Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200250 | XP_013463211.1 | 95.935 | 246 | 10 | 0 | 1 | 246 | 1 | 246 | 5.31e-162 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200250 | sp|Q84WN3|SWT17_ARATH | 58.261 | 230 | 94 | 2 | 1 | 229 | 1 | 229 | 2.52e-92 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200250 | A0A072VGC9 | 95.935 | 246 | 10 | 0 | 1 | 246 | 1 | 246 | 2.54e-162 | 458 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0200250 | Msa0243080 | 0.834538 | 2.829456e-56 | -8.615850e-47 |
| Msa0200250 | Msa0281290 | 0.949793 | 6.181438e-108 | -8.615850e-47 |
| Msa0200250 | Msa0320480 | 0.977782 | 1.788167e-144 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200250 | MtrunA17_Chr2g0295681 | 95.935 | 246 | 10 | 0 | 1 | 246 | 1 | 246 | 4.88e-166 | 458 |
| Msa0200250 | MtrunA17_Chr5g0428281 | 41.784 | 213 | 124 | 0 | 5 | 217 | 10 | 222 | 2.03e-58 | 186 |
| Msa0200250 | MtrunA17_Chr3g0125861 | 42.017 | 238 | 132 | 4 | 9 | 242 | 9 | 244 | 6.51e-57 | 181 |
| Msa0200250 | MtrunA17_Chr1g0159431 | 42.601 | 223 | 125 | 2 | 6 | 226 | 6 | 227 | 3.33e-56 | 179 |
| Msa0200250 | MtrunA17_Chr8g0386011 | 41.818 | 220 | 127 | 1 | 5 | 223 | 9 | 228 | 6.18e-56 | 179 |
| Msa0200250 | MtrunA17_Chr3g0131961 | 41.964 | 224 | 126 | 3 | 5 | 227 | 10 | 230 | 7.67e-54 | 174 |
| Msa0200250 | MtrunA17_Chr6g0450941 | 45.205 | 219 | 113 | 5 | 8 | 220 | 84 | 301 | 1.50e-53 | 175 |
| Msa0200250 | MtrunA17_Chr3g0131951 | 40.191 | 209 | 124 | 1 | 5 | 212 | 71 | 279 | 1.57e-52 | 174 |
| Msa0200250 | MtrunA17_Chr5g0444031 | 38.182 | 220 | 133 | 2 | 6 | 223 | 31 | 249 | 2.18e-52 | 171 |
| Msa0200250 | MtrunA17_Chr3g0119951 | 39.256 | 242 | 138 | 3 | 8 | 241 | 11 | 251 | 4.53e-52 | 169 |
| Msa0200250 | MtrunA17_Chr7g0215601 | 36.522 | 230 | 142 | 2 | 9 | 238 | 14 | 239 | 9.40e-52 | 169 |
| Msa0200250 | MtrunA17_Chr8g0386001 | 37.719 | 228 | 135 | 2 | 6 | 226 | 10 | 237 | 7.45e-51 | 167 |
| Msa0200250 | MtrunA17_Chr7g0214191 | 43.478 | 207 | 117 | 0 | 5 | 211 | 9 | 215 | 1.89e-50 | 166 |
| Msa0200250 | MtrunA17_Chr8g0388621 | 41.818 | 220 | 123 | 2 | 8 | 222 | 13 | 232 | 8.66e-50 | 163 |
| Msa0200250 | MtrunA17_Chr3g0119991 | 38.961 | 231 | 132 | 3 | 19 | 241 | 1 | 230 | 5.42e-48 | 159 |
| Msa0200250 | MtrunA17_Chr7g0214181 | 39.535 | 215 | 130 | 0 | 5 | 219 | 9 | 223 | 1.54e-47 | 158 |
| Msa0200250 | MtrunA17_Chr1g0158931 | 40.639 | 219 | 126 | 1 | 8 | 222 | 9 | 227 | 3.51e-46 | 154 |
| Msa0200250 | MtrunA17_Chr8g0359261 | 41.860 | 215 | 114 | 4 | 9 | 217 | 18 | 227 | 1.19e-44 | 150 |
| Msa0200250 | MtrunA17_Chr6g0450931 | 43.000 | 200 | 109 | 4 | 25 | 220 | 5 | 203 | 4.26e-44 | 147 |
| Msa0200250 | MtrunA17_Chr3g0126411 | 40.179 | 224 | 125 | 5 | 8 | 224 | 9 | 230 | 9.81e-44 | 148 |
| Msa0200250 | MtrunA17_Chr3g0126421 | 38.739 | 222 | 131 | 2 | 8 | 224 | 9 | 230 | 2.78e-43 | 147 |
| Msa0200250 | MtrunA17_Chr6g0450951 | 42.708 | 192 | 105 | 4 | 25 | 212 | 5 | 195 | 7.88e-43 | 145 |
| Msa0200250 | MtrunA17_Chr2g0314571 | 39.815 | 216 | 125 | 3 | 9 | 221 | 18 | 231 | 2.82e-41 | 141 |
| Msa0200250 | MtrunA17_Chr4g0059191 | 41.885 | 191 | 107 | 3 | 21 | 208 | 1 | 190 | 3.70e-41 | 140 |
| Msa0200250 | MtrunA17_Chr2g0278491 | 36.842 | 171 | 102 | 2 | 53 | 223 | 2 | 166 | 2.65e-32 | 117 |
| Msa0200250 | MtrunA17_Chr6g0450901 | 44.444 | 99 | 54 | 1 | 121 | 218 | 6 | 104 | 2.70e-18 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200250 | AT4G15920.1 | 58.261 | 230 | 94 | 2 | 1 | 229 | 1 | 229 | 2.32e-93 | 275 |
| Msa0200250 | AT3G16690.1 | 52.444 | 225 | 102 | 2 | 1 | 224 | 1 | 221 | 6.55e-82 | 245 |
| Msa0200250 | AT3G16690.3 | 52.444 | 225 | 102 | 2 | 1 | 224 | 36 | 256 | 8.10e-82 | 246 |
| Msa0200250 | AT1G21460.1 | 43.836 | 219 | 116 | 3 | 9 | 223 | 9 | 224 | 1.95e-57 | 183 |
| Msa0200250 | AT3G48740.1 | 39.091 | 220 | 134 | 0 | 5 | 224 | 11 | 230 | 1.86e-56 | 182 |
| Msa0200250 | AT4G10850.1 | 41.256 | 223 | 124 | 3 | 8 | 225 | 13 | 233 | 2.83e-56 | 181 |
| Msa0200250 | AT5G50800.1 | 39.316 | 234 | 140 | 2 | 5 | 236 | 9 | 242 | 4.76e-56 | 181 |
| Msa0200250 | AT5G13170.1 | 38.636 | 220 | 134 | 1 | 5 | 223 | 11 | 230 | 3.57e-55 | 179 |
| Msa0200250 | AT5G23660.1 | 38.496 | 226 | 136 | 1 | 5 | 230 | 11 | 233 | 7.57e-54 | 175 |
| Msa0200250 | AT3G16690.2 | 53.020 | 149 | 69 | 1 | 1 | 148 | 1 | 149 | 3.48e-53 | 171 |
| Msa0200250 | AT1G66770.1 | 39.506 | 243 | 139 | 5 | 8 | 245 | 13 | 252 | 8.45e-53 | 172 |
| Msa0200250 | AT4G25010.1 | 37.975 | 237 | 142 | 2 | 9 | 240 | 13 | 249 | 2.19e-52 | 171 |
| Msa0200250 | AT2G39060.1 | 40.000 | 210 | 126 | 0 | 5 | 214 | 9 | 218 | 3.45e-52 | 170 |
| Msa0200250 | AT5G62850.1 | 38.494 | 239 | 131 | 5 | 1 | 224 | 1 | 238 | 9.42e-52 | 168 |
| Msa0200250 | AT5G40260.1 | 42.105 | 209 | 114 | 6 | 6 | 208 | 9 | 216 | 1.80e-48 | 160 |
| Msa0200250 | AT5G50790.1 | 34.298 | 242 | 154 | 2 | 9 | 245 | 13 | 254 | 6.24e-48 | 160 |
| Msa0200250 | AT5G53190.1 | 38.865 | 229 | 128 | 4 | 8 | 228 | 9 | 233 | 7.74e-48 | 159 |
| Msa0200250 | AT1G21460.2 | 43.750 | 192 | 101 | 3 | 9 | 196 | 9 | 197 | 5.45e-47 | 155 |
| Msa0200250 | AT5G40260.2 | 43.716 | 183 | 97 | 5 | 6 | 183 | 9 | 190 | 1.79e-45 | 151 |
| Msa0200250 | AT5G62850.2 | 41.579 | 190 | 104 | 4 | 1 | 184 | 1 | 189 | 8.34e-45 | 150 |
| Msa0200250 | AT3G28007.1 | 40.686 | 204 | 115 | 3 | 9 | 208 | 12 | 213 | 5.86e-41 | 141 |
| Msa0200250 | AT3G14770.1 | 34.956 | 226 | 136 | 3 | 9 | 232 | 18 | 234 | 1.24e-35 | 127 |
Find 60 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTCTTGCTGGGATTT+TGG | 0.124715 | 2_1:+19929094 | Msa0200250:CDS |
| CTTGTTCGTGATTCCATTCT+TGG | 0.150295 | 2_1:+19935382 | Msa0200250:CDS |
| TATAATGCAGACCAACATTT+TGG | 0.198727 | 2_1:+19928370 | Msa0200250:intron |
| TACCTTGTGGCCACTGTTAA+TGG | 0.201020 | 2_1:+19928501 | Msa0200250:CDS |
| TCTTCATTGTGGACTTACTA+TGG | 0.279770 | 2_1:+19928459 | Msa0200250:CDS |
| GAAGCATAGTTCAAACAAAT+TGG | 0.301687 | 2_1:+19935869 | Msa0200250:CDS |
| TACCAAAGGCTCTTAAAATC+TGG | 0.315961 | 2_1:-19936189 | None:intergenic |
| GTAGTTTCAATTTCTTCTTT+TGG | 0.316397 | 2_1:-19928009 | None:intergenic |
| TTGTTCGTGATTCCATTCTT+GGG | 0.316813 | 2_1:+19935383 | Msa0200250:CDS |
| GTGGCCACTGTTAATGGCTT+TGG | 0.323328 | 2_1:+19928507 | Msa0200250:CDS |
| AGTTTCTTTGTTGGAGTTGT+AGG | 0.327966 | 2_1:+19928074 | Msa0200250:CDS |
| ACTTCAACATACATCAATTC+TGG | 0.329761 | 2_1:-19936264 | None:intergenic |
| TAGGCAGAAGAGTGAGAATA+AGG | 0.349656 | 2_1:-19927970 | None:intergenic |
| AAGAAGAGTTTCTTATTGTC+TGG | 0.353074 | 2_1:-19927942 | None:intergenic |
| TCTTAAAATCTGGGCATATA+AGG | 0.358195 | 2_1:-19936179 | None:intergenic |
| AAAATTCATTGACTCTTCCT+TGG | 0.358647 | 2_1:-19936033 | None:intergenic |
| GCTTTGAACATTCTTATGTA+TGG | 0.363700 | 2_1:+19929206 | Msa0200250:CDS |
| GTGAAGACTGCAATTCTTGC+TGG | 0.366290 | 2_1:+19929086 | Msa0200250:CDS |
| TAGTGGTGCTGTTGGTATCA+TGG | 0.401798 | 2_1:+19929178 | Msa0200250:CDS |
| GCAGATCCAAGTTTCTTTGT+TGG | 0.416684 | 2_1:+19928065 | Msa0200250:CDS |
| TGAAAGCAAAATGACTAGAT+AGG | 0.435183 | 2_1:-19935960 | None:intergenic |
| TGGCTCACCTCTTGCTGTCA+TGG | 0.454725 | 2_1:+19929226 | Msa0200250:CDS |
| TTAAGCAATGTGCATATGTA+AGG | 0.458717 | 2_1:-19928435 | None:intergenic |
| ACCAAAGGCTCTTAAAATCT+GGG | 0.464412 | 2_1:-19936188 | None:intergenic |
| TGGTGTGCATATTTATGGCT+AGG | 0.464602 | 2_1:-19927989 | None:intergenic |
| AACGGTACTGGATTTGTACT+TGG | 0.465985 | 2_1:+19935798 | Msa0200250:CDS |
| TACTACTCAATTAGCATTGG+AGG | 0.468548 | 2_1:+19929145 | Msa0200250:CDS |
| CAAGTTTCAAAGTTATATGT+TGG | 0.483935 | 2_1:+19935981 | Msa0200250:three_prime_UTR |
| TAACAGGTACCAAACGGTAC+TGG | 0.487057 | 2_1:+19935786 | Msa0200250:intron |
| TACTATGGAACTATAAAAGC+TGG | 0.493273 | 2_1:+19928474 | Msa0200250:CDS |
| CTTGTTTCTTAGTTTCCTCA+TGG | 0.497080 | 2_1:+19928043 | Msa0200250:exon |
| ACAACTCCAACAAAGAAACT+TGG | 0.497523 | 2_1:-19928071 | None:intergenic |
| ACCAGAGCTTACCCCAAGAA+TGG | 0.501782 | 2_1:-19935395 | None:intergenic |
| TTTATTATTCTCCAAAATGT+TGG | 0.503864 | 2_1:-19928381 | None:intergenic |
| TGAAGACTGCAATTCTTGCT+GGG | 0.514788 | 2_1:+19929087 | Msa0200250:CDS |
| GATTACTACTCAATTAGCAT+TGG | 0.521186 | 2_1:+19929142 | Msa0200250:CDS |
| AATAAATAACAGGTACCAAA+CGG | 0.527804 | 2_1:+19935780 | Msa0200250:intron |
| AGTGGTGCTGTTGGTATCAT+GGG | 0.532404 | 2_1:+19929179 | Msa0200250:CDS |
| CTATACAGTTAGTGTTGCAT+GGG | 0.542538 | 2_1:+19935823 | Msa0200250:CDS |
| GCTATACAGTTAGTGTTGCA+TGG | 0.548209 | 2_1:+19935822 | Msa0200250:CDS |
| TGTTCGTGATTCCATTCTTG+GGG | 0.555609 | 2_1:+19935384 | Msa0200250:CDS |
| AGTTCAAACAAATTGGAAGA+AGG | 0.559173 | 2_1:+19935876 | Msa0200250:CDS |
| AGTACAAATCCAGTACCGTT+TGG | 0.560971 | 2_1:-19935795 | None:intergenic |
| CAAACAAATTGGAAGAAGGA+TGG | 0.563874 | 2_1:+19935880 | Msa0200250:CDS |
| ATTGCATTCAAATATACCAA+AGG | 0.567836 | 2_1:-19936203 | None:intergenic |
| AAACTTACCATGACAGCAAG+AGG | 0.581451 | 2_1:-19929233 | None:intergenic |
| GAAGCTCGTAGTGGTGCTGT+TGG | 0.583483 | 2_1:+19929170 | Msa0200250:CDS |
| TTGCATGGGATTTACAGAGA+TGG | 0.585661 | 2_1:+19935837 | Msa0200250:CDS |
| ACTACTCAATTAGCATTGGA+GGG | 0.594157 | 2_1:+19929146 | Msa0200250:CDS |
| ATCATGTGACTGAGTAGTTG+AGG | 0.600181 | 2_1:-19935925 | None:intergenic |
| AGCCATTAACAGTGGCCACA+AGG | 0.600324 | 2_1:-19928503 | None:intergenic |
| GCAGAAGAGTGAGAATAAGG+TGG | 0.617108 | 2_1:-19927967 | None:intergenic |
| CATTGCTTAACTCTTCATTG+TGG | 0.620597 | 2_1:+19928448 | Msa0200250:CDS |
| TAATGGCTTTGGCATCGTGG+TGG | 0.662663 | 2_1:+19928518 | Msa0200250:CDS |
| TGTTAATGGCTTTGGCATCG+TGG | 0.667290 | 2_1:+19928515 | Msa0200250:CDS |
| TTGGAGGGAGAAGCTCGTAG+TGG | 0.699075 | 2_1:+19929161 | Msa0200250:CDS |
| AAAAGCTGGAGAATACCTTG+TGG | 0.701844 | 2_1:+19928488 | Msa0200250:CDS |
| TTGTAACTTTCAGAAAACGG+TGG | 0.711959 | 2_1:+19935273 | Msa0200250:intron |
| GATGCCAAAGCCATTAACAG+TGG | 0.716694 | 2_1:-19928511 | None:intergenic |
| AGAAACTTGGATCTGCCATG+AGG | 0.723218 | 2_1:-19928058 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTATTTTAAGATGTA+TGG | - | chr2_1:19928944-19928963 | None:intergenic | 10.0% |
| !! | AACTATATAATATTAATTAG+TGG | - | chr2_1:19929674-19929693 | None:intergenic | 10.0% |
| !!! | TATTTTTCTTTTATTTCTAT+TGG | + | chr2_1:19929992-19930011 | Msa0200250:intron | 10.0% |
| !!! | TTTGTCTTTTAATATTATTT+GGG | - | chr2_1:19932628-19932647 | None:intergenic | 10.0% |
| !!! | ATTTGTCTTTTAATATTATT+TGG | - | chr2_1:19932629-19932648 | None:intergenic | 10.0% |
| !!! | TTACAATCAATATTTTTATT+TGG | - | chr2_1:19932909-19932928 | None:intergenic | 10.0% |
| !! | ATATACATATAAATAGTTAA+AGG | + | chr2_1:19933763-19933782 | Msa0200250:intron | 10.0% |
| !! | AAATATAAATTGGAAATATT+GGG | - | chr2_1:19935135-19935154 | None:intergenic | 10.0% |
| !! | TAATATAATTACTTTACATA+TGG | - | chr2_1:19935455-19935474 | None:intergenic | 10.0% |
| !!! | TATATGAAATTTCCATTTTT+GGG | - | chr2_1:19928193-19928212 | None:intergenic | 15.0% |
| !!! | ATATATGAAATTTCCATTTT+TGG | - | chr2_1:19928194-19928213 | None:intergenic | 15.0% |
| !! | AAAAATGGAAATTTCATATA+TGG | + | chr2_1:19928193-19928212 | Msa0200250:intron | 15.0% |
| !! | TTTATTTCACTAATAATCTA+AGG | - | chr2_1:19929351-19929370 | None:intergenic | 15.0% |
| !! | ATAAATAGATTTCATGTTAT+AGG | + | chr2_1:19929366-19929385 | Msa0200250:intron | 15.0% |
| !!! | CTTGATTTTTTTTTTTTTGA+GGG | - | chr2_1:19929413-19929432 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTTTTTTTTTGAG+AGG | + | chr2_1:19929827-19929846 | Msa0200250:intron | 15.0% |
| !!! | GTTTTTTTTTTTTTTTGAGA+GGG | + | chr2_1:19929828-19929847 | Msa0200250:intron | 15.0% |
| !! | AAAATAATATAGAGAGAAAA+AGG | + | chr2_1:19930018-19930037 | Msa0200250:intron | 15.0% |
| !! | TAATGTTATGAATATTTGAA+CGG | + | chr2_1:19930581-19930600 | Msa0200250:intron | 15.0% |
| !!! | TTAATATTTTAGATATGCTT+TGG | - | chr2_1:19930932-19930951 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATTTTATGGTAA+GGG | - | chr2_1:19932141-19932160 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTATTTTATGGTA+AGG | - | chr2_1:19932142-19932161 | None:intergenic | 15.0% |
| !!! | TACTCTTTTGTTTTATTTTA+TGG | - | chr2_1:19932147-19932166 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATTTTATGGTAA+GGG | - | chr2_1:19932141-19932160 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTATTTTATGGTA+AGG | - | chr2_1:19932142-19932161 | None:intergenic | 15.0% |
| !!! | TACTCTTTTGTTTTATTTTA+TGG | - | chr2_1:19932147-19932166 | None:intergenic | 15.0% |
| !!! | CTACAATTTAATTTATAAGA+AGG | - | chr2_1:19932453-19932472 | None:intergenic | 15.0% |
| !!! | ATAAAAATATTGATTGTAAG+CGG | + | chr2_1:19932910-19932929 | Msa0200250:intron | 15.0% |
| !!! | TTATAATCATTTGATTAGTT+CGG | - | chr2_1:19932986-19933005 | None:intergenic | 15.0% |
| !! | TTAATAGTTTATCAATTATC+CGG | + | chr2_1:19933609-19933628 | Msa0200250:intron | 15.0% |
| !!! | TTAACACAAAAATTTTGAAA+TGG | + | chr2_1:19934849-19934868 | Msa0200250:intron | 15.0% |
| !!! | TAACACAAAAATTTTGAAAT+GGG | + | chr2_1:19934850-19934869 | Msa0200250:intron | 15.0% |
| !! | TTATAGTTTCTTAAAATTTG+TGG | + | chr2_1:19935100-19935119 | Msa0200250:intron | 15.0% |
| !! | GAAATATAAATTGGAAATAT+TGG | - | chr2_1:19935136-19935155 | None:intergenic | 15.0% |
| !!! | CATCATTTTGAAATATAAAT+TGG | - | chr2_1:19935145-19935164 | None:intergenic | 15.0% |
| !! | ACATTTAGAAGAAAAAAAAT+AGG | - | chr2_1:19935480-19935499 | None:intergenic | 15.0% |
| !! | CATTGTAAATAATAAATAAC+AGG | + | chr2_1:19935770-19935789 | Msa0200250:intron | 15.0% |
| !! | TTTATTATTCTCCAAAATGT+TGG | - | chr2_1:19928384-19928403 | None:intergenic | 20.0% |
| !! | GTATATGTTTGATTAAATTC+AGG | + | chr2_1:19929064-19929083 | Msa0200250:intron | 20.0% |
| !!! | CCTTGATTTTTTTTTTTTTG+AGG | - | chr2_1:19929414-19929433 | None:intergenic | 20.0% |
| !! | CCTCAAAAAAAAAAAAATCA+AGG | + | chr2_1:19929411-19929430 | Msa0200250:intron | 20.0% |
| !! | CAAAAAAAAAAAAATCAAGG+TGG | + | chr2_1:19929414-19929433 | Msa0200250:intron | 20.0% |
| !! | ATATATGAACAATCTATAGT+TGG | - | chr2_1:19929476-19929495 | None:intergenic | 20.0% |
| !! | AAATTTCATCTAAATTTCTG+TGG | + | chr2_1:19929564-19929583 | Msa0200250:intron | 20.0% |
| !! | AAAAGCAATATTAAGCTAAT+AGG | + | chr2_1:19929714-19929733 | Msa0200250:intron | 20.0% |
| !! | TATCATTTCTCTATCATAAA+TGG | + | chr2_1:19930117-19930136 | Msa0200250:intron | 20.0% |
| !! | TGATTAAAGTTCAAATGTAT+TGG | + | chr2_1:19930637-19930656 | Msa0200250:intron | 20.0% |
| !!! | TACCATTTTTATTTGCTTAA+AGG | + | chr2_1:19930742-19930761 | Msa0200250:intron | 20.0% |
| !! | TACCTTTAAGCAAATAAAAA+TGG | - | chr2_1:19930747-19930766 | None:intergenic | 20.0% |
| !! | CTTATTTGAGTAAAAAAACA+TGG | - | chr2_1:19930960-19930979 | None:intergenic | 20.0% |
| !! | GTTCAAATTACAAAGTTATA+TGG | + | chr2_1:19931131-19931150 | Msa0200250:intron | 20.0% |
| !! | TTGAACAATATATAAATGAG+AGG | + | chr2_1:19931297-19931316 | Msa0200250:intron | 20.0% |
| !!! | ACTTTAAGATATTTGGTATA+TGG | - | chr2_1:19931325-19931344 | None:intergenic | 20.0% |
| !! | ATATACCAAATATCTTAAAG+TGG | + | chr2_1:19931324-19931343 | Msa0200250:intron | 20.0% |
| !!! | AAATACCACTTTAAGATATT+TGG | - | chr2_1:19931332-19931351 | None:intergenic | 20.0% |
| !! | TTATACATCTTAGTATAGTT+GGG | + | chr2_1:19931624-19931643 | Msa0200250:intron | 20.0% |
| !! | ACTAACTTATTAAGTTAGTT+AGG | - | chr2_1:19931721-19931740 | None:intergenic | 20.0% |
| !! | TTAATAAGTTAGTTACTTGT+GGG | + | chr2_1:19931728-19931747 | Msa0200250:intron | 20.0% |
| !! | TGTAATTCAATCAATTAGTT+AGG | - | chr2_1:19931771-19931790 | None:intergenic | 20.0% |
| !!! | ATTTTAGTCAAAGTATTTGA+AGG | + | chr2_1:19931872-19931891 | Msa0200250:intron | 20.0% |
| !!! | TTTTAGTCAAAGTATTTGAA+GGG | + | chr2_1:19931873-19931892 | Msa0200250:intron | 20.0% |
| !!! | TTGTTTTATTTTATGGTAAG+GGG | - | chr2_1:19932140-19932159 | None:intergenic | 20.0% |
| !!! | TTGTTTTATTTTATGGTAAG+GGG | - | chr2_1:19932140-19932159 | None:intergenic | 20.0% |
| !!! | TTCTTGTGCTTTTAATTTTA+TGG | - | chr2_1:19932764-19932783 | None:intergenic | 20.0% |
| !! | ATATATCCAAAAAAATACGT+CGG | + | chr2_1:19933826-19933845 | Msa0200250:intron | 20.0% |
| !!! | TTGAAATGGGATTTTTTTTT+TGG | + | chr2_1:19934863-19934882 | Msa0200250:intron | 20.0% |
| !!! | TGAAATGGGATTTTTTTTTT+GGG | + | chr2_1:19934864-19934883 | Msa0200250:intron | 20.0% |
| !!! | TCGTTTTTCTTCTTTTTAAA+CGG | + | chr2_1:19935334-19935353 | Msa0200250:CDS | 20.0% |
| !! | GTAGTTTCAATTTCTTCTTT+TGG | - | chr2_1:19928012-19928031 | None:intergenic | 25.0% |
| ! | AAAAGGAATGAATATTAGGA+GGG | - | chr2_1:19928119-19928138 | None:intergenic | 25.0% |
| ! | AGTGAAAAGGAATGAATATT+AGG | - | chr2_1:19928123-19928142 | None:intergenic | 25.0% |
| !!! | TTTTCTTAATTTGTTGCTAC+AGG | + | chr2_1:19928219-19928238 | Msa0200250:intron | 25.0% |
| !! | TATTGTCTCAATTTTGCTAA+TGG | + | chr2_1:19928324-19928343 | Msa0200250:intron | 25.0% |
| !!! | TGATTAGTGACTTTTTTATG+AGG | + | chr2_1:19929012-19929031 | Msa0200250:intron | 25.0% |
| ! | TTAATTCTCTCGTATTAACT+GGG | + | chr2_1:19929443-19929462 | Msa0200250:intron | 25.0% |
| ! | GTAATATTTGTGTCTGAATA+TGG | + | chr2_1:19929757-19929776 | Msa0200250:intron | 25.0% |
| ! | ACTCAAATAATTGTTGTCAA+TGG | + | chr2_1:19929852-19929871 | Msa0200250:intron | 25.0% |
| ! | GTTAAAAAGTTGTTGCAAAA+TGG | + | chr2_1:19930085-19930104 | Msa0200250:intron | 25.0% |
| ! | ATTTCTCTATCATAAATGGT+AGG | + | chr2_1:19930121-19930140 | Msa0200250:intron | 25.0% |
| ! | TTACACGTGTGTATTTAAAA+TGG | + | chr2_1:19930287-19930306 | Msa0200250:intron | 25.0% |
| !!! | ATACATGTTTTTTTTGTGTG+TGG | - | chr2_1:19930343-19930362 | None:intergenic | 25.0% |
| !!! | CAAACTCAAGTTTTTTTTCT+TGG | - | chr2_1:19931034-19931053 | None:intergenic | 25.0% |
| !!! | TGTTTTTATAGGAGTTGAAA+TGG | - | chr2_1:19931071-19931090 | None:intergenic | 25.0% |
| ! | CACACTTTATATACTAACAA+GGG | - | chr2_1:19931243-19931262 | None:intergenic | 25.0% |
| ! | TCACACTTTATATACTAACA+AGG | - | chr2_1:19931244-19931263 | None:intergenic | 25.0% |
| ! | CTTATACATCTTAGTATAGT+TGG | + | chr2_1:19931623-19931642 | Msa0200250:intron | 25.0% |
| ! | CTTAATAAGTTAGTTACTTG+TGG | + | chr2_1:19931727-19931746 | Msa0200250:intron | 25.0% |
| !! | TTTCAGCTCTTTTTACTATT+TGG | - | chr2_1:19932605-19932624 | None:intergenic | 25.0% |
| !!! | TTTAATTTTATGGTCAACTC+TGG | - | chr2_1:19932754-19932773 | None:intergenic | 25.0% |
| ! | TCTGTTTATGAGAAATATCT+TGG | - | chr2_1:19932851-19932870 | None:intergenic | 25.0% |
| ! | ACAATAAAACATGATTGCAA+CGG | + | chr2_1:19932944-19932963 | Msa0200250:intron | 25.0% |
| !! | AATGTAATGACCAATTTTCT+GGG | - | chr2_1:19933806-19933825 | None:intergenic | 25.0% |
| !! | TAATGTAATGACCAATTTTC+TGG | - | chr2_1:19933807-19933826 | None:intergenic | 25.0% |
| !! | AACCATCTTTTAATGAAAGA+AGG | + | chr2_1:19934151-19934170 | Msa0200250:intron | 25.0% |
| !!! | AATTTTGGCATGTAATACAT+AGG | + | chr2_1:19934597-19934616 | Msa0200250:intron | 25.0% |
| ! | ATTACAACGTTAAAATCCAT+TGG | - | chr2_1:19934684-19934703 | None:intergenic | 25.0% |
| !!! | TTGCATTTGATTGATTTTTC+TGG | - | chr2_1:19934738-19934757 | None:intergenic | 25.0% |
| ! | GAAAAATCAATCAAATGCAA+TGG | + | chr2_1:19934738-19934757 | Msa0200250:intron | 25.0% |
| !!! | TTTTTTTTTGGGTATGGTTT+TGG | + | chr2_1:19934875-19934894 | Msa0200250:intron | 25.0% |
| ! | AAAAAAGGTGATGAATGAAT+AGG | + | chr2_1:19934900-19934919 | Msa0200250:intron | 25.0% |
| !! | CAACAAGACAATACAATTTT+TGG | - | chr2_1:19935231-19935250 | None:intergenic | 25.0% |
| ! | CAAAAATTGTATTGTCTTGT+TGG | + | chr2_1:19935229-19935248 | Msa0200250:intron | 25.0% |
| ! | GGTAATATATGTACTGTATT+TGG | + | chr2_1:19935250-19935269 | Msa0200250:intron | 25.0% |
| ! | AAAAGAAGAAAAACGAAAGA+AGG | - | chr2_1:19935330-19935349 | None:intergenic | 25.0% |
| !! | TTTTTCTTCTTTTTAAACGG+CGG | + | chr2_1:19935337-19935356 | Msa0200250:CDS | 25.0% |
| !!! | CCACTATTTTTACAATGAAT+TGG | - | chr2_1:19935553-19935572 | None:intergenic | 25.0% |
| ! | CCAATTCATTGTAAAAATAG+TGG | + | chr2_1:19935550-19935569 | Msa0200250:intron | 25.0% |
| ! | AATAAATAACAGGTACCAAA+CGG | + | chr2_1:19935780-19935799 | Msa0200250:intron | 25.0% |
| ! | CAAGTTTCAAAGTTATATGT+TGG | + | chr2_1:19935981-19936000 | Msa0200250:three_prime_UTR | 25.0% |
| !! | TATTGCTTGATATTTTTCCA+AGG | + | chr2_1:19936016-19936035 | Msa0200250:three_prime_UTR | 25.0% |
| !! | AGAGTCAATGAATTTTCATT+TGG | + | chr2_1:19936040-19936059 | Msa0200250:three_prime_UTR | 25.0% |
| ! | ATTGCATTCAAATATACCAA+AGG | - | chr2_1:19936206-19936225 | None:intergenic | 25.0% |
| AAGAAGAGTTTCTTATTGTC+TGG | - | chr2_1:19927945-19927964 | None:intergenic | 30.0% | |
| !! | TCTTTTGGTGTGCATATTTA+TGG | - | chr2_1:19927997-19928016 | None:intergenic | 30.0% |
| GAAAAGGAATGAATATTAGG+AGG | - | chr2_1:19928120-19928139 | None:intergenic | 30.0% | |
| ! | TATAATGCAGACCAACATTT+TGG | + | chr2_1:19928370-19928389 | Msa0200250:intron | 30.0% |
| TTAAGCAATGTGCATATGTA+AGG | - | chr2_1:19928438-19928457 | None:intergenic | 30.0% | |
| TACTATGGAACTATAAAAGC+TGG | + | chr2_1:19928474-19928493 | Msa0200250:CDS | 30.0% | |
| !! | ATATTCGTACCCTCATTTTT+GGG | - | chr2_1:19928581-19928600 | None:intergenic | 30.0% |
| ! | TATATTCGTACCCTCATTTT+TGG | - | chr2_1:19928582-19928601 | None:intergenic | 30.0% |
| CAACATAGTTCAAATATCCT+CGG | - | chr2_1:19928859-19928878 | None:intergenic | 30.0% | |
| ! | ACTATGTTGCTTGAATTTAG+AGG | + | chr2_1:19928870-19928889 | Msa0200250:intron | 30.0% |
| GATTACTACTCAATTAGCAT+TGG | + | chr2_1:19929142-19929161 | Msa0200250:CDS | 30.0% | |
| ! | GCTTTGAACATTCTTATGTA+TGG | + | chr2_1:19929206-19929225 | Msa0200250:CDS | 30.0% |
| GTTAATTCTCTCGTATTAAC+TGG | + | chr2_1:19929442-19929461 | Msa0200250:intron | 30.0% | |
| AATTTCTGTGGCAAATATGA+TGG | + | chr2_1:19929576-19929595 | Msa0200250:intron | 30.0% | |
| GATTATAAGAAGCCTGAAAT+TGG | - | chr2_1:19929606-19929625 | None:intergenic | 30.0% | |
| TATTTGTGTCTGAATATGGT+TGG | + | chr2_1:19929761-19929780 | Msa0200250:intron | 30.0% | |
| AATTGTTGTCAATGGTAAGT+TGG | + | chr2_1:19929860-19929879 | Msa0200250:intron | 30.0% | |
| ! | ACGTGTGTATTTAAAATGGT+CGG | + | chr2_1:19930291-19930310 | Msa0200250:intron | 30.0% |
| GTTCTTAGTTAATGAGTAGA+CGG | + | chr2_1:19930427-19930446 | Msa0200250:intron | 30.0% | |
| TTCTTAGTTAATGAGTAGAC+GGG | + | chr2_1:19930428-19930447 | Msa0200250:intron | 30.0% | |
| ATGAATCTAGATAAAACGAG+TGG | + | chr2_1:19930818-19930837 | Msa0200250:intron | 30.0% | |
| AGTAAGACTAATTCTTGATC+CGG | - | chr2_1:19931108-19931127 | None:intergenic | 30.0% | |
| AGATAGACAAGAGATAAATG+AGG | - | chr2_1:19931204-19931223 | None:intergenic | 30.0% | |
| ! | TGTGAGTAAGAGTCTTATAT+TGG | + | chr2_1:19931259-19931278 | Msa0200250:intron | 30.0% |
| ! | AGTAAGAGTCTTATATTGGT+TGG | + | chr2_1:19931263-19931282 | Msa0200250:intron | 30.0% |
| ! | TCTTATATTGGTTGGAAAAG+TGG | + | chr2_1:19931271-19931290 | Msa0200250:intron | 30.0% |
| GTCTAATATGATAATTCCTC+AGG | + | chr2_1:19931377-19931396 | Msa0200250:intron | 30.0% | |
| AGAGAAAAATGTTGAGTCAT+GGG | - | chr2_1:19931407-19931426 | None:intergenic | 30.0% | |
| TGCAAGCAACTAACTAAATA+AGG | - | chr2_1:19931688-19931707 | None:intergenic | 30.0% | |
| ! | ATTAAGTTAGTTAGGTTGCT+TGG | - | chr2_1:19931713-19931732 | None:intergenic | 30.0% |
| !!! | TTTTATTTTATGGTAAGGGG+AGG | - | chr2_1:19932137-19932156 | None:intergenic | 30.0% |
| !!! | TTTTATTTTATGGTAAGGGG+AGG | - | chr2_1:19932137-19932156 | None:intergenic | 30.0% |
| ! | TCCTACAAAACTGACTTATA+AGG | + | chr2_1:19932488-19932507 | Msa0200250:intron | 30.0% |
| !! | ACCTTATAAGTCAGTTTTGT+AGG | - | chr2_1:19932492-19932511 | None:intergenic | 30.0% |
| TGTGAAAATGCTTCATATTG+CGG | + | chr2_1:19932574-19932593 | Msa0200250:intron | 30.0% | |
| ! | AGCTCTTTTTACTATTTGGA+AGG | - | chr2_1:19932601-19932620 | None:intergenic | 30.0% |
| AAAAGACAAATGAGACTTGT+TGG | + | chr2_1:19932638-19932657 | Msa0200250:intron | 30.0% | |
| ! | TTTGAGCATTTTCTTCTGTT+TGG | - | chr2_1:19932681-19932700 | None:intergenic | 30.0% |
| ! | GCTTTTAATATCAGATGGTT+AGG | - | chr2_1:19932732-19932751 | None:intergenic | 30.0% |
| AATGAGATTGTTTGCTTGAA+AGG | - | chr2_1:19933124-19933143 | None:intergenic | 30.0% | |
| ATGTTGATGTTTATGATTGC+TGG | - | chr2_1:19933589-19933608 | None:intergenic | 30.0% | |
| GTTAAACGTTAACGCAATAT+CGG | - | chr2_1:19933650-19933669 | None:intergenic | 30.0% | |
| ! | GTGTAATGTTTTGCATAATG+TGG | - | chr2_1:19933698-19933717 | None:intergenic | 30.0% |
| CATTATATCACCCAGAAAAT+TGG | + | chr2_1:19933793-19933812 | Msa0200250:intron | 30.0% | |
| ! | AGATGAAATGTGACACTTTT+AGG | - | chr2_1:19933884-19933903 | None:intergenic | 30.0% |
| TTCCAGAACATCTTCAAATT+CGG | + | chr2_1:19933927-19933946 | Msa0200250:intron | 30.0% | |
| ! | AATTATGTTTGATGACACTC+CGG | - | chr2_1:19933965-19933984 | None:intergenic | 30.0% |
| ATTGGATTGTCTTCATTTGT+TGG | + | chr2_1:19933982-19934001 | Msa0200250:intron | 30.0% | |
| GTCCTTCTTTCATTAAAAGA+TGG | - | chr2_1:19934156-19934175 | None:intergenic | 30.0% | |
| AAAGAAGGACAAAATGATCT+AGG | + | chr2_1:19934166-19934185 | Msa0200250:intron | 30.0% | |
| ! | ATGGATGGTATCATGAATTT+TGG | + | chr2_1:19934582-19934601 | Msa0200250:intron | 30.0% |
| ATGTAATACATAGGATTGGA+TGG | + | chr2_1:19934606-19934625 | Msa0200250:intron | 30.0% | |
| !!! | TGGGATTTTTTTTTTGGGTA+TGG | + | chr2_1:19934869-19934888 | Msa0200250:intron | 30.0% |
| !!! | TGAGAGTTGTTTTTTTGACA+AGG | - | chr2_1:19935080-19935099 | None:intergenic | 30.0% |
| TGGTTGTAACTTTCAGAAAA+CGG | + | chr2_1:19935270-19935289 | Msa0200250:intron | 30.0% | |
| AAGAAAAACGAAAGAAGGAA+TGG | - | chr2_1:19935325-19935344 | None:intergenic | 30.0% | |
| ! | ATCAAGATAATAAGAGCACA+TGG | - | chr2_1:19935425-19935444 | None:intergenic | 30.0% |
| GCACATCAAATGTAAAATTG+TGG | - | chr2_1:19935654-19935673 | None:intergenic | 30.0% | |
| GAAGCATAGTTCAAACAAAT+TGG | + | chr2_1:19935869-19935888 | Msa0200250:CDS | 30.0% | |
| AGTTCAAACAAATTGGAAGA+AGG | + | chr2_1:19935876-19935895 | Msa0200250:CDS | 30.0% | |
| TGAAAGCAAAATGACTAGAT+AGG | - | chr2_1:19935963-19935982 | None:intergenic | 30.0% | |
| !! | AAAATTCATTGACTCTTCCT+TGG | - | chr2_1:19936036-19936055 | None:intergenic | 30.0% |
| TCTTAAAATCTGGGCATATA+AGG | - | chr2_1:19936182-19936201 | None:intergenic | 30.0% | |
| ACTTCAACATACATCAATTC+TGG | - | chr2_1:19936267-19936286 | None:intergenic | 30.0% | |
| ! | CTTGTTTCTTAGTTTCCTCA+TGG | + | chr2_1:19928043-19928062 | Msa0200250:exon | 35.0% |
| ACAACTCCAACAAAGAAACT+TGG | - | chr2_1:19928074-19928093 | None:intergenic | 35.0% | |
| AGTTTCTTTGTTGGAGTTGT+AGG | + | chr2_1:19928074-19928093 | Msa0200250:CDS | 35.0% | |
| GTTAGTGCAAAAGAGTGAAA+AGG | - | chr2_1:19928136-19928155 | None:intergenic | 35.0% | |
| ! | CTCTTTTGCACTAACCTTAA+TGG | + | chr2_1:19928141-19928160 | Msa0200250:intron | 35.0% |
| TTTGCACTAACCTTAATGGA+TGG | + | chr2_1:19928145-19928164 | Msa0200250:intron | 35.0% | |
| AAGATTGGTACCATCCATTA+AGG | - | chr2_1:19928158-19928177 | None:intergenic | 35.0% | |
| TATTGATCCATGCCCAAAAA+TGG | + | chr2_1:19928178-19928197 | Msa0200250:intron | 35.0% | |
| !! | GAAATTTCCATTTTTGGGCA+TGG | - | chr2_1:19928188-19928207 | None:intergenic | 35.0% |
| CATTGCTTAACTCTTCATTG+TGG | + | chr2_1:19928448-19928467 | Msa0200250:CDS | 35.0% | |
| TCTTCATTGTGGACTTACTA+TGG | + | chr2_1:19928459-19928478 | Msa0200250:CDS | 35.0% | |
| !! | TATTCGTACCCTCATTTTTG+GGG | - | chr2_1:19928580-19928599 | None:intergenic | 35.0% |
| ! | TGACATTTTACAATGTTCCG+AGG | + | chr2_1:19928839-19928858 | Msa0200250:intron | 35.0% |
| ! | TACTACTCAATTAGCATTGG+AGG | + | chr2_1:19929145-19929164 | Msa0200250:CDS | 35.0% |
| ! | ACTACTCAATTAGCATTGGA+GGG | + | chr2_1:19929146-19929165 | Msa0200250:CDS | 35.0% |
| TTCATGTTATAGGCCAATCA+AGG | + | chr2_1:19929376-19929395 | Msa0200250:intron | 35.0% | |
| !! | TATGATGGACAACCAATTTC+AGG | + | chr2_1:19929591-19929610 | Msa0200250:intron | 35.0% |
| TGTCTATAGAGATGCTTGAA+AGG | + | chr2_1:19929634-19929653 | Msa0200250:intron | 35.0% | |
| ATATCTTTCCCCCAAATAAG+TGG | + | chr2_1:19929898-19929917 | Msa0200250:intron | 35.0% | |
| GTCGTAAAAGTTGTCACTAA+TGG | - | chr2_1:19929968-19929987 | None:intergenic | 35.0% | |
| AATTCTACATAGCTGTGTGA+TGG | - | chr2_1:19930262-19930281 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTCTTGGAGAGAG+TGG | - | chr2_1:19931025-19931044 | None:intergenic | 35.0% |
| GTAAGACTAATTCTTGATCC+GGG | - | chr2_1:19931107-19931126 | None:intergenic | 35.0% | |
| AGAAAAATGTTGAGTCATGG+GGG | - | chr2_1:19931405-19931424 | None:intergenic | 35.0% | |
| GAGAAAAATGTTGAGTCATG+GGG | - | chr2_1:19931406-19931425 | None:intergenic | 35.0% | |
| CAGAGAAAAATGTTGAGTCA+TGG | - | chr2_1:19931408-19931427 | None:intergenic | 35.0% | |
| ! | AGGGAAAGTCTTTAAGTTCT+TGG | + | chr2_1:19931561-19931580 | Msa0200250:intron | 35.0% |
| TAGTTGGGTTTACAAGTCAT+TGG | + | chr2_1:19931639-19931658 | Msa0200250:intron | 35.0% | |
| !! | AACGACATTCACTTTAAGAC+AGG | - | chr2_1:19931845-19931864 | None:intergenic | 35.0% |
| TTTGAACCATCTAACTTCGA+TGG | - | chr2_1:19931953-19931972 | None:intergenic | 35.0% | |
| GGTATGCAAAAACAAGATTG+AGG | - | chr2_1:19932090-19932109 | None:intergenic | 35.0% | |
| GGTATGCAAAAACAAGATTG+AGG | - | chr2_1:19932090-19932109 | None:intergenic | 35.0% | |
| !!! | ATCCCTTAGTCTTTGGTTTT+TGG | + | chr2_1:19932419-19932438 | Msa0200250:intron | 35.0% |
| AGCCAAAAACCAAAGACTAA+GGG | - | chr2_1:19932424-19932443 | None:intergenic | 35.0% | |
| !! | AGAGTCTTATTTATCCGATG+TGG | + | chr2_1:19932543-19932562 | Msa0200250:intron | 35.0% |
| !! | GAGTCTTATTTATCCGATGT+GGG | + | chr2_1:19932544-19932563 | Msa0200250:intron | 35.0% |
| !! | TTCACATTTTAGTCCCACAT+CGG | - | chr2_1:19932560-19932579 | None:intergenic | 35.0% |
| !!! | CTCTGGCTTTTAATATCAGA+TGG | - | chr2_1:19932737-19932756 | None:intergenic | 35.0% |
| ! | TCATTTGATTAGTTCGGATG+TGG | - | chr2_1:19932980-19932999 | None:intergenic | 35.0% |
| TCATTCTTCTCACATGTACA+TGG | - | chr2_1:19933019-19933038 | None:intergenic | 35.0% | |
| AGATTGTTTGCTTGAAAGGA+GGG | - | chr2_1:19933120-19933139 | None:intergenic | 35.0% | |
| TCTTTGGATTGAGAGGTTAA+TGG | - | chr2_1:19933164-19933183 | None:intergenic | 35.0% | |
| GAATACTTCCTATTGACACA+TGG | + | chr2_1:19933352-19933371 | Msa0200250:intron | 35.0% | |
| AAACCAGTTACAAACTACAC+TGG | - | chr2_1:19933489-19933508 | None:intergenic | 35.0% | |
| ! | TTTGAAATTACAGGTCGAAC+AGG | - | chr2_1:19933528-19933547 | None:intergenic | 35.0% |
| GTTCGACCTGTAATTTCAAA+CGG | + | chr2_1:19933528-19933547 | Msa0200250:intron | 35.0% | |
| ! | GAATTGCCGTTTGAAATTAC+AGG | - | chr2_1:19933537-19933556 | None:intergenic | 35.0% |
| GTAATTTCAAACGGCAATTC+CGG | + | chr2_1:19933537-19933556 | Msa0200250:intron | 35.0% | |
| !! | ATTGCTGGATGTTGTTGTTT+CGG | - | chr2_1:19933574-19933593 | None:intergenic | 35.0% |
| !! | GAAATGTGACACTTTTAGGT+CGG | - | chr2_1:19933880-19933899 | None:intergenic | 35.0% |
| !! | AATTCGGTGTTTGCTTTAAC+CGG | + | chr2_1:19933943-19933962 | Msa0200250:intron | 35.0% |
| ! | GGAGTGTCATCAAACATAAT+TGG | + | chr2_1:19933964-19933983 | Msa0200250:intron | 35.0% |
| ! | AACATGGGAGGATGAATTTT+TGG | - | chr2_1:19934076-19934095 | None:intergenic | 35.0% |
| ! | AATGATCTAGGATTAGACCA+AGG | + | chr2_1:19934178-19934197 | Msa0200250:intron | 35.0% |
| ! | AAAAGCAACATGATTTGCCT+TGG | - | chr2_1:19934198-19934217 | None:intergenic | 35.0% |
| !!! | AGGCAAATCATGTTGCTTTT+CGG | + | chr2_1:19934198-19934217 | Msa0200250:intron | 35.0% |
| TCTAAGTGGGAAAAAAGTCT+CGG | + | chr2_1:19934239-19934258 | Msa0200250:intron | 35.0% | |
| TCGTTGCATCATGTTACAAT+AGG | - | chr2_1:19934302-19934321 | None:intergenic | 35.0% | |
| ! | TGCAAAGCTACTAGGATTTT+TGG | + | chr2_1:19934362-19934381 | Msa0200250:intron | 35.0% |
| ! | GCAAAGCTACTAGGATTTTT+GGG | + | chr2_1:19934363-19934382 | Msa0200250:intron | 35.0% |
| CATCCAAGATGTAGTTGTAA+CGG | + | chr2_1:19934397-19934416 | Msa0200250:intron | 35.0% | |
| ! | TTCAAGAGTTGAAAGAGCAT+AGG | - | chr2_1:19934455-19934474 | None:intergenic | 35.0% |
| AAGAAAGTCATGTTATGGTG+CGG | - | chr2_1:19934488-19934507 | None:intergenic | 35.0% | |
| TGGCATGTAATACATAGGAT+TGG | + | chr2_1:19934602-19934621 | Msa0200250:intron | 35.0% | |
| !! | TAACTTGTTGAAACCAAGCT+AGG | + | chr2_1:19934633-19934652 | Msa0200250:intron | 35.0% |
| AAAATCCATTGGCATTTCTC+CGG | - | chr2_1:19934673-19934692 | None:intergenic | 35.0% | |
| !!! | GGTATGGTTTTGGTGAAAAA+AGG | + | chr2_1:19934885-19934904 | Msa0200250:intron | 35.0% |
| ATGAATGAATAGGTGAGGTA+GGG | + | chr2_1:19934910-19934929 | Msa0200250:intron | 35.0% | |
| AGTCATTTCCATGTGTCAAT+TGG | + | chr2_1:19935047-19935066 | Msa0200250:intron | 35.0% | |
| GAATACTTCCAATTGACACA+TGG | - | chr2_1:19935058-19935077 | None:intergenic | 35.0% | |
| TTGTAACTTTCAGAAAACGG+TGG | + | chr2_1:19935273-19935292 | Msa0200250:intron | 35.0% | |
| TTGTTCGTGATTCCATTCTT+GGG | + | chr2_1:19935383-19935402 | Msa0200250:CDS | 35.0% | |
| CTATACAGTTAGTGTTGCAT+GGG | + | chr2_1:19935823-19935842 | Msa0200250:CDS | 35.0% | |
| CAAACAAATTGGAAGAAGGA+TGG | + | chr2_1:19935880-19935899 | Msa0200250:CDS | 35.0% | |
| ACCAAAGGCTCTTAAAATCT+GGG | - | chr2_1:19936191-19936210 | None:intergenic | 35.0% | |
| TACCAAAGGCTCTTAAAATC+TGG | - | chr2_1:19936192-19936211 | None:intergenic | 35.0% | |
| TAGGCAGAAGAGTGAGAATA+AGG | - | chr2_1:19927973-19927992 | None:intergenic | 40.0% | |
| TGGTGTGCATATTTATGGCT+AGG | - | chr2_1:19927992-19928011 | None:intergenic | 40.0% | |
| GCAGATCCAAGTTTCTTTGT+TGG | + | chr2_1:19928065-19928084 | Msa0200250:CDS | 40.0% | |
| GGGCATGGATCAATAAAGAT+TGG | - | chr2_1:19928173-19928192 | None:intergenic | 40.0% | |
| AGAGTGTAAAGAGCTTACAC+AGG | - | chr2_1:19928276-19928295 | None:intergenic | 40.0% | |
| AAAAGCTGGAGAATACCTTG+TGG | + | chr2_1:19928488-19928507 | Msa0200250:CDS | 40.0% | |
| TATATGCACCCCCAAAAATG+AGG | + | chr2_1:19928568-19928587 | Msa0200250:CDS | 40.0% | |
| ATATGCACCCCCAAAAATGA+GGG | + | chr2_1:19928569-19928588 | Msa0200250:CDS | 40.0% | |
| !! | ATTCGTACCCTCATTTTTGG+GGG | - | chr2_1:19928579-19928598 | None:intergenic | 40.0% |
| TGAAGACTGCAATTCTTGCT+GGG | + | chr2_1:19929087-19929106 | Msa0200250:CDS | 40.0% | |
| ! | TGCAATTCTTGCTGGGATTT+TGG | + | chr2_1:19929094-19929113 | Msa0200250:CDS | 40.0% |
| AAACTTACCATGACAGCAAG+AGG | - | chr2_1:19929236-19929255 | None:intergenic | 40.0% | |
| TTGCTGTCATGGTAAGTTTC+TGG | + | chr2_1:19929237-19929256 | Msa0200250:intron | 40.0% | |
| ATGTTATAGGCCAATCAAGG+TGG | + | chr2_1:19929379-19929398 | Msa0200250:intron | 40.0% | |
| ATTCTCTCGTATTAACTGGG+AGG | + | chr2_1:19929446-19929465 | Msa0200250:intron | 40.0% | |
| CTTGTCGCATACTGATACTT+TGG | + | chr2_1:19929786-19929805 | Msa0200250:intron | 40.0% | |
| TTCCCGAGAACCACTTATTT+GGG | - | chr2_1:19929911-19929930 | None:intergenic | 40.0% | |
| ACTCTATTAGTACTGTCCCA+CGG | + | chr2_1:19930145-19930164 | Msa0200250:intron | 40.0% | |
| TGTTGACAATGCTTGCTTGA+TGG | + | chr2_1:19930206-19930225 | Msa0200250:intron | 40.0% | |
| CTAGATAAAACGAGTGGCAA+AGG | + | chr2_1:19930824-19930843 | Msa0200250:intron | 40.0% | |
| ATAAAACGAGTGGCAAAGGA+TGG | + | chr2_1:19930828-19930847 | Msa0200250:intron | 40.0% | |
| TAAAACGAGTGGCAAAGGAT+GGG | + | chr2_1:19930829-19930848 | Msa0200250:intron | 40.0% | |
| TCTCAACACTTTGTAGTGTG+GGG | - | chr2_1:19930990-19931009 | None:intergenic | 40.0% | |
| CTCTCAACACTTTGTAGTGT+GGG | - | chr2_1:19930991-19931010 | None:intergenic | 40.0% | |
| TCTCTCAACACTTTGTAGTG+TGG | - | chr2_1:19930992-19931011 | None:intergenic | 40.0% | |
| !! | CTACAAAGTGTTGAGAGAGT+TGG | + | chr2_1:19930994-19931013 | Msa0200250:intron | 40.0% |
| !! | CGGGACATCGATGTTTTTAT+AGG | - | chr2_1:19931082-19931101 | None:intergenic | 40.0% |
| ACTAATTCTTGATCCGGGAA+CGG | - | chr2_1:19931102-19931121 | None:intergenic | 40.0% | |
| !! | GATGCTTTAGAGCGTCTATT+GGG | + | chr2_1:19931153-19931172 | Msa0200250:intron | 40.0% |
| ACTATGAGCAATCACACAAG+TGG | - | chr2_1:19931359-19931378 | None:intergenic | 40.0% | |
| TGTTTCTCTCGTTCTCTCTT+TGG | - | chr2_1:19931533-19931552 | None:intergenic | 40.0% | |
| ACGAGAGAAACAGAAGAAGT+AGG | + | chr2_1:19931541-19931560 | Msa0200250:intron | 40.0% | |
| CGAGAGAAACAGAAGAAGTA+GGG | + | chr2_1:19931542-19931561 | Msa0200250:intron | 40.0% | |
| TTGCATGCAGATAATGACTG+CGG | - | chr2_1:19931910-19931929 | None:intergenic | 40.0% | |
| GCATGCAATAAGTGATTGTG+TGG | + | chr2_1:19931922-19931941 | Msa0200250:intron | 40.0% | |
| GCATTTCCATCGAAGTTAGA+TGG | + | chr2_1:19931944-19931963 | Msa0200250:intron | 40.0% | |
| ! | TATTTTATGGTAAGGGGAGG+TGG | - | chr2_1:19932134-19932153 | None:intergenic | 40.0% |
| !!! | ATCCCTCAGTCTTTGGTTTT+TGG | + | chr2_1:19932196-19932215 | Msa0200250:intron | 40.0% |
| AGCCAAAAACCAAAGACTGA+GGG | - | chr2_1:19932201-19932220 | None:intergenic | 40.0% | |
| ! | TTGTTTCTTGACATCGGTCA+TGG | - | chr2_1:19932334-19932353 | None:intergenic | 40.0% |
| !! | AGGTGGTTGTTTCTTGACAT+CGG | - | chr2_1:19932340-19932359 | None:intergenic | 40.0% |
| ! | TATTTTATGGTAAGGGGAGG+TGG | - | chr2_1:19932134-19932153 | None:intergenic | 40.0% |
| AACCAAAGACTAAGGGATGT+GGG | - | chr2_1:19932417-19932436 | None:intergenic | 40.0% | |
| AAACCAAAGACTAAGGGATG+TGG | - | chr2_1:19932418-19932437 | None:intergenic | 40.0% | |
| GAGCCAAAAACCAAAGACTA+AGG | - | chr2_1:19932425-19932444 | None:intergenic | 40.0% | |
| TTCTTCTGTTTGGAGGTCTT+GGG | - | chr2_1:19932671-19932690 | None:intergenic | 40.0% | |
| TTTCTTCTGTTTGGAGGTCT+TGG | - | chr2_1:19932672-19932691 | None:intergenic | 40.0% | |
| ! | GAGCATTTTCTTCTGTTTGG+AGG | - | chr2_1:19932678-19932697 | None:intergenic | 40.0% |
| !! | TCTTTTTGTTTGACCGCTTG+TGG | - | chr2_1:19932817-19932836 | None:intergenic | 40.0% |
| !! | AGGTTGATGTGTCTTACAAG+TGG | - | chr2_1:19933053-19933072 | None:intergenic | 40.0% |
| GATTGTTTGCTTGAAAGGAG+GGG | - | chr2_1:19933119-19933138 | None:intergenic | 40.0% | |
| GAGATTGTTTGCTTGAAAGG+AGG | - | chr2_1:19933121-19933140 | None:intergenic | 40.0% | |
| GATGTTCTCTTTGGATTGAG+AGG | - | chr2_1:19933171-19933190 | None:intergenic | 40.0% | |
| TGTCGCATAGATGTTCTCTT+TGG | - | chr2_1:19933180-19933199 | None:intergenic | 40.0% | |
| GGTCATTTCCATGTGTCAAT+AGG | - | chr2_1:19933363-19933382 | None:intergenic | 40.0% | |
| AATGACCAAAATACCCCCAT+CGG | + | chr2_1:19933376-19933395 | Msa0200250:intron | 40.0% | |
| !! | AACTACACTGGTTCTGTAAC+TGG | - | chr2_1:19933477-19933496 | None:intergenic | 40.0% |
| ! | GAACCAGTGTAGTTTGTAAC+TGG | + | chr2_1:19933483-19933502 | Msa0200250:intron | 40.0% |
| ! | TGTTTCGGTTTGATTTCCTC+CGG | - | chr2_1:19933559-19933578 | None:intergenic | 40.0% |
| !! | TCGGTTTGGTGTAATGTAAC+CGG | - | chr2_1:19933631-19933650 | None:intergenic | 40.0% |
| ! | ACGTTAACGCAATATCGGTT+TGG | - | chr2_1:19933645-19933664 | None:intergenic | 40.0% |
| !!! | GTCGGTGTTAATCCGTTTTT+TGG | - | chr2_1:19933862-19933881 | None:intergenic | 40.0% |
| CACCGAATTTGAAGATGTTC+TGG | - | chr2_1:19933932-19933951 | None:intergenic | 40.0% | |
| !! | TCTTCATTTGTTGGCTCCTT+TGG | + | chr2_1:19933991-19934010 | Msa0200250:intron | 40.0% |
| CATTGAGCTCAAATAGAGAC+CGG | - | chr2_1:19934022-19934041 | None:intergenic | 40.0% | |
| !! | GGATGAATTTTTGGATCGAC+AGG | - | chr2_1:19934067-19934086 | None:intergenic | 40.0% |
| !!! | GGCAAATCATGTTGCTTTTC+GGG | + | chr2_1:19934199-19934218 | Msa0200250:intron | 40.0% |
| !!! | ATGTTGCTTTTCGGGTTAAC+CGG | + | chr2_1:19934207-19934226 | Msa0200250:intron | 40.0% |
| !!! | CTTTTTTCCCACTTAGAGGA+CGG | - | chr2_1:19934236-19934255 | None:intergenic | 40.0% |
| !!! | GAGACTTTTTTCCCACTTAG+AGG | - | chr2_1:19934240-19934259 | None:intergenic | 40.0% |
| CATGTAGTCATCTCTAACAC+CGG | + | chr2_1:19934276-19934295 | Msa0200250:intron | 40.0% | |
| TGCATCATGTTACAATAGGC+CGG | - | chr2_1:19934298-19934317 | None:intergenic | 40.0% | |
| !! | AAGCTACTAGGATTTTTGGG+AGG | + | chr2_1:19934366-19934385 | Msa0200250:intron | 40.0% |
| CGTTACAACTACATCTTGGA+TGG | - | chr2_1:19934399-19934418 | None:intergenic | 40.0% | |
| GAACCGTTACAACTACATCT+TGG | - | chr2_1:19934403-19934422 | None:intergenic | 40.0% | |
| GCATAGGAGCAAATACATTG+AGG | - | chr2_1:19934439-19934458 | None:intergenic | 40.0% | |
| GACGCAAGAAAGTCATGTTA+TGG | - | chr2_1:19934493-19934512 | None:intergenic | 40.0% | |
| !! | TTATTGGTGACGGTCATTGT+GGG | - | chr2_1:19934545-19934564 | None:intergenic | 40.0% |
| GTTGTGGATGTTATTGGTGA+CGG | - | chr2_1:19934555-19934574 | None:intergenic | 40.0% | |
| GAGAGAGTTGTGGATGTTAT+TGG | - | chr2_1:19934561-19934580 | None:intergenic | 40.0% | |
| AACATCCACAACTCTCTCAA+TGG | + | chr2_1:19934563-19934582 | Msa0200250:intron | 40.0% | |
| GCAATCGATCAGCAATGATT+TGG | + | chr2_1:19934816-19934835 | Msa0200250:intron | 40.0% | |
| AGGTGATGAATGAATAGGTG+AGG | + | chr2_1:19934905-19934924 | Msa0200250:intron | 40.0% | |
| GATGAATGAATAGGTGAGGT+AGG | + | chr2_1:19934909-19934928 | Msa0200250:intron | 40.0% | |
| TGAATGAATAGGTGAGGTAG+GGG | + | chr2_1:19934911-19934930 | Msa0200250:intron | 40.0% | |
| CTTGTTCGTGATTCCATTCT+TGG | + | chr2_1:19935382-19935401 | Msa0200250:CDS | 40.0% | |
| TGTTCGTGATTCCATTCTTG+GGG | + | chr2_1:19935384-19935403 | Msa0200250:CDS | 40.0% | |
| AGTACAAATCCAGTACCGTT+TGG | - | chr2_1:19935798-19935817 | None:intergenic | 40.0% | |
| ! | AACGGTACTGGATTTGTACT+TGG | + | chr2_1:19935798-19935817 | Msa0200250:CDS | 40.0% |
| GCTATACAGTTAGTGTTGCA+TGG | + | chr2_1:19935822-19935841 | Msa0200250:CDS | 40.0% | |
| TTGCATGGGATTTACAGAGA+TGG | + | chr2_1:19935837-19935856 | Msa0200250:CDS | 40.0% | |
| ATCATGTGACTGAGTAGTTG+AGG | - | chr2_1:19935928-19935947 | None:intergenic | 40.0% | |
| GCAGAAGAGTGAGAATAAGG+TGG | - | chr2_1:19927970-19927989 | None:intergenic | 45.0% | |
| AGAAACTTGGATCTGCCATG+AGG | - | chr2_1:19928061-19928080 | None:intergenic | 45.0% | |
| TACCTTGTGGCCACTGTTAA+TGG | + | chr2_1:19928501-19928520 | Msa0200250:CDS | 45.0% | |
| GATGCCAAAGCCATTAACAG+TGG | - | chr2_1:19928514-19928533 | None:intergenic | 45.0% | |
| !! | TGTTAATGGCTTTGGCATCG+TGG | + | chr2_1:19928515-19928534 | Msa0200250:CDS | 45.0% |
| GTGAAGACTGCAATTCTTGC+TGG | + | chr2_1:19929086-19929105 | Msa0200250:CDS | 45.0% | |
| ! | GATTTTGGACGTGGTGATCT+TGG | + | chr2_1:19929109-19929128 | Msa0200250:CDS | 45.0% |
| !! | TAGTGGTGCTGTTGGTATCA+TGG | + | chr2_1:19929178-19929197 | Msa0200250:CDS | 45.0% |
| !! | AGTGGTGCTGTTGGTATCAT+GGG | + | chr2_1:19929179-19929198 | Msa0200250:CDS | 45.0% |
| ! | GGATCTAAGACCACCTTGAT+TGG | - | chr2_1:19929392-19929411 | None:intergenic | 45.0% |
| TCCCCCAAATAAGTGGTTCT+CGG | + | chr2_1:19929905-19929924 | Msa0200250:intron | 45.0% | |
| TCCCGAGAACCACTTATTTG+GGG | - | chr2_1:19929910-19929929 | None:intergenic | 45.0% | |
| GTTCCCGAGAACCACTTATT+TGG | - | chr2_1:19929912-19929931 | None:intergenic | 45.0% | |
| CTCTATTAGTACTGTCCCAC+GGG | + | chr2_1:19930146-19930165 | Msa0200250:intron | 45.0% | |
| TCTATTAGTACTGTCCCACG+GGG | + | chr2_1:19930147-19930166 | Msa0200250:intron | 45.0% | |
| GAGAAAAAAATGTGCCCCGT+GGG | - | chr2_1:19930164-19930183 | None:intergenic | 45.0% | |
| TGAGAAAAAAATGTGCCCCG+TGG | - | chr2_1:19930165-19930184 | None:intergenic | 45.0% | |
| ! | CTACATAGCTGTGTGATGGA+TGG | - | chr2_1:19930258-19930277 | None:intergenic | 45.0% |
| CTCAACACTTTGTAGTGTGG+GGG | - | chr2_1:19930989-19931008 | None:intergenic | 45.0% | |
| CTAATTCTTGATCCGGGAAC+GGG | - | chr2_1:19931101-19931120 | None:intergenic | 45.0% | |
| !! | GGATGCTTTAGAGCGTCTAT+TGG | + | chr2_1:19931152-19931171 | Msa0200250:intron | 45.0% |
| TGTGGGGGTGATGAAAGAAA+GGG | - | chr2_1:19932177-19932196 | None:intergenic | 45.0% | |
| ATGTGGGGGTGATGAAAGAA+AGG | - | chr2_1:19932178-19932197 | None:intergenic | 45.0% | |
| AACCAAAGACTGAGGGATGT+GGG | - | chr2_1:19932194-19932213 | None:intergenic | 45.0% | |
| AAACCAAAGACTGAGGGATG+TGG | - | chr2_1:19932195-19932214 | None:intergenic | 45.0% | |
| GAGCCAAAAACCAAAGACTG+AGG | - | chr2_1:19932202-19932221 | None:intergenic | 45.0% | |
| TGTGGGGGTGATGAAAGAAA+GGG | - | chr2_1:19932177-19932196 | None:intergenic | 45.0% | |
| ATGTGGGGGTGATGAAAGAA+AGG | - | chr2_1:19932178-19932197 | None:intergenic | 45.0% | |
| ACCAAAGACTAAGGGATGTG+GGG | - | chr2_1:19932416-19932435 | None:intergenic | 45.0% | |
| TCTTCTGTTTGGAGGTCTTG+GGG | - | chr2_1:19932670-19932689 | None:intergenic | 45.0% | |
| CAGATGGTTAGGCATCTCAA+TGG | - | chr2_1:19932721-19932740 | None:intergenic | 45.0% | |
| AACCTCAACCAATCCACAAG+CGG | + | chr2_1:19932801-19932820 | Msa0200250:intron | 45.0% | |
| TTGTTTGACCGCTTGTGGAT+TGG | - | chr2_1:19932812-19932831 | None:intergenic | 45.0% | |
| !! | GCTTTCACTTGTGGTTTTGC+AGG | - | chr2_1:19933073-19933092 | None:intergenic | 45.0% |
| TTGAAAGGAGGGGTTTGTGA+GGG | - | chr2_1:19933109-19933128 | None:intergenic | 45.0% | |
| GTTAATGGTGAGAGTGGAAG+TGG | - | chr2_1:19933149-19933168 | None:intergenic | 45.0% | |
| TGAGAGGTTAATGGTGAGAG+TGG | - | chr2_1:19933155-19933174 | None:intergenic | 45.0% | |
| !!! | AACAACCGATGGGGGTATTT+TGG | - | chr2_1:19933384-19933403 | None:intergenic | 45.0% |
| !!! | GTTTGTAACTGGTTTTGCCC+AGG | + | chr2_1:19933494-19933513 | Msa0200250:intron | 45.0% |
| TCGAACAGGACACATTTCCT+GGG | - | chr2_1:19933514-19933533 | None:intergenic | 45.0% | |
| ATTTCAAACGGCAATTCCGG+AGG | + | chr2_1:19933540-19933559 | Msa0200250:intron | 45.0% | |
| !!! | TACGCGCCGACGTATTTTTT+TGG | - | chr2_1:19933835-19933854 | None:intergenic | 45.0% |
| GGCGCGTATCAACCAAAAAA+CGG | + | chr2_1:19933847-19933866 | Msa0200250:intron | 45.0% | |
| !! | TCATTTGTTGGCTCCTTTGG+TGG | + | chr2_1:19933994-19934013 | Msa0200250:intron | 45.0% |
| GCTCAATGTCCATGAGTGTT+TGG | + | chr2_1:19934034-19934053 | Msa0200250:intron | 45.0% | |
| GGATCGTTTCCAAACACTCA+TGG | - | chr2_1:19934046-19934065 | None:intergenic | 45.0% | |
| ! | CGGTGTTAGAGATGACTACA+TGG | - | chr2_1:19934278-19934297 | None:intergenic | 45.0% |
| TGGTTGACATTGCCGGATAT+GGG | - | chr2_1:19934330-19934349 | None:intergenic | 45.0% | |
| ATGGTTGACATTGCCGGATA+TGG | - | chr2_1:19934331-19934350 | None:intergenic | 45.0% | |
| CGACAAATGGTTGACATTGC+CGG | - | chr2_1:19934337-19934356 | None:intergenic | 45.0% | |
| CGGCAATGTCAACCATTTGT+CGG | + | chr2_1:19934335-19934354 | Msa0200250:intron | 45.0% | |
| GGCAATGTCAACCATTTGTC+GGG | + | chr2_1:19934336-19934355 | Msa0200250:intron | 45.0% | |
| AATGTCAACCATTTGTCGGG+AGG | + | chr2_1:19934339-19934358 | Msa0200250:intron | 45.0% | |
| ACTTTCTTGCGTCAAACCCA+AGG | + | chr2_1:19934500-19934519 | Msa0200250:intron | 45.0% | |
| ! | TTGTGGGTTTAGGGCTATAG+CGG | - | chr2_1:19934529-19934548 | None:intergenic | 45.0% |
| TGACGGTCATTGTGGGTTTA+GGG | - | chr2_1:19934538-19934557 | None:intergenic | 45.0% | |
| !! | GTTATTGGTGACGGTCATTG+TGG | - | chr2_1:19934546-19934565 | None:intergenic | 45.0% |
| TCCACAACTCTCTCAATGGA+TGG | + | chr2_1:19934567-19934586 | Msa0200250:intron | 45.0% | |
| ACCATCCATTGAGAGAGTTG+TGG | - | chr2_1:19934571-19934590 | None:intergenic | 45.0% | |
| GTTGAAACCAAGCTAGGCTT+AGG | + | chr2_1:19934639-19934658 | Msa0200250:intron | 45.0% | |
| !!! | AGGTAGGGGTTTCTGGTTTT+GGG | + | chr2_1:19934925-19934944 | Msa0200250:intron | 45.0% |
| !! | AATGACTTTAAAGCCCCTGG+CGG | - | chr2_1:19935034-19935053 | None:intergenic | 45.0% |
| !! | GGAAATGACTTTAAAGCCCC+TGG | - | chr2_1:19935037-19935056 | None:intergenic | 45.0% |
| GGTGGTGAAGACAAAAAGTG+TGG | + | chr2_1:19935291-19935310 | Msa0200250:CDS | 45.0% | |
| ! | TCTTTTTAAACGGCGGCGTT+TGG | + | chr2_1:19935344-19935363 | Msa0200250:CDS | 45.0% |
| TAACAGGTACCAAACGGTAC+TGG | + | chr2_1:19935786-19935805 | Msa0200250:intron | 45.0% | |
| !! | GCCCAGATTTTAAGAGCCTT+TGG | + | chr2_1:19936187-19936206 | Msa0200250:three_prime_UTR | 45.0% |
| !!! | ATATTATGAATATTTTTTTT+AGG | + | chr2_1:19930554-19930573 | Msa0200250:intron | 5.0% |
| !!! | TATTATGAATATTTTTTTTA+GGG | + | chr2_1:19930555-19930574 | Msa0200250:intron | 5.0% |
| !! | TAATAATAACATAATTTATT+CGG | - | chr2_1:19930686-19930705 | None:intergenic | 5.0% |
| AGCCATTAACAGTGGCCACA+AGG | - | chr2_1:19928506-19928525 | None:intergenic | 50.0% | |
| GTGGCCACTGTTAATGGCTT+TGG | + | chr2_1:19928507-19928526 | Msa0200250:CDS | 50.0% | |
| !! | TAATGGCTTTGGCATCGTGG+TGG | + | chr2_1:19928518-19928537 | Msa0200250:CDS | 50.0% |
| ! | TCTTGCTGGGATTTTGGACG+TGG | + | chr2_1:19929100-19929119 | Msa0200250:CDS | 50.0% |
| CTCTCGTATTAACTGGGAGG+AGG | + | chr2_1:19929449-19929468 | Msa0200250:intron | 50.0% | |
| CCCGAGAACCACTTATTTGG+GGG | - | chr2_1:19929909-19929928 | None:intergenic | 50.0% | |
| CCCCCAAATAAGTGGTTCTC+GGG | + | chr2_1:19929906-19929925 | Msa0200250:intron | 50.0% | |
| AAACATCGATGTCCCGTTCC+CGG | + | chr2_1:19931086-19931105 | Msa0200250:intron | 50.0% | |
| ATCTCTCTCTCTCCCTCTGT+TGG | + | chr2_1:19931486-19931505 | Msa0200250:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr2_1:19931450-19931469 | None:intergenic | 50.0% | |
| ! | CTGTTGCTTGACATCGGTCA+TGG | - | chr2_1:19932111-19932130 | None:intergenic | 50.0% |
| ! | AGGTGGCTGTTGCTTGACAT+CGG | - | chr2_1:19932117-19932136 | None:intergenic | 50.0% |
| ACCAAAGACTGAGGGATGTG+GGG | - | chr2_1:19932193-19932212 | None:intergenic | 50.0% | |
| CCAAAGACTAAGGGATGTGG+GGG | - | chr2_1:19932415-19932434 | None:intergenic | 50.0% | |
| GGCATCTCAATGGCTCTTCA+AGG | - | chr2_1:19932711-19932730 | None:intergenic | 50.0% | |
| CTTGAAAGGAGGGGTTTGTG+AGG | - | chr2_1:19933110-19933129 | None:intergenic | 50.0% | |
| AGCGGCAGTTAACAACCGAT+GGG | - | chr2_1:19933394-19933413 | None:intergenic | 50.0% | |
| TAGCGGCAGTTAACAACCGA+TGG | - | chr2_1:19933395-19933414 | None:intergenic | 50.0% | |
| ATCGGTTGTTAACTGCCGCT+AGG | + | chr2_1:19933394-19933413 | Msa0200250:intron | 50.0% | |
| AGCGGTAGTTAACAACCGCT+GGG | - | chr2_1:19933450-19933469 | None:intergenic | 50.0% | |
| GGTTCTGTAACTGGTGTGAG+CGG | - | chr2_1:19933468-19933487 | None:intergenic | 50.0% | |
| GTCGAACAGGACACATTTCC+TGG | - | chr2_1:19933515-19933534 | None:intergenic | 50.0% | |
| ! | ATAGAGACCGGTTCCACCAA+AGG | - | chr2_1:19934010-19934029 | None:intergenic | 50.0% |
| AAATCACAGGAGCGAAGAGG+CGG | - | chr2_1:19934100-19934119 | None:intergenic | 50.0% | |
| GAGAAATCACAGGAGCGAAG+AGG | - | chr2_1:19934103-19934122 | None:intergenic | 50.0% | |
| TTTCTCCACTCCGTGCATGT+TGG | + | chr2_1:19934117-19934136 | Msa0200250:intron | 50.0% | |
| !!! | TTGCTTTTCGGGTTAACCGG+AGG | + | chr2_1:19934210-19934229 | Msa0200250:intron | 50.0% |
| GCAACGATGTGTCCCATATC+CGG | + | chr2_1:19934315-19934334 | Msa0200250:intron | 50.0% | |
| GTGACGGTCATTGTGGGTTT+AGG | - | chr2_1:19934539-19934558 | None:intergenic | 50.0% | |
| ACCAAGCTAGGCTTAGGAAC+CGG | + | chr2_1:19934645-19934664 | Msa0200250:intron | 50.0% | |
| CATTGGCATTTCTCCGGTTC+CGG | - | chr2_1:19934667-19934686 | None:intergenic | 50.0% | |
| ATAGGTGAGGTAGGGGTTTC+TGG | + | chr2_1:19934918-19934937 | Msa0200250:intron | 50.0% | |
| !!! | GAGGTAGGGGTTTCTGGTTT+TGG | + | chr2_1:19934924-19934943 | Msa0200250:intron | 50.0% |
| !!! | GGTAGGGGTTTCTGGTTTTG+GGG | + | chr2_1:19934926-19934945 | Msa0200250:intron | 50.0% |
| !!! | GTAGGGGTTTCTGGTTTTGG+GGG | + | chr2_1:19934927-19934946 | Msa0200250:intron | 50.0% |
| !!! | TAGGGGTTTCTGGTTTTGGG+GGG | + | chr2_1:19934928-19934947 | Msa0200250:intron | 50.0% |
| CAGCGGTTGTTAACTATCGC+TGG | - | chr2_1:19934961-19934980 | None:intergenic | 50.0% | |
| CAGCGATAGTTAACAACCGC+TGG | + | chr2_1:19934959-19934978 | Msa0200250:intron | 50.0% | |
| ACAACCGACGTATCTTCCAG+CGG | + | chr2_1:19934998-19935017 | Msa0200250:intron | 50.0% | |
| ACTACCGCTGGAAGATACGT+CGG | - | chr2_1:19935005-19935024 | None:intergenic | 50.0% | |
| TCCATTCTTGGGGTAAGCTC+TGG | + | chr2_1:19935394-19935413 | Msa0200250:intron | 50.0% | |
| ACCAGAGCTTACCCCAAGAA+TGG | - | chr2_1:19935398-19935417 | None:intergenic | 50.0% | |
| TTGGAGGGAGAAGCTCGTAG+TGG | + | chr2_1:19929161-19929180 | Msa0200250:CDS | 55.0% | |
| !! | GAAGCTCGTAGTGGTGCTGT+TGG | + | chr2_1:19929170-19929189 | Msa0200250:CDS | 55.0% |
| ! | TGGCTCACCTCTTGCTGTCA+TGG | + | chr2_1:19929226-19929245 | Msa0200250:CDS | 55.0% |
| TGTGCGTACGCTCCAACAGA+GGG | - | chr2_1:19931501-19931520 | None:intergenic | 55.0% | |
| TTGAACCGCTCGACCTCGAT+CGG | + | chr2_1:19932030-19932049 | Msa0200250:intron | 55.0% | |
| CCAAAGACTGAGGGATGTGG+GGG | - | chr2_1:19932192-19932211 | None:intergenic | 55.0% | |
| TTGAACCGCTCGACCTCGAT+CGG | + | chr2_1:19932030-19932049 | Msa0200250:intron | 55.0% | |
| ! | CCCCCACATCCCTTAGTCTT+TGG | + | chr2_1:19932412-19932431 | Msa0200250:intron | 55.0% |
| !! | GACCGCTTGTGGATTGGTTG+AGG | - | chr2_1:19932806-19932825 | None:intergenic | 55.0% |
| TGCGGAGCAGCTTTCACTTG+TGG | - | chr2_1:19933082-19933101 | None:intergenic | 55.0% | |
| CGGCAGTTAACAACCGATGG+GGG | - | chr2_1:19933392-19933411 | None:intergenic | 55.0% | |
| GCGGCAGTTAACAACCGATG+GGG | - | chr2_1:19933393-19933412 | None:intergenic | 55.0% | |
| TACCAGCGGCAGTTAACAGC+CGG | - | chr2_1:19933427-19933446 | None:intergenic | 55.0% | |
| TAACAACCGCTGGGTACCAG+CGG | - | chr2_1:19933441-19933460 | None:intergenic | 55.0% | |
| GAGCGGTAGTTAACAACCGC+TGG | - | chr2_1:19933451-19933470 | None:intergenic | 55.0% | |
| ! | GTTGGCTCCTTTGGTGGAAC+CGG | + | chr2_1:19934000-19934019 | Msa0200250:intron | 55.0% |
| GCACGGAGTGGAGAAATCAC+AGG | - | chr2_1:19934113-19934132 | None:intergenic | 55.0% | |
| TACCTCCAACATGCACGGAG+TGG | - | chr2_1:19934125-19934144 | None:intergenic | 55.0% | |
| TCCGTGCATGTTGGAGGTAG+TGG | + | chr2_1:19934126-19934145 | Msa0200250:intron | 55.0% | |
| CCCACTACCTCCAACATGCA+CGG | - | chr2_1:19934130-19934149 | None:intergenic | 55.0% | |
| CCGTGCATGTTGGAGGTAGT+GGG | + | chr2_1:19934127-19934146 | Msa0200250:intron | 55.0% | |
| GCTTTGCACCTCCCGACAAA+TGG | - | chr2_1:19934350-19934369 | None:intergenic | 55.0% | |
| ! | TCGGGAGGTGCAAAGCTACT+AGG | + | chr2_1:19934354-19934373 | Msa0200250:intron | 55.0% |
| ! | AGGGCTATAGCGGAAGCCTT+GGG | - | chr2_1:19934519-19934538 | None:intergenic | 55.0% |
| ! | TAGGGCTATAGCGGAAGCCT+TGG | - | chr2_1:19934520-19934539 | None:intergenic | 55.0% |
| TCCGGTTCCTAAGCCTAGCT+TGG | - | chr2_1:19934649-19934668 | None:intergenic | 55.0% | |
| CTAGGCTTAGGAACCGGAAC+CGG | + | chr2_1:19934651-19934670 | Msa0200250:intron | 55.0% | |
| CGGAACCGGAGAAATGCCAA+TGG | + | chr2_1:19934665-19934684 | Msa0200250:intron | 55.0% | |
| !! | TAACAACCGCTGGTTCCCAG+CGG | + | chr2_1:19934969-19934988 | Msa0200250:intron | 55.0% |
| GTCGGTTGTTAACTGCCGCT+GGG | - | chr2_1:19934987-19935006 | None:intergenic | 55.0% | |
| TGGCGGTAGTTAACTACCGC+TGG | - | chr2_1:19935017-19935036 | None:intergenic | 55.0% | |
| AGCGGTAGTTAACTACCGCC+AGG | + | chr2_1:19935016-19935035 | Msa0200250:intron | 55.0% | |
| GCGGTAGTTAACTACCGCCA+GGG | + | chr2_1:19935017-19935036 | Msa0200250:intron | 55.0% | |
| CGGTAGTTAACTACCGCCAG+GGG | + | chr2_1:19935018-19935037 | Msa0200250:intron | 55.0% | |
| TTGAGTCATGGGGGAGCCTG+AGG | - | chr2_1:19931396-19931415 | None:intergenic | 60.0% | |
| GTGTGCGTACGCTCCAACAG+AGG | - | chr2_1:19931502-19931521 | None:intergenic | 60.0% | |
| ACTGTGTCACCGTCCGATCG+AGG | - | chr2_1:19932046-19932065 | None:intergenic | 60.0% | |
| CCCCCACATCCCTCAGTCTT+TGG | + | chr2_1:19932189-19932208 | Msa0200250:intron | 60.0% | |
| ACTGTGTCACCGTCCGATCG+AGG | - | chr2_1:19932046-19932065 | None:intergenic | 60.0% | |
| ! | GGGGTTTGTGAGGGAGTGTG+CGG | - | chr2_1:19933100-19933119 | None:intergenic | 60.0% |
| ACTGCCGCTAGGAAACACGC+CGG | + | chr2_1:19933405-19933424 | Msa0200250:intron | 60.0% | |
| ACAGCCGGCGTGTTTCCTAG+CGG | - | chr2_1:19933412-19933431 | None:intergenic | 60.0% | |
| TAACTGCCGCTGGTACCCAG+CGG | + | chr2_1:19933432-19933451 | Msa0200250:intron | 60.0% | |
| GAGCGAAGAGGCGGCAACAT+GGG | - | chr2_1:19934091-19934110 | None:intergenic | 60.0% | |
| CTCCACTCCGTGCATGTTGG+AGG | + | chr2_1:19934120-19934139 | Msa0200250:intron | 60.0% | |
| TAACTGCCGCTGGGAACCAG+CGG | - | chr2_1:19934978-19934997 | None:intergenic | 60.0% | |
| ! | CGTCGGTTGTTAACTGCCGC+TGG | - | chr2_1:19934988-19935007 | None:intergenic | 60.0% |
| ACCGCTCGACCTCGATCGGA+CGG | + | chr2_1:19932034-19932053 | Msa0200250:intron | 65.0% | |
| ACCGTCCGATCGAGGTCGAG+CGG | - | chr2_1:19932038-19932057 | None:intergenic | 65.0% | |
| ACCGCTCGACCTCGATCGGA+CGG | + | chr2_1:19932034-19932053 | Msa0200250:intron | 65.0% | |
| ACCGTCCGATCGAGGTCGAG+CGG | - | chr2_1:19932038-19932057 | None:intergenic | 65.0% | |
| CGAAGAGGCGGCAACATGGG+AGG | - | chr2_1:19934088-19934107 | None:intergenic | 65.0% | |
| GGAGCGAAGAGGCGGCAACA+TGG | - | chr2_1:19934092-19934111 | None:intergenic | 65.0% | |
| ACCGGAGGCCGTCCTCTAAG+TGG | + | chr2_1:19934225-19934244 | Msa0200250:intron | 65.0% | |
| CCCACTTAGAGGACGGCCTC+CGG | - | chr2_1:19934229-19934248 | None:intergenic | 65.0% | |
| CCGGAGGCCGTCCTCTAAGT+GGG | + | chr2_1:19934226-19934245 | Msa0200250:intron | 65.0% | |
| ! | CGCCGGCTGTTAACTGCCGC+TGG | + | chr2_1:19933422-19933441 | Msa0200250:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 19927896 | 19936296 | 19927896 | ID=Msa0200250;Name=Msa0200250 |
| chr2_1 | mRNA | 19927896 | 19936296 | 19927896 | ID=Msa0200250-mRNA-1;Parent=Msa0200250;Name=Msa0200250-mRNA-1;_AED=0.09;_eAED=0.09;_QI=166|1|1|1|1|1|6|328|246 |
| chr2_1 | exon | 19927896 | 19928095 | 19927896 | ID=Msa0200250-mRNA-1:exon:8270;Parent=Msa0200250-mRNA-1 |
| chr2_1 | exon | 19928241 | 19928277 | 19928241 | ID=Msa0200250-mRNA-1:exon:8271;Parent=Msa0200250-mRNA-1 |
| chr2_1 | exon | 19928380 | 19928590 | 19928380 | ID=Msa0200250-mRNA-1:exon:8272;Parent=Msa0200250-mRNA-1 |
| chr2_1 | exon | 19929086 | 19929247 | 19929086 | ID=Msa0200250-mRNA-1:exon:8273;Parent=Msa0200250-mRNA-1 |
| chr2_1 | exon | 19935286 | 19935405 | 19935286 | ID=Msa0200250-mRNA-1:exon:8274;Parent=Msa0200250-mRNA-1 |
| chr2_1 | exon | 19935792 | 19936296 | 19935792 | ID=Msa0200250-mRNA-1:exon:8275;Parent=Msa0200250-mRNA-1 |
| chr2_1 | five_prime_UTR | 19927896 | 19928061 | 19927896 | ID=Msa0200250-mRNA-1:five_prime_utr;Parent=Msa0200250-mRNA-1 |
| chr2_1 | CDS | 19928062 | 19928095 | 19928062 | ID=Msa0200250-mRNA-1:cds;Parent=Msa0200250-mRNA-1 |
| chr2_1 | CDS | 19928241 | 19928277 | 19928241 | ID=Msa0200250-mRNA-1:cds;Parent=Msa0200250-mRNA-1 |
| chr2_1 | CDS | 19928380 | 19928590 | 19928380 | ID=Msa0200250-mRNA-1:cds;Parent=Msa0200250-mRNA-1 |
| chr2_1 | CDS | 19929086 | 19929247 | 19929086 | ID=Msa0200250-mRNA-1:cds;Parent=Msa0200250-mRNA-1 |
| chr2_1 | CDS | 19935286 | 19935405 | 19935286 | ID=Msa0200250-mRNA-1:cds;Parent=Msa0200250-mRNA-1 |
| chr2_1 | CDS | 19935792 | 19935968 | 19935792 | ID=Msa0200250-mRNA-1:cds;Parent=Msa0200250-mRNA-1 |
| chr2_1 | three_prime_UTR | 19935969 | 19936296 | 19935969 | ID=Msa0200250-mRNA-1:three_prime_utr;Parent=Msa0200250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
