Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277490 | AES64296.1 | 98.947 | 475 | 5 | 0 | 1 | 475 | 1 | 475 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277490 | sp|O24467|LE14B_PRUAR | 69.584 | 457 | 134 | 3 | 3 | 457 | 9 | 462 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277490 | G7IFM1 | 98.947 | 475 | 5 | 0 | 1 | 475 | 1 | 475 | 0.0 | 976 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142550 | Msa0277490 | 0.889342 | 2.640396e-73 | -8.615850e-47 |
| Msa0195590 | Msa0277490 | 0.949342 | 1.544711e-107 | -8.615850e-47 |
| Msa0277490 | Msa0428330 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0277490 | Msa1161210 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277490 | MtrunA17_Chr2g0286731 | 98.726 | 471 | 6 | 0 | 1 | 471 | 1 | 471 | 0.0 | 967 |
| Msa0277490 | MtrunA17_Chr1g0196321 | 68.000 | 450 | 140 | 2 | 18 | 463 | 35 | 484 | 0.0 | 644 |
| Msa0277490 | MtrunA17_Chr7g0253861 | 24.818 | 274 | 134 | 5 | 210 | 444 | 100 | 340 | 2.91e-18 | 85.9 |
| Msa0277490 | MtrunA17_Chr4g0067151 | 26.613 | 248 | 160 | 6 | 208 | 443 | 78 | 315 | 3.24e-16 | 79.7 |
| Msa0277490 | MtrunA17_Chr3g0093681 | 32.540 | 126 | 81 | 1 | 211 | 336 | 443 | 564 | 2.64e-14 | 75.1 |
| Msa0277490 | MtrunA17_Chr1g0172501 | 32.540 | 126 | 81 | 1 | 211 | 336 | 443 | 564 | 8.10e-14 | 73.6 |
| Msa0277490 | MtrunA17_Chr1g0185501 | 25.301 | 249 | 158 | 7 | 210 | 443 | 71 | 306 | 1.17e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277490 | AT4G03020.1 | 71.300 | 446 | 121 | 3 | 32 | 474 | 52 | 493 | 0.0 | 666 |
| Msa0277490 | AT4G03020.2 | 71.300 | 446 | 121 | 3 | 32 | 474 | 52 | 493 | 0.0 | 666 |
| Msa0277490 | AT4G03020.3 | 71.300 | 446 | 121 | 3 | 32 | 474 | 52 | 493 | 0.0 | 666 |
| Msa0277490 | AT2G43770.1 | 25.912 | 274 | 131 | 6 | 210 | 444 | 98 | 338 | 8.23e-20 | 90.9 |
Find 128 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAATTTCTTGCATATTT+AGG | 0.104439 | 2_3:+10075819 | None:intergenic |
| GATAATGATAATGATGAATT+TGG | 0.159616 | 2_3:-10076981 | Msa0277490:CDS |
| AATTGTCCACCGTAAGTTTC+TGG | 0.182078 | 2_3:+10078093 | None:intergenic |
| CTAAATATGCAAGAAATTTA+AGG | 0.217256 | 2_3:-10075818 | Msa0277490:CDS |
| GTGTGTGATGAATGAATTTA+AGG | 0.241607 | 2_3:+10079452 | None:intergenic |
| ACTCCAGTGGATCTTCTATT+TGG | 0.244163 | 2_3:+10074345 | None:intergenic |
| GGCCGTTATTTAATTTCTAA+TGG | 0.258615 | 2_3:-10076042 | Msa0277490:CDS |
| CTCTCCGGATACATATATTT+AGG | 0.300424 | 2_3:-10074275 | Msa0277490:three_prime_UTR |
| CCGATCCTGCATTGACAATA+TGG | 0.301448 | 2_3:+10077828 | None:intergenic |
| AAATAAGTGTAACAAACTTT+TGG | 0.307033 | 2_3:+10074182 | None:intergenic |
| TGCCAGCTGCAATCTCTTAA+AGG | 0.307367 | 2_3:+10074459 | None:intergenic |
| CTTGGGATGGTGACATTGTT+AGG | 0.316849 | 2_3:-10074407 | Msa0277490:CDS |
| TGTCCCATAGCTTGGTAGTT+TGG | 0.319852 | 2_3:+10076013 | None:intergenic |
| TCCACTGGAGTTCGTATTAG+AGG | 0.324570 | 2_3:-10074333 | Msa0277490:CDS |
| GCATTGACAATATGGATAAT+TGG | 0.329443 | 2_3:+10077836 | None:intergenic |
| TTAATCTAAGAATTTATGAT+AGG | 0.369737 | 2_3:+10074132 | None:intergenic |
| AACACAACACTCACAGTTGA+TGG | 0.372300 | 2_3:-10079422 | Msa0277490:five_prime_UTR |
| ATTGTTAGGTGGGAATTTCC+TGG | 0.376216 | 2_3:-10074393 | Msa0277490:CDS |
| TCTGGTCATCTCATATATTC+TGG | 0.377793 | 2_3:-10076411 | Msa0277490:CDS |
| AGTCGTGTTGTTCCTGGTAC+GGG | 0.382420 | 2_3:-10078722 | Msa0277490:CDS |
| ATCTTGATGGGGCATTTAGA+AGG | 0.389360 | 2_3:-10076093 | Msa0277490:CDS |
| AGGTGGGAATTTCCTGGAAA+TGG | 0.393643 | 2_3:-10074387 | Msa0277490:CDS |
| GTTATTTCTCACCATCATAT+AGG | 0.399373 | 2_3:-10075731 | Msa0277490:intron |
| GCAGGAGGTTGACCATTTCC+AGG | 0.414172 | 2_3:+10074375 | None:intergenic |
| CTACCAAGCTATGGGACATA+AGG | 0.419416 | 2_3:-10076008 | Msa0277490:CDS |
| GTCTGCTTTGCTGATGAATC+TGG | 0.420608 | 2_3:-10076429 | Msa0277490:CDS |
| TCAATATGTGTATATGATCT+TGG | 0.429420 | 2_3:-10076897 | Msa0277490:CDS |
| CTTCTATTTGGAGGAGGAGC+AGG | 0.433878 | 2_3:+10074357 | None:intergenic |
| ATAATGATAATGATGAATTT+GGG | 0.436292 | 2_3:-10076980 | Msa0277490:CDS |
| ACAACCAGCTGGCATCTTGA+TGG | 0.437455 | 2_3:-10076106 | Msa0277490:CDS |
| TAAACCTACAGTCTGGGCCT+TGG | 0.442950 | 2_3:-10075876 | Msa0277490:intron |
| TTCTCTTACACCAATAGAAA+AGG | 0.444191 | 2_3:-10074207 | Msa0277490:three_prime_UTR |
| AATTTGAGTCGTGTTGTTCC+TGG | 0.446775 | 2_3:-10078728 | Msa0277490:CDS |
| CTTACAAGATATTGTCGATC+AGG | 0.447419 | 2_3:+10078052 | None:intergenic |
| ATCGACAATCCAAGGACCTT+TGG | 0.448041 | 2_3:+10078586 | None:intergenic |
| GATATCAGCATTGGATAGAA+AGG | 0.448504 | 2_3:+10074435 | None:intergenic |
| TTCCATTAGAAATTAAATAA+CGG | 0.450455 | 2_3:+10076040 | None:intergenic |
| CCTCAGAATTCCTGCTCACC+TGG | 0.452156 | 2_3:-10076859 | Msa0277490:intron |
| GATGGGCGAGAGCTTGTGTC+TGG | 0.453921 | 2_3:-10076933 | Msa0277490:CDS |
| TTTGTACATATTTATCTCTC+CGG | 0.454546 | 2_3:-10074290 | Msa0277490:three_prime_UTR |
| ATTGAAACAGTGTTTGATGA+TGG | 0.457017 | 2_3:+10079482 | None:intergenic |
| GAGTCGTGTTGTTCCTGGTA+CGG | 0.457305 | 2_3:-10078723 | Msa0277490:CDS |
| ATTTGCCTACCAAAGGTCCT+TGG | 0.457941 | 2_3:-10078595 | Msa0277490:CDS |
| TTCATTAATAGTCGCGGGGA+TGG | 0.461834 | 2_3:-10076063 | Msa0277490:CDS |
| AGGCGTTGCTTTGCTGCAAA+AGG | 0.464029 | 2_3:-10076129 | Msa0277490:CDS |
| GCTACCTAAATATATGTATC+CGG | 0.471557 | 2_3:+10074271 | None:intergenic |
| CAACCAGCTGGCATCTTGAT+GGG | 0.472797 | 2_3:-10076105 | Msa0277490:CDS |
| ATGTTGCCAATGACTGGTCC+TGG | 0.479160 | 2_3:+10075790 | None:intergenic |
| CTTCCTTATGTCCCATAGCT+TGG | 0.483959 | 2_3:+10076005 | None:intergenic |
| GCATCCCCAGGACCAGTCAT+TGG | 0.489591 | 2_3:-10075796 | Msa0277490:CDS |
| TCGCTTCATTCTCCAATCAC+AGG | 0.490272 | 2_3:-10079366 | Msa0277490:intron |
| TATATGATGTTGACAAGGAC+TGG | 0.492556 | 2_3:-10078138 | Msa0277490:CDS |
| CAATGCTGATATCTTCAGCT+TGG | 0.492574 | 2_3:-10074425 | Msa0277490:CDS |
| CACCTTTAAGAGATTGCAGC+TGG | 0.492653 | 2_3:-10074461 | Msa0277490:CDS |
| CCAGTGGATCTTCTATTTGG+AGG | 0.494643 | 2_3:+10074348 | None:intergenic |
| CAGTCATTGGCAACATATCA+AGG | 0.494910 | 2_3:-10075783 | Msa0277490:CDS |
| CTTGATATGTTGCCAATGAC+TGG | 0.495230 | 2_3:+10075784 | None:intergenic |
| TTACATTCATTAATAGTCGC+GGG | 0.500203 | 2_3:-10076068 | Msa0277490:CDS |
| ATATGTAATACCAGGTGAGC+AGG | 0.501569 | 2_3:+10076849 | None:intergenic |
| AATTACCTGCATCAACTGTA+AGG | 0.508475 | 2_3:-10078697 | Msa0277490:CDS |
| GCAGGTAATTTCCCCGTACC+AGG | 0.509277 | 2_3:+10078710 | None:intergenic |
| TGAGGAATGAAACCTGTGAT+TGG | 0.511697 | 2_3:+10079354 | None:intergenic |
| TCCTTGGATTGTCGATCGCA+TGG | 0.513756 | 2_3:-10078579 | Msa0277490:CDS |
| ATTATCCATATTGTCAATGC+AGG | 0.514577 | 2_3:-10077833 | Msa0277490:CDS |
| CCGTGTTGCGTACTCTAGTT+CGG | 0.518140 | 2_3:-10075755 | Msa0277490:CDS |
| AGTAATGAATCTAGTGGAAG+TGG | 0.525470 | 2_3:-10078827 | Msa0277490:CDS |
| AATACAAGTTACCTATATGA+TGG | 0.526315 | 2_3:+10075720 | None:intergenic |
| CAAGCTGAAGATATCAGCAT+TGG | 0.526318 | 2_3:+10074426 | None:intergenic |
| ACATCTCTGCCAGAAACTTA+CGG | 0.527267 | 2_3:-10078102 | Msa0277490:CDS |
| AGGATGTTGGTAGGCAGAGA+AGG | 0.527556 | 2_3:-10078677 | Msa0277490:CDS |
| TCACATTCTTTGTAGGTGAG+TGG | 0.527712 | 2_3:-10074516 | Msa0277490:intron |
| AATGCTGATATCTTCAGCTT+GGG | 0.530130 | 2_3:-10074424 | Msa0277490:CDS |
| GGAAGTGGAATGGATGGAGA+AGG | 0.532430 | 2_3:-10078812 | Msa0277490:CDS |
| AAGACCAAACTACCAAGCTA+TGG | 0.533647 | 2_3:-10076017 | Msa0277490:CDS |
| TGCCCCATCAAGATGCCAGC+TGG | 0.534261 | 2_3:+10076102 | None:intergenic |
| GACCTGTACAGGTGTGGGAT+AGG | 0.535063 | 2_3:-10076149 | Msa0277490:intron |
| AGTCCCACTCGTCGTCTCCA+AGG | 0.538717 | 2_3:+10075859 | None:intergenic |
| TCTAGTGGAAGTGGAATGGA+TGG | 0.542029 | 2_3:-10078818 | Msa0277490:CDS |
| CTCTGTCTATATATATGACC+TGG | 0.550941 | 2_3:-10074778 | Msa0277490:intron |
| TGAATCTAGTGGAAGTGGAA+TGG | 0.552690 | 2_3:-10078822 | Msa0277490:CDS |
| GGATGGTGACATTGTTAGGT+GGG | 0.553199 | 2_3:-10074403 | Msa0277490:CDS |
| GCTGCAAAAGGACAACCAGC+TGG | 0.555581 | 2_3:-10076117 | Msa0277490:CDS |
| TTGCACAGATCACAAAGCTC+AGG | 0.559290 | 2_3:-10078766 | Msa0277490:CDS |
| GTGGATCTTCTATTTGGAGG+AGG | 0.561933 | 2_3:+10074351 | None:intergenic |
| CCTCCAAATAGAAGATCCAC+TGG | 0.564277 | 2_3:-10074348 | Msa0277490:CDS |
| AACATCCTTACAGTTGATGC+AGG | 0.566179 | 2_3:+10078692 | None:intergenic |
| TGTTGCCAATGACTGGTCCT+GGG | 0.567625 | 2_3:+10075791 | None:intergenic |
| CAACATCATATATTCTGATG+TGG | 0.571580 | 2_3:+10078149 | None:intergenic |
| CTATTTGGAGGAGGAGCAGG+AGG | 0.573524 | 2_3:+10074360 | None:intergenic |
| ATTACATTCATTAATAGTCG+CGG | 0.577184 | 2_3:-10076069 | Msa0277490:CDS |
| TGCATCAACTGTAAGGATGT+TGG | 0.585388 | 2_3:-10078690 | Msa0277490:CDS |
| GGGATGGTGACATTGTTAGG+TGG | 0.586134 | 2_3:-10074404 | Msa0277490:CDS |
| TGGGCCTTGGAGACGACGAG+TGG | 0.586629 | 2_3:-10075863 | Msa0277490:CDS |
| CCCATGCGATCGACAATCCA+AGG | 0.588179 | 2_3:+10078578 | None:intergenic |
| AGACCAAACTACCAAGCTAT+GGG | 0.590086 | 2_3:-10076016 | Msa0277490:CDS |
| AAGAAATTTAAGGCATCCCC+AGG | 0.593421 | 2_3:-10075808 | Msa0277490:CDS |
| CCTTGGATTGTCGATCGCAT+GGG | 0.593733 | 2_3:-10078578 | Msa0277490:CDS |
| CCATATTGTCAATGCAGGAT+CGG | 0.598464 | 2_3:-10077828 | Msa0277490:CDS |
| ATTTACACTGGATCTAGTGA+TGG | 0.599754 | 2_3:-10074801 | Msa0277490:CDS |
| AGCCGCTATTTGCCTACCAA+AGG | 0.600990 | 2_3:-10078602 | Msa0277490:CDS |
| CGAGTGGGACTACCGGTGGA+TGG | 0.601037 | 2_3:-10075847 | Msa0277490:CDS |
| AACCAGCTGGCATCTTGATG+GGG | 0.601649 | 2_3:-10076104 | Msa0277490:CDS |
| GAGACGACGAGTGGGACTAC+CGG | 0.610203 | 2_3:-10075854 | Msa0277490:CDS |
| GGGCCTTGGAGACGACGAGT+GGG | 0.610369 | 2_3:-10075862 | Msa0277490:CDS |
| GTCGTGTTGTTCCTGGTACG+GGG | 0.611745 | 2_3:-10078721 | Msa0277490:CDS |
| GGCAGCAGTAATGAATCTAG+TGG | 0.613796 | 2_3:-10078833 | Msa0277490:CDS |
| TACATTCATTAATAGTCGCG+GGG | 0.623189 | 2_3:-10076067 | Msa0277490:CDS |
| ATTTAGGATAGTCCATCCAC+CGG | 0.623304 | 2_3:+10075835 | None:intergenic |
| CTGATATCTTCAGCTTGGGA+TGG | 0.627405 | 2_3:-10074420 | Msa0277490:CDS |
| CCGAACTAGAGTACGCAACA+CGG | 0.627548 | 2_3:+10075755 | None:intergenic |
| CCAGGTGAGCAGGAATTCTG+AGG | 0.628041 | 2_3:+10076859 | None:intergenic |
| GACCTTTGGTAGGCAAATAG+CGG | 0.632536 | 2_3:+10078600 | None:intergenic |
| ACAATCCAAGGACCTTTGGT+AGG | 0.633625 | 2_3:+10078590 | None:intergenic |
| GACTGTATGAATGATGGTAG+TGG | 0.634830 | 2_3:-10078854 | Msa0277490:CDS |
| ACAAGTGACTGTATGAATGA+TGG | 0.636150 | 2_3:-10078860 | Msa0277490:CDS |
| ACCTCTAATACGAACTCCAG+TGG | 0.636276 | 2_3:+10074332 | None:intergenic |
| TCAACTGTAAGGATGTTGGT+AGG | 0.641616 | 2_3:-10078686 | Msa0277490:CDS |
| CTAGAGTACGCAACACGGAG+TGG | 0.643743 | 2_3:+10075760 | None:intergenic |
| CAGAATATATGATGTTGACA+AGG | 0.644861 | 2_3:-10078143 | Msa0277490:CDS |
| ACACGACTCAAATTCTCATG+TGG | 0.650713 | 2_3:+10078737 | None:intergenic |
| AAGTGATGATAGTTTCTGCA+AGG | 0.652431 | 2_3:-10076388 | Msa0277490:intron |
| AGATTCATCAGCAAAGCAGA+CGG | 0.654512 | 2_3:+10076431 | None:intergenic |
| ACGACGAGTGGGACTACCGG+TGG | 0.666395 | 2_3:-10075851 | Msa0277490:CDS |
| GTTGCCAATGACTGGTCCTG+GGG | 0.667116 | 2_3:+10075792 | None:intergenic |
| TGATGAATGAATTTAAGGAA+AGG | 0.692997 | 2_3:+10079457 | None:intergenic |
| TCATTGCAGGAAGTTCACGA+TGG | 0.705664 | 2_3:-10077020 | Msa0277490:intron |
| GATTGGAGAATGAAGCGATG+AGG | 0.760652 | 2_3:+10079371 | None:intergenic |
| TCTCTGCCAGAAACTTACGG+TGG | 0.772244 | 2_3:-10078099 | Msa0277490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTATTTTTTTACATTT+AGG | - | chr2_3:10074539-10074558 | Msa0277490:intron | 10.0% |
| !!! | ATGCATATATAATTTTTAAA+AGG | + | chr2_3:10076236-10076255 | None:intergenic | 10.0% |
| !!! | ACATATTATTTTCTTATAAT+TGG | - | chr2_3:10076764-10076783 | Msa0277490:intron | 10.0% |
| !!! | ATTAAGAACTTTTTTTTTTT+TGG | + | chr2_3:10078979-10078998 | None:intergenic | 10.0% |
| !!! | TTTTGATTGATATAAGAAAA+GGG | + | chr2_3:10074416-10074435 | None:intergenic | 15.0% |
| !!! | ATTTTGATTGATATAAGAAA+AGG | + | chr2_3:10074417-10074436 | None:intergenic | 15.0% |
| !! | ATATCAATCAAAATTTAACT+TGG | - | chr2_3:10074423-10074442 | Msa0277490:CDS | 15.0% |
| !!! | TATCAATCAAAATTTAACTT+GGG | - | chr2_3:10074424-10074443 | Msa0277490:CDS | 15.0% |
| !!! | TATTTCTGAAACTATAATTA+TGG | - | chr2_3:10075331-10075350 | Msa0277490:intron | 15.0% |
| !!! | ATTTCTGAAACTATAATTAT+GGG | - | chr2_3:10075332-10075351 | Msa0277490:intron | 15.0% |
| !!! | TTGGATTAAATTGATAATAA+CGG | + | chr2_3:10076317-10076336 | None:intergenic | 15.0% |
| !!! | ATAATGATAATGATGAATTT+GGG | - | chr2_3:10076616-10076635 | Msa0277490:intron | 15.0% |
| !!! | TGATATTATTTTCCTATAAT+TGG | - | chr2_3:10076829-10076848 | Msa0277490:intron | 15.0% |
| !! | TATTTCTTTATATGTTAGTA+TGG | - | chr2_3:10077087-10077106 | Msa0277490:intron | 15.0% |
| !! | TTCCATTAGAAATTAAATAA+CGG | + | chr2_3:10077559-10077578 | None:intergenic | 15.0% |
| !! | TACAGATTTATTCTAATAAA+TGG | - | chr2_3:10077671-10077690 | Msa0277490:intron | 15.0% |
| !!! | TTATTGATGTTATATCATTT+TGG | - | chr2_3:10078535-10078554 | Msa0277490:CDS | 15.0% |
| !!! | TTATTTTTCAATCGAATTTT+GGG | + | chr2_3:10078571-10078590 | None:intergenic | 15.0% |
| !!! | ATTATTTTTCAATCGAATTT+TGG | + | chr2_3:10078572-10078591 | None:intergenic | 15.0% |
| !!! | ACTAAATCCATTTTTAAAAT+TGG | - | chr2_3:10079032-10079051 | Msa0277490:intron | 15.0% |
| !!! | TGTTAAACCAATTTTAAAAA+TGG | + | chr2_3:10079042-10079061 | None:intergenic | 15.0% |
| !! | TTAATCTAAGAATTTATGAT+AGG | + | chr2_3:10079467-10079486 | None:intergenic | 15.0% |
| !! | ATTAAAGAGAAAATGAATGT+GGG | + | chr2_3:10074326-10074345 | None:intergenic | 20.0% |
| !! | AATTAAAGAGAAAATGAATG+TGG | + | chr2_3:10074327-10074346 | None:intergenic | 20.0% |
| !!! | TTAGTTCTACAAATGAAATT+AGG | + | chr2_3:10074494-10074513 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTTACATTTAGG+TGG | - | chr2_3:10074542-10074561 | Msa0277490:intron | 20.0% |
| !!! | GATAGAATTTTATCATAGTT+TGG | - | chr2_3:10074611-10074630 | Msa0277490:intron | 20.0% |
| !! | TTTAAGAATTCCTTTATCTA+AGG | - | chr2_3:10074651-10074670 | Msa0277490:intron | 20.0% |
| !! | TTAAGAATTCCTTTATCTAA+GGG | - | chr2_3:10074652-10074671 | Msa0277490:intron | 20.0% |
| !!! | TCCATTTTTCAAAATACTAT+CGG | + | chr2_3:10075199-10075218 | None:intergenic | 20.0% |
| !! | GTCATATGAATGATTTATAA+TGG | - | chr2_3:10075953-10075972 | Msa0277490:intron | 20.0% |
| !! | TTTAAAAGGAAAATGACAAA+GGG | + | chr2_3:10076222-10076241 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGGAAAATGACAA+AGG | + | chr2_3:10076223-10076242 | None:intergenic | 20.0% |
| !!! | GATAATGATAATGATGAATT+TGG | - | chr2_3:10076615-10076634 | Msa0277490:intron | 20.0% |
| !!! | TTTCTCTATCAAATTTTCAA+CGG | - | chr2_3:10076641-10076660 | Msa0277490:intron | 20.0% |
| !! | AGAAAATAATATGTAATACC+AGG | + | chr2_3:10076758-10076777 | None:intergenic | 20.0% |
| !!! | AAAGAAATTAAGTAGCTTTA+AGG | + | chr2_3:10077061-10077080 | None:intergenic | 20.0% |
| !!! | TTACTTTCATTTCATTGATT+TGG | - | chr2_3:10077386-10077405 | Msa0277490:intron | 20.0% |
| !! | CAAAAAAAAATCTTACTTCA+TGG | + | chr2_3:10077630-10077649 | None:intergenic | 20.0% |
| !! | CTTAAATTTCTTGCATATTT+AGG | + | chr2_3:10077780-10077799 | None:intergenic | 20.0% |
| !! | CTAAATATGCAAGAAATTTA+AGG | - | chr2_3:10077778-10077797 | Msa0277490:intron | 20.0% |
| !!! | ATATAGGTAACTTGTATTTT+TGG | - | chr2_3:10077881-10077900 | Msa0277490:intron | 20.0% |
| !! | TCTGAATTTCCAAAATATTT+AGG | - | chr2_3:10077951-10077970 | Msa0277490:intron | 20.0% |
| !!! | AGTTCAAAACCTAAATATTT+TGG | + | chr2_3:10077963-10077982 | None:intergenic | 20.0% |
| !! | TTTGTTTATAATATCACTCA+AGG | - | chr2_3:10078166-10078185 | Msa0277490:intron | 20.0% |
| !! | AAATCAAAAGAGAAAAGAAA+AGG | + | chr2_3:10078285-10078304 | None:intergenic | 20.0% |
| !!! | AACGATAACAATTTTTTTCT+TGG | - | chr2_3:10078408-10078427 | Msa0277490:intron | 20.0% |
| !! | TCAACTAAAACATTAATTCA+CGG | + | chr2_3:10078638-10078657 | None:intergenic | 20.0% |
| !!! | AAATAAGTGTAACAAACTTT+TGG | + | chr2_3:10079417-10079436 | None:intergenic | 20.0% |
| ! | TGATGAATGAATTTAAGGAA+AGG | + | chr2_3:10074142-10074161 | None:intergenic | 25.0% |
| !! | CTTGGGAAAAAAAAAGTTTT+TGG | - | chr2_3:10074441-10074460 | Msa0277490:CDS | 25.0% |
| !! | TAGGTGGTAATTTTACATTT+AGG | - | chr2_3:10074558-10074577 | Msa0277490:intron | 25.0% |
| ! | TTTACATTTAGGTGGTAATT+TGG | - | chr2_3:10074550-10074569 | Msa0277490:intron | 25.0% |
| ! | TTACATTTAGGTGGTAATTT+GGG | - | chr2_3:10074551-10074570 | Msa0277490:intron | 25.0% |
| !! | TTGATATGATGCATTTTTGT+AGG | - | chr2_3:10074680-10074699 | Msa0277490:intron | 25.0% |
| ! | ATAAGTAACTACAATCAGAA+TGG | + | chr2_3:10075118-10075137 | None:intergenic | 25.0% |
| !!! | ACCGATAGTATTTTGAAAAA+TGG | - | chr2_3:10075195-10075214 | Msa0277490:intron | 25.0% |
| ! | TTTGTGCTTTGTATGAAAAA+GGG | - | chr2_3:10075421-10075440 | Msa0277490:intron | 25.0% |
| ! | GTCAAAATGCAAAGTTAAAA+GGG | + | chr2_3:10075699-10075718 | None:intergenic | 25.0% |
| ! | TGTCAAAATGCAAAGTTAAA+AGG | + | chr2_3:10075700-10075719 | None:intergenic | 25.0% |
| ! | AATTGTTAATTCATCATTGC+AGG | - | chr2_3:10075720-10075739 | Msa0277490:intron | 25.0% |
| ! | TAACAATATGAGAATTAGCT+GGG | + | chr2_3:10075885-10075904 | None:intergenic | 25.0% |
| ! | TTAACAATATGAGAATTAGC+TGG | + | chr2_3:10075886-10075905 | None:intergenic | 25.0% |
| ! | TGACAACTTATGAGTTTAAT+AGG | + | chr2_3:10076126-10076145 | None:intergenic | 25.0% |
| ! | TTAACTTTGACACCAAATAT+TGG | - | chr2_3:10076291-10076310 | Msa0277490:intron | 25.0% |
| ! | GTATTTATACATATGCGTAT+AGG | - | chr2_3:10076484-10076503 | Msa0277490:intron | 25.0% |
| ! | TCAATATGTGTATATGATCT+TGG | - | chr2_3:10076699-10076718 | Msa0277490:intron | 25.0% |
| ! | AAATCATTTCTAACAGTACA+TGG | + | chr2_3:10077007-10077026 | None:intergenic | 25.0% |
| ! | CTAATTTAAATCACCAACAA+TGG | + | chr2_3:10077325-10077344 | None:intergenic | 25.0% |
| ! | ATTACATTCATTAATAGTCG+CGG | - | chr2_3:10077527-10077546 | Msa0277490:intron | 25.0% |
| ! | TATTATTTAAACCTACAGTC+TGG | - | chr2_3:10077713-10077732 | Msa0277490:intron | 25.0% |
| ! | ATTATTTAAACCTACAGTCT+GGG | - | chr2_3:10077714-10077733 | Msa0277490:intron | 25.0% |
| ! | AATACAAGTTACCTATATGA+TGG | + | chr2_3:10077879-10077898 | None:intergenic | 25.0% |
| ! | ACATCAAAAATTTGAACCTA+CGG | + | chr2_3:10078118-10078137 | None:intergenic | 25.0% |
| !! | TTTTTGTGGTCATTTAAATC+TGG | + | chr2_3:10078377-10078396 | None:intergenic | 25.0% |
| ! | AAAAATTGTTATCGTTTCAG+AGG | + | chr2_3:10078404-10078423 | None:intergenic | 25.0% |
| ! | GATATAACATCAATAAAGCA+TGG | + | chr2_3:10078531-10078550 | None:intergenic | 25.0% |
| ! | AGGATTTATCAATTTCAACA+TGG | + | chr2_3:10078611-10078630 | None:intergenic | 25.0% |
| ! | CAACTAAAACATTAATTCAC+GGG | + | chr2_3:10078637-10078656 | None:intergenic | 25.0% |
| !! | ATTTAGTTTATGTACACTGT+TGG | + | chr2_3:10079019-10079038 | None:intergenic | 25.0% |
| ! | TTTAGATTCACATTCTTTGT+AGG | - | chr2_3:10079073-10079092 | Msa0277490:intron | 25.0% |
| ! | TTTGTACATATTTATCTCTC+CGG | - | chr2_3:10079306-10079325 | Msa0277490:intron | 25.0% |
| ! | TTACAAAGCTTACAAAAACA+AGG | + | chr2_3:10079443-10079462 | None:intergenic | 25.0% |
| ATTGAAACAGTGTTTGATGA+TGG | + | chr2_3:10074117-10074136 | None:intergenic | 30.0% | |
| GTGTGTGATGAATGAATTTA+AGG | + | chr2_3:10074147-10074166 | None:intergenic | 30.0% | |
| ATTCACCATCACTAAAACAA+GGG | + | chr2_3:10074281-10074300 | None:intergenic | 30.0% | |
| AATTCACCATCACTAAAACA+AGG | + | chr2_3:10074282-10074301 | None:intergenic | 30.0% | |
| GATTGATATAAGAAAAGGGT+CGG | + | chr2_3:10074412-10074431 | None:intergenic | 30.0% | |
| GAACTAATATTCATAGTGTG+AGG | - | chr2_3:10074507-10074526 | Msa0277490:intron | 30.0% | |
| ! | GTGGTAATTTTACATTTAGG+TGG | - | chr2_3:10074561-10074580 | Msa0277490:intron | 30.0% |
| TCAAAGAAACCCTTAGATAA+AGG | + | chr2_3:10074664-10074683 | None:intergenic | 30.0% | |
| !! | AAGGTAATTTTTCTGGAAGA+GGG | - | chr2_3:10074938-10074957 | Msa0277490:intron | 30.0% |
| ! | TCTTTTTATTGCTGGATTTC+AGG | - | chr2_3:10075080-10075099 | Msa0277490:intron | 30.0% |
| TTGAAAGTAACTACATGTGT+TGG | - | chr2_3:10075224-10075243 | Msa0277490:intron | 30.0% | |
| AACTATAATTATGGGACCAA+AGG | - | chr2_3:10075340-10075359 | Msa0277490:intron | 30.0% | |
| ACTATAATTATGGGACCAAA+GGG | - | chr2_3:10075341-10075360 | Msa0277490:intron | 30.0% | |
| GTTTGTGCTTTGTATGAAAA+AGG | - | chr2_3:10075420-10075439 | Msa0277490:intron | 30.0% | |
| CAACATCATATATTCTGATG+TGG | + | chr2_3:10075450-10075469 | None:intergenic | 30.0% | |
| CAGAATATATGATGTTGACA+AGG | - | chr2_3:10075453-10075472 | Msa0277490:intron | 30.0% | |
| !! | TTCAACTTGTTTTCCATATG+AGG | - | chr2_3:10075567-10075586 | Msa0277490:intron | 30.0% |
| ! | GCATTGACAATATGGATAAT+TGG | + | chr2_3:10075763-10075782 | None:intergenic | 30.0% |
| ATTATCCATATTGTCAATGC+AGG | - | chr2_3:10075763-10075782 | Msa0277490:CDS | 30.0% | |
| !! | CCTTAAATTTTATAGCCTTG+CGG | + | chr2_3:10076022-10076041 | None:intergenic | 30.0% |
| TGATAATAACGGCCAATATT+TGG | + | chr2_3:10076306-10076325 | None:intergenic | 30.0% | |
| AACTTAAGTGAATTATGGAG+AGG | + | chr2_3:10076342-10076361 | None:intergenic | 30.0% | |
| GTGAGAACTTAAGTGAATTA+TGG | + | chr2_3:10076347-10076366 | None:intergenic | 30.0% | |
| ATAGAACGTGTAATTGCTAA+GGG | + | chr2_3:10076388-10076407 | None:intergenic | 30.0% | |
| ATAAATCCTTCTTTCATTGC+AGG | - | chr2_3:10076563-10076582 | Msa0277490:intron | 30.0% | |
| ! | TCTATCAAATTTTCAACGGA+TGG | - | chr2_3:10076645-10076664 | Msa0277490:intron | 30.0% |
| ! | CTATCAAATTTTCAACGGAT+GGG | - | chr2_3:10076646-10076665 | Msa0277490:intron | 30.0% |
| ACAAATCAGCAACCAATTAT+AGG | + | chr2_3:10076844-10076863 | None:intergenic | 30.0% | |
| ACCTCAAACTTCTTACTAAT+GGG | + | chr2_3:10076924-10076943 | None:intergenic | 30.0% | |
| AACCTCAAACTTCTTACTAA+TGG | + | chr2_3:10076925-10076944 | None:intergenic | 30.0% | |
| ATCAGACTGCAACATAAAAA+AGG | + | chr2_3:10077138-10077157 | None:intergenic | 30.0% | |
| CGAAGTCTCAAATAGTTATA+AGG | + | chr2_3:10077243-10077262 | None:intergenic | 30.0% | |
| TTACATTCATTAATAGTCGC+GGG | - | chr2_3:10077528-10077547 | Msa0277490:intron | 30.0% | |
| ! | GGCCGTTATTTAATTTCTAA+TGG | - | chr2_3:10077554-10077573 | Msa0277490:intron | 30.0% |
| ! | TTTTTGTCCTTCACTTTGTT+TGG | - | chr2_3:10077644-10077663 | Msa0277490:intron | 30.0% |
| !! | GTTATTTCTCACCATCATAT+AGG | - | chr2_3:10077865-10077884 | Msa0277490:intron | 30.0% |
| !!! | TTTAGGTTTTGAACTGCTAA+TGG | - | chr2_3:10077968-10077987 | Msa0277490:intron | 30.0% |
| ATATTTCACGTCAAGAAATC+TGG | + | chr2_3:10077998-10078017 | None:intergenic | 30.0% | |
| ! | ATATGTTTTGCTTAGTAGCT+AGG | - | chr2_3:10078070-10078089 | Msa0277490:CDS | 30.0% |
| TAAGACGATAAATGAGTACA+AGG | + | chr2_3:10078234-10078253 | None:intergenic | 30.0% | |
| GTCTTATCTTGCAATACTAT+TGG | - | chr2_3:10078248-10078267 | Msa0277490:intron | 30.0% | |
| AAACATTAATTCACGGGAAA+AGG | + | chr2_3:10078631-10078650 | None:intergenic | 30.0% | |
| GAATTAATATTGCAGACTTG+AGG | + | chr2_3:10078673-10078692 | None:intergenic | 30.0% | |
| GGTCAAAAATACATTTACAC+TGG | - | chr2_3:10078783-10078802 | Msa0277490:CDS | 30.0% | |
| !! | TATAAGCAAGTGTTTTTACC+AGG | + | chr2_3:10078839-10078858 | None:intergenic | 30.0% |
| ! | ACATGATTAGTTGTGATTTG+TGG | + | chr2_3:10078903-10078922 | None:intergenic | 30.0% |
| GCTACCTAAATATATGTATC+CGG | + | chr2_3:10079328-10079347 | None:intergenic | 30.0% | |
| TTCTCTTACACCAATAGAAA+AGG | - | chr2_3:10079389-10079408 | Msa0277490:five_prime_UTR | 30.0% | |
| !!! | ACTTTTGGAACCTTTTCTAT+TGG | + | chr2_3:10079402-10079421 | None:intergenic | 30.0% |
| TTCACCATCACTAAAACAAG+GGG | + | chr2_3:10074280-10074299 | None:intergenic | 35.0% | |
| AAGAGAAAATGAATGTGGGT+TGG | + | chr2_3:10074322-10074341 | None:intergenic | 35.0% | |
| ATTCATAGTGTGAGGCTAAA+AGG | - | chr2_3:10074515-10074534 | Msa0277490:intron | 35.0% | |
| ACAAGTGACTGTATGAATGA+TGG | - | chr2_3:10074736-10074755 | Msa0277490:intron | 35.0% | |
| AGTAATGAATCTAGTGGAAG+TGG | - | chr2_3:10074769-10074788 | Msa0277490:intron | 35.0% | |
| AATTACCTGCATCAACTGTA+AGG | - | chr2_3:10074899-10074918 | Msa0277490:intron | 35.0% | |
| !! | GAAGGTAATTTTTCTGGAAG+AGG | - | chr2_3:10074937-10074956 | Msa0277490:intron | 35.0% |
| ! | GATGGTTCTCTTTTTATTGC+TGG | - | chr2_3:10075072-10075091 | Msa0277490:intron | 35.0% |
| AGTAACTACAATCAGAATGG+TGG | + | chr2_3:10075115-10075134 | None:intergenic | 35.0% | |
| TGAAGTGAAGCTGAAATATG+AGG | - | chr2_3:10075151-10075170 | Msa0277490:intron | 35.0% | |
| GTAACGATTTAAAGACCCTT+TGG | + | chr2_3:10075359-10075378 | None:intergenic | 35.0% | |
| GGTCTTTAAATCGTTACTTG+TGG | - | chr2_3:10075362-10075381 | Msa0277490:intron | 35.0% | |
| TGACAAAAAATCCTTACTCG+CGG | - | chr2_3:10075395-10075414 | Msa0277490:intron | 35.0% | |
| TATATGATGTTGACAAGGAC+TGG | - | chr2_3:10075458-10075477 | Msa0277490:intron | 35.0% | |
| CTTACAAGATATTGTCGATC+AGG | + | chr2_3:10075547-10075566 | None:intergenic | 35.0% | |
| !! | AACTTGTTTTCCATATGAGG+TGG | - | chr2_3:10075570-10075589 | Msa0277490:intron | 35.0% |
| CAAAGTTAAAAGGGACAAAC+TGG | + | chr2_3:10075690-10075709 | None:intergenic | 35.0% | |
| !! | GCAATTTGCTAATTGAACGA+AGG | + | chr2_3:10075844-10075863 | None:intergenic | 35.0% |
| CCGCAAGGCTATAAAATTTA+AGG | - | chr2_3:10076019-10076038 | Msa0277490:CDS | 35.0% | |
| CTCTCTGTATTCTTGCTAAA+TGG | - | chr2_3:10076148-10076167 | Msa0277490:intron | 35.0% | |
| GAAAATGACAAAGGGTGAAA+AGG | + | chr2_3:10076214-10076233 | None:intergenic | 35.0% | |
| AAATGAGATCAATTGACACC+AGG | - | chr2_3:10076259-10076278 | Msa0277490:intron | 35.0% | |
| CAAAGTTAAACTTTGACACC+TGG | + | chr2_3:10076280-10076299 | None:intergenic | 35.0% | |
| GATAGAACGTGTAATTGCTA+AGG | + | chr2_3:10076389-10076408 | None:intergenic | 35.0% | |
| TTGAAGTGTGTATATGCACA+TGG | + | chr2_3:10076523-10076542 | None:intergenic | 35.0% | |
| GATTTGTCCTAAATCGCTTT+CGG | - | chr2_3:10076857-10076876 | Msa0277490:intron | 35.0% | |
| CAATAATCCGAAAGCGATTT+AGG | + | chr2_3:10076867-10076886 | None:intergenic | 35.0% | |
| ! | GCTCAAAATATCGAGTCTTT+TGG | - | chr2_3:10076897-10076916 | Msa0277490:CDS | 35.0% |
| TCCCATTAGTAAGAAGTTTG+AGG | - | chr2_3:10076920-10076939 | Msa0277490:CDS | 35.0% | |
| ! | GTAAGAAGTTTGAGGTTTCA+AGG | - | chr2_3:10076928-10076947 | Msa0277490:CDS | 35.0% |
| TTGAGGTTTCAAGGAAGTAA+TGG | - | chr2_3:10076937-10076956 | Msa0277490:CDS | 35.0% | |
| TCTGGTCATCTCATATATTC+TGG | - | chr2_3:10077185-10077204 | Msa0277490:intron | 35.0% | |
| AAGTGATGATAGTTTCTGCA+AGG | - | chr2_3:10077208-10077227 | Msa0277490:intron | 35.0% | |
| GCATGTCATTATTCCATTGT+TGG | - | chr2_3:10077309-10077328 | Msa0277490:intron | 35.0% | |
| TACATTCATTAATAGTCGCG+GGG | - | chr2_3:10077529-10077548 | Msa0277490:intron | 35.0% | |
| GTATCTACCAAACAAAGTGA+AGG | + | chr2_3:10077654-10077673 | None:intergenic | 35.0% | |
| !!! | ATTCCATAGCTTTTAGCTCA+CGG | - | chr2_3:10078039-10078058 | Msa0277490:intron | 35.0% |
| GTGGTTAAATTGTTATCCGT+AGG | - | chr2_3:10078099-10078118 | Msa0277490:CDS | 35.0% | |
| ! | GTTTCAGAGGAAACTTTTTG+TGG | + | chr2_3:10078391-10078410 | None:intergenic | 35.0% |
| !!! | TGAAAGTACCCTTTTGACTT+AGG | - | chr2_3:10078502-10078521 | Msa0277490:intron | 35.0% |
| CATGGTAACCTAAGTCAAAA+GGG | + | chr2_3:10078513-10078532 | None:intergenic | 35.0% | |
| TGCAAAGAGTTAAGAGAACA+TGG | + | chr2_3:10078709-10078728 | None:intergenic | 35.0% | |
| ATTTACACTGGATCTAGTGA+TGG | - | chr2_3:10078795-10078814 | Msa0277490:CDS | 35.0% | |
| CTCTGTCTATATATATGACC+TGG | - | chr2_3:10078818-10078837 | Msa0277490:CDS | 35.0% | |
| !! | TGTCAAAAGTTCTGAACGAT+CGG | - | chr2_3:10078949-10078968 | Msa0277490:intron | 35.0% |
| ! | GATATCAGCATTGGATAGAA+AGG | + | chr2_3:10079164-10079183 | None:intergenic | 35.0% |
| AATGCTGATATCTTCAGCTT+GGG | - | chr2_3:10079172-10079191 | Msa0277490:intron | 35.0% | |
| CTCTCCGGATACATATATTT+AGG | - | chr2_3:10079321-10079340 | Msa0277490:intron | 35.0% | |
| AACACAACACTCACAGTTGA+TGG | - | chr2_3:10074174-10074193 | Msa0277490:three_prime_UTR | 40.0% | |
| TGAGGAATGAAACCTGTGAT+TGG | + | chr2_3:10074245-10074264 | None:intergenic | 40.0% | |
| TCACCATCACTAAAACAAGG+GGG | + | chr2_3:10074279-10074298 | None:intergenic | 40.0% | |
| GACTGTATGAATGATGGTAG+TGG | - | chr2_3:10074742-10074761 | Msa0277490:intron | 40.0% | |
| TGAATCTAGTGGAAGTGGAA+TGG | - | chr2_3:10074774-10074793 | Msa0277490:intron | 40.0% | |
| ACACGACTCAAATTCTCATG+TGG | + | chr2_3:10074862-10074881 | None:intergenic | 40.0% | |
| ! | AATTTGAGTCGTGTTGTTCC+TGG | - | chr2_3:10074868-10074887 | Msa0277490:intron | 40.0% |
| ! | AACATCCTTACAGTTGATGC+AGG | + | chr2_3:10074907-10074926 | None:intergenic | 40.0% |
| TGCATCAACTGTAAGGATGT+TGG | - | chr2_3:10074906-10074925 | Msa0277490:intron | 40.0% | |
| TCAACTGTAAGGATGTTGGT+AGG | - | chr2_3:10074910-10074929 | Msa0277490:intron | 40.0% | |
| ! | GGCAGAGAAGGTAATTTTTC+TGG | - | chr2_3:10074931-10074950 | Msa0277490:intron | 40.0% |
| ! | GTTTCGCAGTTTTCAGATGA+TGG | - | chr2_3:10075054-10075073 | Msa0277490:intron | 40.0% |
| !! | TACATGTGTTGGTGTTGTGT+TGG | - | chr2_3:10075235-10075254 | Msa0277490:intron | 40.0% |
| ACATCTCTGCCAGAAACTTA+CGG | - | chr2_3:10075494-10075513 | Msa0277490:intron | 40.0% | |
| AATTGTCCACCGTAAGTTTC+TGG | + | chr2_3:10075506-10075525 | None:intergenic | 40.0% | |
| CAGAATTGGCTGTTTATAGC+AGG | + | chr2_3:10075626-10075645 | None:intergenic | 40.0% | |
| TAAACAGCCAATTCTGACCA+TGG | - | chr2_3:10075630-10075649 | Msa0277490:intron | 40.0% | |
| TTAGATGAATTCACGAGCCA+TGG | + | chr2_3:10075650-10075669 | None:intergenic | 40.0% | |
| CCATATTGTCAATGCAGGAT+CGG | - | chr2_3:10075768-10075787 | Msa0277490:CDS | 40.0% | |
| CAATATGAGAATTAGCTGGG+TGG | + | chr2_3:10075882-10075901 | None:intergenic | 40.0% | |
| AATGGTAGTTCACTGCAAGA+AGG | - | chr2_3:10076166-10076185 | Msa0277490:intron | 40.0% | |
| AGTGAATTATGGAGAGGCTT+TGG | + | chr2_3:10076336-10076355 | None:intergenic | 40.0% | |
| AGTTCTCACATGTTGTTCGA+CGG | - | chr2_3:10076358-10076377 | Msa0277490:intron | 40.0% | |
| TTCTTCGGCAAGCAACTAAA+AGG | + | chr2_3:10076413-10076432 | None:intergenic | 40.0% | |
| CGTGATGATCACAGATTCTT+CGG | + | chr2_3:10076428-10076447 | None:intergenic | 40.0% | |
| GAACTTCCTGCAATGAAAGA+AGG | + | chr2_3:10076572-10076591 | None:intergenic | 40.0% | |
| ATATGTAATACCAGGTGAGC+AGG | + | chr2_3:10076750-10076769 | None:intergenic | 40.0% | |
| ACATGGATACGTGTCAAACA+AGG | + | chr2_3:10076990-10077009 | None:intergenic | 40.0% | |
| AGATTCATCAGCAAAGCAGA+CGG | + | chr2_3:10077168-10077187 | None:intergenic | 40.0% | |
| AAAAGTGACACAAGCATCTG+CGG | + | chr2_3:10077273-10077292 | None:intergenic | 40.0% | |
| GCTGTTATTATGACCTGTAC+AGG | - | chr2_3:10077436-10077455 | Msa0277490:intron | 40.0% | |
| TATTATGACCTGTACAGGTG+TGG | - | chr2_3:10077441-10077460 | Msa0277490:intron | 40.0% | |
| ATTATGACCTGTACAGGTGT+GGG | - | chr2_3:10077442-10077461 | Msa0277490:intron | 40.0% | |
| ! | ATCTTGATGGGGCATTTAGA+AGG | - | chr2_3:10077503-10077522 | Msa0277490:intron | 40.0% |
| AAGACCAAACTACCAAGCTA+TGG | - | chr2_3:10077579-10077598 | Msa0277490:intron | 40.0% | |
| AGACCAAACTACCAAGCTAT+GGG | - | chr2_3:10077580-10077599 | Msa0277490:intron | 40.0% | |
| ! | ATTTAGGATAGTCCATCCAC+CGG | + | chr2_3:10077764-10077783 | None:intergenic | 40.0% |
| ! | AAGAAATTTAAGGCATCCCC+AGG | - | chr2_3:10077788-10077807 | Msa0277490:intron | 40.0% |
| CTTGATATGTTGCCAATGAC+TGG | + | chr2_3:10077815-10077834 | None:intergenic | 40.0% | |
| CAGTCATTGGCAACATATCA+AGG | - | chr2_3:10077813-10077832 | Msa0277490:CDS | 40.0% | |
| AGAGCAGTGATATACTAGAG+TGG | + | chr2_3:10077914-10077933 | None:intergenic | 40.0% | |
| TTACCGTGAGCTAAAAGCTA+TGG | + | chr2_3:10078045-10078064 | None:intergenic | 40.0% | |
| TTTGCTTAGTAGCTAGGAGT+TGG | - | chr2_3:10078076-10078095 | Msa0277490:CDS | 40.0% | |
| TTGCTTAGTAGCTAGGAGTT+GGG | - | chr2_3:10078077-10078096 | Msa0277490:CDS | 40.0% | |
| ! | TCAGGATTTCCAAAAGCACA+CGG | + | chr2_3:10078482-10078501 | None:intergenic | 40.0% |
| !! | GTCAAAAGGGTACTTTCATC+AGG | + | chr2_3:10078500-10078519 | None:intergenic | 40.0% |
| GCATGGTAACCTAAGTCAAA+AGG | + | chr2_3:10078514-10078533 | None:intergenic | 40.0% | |
| ! | TTTTTGACCAGTGCTGCAAA+AGG | + | chr2_3:10078772-10078791 | None:intergenic | 40.0% |
| TGTACACTGTTGGTGTAAAG+AGG | + | chr2_3:10079009-10079028 | None:intergenic | 40.0% | |
| TCACATTCTTTGTAGGTGAG+TGG | - | chr2_3:10079080-10079099 | Msa0277490:intron | 40.0% | |
| CAAGCTGAAGATATCAGCAT+TGG | + | chr2_3:10079173-10079192 | None:intergenic | 40.0% | |
| CAATGCTGATATCTTCAGCT+TGG | - | chr2_3:10079171-10079190 | Msa0277490:intron | 40.0% | |
| ATTGTTAGGTGGGAATTTCC+TGG | - | chr2_3:10079203-10079222 | Msa0277490:intron | 40.0% | |
| ACTCCAGTGGATCTTCTATT+TGG | + | chr2_3:10079254-10079273 | None:intergenic | 40.0% | |
| GATTGGAGAATGAAGCGATG+AGG | + | chr2_3:10074228-10074247 | None:intergenic | 45.0% | |
| TCGCTTCATTCTCCAATCAC+AGG | - | chr2_3:10074230-10074249 | Msa0277490:three_prime_UTR | 45.0% | |
| CTAAAACAAGGGGGGTTTAG+AGG | + | chr2_3:10074270-10074289 | None:intergenic | 45.0% | |
| !!! | AACCCCCCTTGTTTTAGTGA+TGG | - | chr2_3:10074273-10074292 | Msa0277490:three_prime_UTR | 45.0% |
| CACCATCACTAAAACAAGGG+GGG | + | chr2_3:10074278-10074297 | None:intergenic | 45.0% | |
| GGCAGCAGTAATGAATCTAG+TGG | - | chr2_3:10074763-10074782 | Msa0277490:intron | 45.0% | |
| TCTAGTGGAAGTGGAATGGA+TGG | - | chr2_3:10074778-10074797 | Msa0277490:intron | 45.0% | |
| TTGCACAGATCACAAAGCTC+AGG | - | chr2_3:10074830-10074849 | Msa0277490:intron | 45.0% | |
| GACCTTTGGTAGGCAAATAG+CGG | + | chr2_3:10074999-10075018 | None:intergenic | 45.0% | |
| ATTTGCCTACCAAAGGTCCT+TGG | - | chr2_3:10075001-10075020 | Msa0277490:intron | 45.0% | |
| ACAATCCAAGGACCTTTGGT+AGG | + | chr2_3:10075009-10075028 | None:intergenic | 45.0% | |
| ATCGACAATCCAAGGACCTT+TGG | + | chr2_3:10075013-10075032 | None:intergenic | 45.0% | |
| ! | ACACCCTTAATCGGAAGTGT+CGG | - | chr2_3:10075267-10075286 | Msa0277490:intron | 45.0% |
| ACACCGACACTTCCGATTAA+GGG | + | chr2_3:10075273-10075292 | None:intergenic | 45.0% | |
| AACACCGACACTTCCGATTA+AGG | + | chr2_3:10075274-10075293 | None:intergenic | 45.0% | |
| ! | CATTTGCCAGCTTTCTAGGA+TGG | - | chr2_3:10075593-10075612 | Msa0277490:intron | 45.0% |
| AATCTGCCATCCTAGAAAGC+TGG | + | chr2_3:10075602-10075621 | None:intergenic | 45.0% | |
| ! | CCGATCCTGCATTGACAATA+TGG | + | chr2_3:10075771-10075790 | None:intergenic | 45.0% |
| GACAAAAAAACTCGACCGCA+AGG | - | chr2_3:10076004-10076023 | Msa0277490:CDS | 45.0% | |
| TCACTGCAAGAAGGATGCAT+AGG | - | chr2_3:10076175-10076194 | Msa0277490:intron | 45.0% | |
| CACTGCAAGAAGGATGCATA+GGG | - | chr2_3:10076176-10076195 | Msa0277490:intron | 45.0% | |
| ACTGCAAGAAGGATGCATAG+GGG | - | chr2_3:10076177-10076196 | Msa0277490:intron | 45.0% | |
| GAACGTGTAATTGCTAAGGG+TGG | + | chr2_3:10076385-10076404 | None:intergenic | 45.0% | |
| TCATTGCAGGAAGTTCACGA+TGG | - | chr2_3:10076576-10076595 | Msa0277490:intron | 45.0% | |
| GTCTGCTTTGCTGATGAATC+TGG | - | chr2_3:10077167-10077186 | Msa0277490:intron | 45.0% | |
| TTCATTAATAGTCGCGGGGA+TGG | - | chr2_3:10077533-10077552 | Msa0277490:intron | 45.0% | |
| ! | TGTCCCATAGCTTGGTAGTT+TGG | + | chr2_3:10077586-10077605 | None:intergenic | 45.0% |
| CTACCAAGCTATGGGACATA+AGG | - | chr2_3:10077588-10077607 | Msa0277490:intron | 45.0% | |
| CTTCCTTATGTCCCATAGCT+TGG | + | chr2_3:10077594-10077613 | None:intergenic | 45.0% | |
| AGTGCTGCAAAAGGAAATGC+AGG | + | chr2_3:10078763-10078782 | None:intergenic | 45.0% | |
| ! | TGCATTTCCTTTTGCAGCAC+TGG | - | chr2_3:10078762-10078781 | Msa0277490:CDS | 45.0% |
| ! | CACCTTTAAGAGATTGCAGC+TGG | - | chr2_3:10079135-10079154 | Msa0277490:intron | 45.0% |
| TGCCAGCTGCAATCTCTTAA+AGG | + | chr2_3:10079140-10079159 | None:intergenic | 45.0% | |
| CTGATATCTTCAGCTTGGGA+TGG | - | chr2_3:10079176-10079195 | Msa0277490:intron | 45.0% | |
| CTTGGGATGGTGACATTGTT+AGG | - | chr2_3:10079189-10079208 | Msa0277490:intron | 45.0% | |
| GGATGGTGACATTGTTAGGT+GGG | - | chr2_3:10079193-10079212 | Msa0277490:intron | 45.0% | |
| AGGTGGGAATTTCCTGGAAA+TGG | - | chr2_3:10079209-10079228 | Msa0277490:intron | 45.0% | |
| GTGGATCTTCTATTTGGAGG+AGG | + | chr2_3:10079248-10079267 | None:intergenic | 45.0% | |
| CCAGTGGATCTTCTATTTGG+AGG | + | chr2_3:10079251-10079270 | None:intergenic | 45.0% | |
| CCTCCAAATAGAAGATCCAC+TGG | - | chr2_3:10079248-10079267 | Msa0277490:intron | 45.0% | |
| TCCACTGGAGTTCGTATTAG+AGG | - | chr2_3:10079263-10079282 | Msa0277490:intron | 45.0% | |
| ACCTCTAATACGAACTCCAG+TGG | + | chr2_3:10079267-10079286 | None:intergenic | 45.0% | |
| AAGGGGGGTTTAGAGGATTG+AGG | + | chr2_3:10074263-10074282 | None:intergenic | 50.0% | |
| GGAAGTGGAATGGATGGAGA+AGG | - | chr2_3:10074784-10074803 | Msa0277490:CDS | 50.0% | |
| ! | GAGTCGTGTTGTTCCTGGTA+CGG | - | chr2_3:10074873-10074892 | Msa0277490:intron | 50.0% |
| ! | AGTCGTGTTGTTCCTGGTAC+GGG | - | chr2_3:10074874-10074893 | Msa0277490:intron | 50.0% |
| ! | AGGATGTTGGTAGGCAGAGA+AGG | - | chr2_3:10074919-10074938 | Msa0277490:intron | 50.0% |
| AGCCGCTATTTGCCTACCAA+AGG | - | chr2_3:10074994-10075013 | Msa0277490:intron | 50.0% | |
| TCCTTGGATTGTCGATCGCA+TGG | - | chr2_3:10075017-10075036 | Msa0277490:intron | 50.0% | |
| CCTTGGATTGTCGATCGCAT+GGG | - | chr2_3:10075018-10075037 | Msa0277490:intron | 50.0% | |
| !! | GTTGGTGTTGTGTTGGACAC+CGG | - | chr2_3:10075242-10075261 | Msa0277490:intron | 50.0% |
| ACACCGGACACACCCTTAAT+CGG | - | chr2_3:10075258-10075277 | Msa0277490:intron | 50.0% | |
| ! | CTTCCGATTAAGGGTGTGTC+CGG | + | chr2_3:10075264-10075283 | None:intergenic | 50.0% |
| AGCACAAACAACCGCGAGTA+AGG | + | chr2_3:10075409-10075428 | None:intergenic | 50.0% | |
| TCTCTGCCAGAAACTTACGG+TGG | - | chr2_3:10075497-10075516 | Msa0277490:intron | 50.0% | |
| CTGGCAAATGCCACCTCATA+TGG | + | chr2_3:10075583-10075602 | None:intergenic | 50.0% | |
| GTGGCATTTGCCAGCTTTCT+AGG | - | chr2_3:10075589-10075608 | Msa0277490:intron | 50.0% | |
| TCACGAGCCATGGTCAGAAT+TGG | + | chr2_3:10075640-10075659 | None:intergenic | 50.0% | |
| CTGCAAGAAGGATGCATAGG+GGG | - | chr2_3:10076178-10076197 | Msa0277490:intron | 50.0% | |
| ! | AGGCGTTGCTTTGCTGCAAA+AGG | - | chr2_3:10077467-10077486 | Msa0277490:intron | 50.0% |
| ACAACCAGCTGGCATCTTGA+TGG | - | chr2_3:10077490-10077509 | Msa0277490:intron | 50.0% | |
| CAACCAGCTGGCATCTTGAT+GGG | - | chr2_3:10077491-10077510 | Msa0277490:intron | 50.0% | |
| AACCAGCTGGCATCTTGATG+GGG | - | chr2_3:10077492-10077511 | Msa0277490:intron | 50.0% | |
| TAAACCTACAGTCTGGGCCT+TGG | - | chr2_3:10077720-10077739 | Msa0277490:intron | 50.0% | |
| ! | TGTTGCCAATGACTGGTCCT+GGG | + | chr2_3:10077808-10077827 | None:intergenic | 50.0% |
| ! | ATGTTGCCAATGACTGGTCC+TGG | + | chr2_3:10077809-10077828 | None:intergenic | 50.0% |
| CCGAACTAGAGTACGCAACA+CGG | + | chr2_3:10077844-10077863 | None:intergenic | 50.0% | |
| CCGTGTTGCGTACTCTAGTT+CGG | - | chr2_3:10077841-10077860 | Msa0277490:CDS | 50.0% | |
| CTTAGTAGCTAGGAGTTGGG+TGG | - | chr2_3:10078080-10078099 | Msa0277490:CDS | 50.0% | |
| ! | TCCAAGTCTCCGTGTGCTTT+TGG | - | chr2_3:10078470-10078489 | Msa0277490:intron | 50.0% |
| ! | TCCAAAAGCACACGGAGACT+TGG | + | chr2_3:10078474-10078493 | None:intergenic | 50.0% |
| GGGATGGTGACATTGTTAGG+TGG | - | chr2_3:10079192-10079211 | Msa0277490:intron | 50.0% | |
| CTTCTATTTGGAGGAGGAGC+AGG | + | chr2_3:10079242-10079261 | None:intergenic | 50.0% | |
| ! | GTCGTGTTGTTCCTGGTACG+GGG | - | chr2_3:10074875-10074894 | Msa0277490:intron | 55.0% |
| GCAGGTAATTTCCCCGTACC+AGG | + | chr2_3:10074889-10074908 | None:intergenic | 55.0% | |
| CCCATGCGATCGACAATCCA+AGG | + | chr2_3:10075021-10075040 | None:intergenic | 55.0% | |
| CCAGGTGAGCAGGAATTCTG+AGG | + | chr2_3:10076740-10076759 | None:intergenic | 55.0% | |
| CCTCAGAATTCCTGCTCACC+TGG | - | chr2_3:10076737-10076756 | Msa0277490:intron | 55.0% | |
| GACCTGTACAGGTGTGGGAT+AGG | - | chr2_3:10077447-10077466 | Msa0277490:intron | 55.0% | |
| GCTGCAAAAGGACAACCAGC+TGG | - | chr2_3:10077479-10077498 | Msa0277490:intron | 55.0% | |
| ! | GTTGCCAATGACTGGTCCTG+GGG | + | chr2_3:10077807-10077826 | None:intergenic | 55.0% |
| CTAGAGTACGCAACACGGAG+TGG | + | chr2_3:10077839-10077858 | None:intergenic | 55.0% | |
| GCAGGAGGTTGACCATTTCC+AGG | + | chr2_3:10079224-10079243 | None:intergenic | 55.0% | |
| CTATTTGGAGGAGGAGCAGG+AGG | + | chr2_3:10079239-10079258 | None:intergenic | 55.0% | |
| GGATGCATAGGGGGAGAGCA+AGG | - | chr2_3:10076187-10076206 | Msa0277490:intron | 60.0% | |
| GATGGGCGAGAGCTTGTGTC+TGG | - | chr2_3:10076663-10076682 | Msa0277490:intron | 60.0% | |
| CGCCTATCCCACACCTGTAC+AGG | + | chr2_3:10077452-10077471 | None:intergenic | 60.0% | |
| TGCCCCATCAAGATGCCAGC+TGG | + | chr2_3:10077497-10077516 | None:intergenic | 60.0% | |
| GTCTCCAAGGCCCAGACTGT+AGG | + | chr2_3:10077727-10077746 | None:intergenic | 60.0% | |
| AGTCCCACTCGTCGTCTCCA+AGG | + | chr2_3:10077740-10077759 | None:intergenic | 60.0% | |
| GAGACGACGAGTGGGACTAC+CGG | - | chr2_3:10077742-10077761 | Msa0277490:intron | 60.0% | |
| GCATCCCCAGGACCAGTCAT+TGG | - | chr2_3:10077800-10077819 | Msa0277490:CDS | 60.0% | |
| TGGGCCTTGGAGACGACGAG+TGG | - | chr2_3:10077733-10077752 | Msa0277490:intron | 65.0% | |
| GGGCCTTGGAGACGACGAGT+GGG | - | chr2_3:10077734-10077753 | Msa0277490:intron | 65.0% | |
| ACGACGAGTGGGACTACCGG+TGG | - | chr2_3:10077745-10077764 | Msa0277490:intron | 65.0% | |
| CGAGTGGGACTACCGGTGGA+TGG | - | chr2_3:10077749-10077768 | Msa0277490:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 10074090 | 10079528 | 10074090 | ID=Msa0277490;Name=Msa0277490 |
| chr2_3 | mRNA | 10074090 | 10079528 | 10074090 | ID=Msa0277490-mRNA-1;Parent=Msa0277490;Name=Msa0277490-mRNA-1;_AED=0.05;_eAED=0.05;_QI=184|1|1|1|0.88|0.8|10|227|475 |
| chr2_3 | exon | 10074090 | 10074523 | 10074090 | ID=Msa0277490-mRNA-1:exon:4485;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10074779 | 10074839 | 10074779 | ID=Msa0277490-mRNA-1:exon:4484;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10075732 | 10075887 | 10075732 | ID=Msa0277490-mRNA-1:exon:4483;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10075985 | 10076160 | 10075985 | ID=Msa0277490-mRNA-1:exon:4482;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10076389 | 10076466 | 10076389 | ID=Msa0277490-mRNA-1:exon:4481;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10076860 | 10077033 | 10076860 | ID=Msa0277490-mRNA-1:exon:4480;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10077799 | 10077876 | 10077799 | ID=Msa0277490-mRNA-1:exon:4479;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10078057 | 10078176 | 10078057 | ID=Msa0277490-mRNA-1:exon:4478;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10078517 | 10078916 | 10078517 | ID=Msa0277490-mRNA-1:exon:4477;Parent=Msa0277490-mRNA-1 |
| chr2_3 | exon | 10079367 | 10079528 | 10079367 | ID=Msa0277490-mRNA-1:exon:4476;Parent=Msa0277490-mRNA-1 |
| chr2_3 | five_prime_UTR | 10079367 | 10079528 | 10079367 | ID=Msa0277490-mRNA-1:five_prime_utr;Parent=Msa0277490-mRNA-1 |
| chr2_3 | five_prime_UTR | 10078895 | 10078916 | 10078895 | ID=Msa0277490-mRNA-1:five_prime_utr;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10078517 | 10078894 | 10078517 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10078057 | 10078176 | 10078057 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10077799 | 10077876 | 10077799 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10076860 | 10077033 | 10076860 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10076389 | 10076466 | 10076389 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10075985 | 10076160 | 10075985 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10075732 | 10075887 | 10075732 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10074779 | 10074839 | 10074779 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | CDS | 10074317 | 10074523 | 10074317 | ID=Msa0277490-mRNA-1:cds;Parent=Msa0277490-mRNA-1 |
| chr2_3 | three_prime_UTR | 10074090 | 10074316 | 10074090 | ID=Msa0277490-mRNA-1:three_prime_utr;Parent=Msa0277490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
