGGTGT+GGG | + | chr2_1:12436850-12436869 | Msa0195590:intron | 40.0% | |
| ! | ATCTTGATGGGGCATTTAGA+AGG | + | chr2_1:12436911-12436930 | Msa0195590:CDS | 40.0% |
| AAGACCAAACTACCAAGCTA+TGG | + | chr2_1:12436987-12437006 | Msa0195590:CDS | 40.0% | |
| AGACCAAACTACCAAGCTAT+GGG | + | chr2_1:12436988-12437007 | Msa0195590:CDS | 40.0% | |
| ! | ATTTAGGATAGTCCATCCAC+CGG | - | chr2_1:12437173-12437192 | None:intergenic | 40.0% |
| ! | AAGAAATTTAAGGCATCCCC+AGG | + | chr2_1:12437197-12437216 | Msa0195590:CDS | 40.0% |
| CTTGATATGTTGCCAATGAC+TGG | - | chr2_1:12437224-12437243 | None:intergenic | 40.0% | |
| CAGTCATTGGCAACATATCA+AGG | + | chr2_1:12437222-12437241 | Msa0195590:CDS | 40.0% | |
| AGAGCAGTGATATACTAGAG+TGG | - | chr2_1:12437323-12437342 | None:intergenic | 40.0% | |
| TTACCGTGAGCTAAAAGCTA+TGG | - | chr2_1:12437454-12437473 | None:intergenic | 40.0% | |
| TTTGCTTAGTAGCTAGGAGT+TGG | + | chr2_1:12437485-12437504 | Msa0195590:intron | 40.0% | |
| TTGCTTAGTAGCTAGGAGTT+GGG | + | chr2_1:12437486-12437505 | Msa0195590:intron | 40.0% | |
| ! | TCAGGATTTCCAAAAGCACA+CGG | - | chr2_1:12437891-12437910 | None:intergenic | 40.0% |
| !! | GTCAAAAGGGTACTTTCATC+AGG | - | chr2_1:12437909-12437928 | None:intergenic | 40.0% |
| GCATGGTAACCTAAGTCAAA+AGG | - | chr2_1:12437923-12437942 | None:intergenic | 40.0% | |
| ! | TTTTTGACCAGTGCTGCAAA+AGG | - | chr2_1:12438181-12438200 | None:intergenic | 40.0% |
| TGTACACTGTTGGTGTAAAG+AGG | - | chr2_1:12438418-12438437 | None:intergenic | 40.0% | |
| TCACATTCTTTGTAGGTGAG+TGG | + | chr2_1:12438489-12438508 | Msa0195590:intron | 40.0% | |
| CAAGCTGAAGATATCAGCAT+TGG | - | chr2_1:12438582-12438601 | None:intergenic | 40.0% | |
| CAATGCTGATATCTTCAGCT+TGG | + | chr2_1:12438580-12438599 | Msa0195590:CDS | 40.0% | |
| ATTGTTAGGTGGGAATTTCC+TGG | + | chr2_1:12438612-12438631 | Msa0195590:CDS | 40.0% | |
| ACTCCAGTGGATCTTCTATT+TGG | - | chr2_1:12438663-12438682 | None:intergenic | 40.0% | |
| GATTGGAGAATGAAGCGATG+AGG | - | chr2_1:12433636-12433655 | None:intergenic | 45.0% | |
| TCGCTTCATTCTCCAATCAC+AGG | + | chr2_1:12433638-12433657 | Msa0195590:five_prime_UTR | 45.0% | |
| CTAAAACAAGGGGGGTTTAG+AGG | - | chr2_1:12433678-12433697 | None:intergenic | 45.0% | |
| !!! | AACCCCCCTTGTTTTAGTGA+TGG | + | chr2_1:12433681-12433700 | Msa0195590:intron | 45.0% |
| CACCATCACTAAAACAAGGG+GGG | - | chr2_1:12433686-12433705 | None:intergenic | 45.0% | |
| GGCAGCAGTAATGAATCTAG+TGG | + | chr2_1:12434171-12434190 | Msa0195590:CDS | 45.0% | |
| TCTAGTGGAAGTGGAATGGA+TGG | + | chr2_1:12434186-12434205 | Msa0195590:CDS | 45.0% | |
| TTGCACAGATCACAAAGCTC+AGG | + | chr2_1:12434238-12434257 | Msa0195590:CDS | 45.0% | |
| GACCTTTGGTAGGCAAATAG+CGG | - | chr2_1:12434407-12434426 | None:intergenic | 45.0% | |
| ATTTGCCTACCAAAGGTCCT+TGG | + | chr2_1:12434409-12434428 | Msa0195590:CDS | 45.0% | |
| ACAATCCAAGGACCTTTGGT+AGG | - | chr2_1:12434417-12434436 | None:intergenic | 45.0% | |
| ATCGACAATCCAAGGACCTT+TGG | - | chr2_1:12434421-12434440 | None:intergenic | 45.0% | |
| ! | ACACCCTTAATCGGAAGTGT+CGG | + | chr2_1:12434675-12434694 | Msa0195590:intron | 45.0% |
| ACACCGACACTTCCGATTAA+GGG | - | chr2_1:12434681-12434700 | None:intergenic | 45.0% | |
| AACACCGACACTTCCGATTA+AGG | - | chr2_1:12434682-12434701 | None:intergenic | 45.0% | |
| TTTCTGCCAGAAACTTACGG+TGG | + | chr2_1:12434905-12434924 | Msa0195590:CDS | 45.0% | |
| ! | CATTTGCCAGCTTTCTAGGA+TGG | + | chr2_1:12435001-12435020 | Msa0195590:intron | 45.0% |
| AATCTGCCATCCTAGAAAGC+TGG | - | chr2_1:12435010-12435029 | None:intergenic | 45.0% | |
| ! | CCGATCCTGCATTGACAATA+TGG | - | chr2_1:12435179-12435198 | None:intergenic | 45.0% |
| GACAAAAAAACTCGACCGCA+AGG | + | chr2_1:12435412-12435431 | Msa0195590:intron | 45.0% | |
| TCACTGCAAGAAGGATGCAT+AGG | + | chr2_1:12435583-12435602 | Msa0195590:intron | 45.0% | |
| CACTGCAAGAAGGATGCATA+GGG | + | chr2_1:12435584-12435603 | Msa0195590:intron | 45.0% | |
| ACTGCAAGAAGGATGCATAG+GGG | + | chr2_1:12435585-12435604 | Msa0195590:intron | 45.0% | |
| GAACGTGTAATTGCTAAGGG+TGG | - | chr2_1:12435793-12435812 | None:intergenic | 45.0% | |
| TCATTGCAGGAAGTTCACGA+TGG | + | chr2_1:12435984-12436003 | Msa0195590:intron | 45.0% | |
| GTCTGCTTTGCTGATGAATC+TGG | + | chr2_1:12436575-12436594 | Msa0195590:CDS | 45.0% | |
| TTCATTAATAGTCGCGGGGA+TGG | + | chr2_1:12436941-12436960 | Msa0195590:CDS | 45.0% | |
| ! | TGTCCCATAGCTTGGTAGTT+TGG | - | chr2_1:12436994-12437013 | None:intergenic | 45.0% |
| CTACCAAGCTATGGGACATA+AGG | + | chr2_1:12436996-12437015 | Msa0195590:CDS | 45.0% | |
| CTTCCTTATGTCCCATAGCT+TGG | - | chr2_1:12437002-12437021 | None:intergenic | 45.0% | |
| AGTGCTGCAAAAGGAAATGC+AGG | - | chr2_1:12438172-12438191 | None:intergenic | 45.0% | |
| ! | TGCATTTCCTTTTGCAGCAC+TGG | + | chr2_1:12438171-12438190 | Msa0195590:intron | 45.0% |
| ! | CACCTTTAAGAGATTGCAGC+TGG | + | chr2_1:12438544-12438563 | Msa0195590:CDS | 45.0% |
| TGCCAGCTGCAATCTCTTAA+AGG | - | chr2_1:12438549-12438568 | None:intergenic | 45.0% | |
| CTGATATCTTCAGCTTGGGA+TGG | + | chr2_1:12438585-12438604 | Msa0195590:CDS | 45.0% | |
| CTTGGGATGGTGACATTGTT+AGG | + | chr2_1:12438598-12438617 | Msa0195590:CDS | 45.0% | |
| GGATGGTGACATTGTTAGGT+GGG | + | chr2_1:12438602-12438621 | Msa0195590:CDS | 45.0% | |
| AGGTGGGAATTTCCTGGAAA+TGG | + | chr2_1:12438618-12438637 | Msa0195590:CDS | 45.0% | |
| GTGGATCTTCTATTTGGAGG+AGG | - | chr2_1:12438657-12438676 | None:intergenic | 45.0% | |
| CCAGTGGATCTTCTATTTGG+AGG | - | chr2_1:12438660-12438679 | None:intergenic | 45.0% | |
| CCTCCAAATAGAAGATCCAC+TGG | + | chr2_1:12438657-12438676 | Msa0195590:CDS | 45.0% | |
| TCCACTGGAGTTCGTATTAG+AGG | + | chr2_1:12438672-12438691 | Msa0195590:CDS | 45.0% | |
| ACCTCTAATACGAACTCCAG+TGG | - | chr2_1:12438676-12438695 | None:intergenic | 45.0% | |
| AAGGGGGGTTTAGAGGATTG+AGG | - | chr2_1:12433671-12433690 | None:intergenic | 50.0% | |
| GGAAGTGGAATGGATGGAGA+AGG | + | chr2_1:12434192-12434211 | Msa0195590:CDS | 50.0% | |
| ! | GAGTCGTGTTGTTCCTGGTA+CGG | + | chr2_1:12434281-12434300 | Msa0195590:CDS | 50.0% |
| ! | AGTCGTGTTGTTCCTGGTAC+GGG | + | chr2_1:12434282-12434301 | Msa0195590:CDS | 50.0% |
| ! | AGGATGTTGGTAGGCAGAGA+AGG | + | chr2_1:12434327-12434346 | Msa0195590:CDS | 50.0% |
| AGCCGCTATTTGCCTACCAA+AGG | + | chr2_1:12434402-12434421 | Msa0195590:CDS | 50.0% | |
| TCCTTGGATTGTCGATCGCA+TGG | + | chr2_1:12434425-12434444 | Msa0195590:CDS | 50.0% | |
| CCTTGGATTGTCGATCGCAT+GGG | + | chr2_1:12434426-12434445 | Msa0195590:CDS | 50.0% | |
| !! | GTTGGTGTTGTGTTGGACAC+CGG | + | chr2_1:12434650-12434669 | Msa0195590:intron | 50.0% |
| ACACCGGACACACCCTTAAT+CGG | + | chr2_1:12434666-12434685 | Msa0195590:intron | 50.0% | |
| ! | CTTCCGATTAAGGGTGTGTC+CGG | - | chr2_1:12434672-12434691 | None:intergenic | 50.0% |
| AGCACAAACAACCGCGAGTA+AGG | - | chr2_1:12434817-12434836 | None:intergenic | 50.0% | |
| CTGGCAAATGCCACCTCATA+TGG | - | chr2_1:12434991-12435010 | None:intergenic | 50.0% | |
| GTGGCATTTGCCAGCTTTCT+AGG | + | chr2_1:12434997-12435016 | Msa0195590:intron | 50.0% | |
| TCACGAGCCATGGTCAGAAT+TGG | - | chr2_1:12435048-12435067 | None:intergenic | 50.0% | |
| CTGCAAGAAGGATGCATAGG+GGG | + | chr2_1:12435586-12435605 | Msa0195590:intron | 50.0% | |
| ! | AGGCGTTGCTTTGCTGCAAA+AGG | + | chr2_1:12436875-12436894 | Msa0195590:CDS | 50.0% |
| ACAACCAGCTGGCATCTTGA+TGG | + | chr2_1:12436898-12436917 | Msa0195590:CDS | 50.0% | |
| CAACCAGCTGGCATCTTGAT+GGG | + | chr2_1:12436899-12436918 | Msa0195590:CDS | 50.0% | |
| AACCAGCTGGCATCTTGATG+GGG | + | chr2_1:12436900-12436919 | Msa0195590:CDS | 50.0% | |
| TAAACCTACAGTCTGGGCCT+TGG | + | chr2_1:12437129-12437148 | Msa0195590:intron | 50.0% | |
| ! | TGTTGCCAATGACTGGTCCT+GGG | - | chr2_1:12437217-12437236 | None:intergenic | 50.0% |
| ! | ATGTTGCCAATGACTGGTCC+TGG | - | chr2_1:12437218-12437237 | None:intergenic | 50.0% |
| CCGAACTAGAGTACGCAACA+CGG | - | chr2_1:12437253-12437272 | None:intergenic | 50.0% | |
| CCGTGTTGCGTACTCTAGTT+CGG | + | chr2_1:12437250-12437269 | Msa0195590:CDS | 50.0% | |
| CTTAGTAGCTAGGAGTTGGG+TGG | + | chr2_1:12437489-12437508 | Msa0195590:intron | 50.0% | |
| ! | TCCAAGTCTCCGTGTGCTTT+TGG | + | chr2_1:12437879-12437898 | Msa0195590:intron | 50.0% |
| ! | TCCAAAAGCACACGGAGACT+TGG | - | chr2_1:12437883-12437902 | None:intergenic | 50.0% |
| GGGATGGTGACATTGTTAGG+TGG | + | chr2_1:12438601-12438620 | Msa0195590:CDS | 50.0% | |
| CTTCTATTTGGAGGAGGAGC+AGG | - | chr2_1:12438651-12438670 | None:intergenic | 50.0% | |
| ! | GTCGTGTTGTTCCTGGTACG+GGG | + | chr2_1:12434283-12434302 | Msa0195590:CDS | 55.0% |
| GCAGGTAATTTCCCCGTACC+AGG | - | chr2_1:12434297-12434316 | None:intergenic | 55.0% | |
| CCCATGCGATCGACAATCCA+AGG | - | chr2_1:12434429-12434448 | None:intergenic | 55.0% | |
| CCAGGTGAGCAGGAATTCTG+AGG | - | chr2_1:12436148-12436167 | None:intergenic | 55.0% | |
| CCTCAGAATTCCTGCTCACC+TGG | + | chr2_1:12436145-12436164 | Msa0195590:CDS | 55.0% | |
| GACCTGTACAGGTGTGGGAT+AGG | + | chr2_1:12436855-12436874 | Msa0195590:intron | 55.0% | |
| GCTGCAAAAGGACAACCAGC+TGG | + | chr2_1:12436887-12436906 | Msa0195590:CDS | 55.0% | |
| ! | GTTGCCAATGACTGGTCCTG+GGG | - | chr2_1:12437216-12437235 | None:intergenic | 55.0% |
| CTAGAGTACGCAACACGGAG+TGG | - | chr2_1:12437248-12437267 | None:intergenic | 55.0% | |
| GCAGGAGGTTGACCATTTCC+AGG | - | chr2_1:12438633-12438652 | None:intergenic | 55.0% | |
| CTATTTGGAGGAGGAGCAGG+AGG | - | chr2_1:12438648-12438667 | None:intergenic | 55.0% | |
| GGATGCATAGGGGGAGAGCA+AGG | + | chr2_1:12435595-12435614 | Msa0195590:intron | 60.0% | |
| GATGGGCGAGAGCTTGTGTC+TGG | + | chr2_1:12436071-12436090 | Msa0195590:CDS | 60.0% | |
| CGCCTATCCCACACCTGTAC+AGG | - | chr2_1:12436860-12436879 | None:intergenic | 60.0% | |
| TGCCCCATCAAGATGCCAGC+TGG | - | chr2_1:12436905-12436924 | None:intergenic | 60.0% | |
| GTCTCCAAGGCCCAGACTGT+AGG | - | chr2_1:12437136-12437155 | None:intergenic | 60.0% | |
| AGTCCCACTCGTCGTCTCCA+AGG | - | chr2_1:12437149-12437168 | None:intergenic | 60.0% | |
| GAGACGACGAGTGGGACTAC+CGG | + | chr2_1:12437151-12437170 | Msa0195590:CDS | 60.0% | |
| GCATCCCCAGGACCAGTCAT+TGG | + | chr2_1:12437209-12437228 | Msa0195590:CDS | 60.0% | |
| TGGGCCTTGGAGACGACGAG+TGG | + | chr2_1:12437142-12437161 | Msa0195590:CDS | 65.0% | |
| GGGCCTTGGAGACGACGAGT+GGG | + | chr2_1:12437143-12437162 | Msa0195590:CDS | 65.0% | |
| ACGACGAGTGGGACTACCGG+TGG | + | chr2_1:12437154-12437173 | Msa0195590:CDS | 65.0% | |
| CGAGTGGGACTACCGGTGGA+TGG | + | chr2_1:12437158-12437177 | Msa0195590:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 12433498 | 12438937 | 12433498 | ID=Msa0195590;Name=Msa0195590 |
| chr2_1 | mRNA | 12433498 | 12438937 | 12433498 | ID=Msa0195590-mRNA-1;Parent=Msa0195590;Name=Msa0195590-mRNA-1;_AED=0.05;_eAED=0.05;_QI=184|1|1|1|0.88|0.8|10|227|475 |
| chr2_1 | exon | 12433498 | 12433659 | 12433498 | ID=Msa0195590-mRNA-1:exon:5398;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12434110 | 12434509 | 12434110 | ID=Msa0195590-mRNA-1:exon:5399;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12434850 | 12434969 | 12434850 | ID=Msa0195590-mRNA-1:exon:5400;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12435150 | 12435227 | 12435150 | ID=Msa0195590-mRNA-1:exon:5401;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12435993 | 12436166 | 12435993 | ID=Msa0195590-mRNA-1:exon:5402;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12436560 | 12436637 | 12436560 | ID=Msa0195590-mRNA-1:exon:5403;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12436866 | 12437041 | 12436866 | ID=Msa0195590-mRNA-1:exon:5404;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12437140 | 12437295 | 12437140 | ID=Msa0195590-mRNA-1:exon:5405;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12438188 | 12438248 | 12438188 | ID=Msa0195590-mRNA-1:exon:5406;Parent=Msa0195590-mRNA-1 |
| chr2_1 | exon | 12438504 | 12438937 | 12438504 | ID=Msa0195590-mRNA-1:exon:5407;Parent=Msa0195590-mRNA-1 |
| chr2_1 | five_prime_UTR | 12433498 | 12433659 | 12433498 | ID=Msa0195590-mRNA-1:five_prime_utr;Parent=Msa0195590-mRNA-1 |
| chr2_1 | five_prime_UTR | 12434110 | 12434131 | 12434110 | ID=Msa0195590-mRNA-1:five_prime_utr;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12434132 | 12434509 | 12434132 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12434850 | 12434969 | 12434850 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12435150 | 12435227 | 12435150 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12435993 | 12436166 | 12435993 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12436560 | 12436637 | 12436560 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12436866 | 12437041 | 12436866 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12437140 | 12437295 | 12437140 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12438188 | 12438248 | 12438188 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | CDS | 12438504 | 12438710 | 12438504 | ID=Msa0195590-mRNA-1:cds;Parent=Msa0195590-mRNA-1 |
| chr2_1 | three_prime_UTR | 12438711 | 12438937 | 12438711 | ID=Msa0195590-mRNA-1:three_prime_utr;Parent=Msa0195590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
