AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0200960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200960 MtrunA17_Chr2g0321211 93.246 992 33 1 1 958 1 992 0.0 1895
Msa0200960 MtrunA17_Chr4g0026671 77.126 988 173 9 1 941 1 982 0.0 1518
Msa0200960 MtrunA17_Chr8g0384161 25.000 392 202 9 11 338 11 374 2.06e-27 118
Msa0200960 MtrunA17_Chr3g0136971 26.627 169 96 2 16 184 464 604 4.20e-15 79.7
Msa0200960 MtrunA17_Chr5g0414581 33.333 165 101 4 16 174 246 407 1.74e-12 70.9
Msa0200960 MtrunA17_Chr5g0401661 23.770 244 135 4 16 220 399 630 1.47e-11 68.6
Msa0200960 MtrunA17_Chr8g0352821 27.528 178 99 4 9 184 305 454 1.87e-11 68.2
Msa0200960 MtrunA17_Chr4g0053651 24.180 244 134 4 16 220 292 523 2.54e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200960 AT3G44530.2 67.554 977 253 11 1 934 1 956 0.0 1297
Msa0200960 AT3G44530.1 65.381 1011 252 13 1 934 1 990 0.0 1276
Msa0200960 AT3G44530.3 65.274 838 227 11 140 934 2 818 0.0 1047
Msa0200960 AT3G44530.4 65.674 705 212 10 239 934 1 684 0.0 877
Msa0200960 AT5G64630.1 33.708 178 103 3 7 184 9 171 1.93e-26 113
Msa0200960 AT5G64630.2 33.708 178 103 3 7 184 9 171 2.05e-26 114
Msa0200960 AT5G64630.3 36.134 119 60 2 66 184 10 112 6.94e-17 84.7
Msa0200960 AT5G64630.3 21.322 469 271 13 28 460 20 426 7.36e-14 75.5
Msa0200960 AT5G25150.1 26.627 169 96 2 16 184 463 603 5.57e-13 73.6
Msa0200960 AT5G25150.2 26.627 169 96 2 16 184 463 603 6.09e-13 73.2
Msa0200960 AT5G67320.1 24.082 245 133 5 16 220 327 558 8.90e-12 69.3

Find 286 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGGGATCCCTTTATTTA+TGG 0.139689 2_1:+21662368 Msa0200960:CDS
TAGCTGGCAATGCGAATTTC+TGG 0.141884 2_1:+21661799 Msa0200960:CDS
ATTCAATAAAATTCAGATTC+TGG 0.196777 2_1:+21658247 Msa0200960:five_prime_UTR
TTCTTGTACAATATCAAATA+AGG 0.199358 2_1:+21664548 Msa0200960:three_prime_UTR
ACAACCACTGGTCCGATTTC+TGG 0.200258 2_1:+21661204 Msa0200960:CDS
GGTTGATCTTAGAAAATATT+TGG 0.216861 2_1:+21662840 Msa0200960:CDS
GGTTCAGGAACCACGGAATT+TGG 0.227590 2_1:+21659508 Msa0200960:CDS
TGGTGAGCTGGCTGCTTTAC+AGG 0.228132 2_1:+21662819 Msa0200960:CDS
CATTGGTCATATTCCATATA+TGG 0.235722 2_1:-21659907 None:intergenic
GCTGCACTGGAAATGCTTTC+CGG 0.257391 2_1:-21661306 None:intergenic
ATTGGCTTCATCCTTGGCTT+TGG 0.269759 2_1:+21663481 Msa0200960:CDS
TTCTCAATCGGTTTGGTTGC+TGG 0.269994 2_1:-21664305 None:intergenic
TTCTTTGGCTAGTGGGAGTT+TGG 0.270435 2_1:+21659874 Msa0200960:CDS
TCAATAAATCCCATAAATAA+AGG 0.277011 2_1:-21662378 None:intergenic
GTCTCCCGATGATTCTTCTT+TGG 0.279960 2_1:+21659859 Msa0200960:CDS
CGGTACTTCACCTGTTCTTT+TGG 0.282161 2_1:+21661638 Msa0200960:CDS
TTTGCCAGCTCTTGGAGTTT+GGG 0.286804 2_1:+21662784 Msa0200960:CDS
CAGTCTCAGATTTCCCTTCC+TGG 0.289618 2_1:-21660533 None:intergenic
TTGGCTTCATCCTTGGCTTT+GGG 0.291343 2_1:+21663482 Msa0200960:CDS
TCTGCAACATTTGATTTCTT+AGG 0.300556 2_1:+21660444 Msa0200960:CDS
CAAACAAACATCGGCCAAAA+AGG 0.301152 2_1:+21661044 Msa0200960:CDS
AAGCAGATGAATCTCGATTA+AGG 0.302876 2_1:+21663890 Msa0200960:CDS
CCTCCATCACCGGATGTATC+TGG 0.303980 2_1:-21661516 None:intergenic
ACTTGACATTCATGTCAAAT+AGG 0.306960 2_1:-21662720 None:intergenic
AGAGCCATTTGGTCTTGATT+TGG 0.310069 2_1:-21664260 None:intergenic
TCAGATTTAAAAGAACGTTC+TGG 0.312424 2_1:+21661444 Msa0200960:CDS
ACAGGCACTCCAACTACTTC+TGG 0.316367 2_1:-21661279 None:intergenic
ATTGTAAGGCTGTGGCTCTT+TGG 0.317518 2_1:-21660589 None:intergenic
CTGGAACTTTCTCAATTATC+AGG 0.318871 2_1:-21661497 None:intergenic
AAAGGGATCCCTTTATTTAT+GGG 0.322149 2_1:+21662369 Msa0200960:CDS
TAAAGTAGGTCGATCTTAAT+TGG 0.324735 2_1:+21659837 Msa0200960:intron
CATTCCCCTCTTTCAAGAAC+TGG 0.335731 2_1:-21660420 None:intergenic
CAACCCTGCGGGATCACTTT+GGG 0.337199 2_1:+21659395 Msa0200960:CDS
CTTTGGTCTGATAGGATATC+AGG 0.345362 2_1:+21661762 Msa0200960:CDS
TTCAATAAAATTCAGATTCT+GGG 0.347529 2_1:+21658248 Msa0200960:five_prime_UTR
CATGGAAAGTTTGTTGCATC+AGG 0.347917 2_1:+21659445 Msa0200960:CDS
TTGGGTCTGTCAATTGTGTT+AGG 0.354364 2_1:+21659413 Msa0200960:CDS
AGCTCAATTGGCTTCATCCT+TGG 0.355062 2_1:+21663475 Msa0200960:CDS
TGAGGAAACACAAGCTTCTC+AGG 0.360196 2_1:+21664144 Msa0200960:CDS
AGCTGGCAATGCGAATTTCT+GGG 0.370285 2_1:+21661800 Msa0200960:CDS
ATTTCTGTTTCTTTCATCAT+TGG 0.372100 2_1:-21661714 None:intergenic
TGCCCATTTGGAAGCTCAAT+TGG 0.376410 2_1:+21663463 Msa0200960:CDS
TGAATTCATTTAGCAATCTC+TGG 0.381506 2_1:-21664205 None:intergenic
GAGATTGCTAAATGAATTCA+TGG 0.389775 2_1:+21664208 Msa0200960:CDS
AAATGCTTAGCAACAAATAA+AGG 0.390314 2_1:-21660672 None:intergenic
GGTTTCCTTGGACCTCCAAC+AGG 0.393368 2_1:+21663925 Msa0200960:CDS
TGGACAACACCATCCATATA+TGG 0.393575 2_1:+21659894 Msa0200960:CDS
GGTGCAGACACGTGCCCATT+TGG 0.393989 2_1:+21663451 Msa0200960:CDS
CAGATTTAAAAGAACGTTCT+GGG 0.395818 2_1:+21661445 Msa0200960:CDS
CCAGTGGTTGTAACCATGTT+TGG 0.401887 2_1:-21661192 None:intergenic
TGCTTAACTGGACCAGAAAT+CGG 0.401909 2_1:-21661216 None:intergenic
GATTTATAAGTATCTTCTAT+AGG 0.403874 2_1:+21664421 Msa0200960:three_prime_UTR
TGGCTCTTTGGATCCAGTCT+TGG 0.404004 2_1:-21660577 None:intergenic
ATGTGTTCAGAATAGACAAT+AGG 0.405397 2_1:-21661345 None:intergenic
GGGCCACTCTAGCCTTGTTA+AGG 0.406687 2_1:+21659952 Msa0200960:CDS
CATGAGAGGAAGCCTGGTTC+AGG 0.406784 2_1:+21659493 Msa0200960:CDS
GGAGTATACTAAACTAATAT+AGG 0.407988 2_1:+21664399 Msa0200960:three_prime_UTR
TGGGCTGTTGGGTGTGAAGA+TGG 0.410183 2_1:+21661819 Msa0200960:CDS
ATTAGAGTATTTGATAAGAA+AGG 0.410952 2_1:+21661609 Msa0200960:CDS
TCATTTACAGTGTGTTCTCT+TGG 0.414164 2_1:-21661669 None:intergenic
TAGGAGATTCCTACGCAAAT+TGG 0.414515 2_1:-21658283 None:intergenic
GAAATGCTTTCCGGTTGAAC+AGG 0.416933 2_1:-21661297 None:intergenic
TGAACTGTTCTCAATCGGTT+TGG 0.416937 2_1:-21664312 None:intergenic
CTATCTCATATTCAGATAAC+AGG 0.419081 2_1:-21664232 None:intergenic
TTGAACCTCACCACAATTAT+CGG 0.421093 2_1:-21660477 None:intergenic
TAGGCATTGGCGATATTCAT+TGG 0.421482 2_1:-21663510 None:intergenic
TGCAACAAACTTTCCATGCT+TGG 0.422612 2_1:-21659440 None:intergenic
AGAATTATTCCAGAAGTAGT+TGG 0.426222 2_1:+21661270 Msa0200960:CDS
AAGAAGTCAATGAATCTTGA+AGG 0.428990 2_1:-21662414 None:intergenic
AGCCTCCAGATATTGAAAAC+TGG 0.431982 2_1:+21659539 Msa0200960:CDS
AGTTGGAGTGCCTGTTCAAC+CGG 0.432594 2_1:+21661287 Msa0200960:CDS
AGCAACGGTGCTTCCAAGAC+TGG 0.433887 2_1:+21660564 Msa0200960:CDS
GGCCACTCTAGCCTTGTTAA+GGG 0.434060 2_1:+21659953 Msa0200960:CDS
TGCATCAGGGTCTGATGATC+AGG 0.434394 2_1:+21659459 Msa0200960:CDS
AAATATTTGGCTCGGAAGCC+TGG 0.437218 2_1:+21662853 Msa0200960:CDS
ATTAAGTTGCTGAGCTGCAC+TGG 0.437712 2_1:-21661319 None:intergenic
CAATAAATCCCATAAATAAA+GGG 0.439851 2_1:-21662377 None:intergenic
AGAAGCAAGTTACAAGTTGA+TGG 0.440900 2_1:-21664529 None:intergenic
GACATAAGAGCTAGTACATT+GGG 0.443892 2_1:+21661402 Msa0200960:CDS
TGAATGTCAAGTGTTGGCTT+AGG 0.444246 2_1:+21662731 Msa0200960:CDS
TCTTGTACAATATCAAATAA+GGG 0.444998 2_1:+21664549 Msa0200960:three_prime_UTR
GAAGTCTGTGAGGGTTTCCT+TGG 0.445023 2_1:+21663913 Msa0200960:CDS
TGACACATGTACACTAAAGA+AGG 0.445359 2_1:-21658223 None:intergenic
CACACTGTAAATGACATTGC+AGG 0.446386 2_1:+21661678 Msa0200960:CDS
GAAAGCGTACATAGGACAAT+AGG 0.447882 2_1:-21663529 None:intergenic
TCTGCAAAGCTATCAAAGTC+TGG 0.448277 2_1:+21662661 Msa0200960:CDS
ATCAAACACTTTGGTCTGAT+AGG 0.448483 2_1:+21661754 Msa0200960:CDS
CTTGCTATGAAAGAGCCAAT+AGG 0.448630 2_1:-21659989 None:intergenic
GCAACCCTGCGGGATCACTT+TGG 0.449256 2_1:+21659394 Msa0200960:CDS
GGGGTTGCGTGGGATCCTAT+TGG 0.449577 2_1:+21659974 Msa0200960:CDS
TTGGTAAAATGAGAGCCATT+TGG 0.451851 2_1:-21664271 None:intergenic
CTAAAGCTTACAAGAACAAA+AGG 0.454756 2_1:-21663994 None:intergenic
TATTATTGCCATCGGAAGTC+AGG 0.456770 2_1:+21660611 Msa0200960:CDS
GTTGAAATTGGGGAAGTTGA+AGG 0.457190 2_1:-21658317 None:intergenic
GCCTCAAGTTAACGACGTTA+AGG 0.457310 2_1:+21661143 Msa0200960:CDS
AAGCCAATTGAGCTTCCAAA+TGG 0.466100 2_1:-21663466 None:intergenic
GATGATCCCATCATCATTGT+AGG 0.472018 2_1:-21662295 None:intergenic
TGTAAATGACATTGCAGGGC+TGG 0.472765 2_1:+21661683 Msa0200960:CDS
AATTAATTTAGCAGAAAGTC+CGG 0.475157 2_1:+21660993 Msa0200960:CDS
AACATTGATGCCTCCATCAC+CGG 0.475229 2_1:-21661526 None:intergenic
GCTACTGAACTGTTCTCAAT+CGG 0.475810 2_1:-21664317 None:intergenic
TCCTCAGCCATCCCTGTTGG+AGG 0.476270 2_1:-21663937 None:intergenic
AATGCGAATTTCTGGGCTGT+TGG 0.478045 2_1:+21661807 Msa0200960:CDS
CTCAGATTTGCTACTGGTGG+TGG 0.479758 2_1:+21658489 Msa0200960:CDS
ATGCGAATTTCTGGGCTGTT+GGG 0.481341 2_1:+21661808 Msa0200960:CDS
CCTGCACTAACACAAGCCTT+TGG 0.482671 2_1:-21661099 None:intergenic
CCTATGTACGCTTTCTTGCA+AGG 0.483679 2_1:+21663537 Msa0200960:CDS
AATTCCGTGGTTCCTGAACC+AGG 0.483707 2_1:-21659505 None:intergenic
AACGTTCTGGGGTTACTGCT+AGG 0.485333 2_1:+21661457 Msa0200960:CDS
CATTTCATTACCACTACTCA+TGG 0.485672 2_1:+21660372 Msa0200960:CDS
GGACGTGCTTCCAAAAGAAC+AGG 0.485888 2_1:-21661648 None:intergenic
GAAATCTCTTGGTGCGGACA+TGG 0.486344 2_1:+21659342 Msa0200960:CDS
GCCACTCTAGCCTTGTTAAG+GGG 0.487208 2_1:+21659954 Msa0200960:CDS
CCGAATCTTTGCAGGGAATG+AGG 0.487466 2_1:+21664126 Msa0200960:intron
TCCACCAGGTTGAACATCAA+TGG 0.488643 2_1:-21658466 None:intergenic
AACGTCGTTAACTTGAGGCT+TGG 0.489196 2_1:-21661139 None:intergenic
CAGATTCAAGTAACTTAGCA+TGG 0.490162 2_1:+21663968 Msa0200960:CDS
CCACTCTAGCCTTGTTAAGG+GGG 0.490260 2_1:+21659955 Msa0200960:CDS
CCAAAGGCTTGTGTTAGTGC+AGG 0.490964 2_1:+21661099 Msa0200960:CDS
AGAGTATTTGATAAGAAAGG+AGG 0.491490 2_1:+21661612 Msa0200960:CDS
AGTCTCAGATTTCCCTTCCT+GGG 0.493440 2_1:-21660532 None:intergenic
AGCAGATGAATCTCGATTAA+GGG 0.493559 2_1:+21663891 Msa0200960:CDS
AAGTTACTTGAATCTGAAGA+TGG 0.493806 2_1:-21663961 None:intergenic
TGATCCAAATCAAGACCAAA+TGG 0.495342 2_1:+21664256 Msa0200960:CDS
ATATGGAATATGAAATCTCT+TGG 0.496172 2_1:+21659331 Msa0200960:CDS
AATCTTGAAGGAGACAAGTT+CGG 0.496892 2_1:-21662402 None:intergenic
CCTTGGACCTCCAACAGGGA+TGG 0.496981 2_1:+21663930 Msa0200960:CDS
ATTGATGCTGGTGACAAGAA+AGG 0.500753 2_1:+21662351 Msa0200960:CDS
GAGCTGGCAAAATTTGATGC+AGG 0.500810 2_1:-21662772 None:intergenic
GAGTTGAAGAGAAGTCGTTA+TGG 0.500925 2_1:+21660952 Msa0200960:CDS
GTCTGTCAATTGTGTTAGGT+GGG 0.502860 2_1:+21659417 Msa0200960:CDS
CTCATTGCCTACAGAACCTC+CGG 0.504647 2_1:-21661169 None:intergenic
AAAGTGTTGTAGATTTATCC+TGG 0.505238 2_1:+21660703 Msa0200960:CDS
ATGATTCTTCTTTGGCTAGT+GGG 0.507720 2_1:+21659867 Msa0200960:CDS
CCGATGGCAATAATATTGTA+AGG 0.507726 2_1:-21660603 None:intergenic
TCCATTGATGTTCAACCTGG+TGG 0.508021 2_1:+21658465 Msa0200960:CDS
CCAAACATGGTTACAACCAC+TGG 0.508512 2_1:+21661192 Msa0200960:CDS
AACAGCAGTGCAAATTCCAT+TGG 0.509139 2_1:-21659924 None:intergenic
GAGAAGATTTACACTAAGTG+TGG 0.509912 2_1:+21662259 Msa0200960:intron
AAGGGAAATCTGAGACTGTC+GGG 0.509959 2_1:+21660538 Msa0200960:CDS
CTGCCCCAGTTCTTGAAAGA+GGG 0.513504 2_1:+21660415 Msa0200960:CDS
GGTCTGTCAATTGTGTTAGG+TGG 0.514996 2_1:+21659416 Msa0200960:CDS
TGCAATGCCTACAATGATGA+TGG 0.515186 2_1:+21662288 Msa0200960:CDS
GAGTTTAAATGATGCTGAGC+TGG 0.516401 2_1:+21660927 Msa0200960:CDS
ATTCCCCTCTTTCAAGAACT+GGG 0.517009 2_1:-21660419 None:intergenic
GAATGTCAAGTGTTGGCTTA+GGG 0.517230 2_1:+21662732 Msa0200960:CDS
AAGTTGATGGGATAAATCAT+AGG 0.517719 2_1:-21664516 None:intergenic
GAGTATTTGATAAGAAAGGA+GGG 0.517773 2_1:+21661613 Msa0200960:CDS
GGTTCCTCAGCCATCCCTGT+TGG 0.518156 2_1:-21663940 None:intergenic
TTTCTGTTCGACGCCATCGA+TGG 0.518720 2_1:-21664179 None:intergenic
TTGATGCTGGTGACAAGAAA+GGG 0.522971 2_1:+21662352 Msa0200960:CDS
TTAATACATGAGAGGAAGCC+TGG 0.526317 2_1:+21659487 Msa0200960:CDS
GATGATTCTTCTTTGGCTAG+TGG 0.527580 2_1:+21659866 Msa0200960:CDS
ATGTTCCTTGGATGGATCTG+TGG 0.530950 2_1:+21660870 Msa0200960:CDS
CTTGGCAGAATGACTGATGA+TGG 0.531305 2_1:+21663428 Msa0200960:intron
ATTTGGCTCGGAAGCCTGGT+TGG 0.531329 2_1:+21662857 Msa0200960:CDS
CTCGGAAGCCTGGTTGGACA+AGG 0.531727 2_1:+21662863 Msa0200960:CDS
TCTGCCCCAGTTCTTGAAAG+AGG 0.531947 2_1:+21660414 Msa0200960:CDS
TTATAGACTGTGATGAATGC+TGG 0.532011 2_1:+21662326 Msa0200960:CDS
TTCAATTCAAAGTGGTGAGC+TGG 0.532489 2_1:+21662807 Msa0200960:CDS
AAGGCTTCTTGCAACCCTGC+GGG 0.533101 2_1:+21659384 Msa0200960:CDS
AGTACCTTTGAAGTGTGTGT+TGG 0.533726 2_1:-21664471 None:intergenic
AAAGAATTCTTCTAATGCCC+AGG 0.539984 2_1:+21660515 Msa0200960:CDS
TGGTTCCCCGCTTGTTGTGT+TGG 0.540653 2_1:+21662681 Msa0200960:CDS
TCCTTAACGTCGTTAACTTG+AGG 0.541343 2_1:-21661144 None:intergenic
CTTAGCAACAAATAAAGGAC+GGG 0.541542 2_1:-21660667 None:intergenic
CCCTCATGTCTAAGCCAACT+AGG 0.547293 2_1:-21658429 None:intergenic
ACGTTCTGGGGTTACTGCTA+GGG 0.547430 2_1:+21661458 Msa0200960:CDS
AGCCAATTGAGCTTCCAAAT+GGG 0.548603 2_1:-21663465 None:intergenic
TATCAGGCCGTCAGAAATTG+TGG 0.549425 2_1:-21661481 None:intergenic
TGTGTTAGGTGGGCCAAGCA+TGG 0.549689 2_1:+21659427 Msa0200960:CDS
AGGCATCAATGTTCAACAGA+TGG 0.550641 2_1:+21661536 Msa0200960:CDS
GAGAAAGTTCCAGATACATC+CGG 0.551094 2_1:+21661507 Msa0200960:CDS
ATCTTAGAAAATATTTGGCT+CGG 0.552826 2_1:+21662845 Msa0200960:CDS
AATTCTTCTAATGCCCAGGA+AGG 0.555579 2_1:+21660519 Msa0200960:CDS
GGCATCAATGTTCAACAGAT+GGG 0.556962 2_1:+21661537 Msa0200960:CDS
AGAAGATTTACACTAAGTGT+GGG 0.559562 2_1:+21662260 Msa0200960:intron
TAGTCCACACTGTTATTGTC+CGG 0.562387 2_1:-21660635 None:intergenic
GGTGGACTCAGATTTGCTAC+TGG 0.562938 2_1:+21658483 Msa0200960:CDS
GTTGAAGGAACTTAGAACCT+AGG 0.564021 2_1:-21658302 None:intergenic
GCAATAATATTGTAAGGCTG+TGG 0.564130 2_1:-21660597 None:intergenic
GTTCCAGATACATCCGGTGA+TGG 0.565692 2_1:+21661513 Msa0200960:CDS
AGCACCAACACACACTTCAA+AGG 0.565983 2_1:+21664467 Msa0200960:three_prime_UTR
GGAACCACGGAATTTGGCAG+TGG 0.567462 2_1:+21659514 Msa0200960:CDS
GTTGCTGGTGAAGATGACTT+TGG 0.568129 2_1:-21664290 None:intergenic
ACTAGCCAAAGAAGAATCAT+CGG 0.568194 2_1:-21659864 None:intergenic
GACACATGTACACTAAAGAA+GGG 0.569509 2_1:-21658222 None:intergenic
ACCTAGTTGGCTTAGACATG+AGG 0.569637 2_1:+21658428 Msa0200960:CDS
TGTTCCTTGGATGGATCTGT+GGG 0.570329 2_1:+21660871 Msa0200960:CDS
AGTCGTTATGGCGATGTGAG+TGG 0.570515 2_1:+21660964 Msa0200960:CDS
CTCTCCACTGCCAAATTCCG+TGG 0.571674 2_1:-21659518 None:intergenic
TGAACCCAAACTCCAAGAGC+TGG 0.571680 2_1:-21662788 None:intergenic
AATTTGCGTAGGAATCTCCT+AGG 0.571684 2_1:+21658285 Msa0200960:five_prime_UTR
AGATTCAAGTAACTTAGCAT+GGG 0.573169 2_1:+21663969 Msa0200960:CDS
CCATCCCTGTTGGAGGTCCA+AGG 0.574661 2_1:-21663930 None:intergenic
CTCATGGTTTCAAGAAGCCT+AGG 0.574709 2_1:+21660388 Msa0200960:CDS
TGACATAAGAGCTAGTACAT+TGG 0.575407 2_1:+21661401 Msa0200960:CDS
GAGACTGTCGGGTGGAGCAA+CGG 0.576961 2_1:+21660549 Msa0200960:CDS
GAAGGGAAATCTGAGACTGT+CGG 0.577131 2_1:+21660537 Msa0200960:CDS
CTAGCCAAAGAAGAATCATC+GGG 0.577375 2_1:-21659863 None:intergenic
CATATATGGAATATGACCAA+TGG 0.577450 2_1:+21659908 Msa0200960:CDS
TTGACATGAATGTCAAGTGT+TGG 0.578333 2_1:+21662725 Msa0200960:CDS
AGTATTTGATAAGAAAGGAG+GGG 0.578692 2_1:+21661614 Msa0200960:CDS
GAAGCAAGTTACAAGTTGAT+GGG 0.579171 2_1:-21664528 None:intergenic
TCATTACGACCAATTTGCGT+AGG 0.579434 2_1:+21658274 Msa0200960:five_prime_UTR
GTGTTGCCAACACAACAAGC+GGG 0.581092 2_1:-21662687 None:intergenic
AGAACTGGGGCAGAATGCCT+AGG 0.581232 2_1:-21660405 None:intergenic
CCTTACAATATTATTGCCAT+CGG 0.582998 2_1:+21660603 Msa0200960:CDS
ACAGAAATTGTATGCACAAG+GGG 0.583515 2_1:+21661729 Msa0200960:CDS
ATTACACACCTTGTCCAACC+AGG 0.583716 2_1:-21662871 None:intergenic
GAGAGGGCACTCTGCTGATG+TGG 0.583964 2_1:+21659579 Msa0200960:CDS
CCTTGCAAGAAAGCGTACAT+AGG 0.585401 2_1:-21663537 None:intergenic
GTTAACGACGTTAAGGAGAC+CGG 0.587417 2_1:+21661150 Msa0200960:CDS
ATGGAAAGTTTGTTGCATCA+GGG 0.588867 2_1:+21659446 Msa0200960:CDS
GGTCATATTCCATATATGGA+TGG 0.589286 2_1:-21659903 None:intergenic
TTGCCATCGGAAGTCAGGAC+CGG 0.591201 2_1:+21660616 Msa0200960:CDS
TGTCCGGTCCTGACTTCCGA+TGG 0.594096 2_1:-21660619 None:intergenic
CGTGTTGCCAACACAACAAG+CGG 0.595248 2_1:-21662688 None:intergenic
AAGGAGACCGGAGGTTCTGT+AGG 0.596971 2_1:+21661162 Msa0200960:CDS
AGCTGGCAAAATTTGATGCA+GGG 0.597004 2_1:-21662771 None:intergenic
GCTTCTAGAAGTAACTGTGC+CGG 0.597032 2_1:-21661012 None:intergenic
TGCCCCAGTTCTTGAAAGAG+GGG 0.597230 2_1:+21660416 Msa0200960:CDS
TTGGCAGAATGACTGATGAT+GGG 0.597498 2_1:+21663429 Msa0200960:intron
TCATGTCAAATAGGAAAGCA+TGG 0.597967 2_1:-21662711 None:intergenic
CCAGATACATCCGGTGATGG+AGG 0.598893 2_1:+21661516 Msa0200960:CDS
CAAAGGCTTGTGTTAGTGCA+GGG 0.599021 2_1:+21661100 Msa0200960:CDS
CAGTTCTTGAAAGAGGGGAA+TGG 0.599914 2_1:+21660421 Msa0200960:CDS
GGAAGATATTCTTCCATCGA+TGG 0.600304 2_1:+21664166 Msa0200960:CDS
ACACTGTAAATGACATTGCA+GGG 0.601236 2_1:+21661679 Msa0200960:CDS
GTAGCAAATCTGAGTCCACC+AGG 0.602920 2_1:-21658480 None:intergenic
CGATTAAGGGAAGTCTGTGA+GGG 0.604692 2_1:+21663904 Msa0200960:CDS
GGACTCAGATTTGCTACTGG+TGG 0.610564 2_1:+21658486 Msa0200960:CDS
TTCATCACAGTCTATAAATG+TGG 0.610687 2_1:-21662320 None:intergenic
AAAGAGTATAGACGCCCTGA+TGG 0.611152 2_1:+21661240 Msa0200960:CDS
GTACATAGGACAATAGGCAT+TGG 0.611246 2_1:-21663523 None:intergenic
CAGACCCAAAGTGATCCCGC+AGG 0.614670 2_1:-21659399 None:intergenic
AAACAGAAATTGTATGCACA+AGG 0.615864 2_1:+21661727 Msa0200960:CDS
ACCTCCAACAGGGATGGCTG+AGG 0.617062 2_1:+21663936 Msa0200960:CDS
GTGTGAAGATGGATGTCTGC+AGG 0.617995 2_1:+21661830 Msa0200960:CDS
GCTTAGCAACAAATAAAGGA+CGG 0.619458 2_1:-21660668 None:intergenic
AGCTTCTACCAAACAAACAT+CGG 0.622657 2_1:+21661035 Msa0200960:CDS
TGAATGCTGGACATTGATGC+TGG 0.625601 2_1:+21662339 Msa0200960:CDS
CTTCTTGAAACCATGAGTAG+TGG 0.628214 2_1:-21660382 None:intergenic
ATTCTTCTAATGCCCAGGAA+GGG 0.629115 2_1:+21660520 Msa0200960:CDS
TACTGGTGGTGGTGACCACA+AGG 0.629423 2_1:+21658500 Msa0200960:CDS
ACACAATGCTCCGATAATTG+TGG 0.632313 2_1:+21660467 Msa0200960:CDS
CCTAGTTGGCTTAGACATGA+GGG 0.632379 2_1:+21658429 Msa0200960:CDS
AAAGGCTTCTTGCAACCCTG+CGG 0.632568 2_1:+21659383 Msa0200960:CDS
TCGATTAAGGGAAGTCTGTG+AGG 0.635325 2_1:+21663903 Msa0200960:CDS
AAAGTCTCGACACTTCTCAA+AGG 0.635338 2_1:+21659365 Msa0200960:CDS
ATTGGCAGATCCCAAAGCCA+AGG 0.635785 2_1:-21663492 None:intergenic
AGATTTAAAAGAACGTTCTG+GGG 0.636158 2_1:+21661446 Msa0200960:CDS
TGTAGGCAATGAGCCAAACA+TGG 0.636189 2_1:+21661179 Msa0200960:CDS
CAGTTCAGTAGCAATCGACA+AGG 0.636525 2_1:+21664328 Msa0200960:CDS
GAGGAAACACAAGCTTCTCA+GGG 0.640369 2_1:+21664145 Msa0200960:CDS
TTCCCCTCTTTCAAGAACTG+GGG 0.642026 2_1:-21660418 None:intergenic
GCAATGCCTACAATGATGAT+GGG 0.643118 2_1:+21662289 Msa0200960:CDS
AACAGAAATTGTATGCACAA+GGG 0.644066 2_1:+21661728 Msa0200960:CDS
ACAAAAGAAGACAACGCCAA+AGG 0.644606 2_1:+21661083 Msa0200960:CDS
CAGAAATTGTATGCACAAGG+GGG 0.645381 2_1:+21661730 Msa0200960:CDS
CGGTGCTCAAGCAAAGACAT+TGG 0.646083 2_1:+21664355 Msa0200960:CDS
GAATATGAAATCTCTTGGTG+CGG 0.646641 2_1:+21659336 Msa0200960:CDS
AGGCGATATTAATACATGAG+AGG 0.650057 2_1:+21659479 Msa0200960:CDS
TTTGATAAGAAAGGAGGGGA+CGG 0.651367 2_1:+21661618 Msa0200960:CDS
GTTTCCTTGGACCTCCAACA+GGG 0.657582 2_1:+21663926 Msa0200960:CDS
ATAAGAGCTAGTACATTGGG+AGG 0.661571 2_1:+21661405 Msa0200960:CDS
GTAGCAATCGACAAGGAGGA+CGG 0.662633 2_1:+21664335 Msa0200960:CDS
AGACCCAAAGTGATCCCGCA+GGG 0.665396 2_1:-21659398 None:intergenic
TGCACCCACAGATCCATCCA+AGG 0.667245 2_1:-21660875 None:intergenic
GAAGCCTGGTTCAGGAACCA+CGG 0.674830 2_1:+21659501 Msa0200960:CDS
ATGCTCCGATAATTGTGGTG+AGG 0.677092 2_1:+21660472 Msa0200960:CDS
TTCAGTAGCAATCGACAAGG+AGG 0.683915 2_1:+21664331 Msa0200960:CDS
AGTTTGGGTTCAATTCAAAG+TGG 0.685790 2_1:+21662799 Msa0200960:CDS
AGAAATTGTATGCACAAGGG+GGG 0.686580 2_1:+21661731 Msa0200960:CDS
TGGACCAGAAATCGGACCAG+TGG 0.688705 2_1:-21661208 None:intergenic
TTAGCAACAAATAAAGGACG+GGG 0.689587 2_1:-21660666 None:intergenic
TGGCAGAATGACTGATGATG+GGG 0.692108 2_1:+21663430 Msa0200960:intron
GCTAGGGCCACAATTTCTGA+CGG 0.693737 2_1:+21661474 Msa0200960:CDS
TGTTGCCAACACAACAAGCG+GGG 0.693814 2_1:-21662686 None:intergenic
GGAAATCTGAGACTGTCGGG+TGG 0.693970 2_1:+21660541 Msa0200960:CDS
AAAGTTGTGATGACTCTGAG+AGG 0.694526 2_1:+21659562 Msa0200960:CDS
CGGCTTGGATGGTCTCCATG+TGG 0.696812 2_1:+21660348 Msa0200960:CDS
GTGGTAATGAAATGACCACA+TGG 0.706100 2_1:-21660363 None:intergenic
AAGTTGTGATGACTCTGAGA+GGG 0.706584 2_1:+21659563 Msa0200960:CDS
AACGACGTTAAGGAGACCGG+AGG 0.710315 2_1:+21661153 Msa0200960:CDS
AGGACCGGACAATAACAGTG+TGG 0.768026 2_1:+21660631 Msa0200960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+TGG - chr2_1:21659719-21659738 None:intergenic 0.0%
!!! TTCAATTATTTTAATTAACT+TGG + chr2_1:21659796-21659815 Msa0200960:intron 10.0%
!!! TCAATTATTTTAATTAACTT+GGG + chr2_1:21659797-21659816 Msa0200960:intron 10.0%
!!! AATTTTAAATAAGTATTGAA+GGG - chr2_1:21662053-21662072 None:intergenic 10.0%
!!! AAATTTTAAATAAGTATTGA+AGG - chr2_1:21662054-21662073 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+AGG + chr2_1:21663077-21663096 Msa0200960:intron 10.0%
!!! TCTGAATTTATTTGAATTTT+TGG + chr2_1:21658535-21658554 Msa0200960:intron 15.0%
!! AAAACAATAAATAAAACAAG+AGG - chr2_1:21659631-21659650 None:intergenic 15.0%
!! AAAAAAAGGAAACATTAATT+AGG - chr2_1:21660304-21660323 None:intergenic 15.0%
!! TCAAAAGAAGAAAAATAAAA+AGG - chr2_1:21660818-21660837 None:intergenic 15.0%
!! AACAGAAAATTTAGTATAAA+GGG - chr2_1:21661984-21662003 None:intergenic 15.0%
!! TAAAAATTCTAATCAAAAGA+TGG - chr2_1:21663376-21663395 None:intergenic 15.0%
!!! ATTAGAATTTTTATGTTAGA+AGG + chr2_1:21663383-21663402 Msa0200960:intron 15.0%
!!! TTAGAATTTTTATGTTAGAA+GGG + chr2_1:21663384-21663403 Msa0200960:intron 15.0%
!! CTTATTAAATATGAATATCT+TGG + chr2_1:21663410-21663429 Msa0200960:intron 15.0%
!! TTCATTTATATATTTACTGA+AGG + chr2_1:21663576-21663595 Msa0200960:intron 15.0%
!! TTAAATTAGATAACATAGTA+AGG - chr2_1:21663789-21663808 None:intergenic 15.0%
!! ATTCAATAAAATTCAGATTC+TGG + chr2_1:21658247-21658266 Msa0200960:five_prime_UTR 20.0%
!! TTCAATAAAATTCAGATTCT+GGG + chr2_1:21658248-21658267 Msa0200960:five_prime_UTR 20.0%
!! AAAAAAAAAGGTTGAAATTG+GGG - chr2_1:21658330-21658349 None:intergenic 20.0%
!! GAAAAAAAAAGGTTGAAATT+GGG - chr2_1:21658331-21658350 None:intergenic 20.0%
!! TGAAAAAAAAAGGTTGAAAT+TGG - chr2_1:21658332-21658351 None:intergenic 20.0%
!! TCTTCAACTATGAAAAAAAA+AGG - chr2_1:21658342-21658361 None:intergenic 20.0%
!! TTATATACAAATACACAATG+TGG + chr2_1:21658867-21658886 Msa0200960:intron 20.0%
!! ATAAAGGCTAAAAACTATAT+TGG - chr2_1:21659165-21659184 None:intergenic 20.0%
!! TTGTACTAAATAGTGTATTA+TGG + chr2_1:21659196-21659215 Msa0200960:intron 20.0%
!! ATGATAAAACTGTGATTATT+TGG + chr2_1:21660020-21660039 Msa0200960:intron 20.0%
!!! AATTCTTTTTGAACAGAAAA+TGG - chr2_1:21660503-21660522 None:intergenic 20.0%
!!! TATTTTTCTTCTTTTGAAAC+AGG + chr2_1:21660821-21660840 Msa0200960:intron 20.0%
!!! ATTAGAGTATTTGATAAGAA+AGG + chr2_1:21661609-21661628 Msa0200960:CDS 20.0%
!! CAACAGAAAATTTAGTATAA+AGG - chr2_1:21661985-21662004 None:intergenic 20.0%
!! CAATAAATCCCATAAATAAA+GGG - chr2_1:21662380-21662399 None:intergenic 20.0%
!! TCAATAAATCCCATAAATAA+AGG - chr2_1:21662381-21662400 None:intergenic 20.0%
!! AAACAACTGAATGTAATATA+TGG - chr2_1:21662482-21662501 None:intergenic 20.0%
!! AAATTGACCCATAAAAATAT+TGG - chr2_1:21663037-21663056 None:intergenic 20.0%
!! TTAAAAAAAATGTGTGAAGT+TGG - chr2_1:21664022-21664041 None:intergenic 20.0%
!! ATTAAAAATATTCAGAGTGT+AGG + chr2_1:21664378-21664397 Msa0200960:exon 20.0%
!! GATTTATAAGTATCTTCTAT+AGG + chr2_1:21664421-21664440 Msa0200960:three_prime_UTR 20.0%
!! TTCTTGTACAATATCAAATA+AGG + chr2_1:21664548-21664567 Msa0200960:three_prime_UTR 20.0%
!! TCTTGTACAATATCAAATAA+GGG + chr2_1:21664549-21664568 Msa0200960:three_prime_UTR 20.0%
!! TTATCAATTTTCTTGAAAGG+TGG - chr2_1:21658201-21658220 None:intergenic 25.0%
!! GGTTTATCAATTTTCTTGAA+AGG - chr2_1:21658204-21658223 None:intergenic 25.0%
! AGAAAAAAATTGATACCTTG+TGG - chr2_1:21658518-21658537 None:intergenic 25.0%
!!! TGATTAAACATTGATTTGCA+GGG + chr2_1:21658611-21658630 Msa0200960:intron 25.0%
! AGTCAAAAGATTACATGATA+TGG + chr2_1:21658790-21658809 Msa0200960:intron 25.0%
!!! TGATTTGTTTTCAAAGAACT+TGG + chr2_1:21659060-21659079 Msa0200960:intron 25.0%
!!! CTACTATTTTTCATGATATG+CGG - chr2_1:21659100-21659119 None:intergenic 25.0%
!!! TATAGTTTTTAGCCTTTATC+CGG + chr2_1:21659166-21659185 Msa0200960:intron 25.0%
! TATTTAGTACAAATTGTTGC+CGG - chr2_1:21659188-21659207 None:intergenic 25.0%
! ATATGGAATATGAAATCTCT+TGG + chr2_1:21659331-21659350 Msa0200960:CDS 25.0%
! ATAAAACAAGAGGTTGAAAA+AGG - chr2_1:21659621-21659640 None:intergenic 25.0%
!!! TCAGTAAGTTCTTACTTTTA+AGG + chr2_1:21660094-21660113 Msa0200960:intron 25.0%
! AAATGCTTAGCAACAAATAA+AGG - chr2_1:21660675-21660694 None:intergenic 25.0%
! AATTAATTTAGCAGAAAGTC+CGG + chr2_1:21660993-21661012 Msa0200960:CDS 25.0%
!!! CTTCTGGAATAATTCTTTTA+CGG - chr2_1:21661266-21661285 None:intergenic 25.0%
!! ATTTCTGTTTCTTTCATCAT+TGG - chr2_1:21661717-21661736 None:intergenic 25.0%
! ACATTTATTGTATGCATACA+TGG + chr2_1:21661867-21661886 Msa0200960:intron 25.0%
! AATCCAACATTATTCGAATT+AGG - chr2_1:21662091-21662110 None:intergenic 25.0%
!!! GTTAATTTGTATAGAATGTG+TGG + chr2_1:21662132-21662151 Msa0200960:intron 25.0%
! TTAGTGTAAATCTTCTCAAA+AGG - chr2_1:21662256-21662275 None:intergenic 25.0%
! CAAAATTGTTGAGAAAATCA+AGG - chr2_1:21662577-21662596 None:intergenic 25.0%
!!! CTCAACAATTTTGATTTCAT+TGG + chr2_1:21662584-21662603 Msa0200960:intron 25.0%
! GGTTGATCTTAGAAAATATT+TGG + chr2_1:21662840-21662859 Msa0200960:CDS 25.0%
! ATCTTAGAAAATATTTGGCT+CGG + chr2_1:21662845-21662864 Msa0200960:CDS 25.0%
! GTCGATATTCCATATTTAAT+TGG + chr2_1:21662925-21662944 Msa0200960:intron 25.0%
! CACTAAAGTCCAATTAAATA+TGG - chr2_1:21662937-21662956 None:intergenic 25.0%
!!! TTTGTCATTTTCGCTTTAAT+AGG + chr2_1:21662998-21663017 Msa0200960:intron 25.0%
!!! TGCTACTCCAATATTTTTAT+GGG + chr2_1:21663027-21663046 Msa0200960:intron 25.0%
! TCTATTCTGTTCTCATAAAA+TGG + chr2_1:21663124-21663143 Msa0200960:intron 25.0%
! TTAAAGTAGTTAAAGGATCA+GGG - chr2_1:21663255-21663274 None:intergenic 25.0%
! ATAAGGGTTAAAGTAGTTAA+AGG - chr2_1:21663262-21663281 None:intergenic 25.0%
! GAAAATAAATACAGAACATG+AGG - chr2_1:21663347-21663366 None:intergenic 25.0%
! AAATTCTAATCAAAAGATGG+TGG - chr2_1:21663373-21663392 None:intergenic 25.0%
!! GTTTTCTACATAAATTGTAG+TGG + chr2_1:21663642-21663661 Msa0200960:intron 25.0%
! AATGATTATGAAATGATTGC+AGG + chr2_1:21663866-21663885 Msa0200960:intron 25.0%
! ATGATTATGAAATGATTGCA+GGG + chr2_1:21663867-21663886 Msa0200960:intron 25.0%
! GGAGTATACTAAACTAATAT+AGG + chr2_1:21664399-21664418 Msa0200960:three_prime_UTR 25.0%
!! GTGATTAAACATTGATTTGC+AGG + chr2_1:21658610-21658629 Msa0200960:intron 30.0%
CAAGTTTACATGATGTATTC+TGG + chr2_1:21658730-21658749 Msa0200960:intron 30.0%
ATATGGCAATTGTGATTGAT+TGG + chr2_1:21658807-21658826 Msa0200960:intron 30.0%
! TAATGGTTTTCCAATGTGTA+TGG + chr2_1:21658969-21658988 Msa0200960:intron 30.0%
!! AGATCTTCAGTTTAGGATTT+TGG + chr2_1:21659005-21659024 Msa0200960:intron 30.0%
AAAACTATATTGGCGCTATA+TGG - chr2_1:21659155-21659174 None:intergenic 30.0%
! TGTAGTGGAATTTGAACAAA+TGG - chr2_1:21659230-21659249 None:intergenic 30.0%
! GTTATTTGACAATACTGACT+TGG + chr2_1:21659260-21659279 Msa0200960:intron 30.0%
! ACTTTCCAGTTTTCAATATC+TGG - chr2_1:21659547-21659566 None:intergenic 30.0%
ATTCCAAAGAAAGAAAAAGC+CGG - chr2_1:21659688-21659707 None:intergenic 30.0%
TAAAGTAGGTCGATCTTAAT+TGG + chr2_1:21659837-21659856 Msa0200960:intron 30.0%
CATTGGTCATATTCCATATA+TGG - chr2_1:21659910-21659929 None:intergenic 30.0%
CATATATGGAATATGACCAA+TGG + chr2_1:21659908-21659927 Msa0200960:CDS 30.0%
!!! AATTTGCACTGCTGTTTTAA+GGG + chr2_1:21659931-21659950 Msa0200960:CDS 30.0%
ATACAATGACGAGATGTAAT+TGG - chr2_1:21660167-21660186 None:intergenic 30.0%
TCTCACTACATAGATAATTG+AGG - chr2_1:21660220-21660239 None:intergenic 30.0%
!!! ATGTTTCCTTTTTTTCAGCT+TGG + chr2_1:21660309-21660328 Msa0200960:intron 30.0%
! TCTGCAACATTTGATTTCTT+AGG + chr2_1:21660444-21660463 Msa0200960:CDS 30.0%
CCTTACAATATTATTGCCAT+CGG + chr2_1:21660603-21660622 Msa0200960:CDS 30.0%
!! AAAGTGTTGTAGATTTATCC+TGG + chr2_1:21660703-21660722 Msa0200960:CDS 30.0%
ATGCAACAACTAGAGATAAA+GGG - chr2_1:21660734-21660753 None:intergenic 30.0%
AATGCAACAACTAGAGATAA+AGG - chr2_1:21660735-21660754 None:intergenic 30.0%
TGCAAAAAGTGAATATCCAT+CGG - chr2_1:21660851-21660870 None:intergenic 30.0%
! CTATACTCTTTTTGCTTAAC+TGG - chr2_1:21661231-21661250 None:intergenic 30.0%
AGAATTATTCCAGAAGTAGT+TGG + chr2_1:21661270-21661289 Msa0200960:CDS 30.0%
ATGTGTTCAGAATAGACAAT+AGG - chr2_1:21661348-21661367 None:intergenic 30.0%
TCAGATTTAAAAGAACGTTC+TGG + chr2_1:21661444-21661463 Msa0200960:CDS 30.0%
CAGATTTAAAAGAACGTTCT+GGG + chr2_1:21661445-21661464 Msa0200960:CDS 30.0%
AGATTTAAAAGAACGTTCTG+GGG + chr2_1:21661446-21661465 Msa0200960:CDS 30.0%
! AGAGTATTTGATAAGAAAGG+AGG + chr2_1:21661612-21661631 Msa0200960:CDS 30.0%
GAGTATTTGATAAGAAAGGA+GGG + chr2_1:21661613-21661632 Msa0200960:CDS 30.0%
AGTATTTGATAAGAAAGGAG+GGG + chr2_1:21661614-21661633 Msa0200960:CDS 30.0%
AAACAGAAATTGTATGCACA+AGG + chr2_1:21661727-21661746 Msa0200960:CDS 30.0%
AACAGAAATTGTATGCACAA+GGG + chr2_1:21661728-21661747 Msa0200960:CDS 30.0%
CAACATTCCTGATATAAAGT+AGG + chr2_1:21661916-21661935 Msa0200960:intron 30.0%
TTAAATAGTGTGGAAAGTCT+TGG - chr2_1:21662016-21662035 None:intergenic 30.0%
CTTTCCACACTATTTAATGT+TGG + chr2_1:21662019-21662038 Msa0200960:intron 30.0%
TAAGCCAACATTAAATAGTG+TGG - chr2_1:21662026-21662045 None:intergenic 30.0%
TGTCCTAATTCGAATAATGT+TGG + chr2_1:21662085-21662104 Msa0200960:intron 30.0%
TCGAATAATGTTGGATTATG+TGG + chr2_1:21662094-21662113 Msa0200960:intron 30.0%
AAAACTATGGGTACAGTATA+TGG + chr2_1:21662182-21662201 Msa0200960:intron 30.0%
AAACTATGGGTACAGTATAT+GGG + chr2_1:21662183-21662202 Msa0200960:intron 30.0%
AGAAGATTTACACTAAGTGT+GGG + chr2_1:21662260-21662279 Msa0200960:intron 30.0%
TTCATCACAGTCTATAAATG+TGG - chr2_1:21662323-21662342 None:intergenic 30.0%
! AAAGGGATCCCTTTATTTAT+GGG + chr2_1:21662369-21662388 Msa0200960:CDS 30.0%
AAGAAGTCAATGAATCTTGA+AGG - chr2_1:21662417-21662436 None:intergenic 30.0%
!!! TACCTTCATTTTTAGTGGAT+GGG - chr2_1:21662459-21662478 None:intergenic 30.0%
!! TATGGTACCTTCATTTTTAG+TGG - chr2_1:21662464-21662483 None:intergenic 30.0%
CATTCAGTTGTTTGATATTG+CGG + chr2_1:21662489-21662508 Msa0200960:intron 30.0%
!! ATACTTGGTTTTTGACTAAG+TGG + chr2_1:21662512-21662531 Msa0200960:intron 30.0%
AAATTTGACCATATCTTTGC+AGG + chr2_1:21662622-21662641 Msa0200960:intron 30.0%
TAATAGTTCCTGCAAAGATA+TGG - chr2_1:21662633-21662652 None:intergenic 30.0%
ACTTGACATTCATGTCAAAT+AGG - chr2_1:21662723-21662742 None:intergenic 30.0%
! AAATATGGAATATCGACTAC+AGG - chr2_1:21662922-21662941 None:intergenic 30.0%
TGTTTGGTCATAAGAGAAAA+AGG - chr2_1:21662966-21662985 None:intergenic 30.0%
CAAACTCAACTAAGAATGTT+TGG - chr2_1:21662982-21663001 None:intergenic 30.0%
!! GTGCTACTCCAATATTTTTA+TGG + chr2_1:21663026-21663045 Msa0200960:intron 30.0%
! TTATGGGTCAATTTGTTTCT+AGG + chr2_1:21663043-21663062 Msa0200960:intron 30.0%
!!! TTTTTTTTGAGAGGACTTCT+AGG + chr2_1:21663086-21663105 Msa0200960:intron 30.0%
TATCTACAACAGAATGTGAT+AGG + chr2_1:21663176-21663195 Msa0200960:intron 30.0%
GTTAAAGTAGTTAAAGGATC+AGG - chr2_1:21663256-21663275 None:intergenic 30.0%
!! AGCTAAACTGGTTTGAATAA+GGG - chr2_1:21663278-21663297 None:intergenic 30.0%
!! TAGCTAAACTGGTTTGAATA+AGG - chr2_1:21663279-21663298 None:intergenic 30.0%
! AGACAACAAGCATATTTTGT+GGG - chr2_1:21663311-21663330 None:intergenic 30.0%
! TAGACAACAAGCATATTTTG+TGG - chr2_1:21663312-21663331 None:intergenic 30.0%
AAGTTACTTGAATCTGAAGA+TGG - chr2_1:21663964-21663983 None:intergenic 30.0%
AGATTCAAGTAACTTAGCAT+GGG + chr2_1:21663969-21663988 Msa0200960:CDS 30.0%
CTAAAGCTTACAAGAACAAA+AGG - chr2_1:21663997-21664016 None:intergenic 30.0%
TGAATTCATTTAGCAATCTC+TGG - chr2_1:21664208-21664227 None:intergenic 30.0%
GAGATTGCTAAATGAATTCA+TGG + chr2_1:21664208-21664227 Msa0200960:CDS 30.0%
CTATCTCATATTCAGATAAC+AGG - chr2_1:21664235-21664254 None:intergenic 30.0%
!! AAGTTGATGGGATAAATCAT+AGG - chr2_1:21664519-21664538 None:intergenic 30.0%
GACACATGTACACTAAAGAA+GGG - chr2_1:21658225-21658244 None:intergenic 35.0%
TGACACATGTACACTAAAGA+AGG - chr2_1:21658226-21658245 None:intergenic 35.0%
TGATTGCTGAAAAACCTAGT+TGG + chr2_1:21658415-21658434 Msa0200960:CDS 35.0%
! TTTTCCATTGATGTTCAACC+TGG + chr2_1:21658462-21658481 Msa0200960:CDS 35.0%
CAACAAACCATACACAAAGT+TGG - chr2_1:21658899-21658918 None:intergenic 35.0%
! AGCAAAGGTACAAACACATA+AGG - chr2_1:21658950-21658969 None:intergenic 35.0%
TGTGTTTGTACCTTTGCTAA+TGG + chr2_1:21658952-21658971 Msa0200960:intron 35.0%
CATTGGAAAACCATTAGCAA+AGG - chr2_1:21658965-21658984 None:intergenic 35.0%
! GTCAATTTTGCCATACACAT+TGG - chr2_1:21658982-21659001 None:intergenic 35.0%
TGACTTCAGATCTTCAGTTT+AGG + chr2_1:21658998-21659017 Msa0200960:intron 35.0%
!! TCAGTTTAGGATTTTGGATC+AGG + chr2_1:21659011-21659030 Msa0200960:intron 35.0%
TACAAATTGTTGCCGGATAA+AGG - chr2_1:21659181-21659200 None:intergenic 35.0%
ATAACAGCACTATAGTGTAG+TGG - chr2_1:21659245-21659264 None:intergenic 35.0%
AGATGAGAATGTGATTACGT+GGG - chr2_1:21659293-21659312 None:intergenic 35.0%
!!! ATTCTCATCTCTGTTTTTGC+AGG + chr2_1:21659303-21659322 Msa0200960:intron 35.0%
GAATATGAAATCTCTTGGTG+CGG + chr2_1:21659336-21659355 Msa0200960:CDS 35.0%
!! ATGGAAAGTTTGTTGCATCA+GGG + chr2_1:21659446-21659465 Msa0200960:CDS 35.0%
AGGCGATATTAATACATGAG+AGG + chr2_1:21659479-21659498 Msa0200960:CDS 35.0%
! TTCCAGTTTTCAATATCTGG+AGG - chr2_1:21659544-21659563 None:intergenic 35.0%
CGACCAATTAATTTCAATGC+CGG + chr2_1:21659666-21659685 Msa0200960:intron 35.0%
! AAGCCGGCATTGAAATTAAT+TGG - chr2_1:21659672-21659691 None:intergenic 35.0%
TATTTGTCCATGCGTAAAGT+AGG + chr2_1:21659823-21659842 Msa0200960:intron 35.0%
ACTAGCCAAAGAAGAATCAT+CGG - chr2_1:21659867-21659886 None:intergenic 35.0%
ATGATTCTTCTTTGGCTAGT+GGG + chr2_1:21659867-21659886 Msa0200960:CDS 35.0%
GGTCATATTCCATATATGGA+TGG - chr2_1:21659906-21659925 None:intergenic 35.0%
!!! GAATTTGCACTGCTGTTTTA+AGG + chr2_1:21659930-21659949 Msa0200960:CDS 35.0%
!!! ATTTGCACTGCTGTTTTAAG+GGG + chr2_1:21659932-21659951 Msa0200960:CDS 35.0%
TTATTTGGCGAACTAGTGAT+TGG + chr2_1:21660035-21660054 Msa0200960:intron 35.0%
GATAATTGAGGAGATATCTC+AGG - chr2_1:21660208-21660227 None:intergenic 35.0%
TAGTGAGATGTGAATGTGAT+TGG + chr2_1:21660232-21660251 Msa0200960:intron 35.0%
GTTGATCCAAGCTGAAAAAA+AGG - chr2_1:21660318-21660337 None:intergenic 35.0%
CATTTCATTACCACTACTCA+TGG + chr2_1:21660372-21660391 Msa0200960:CDS 35.0%
TTGAACCTCACCACAATTAT+CGG - chr2_1:21660480-21660499 None:intergenic 35.0%
AAAGAATTCTTCTAATGCCC+AGG + chr2_1:21660515-21660534 Msa0200960:CDS 35.0%
GCAATAATATTGTAAGGCTG+TGG - chr2_1:21660600-21660619 None:intergenic 35.0%
CCGATGGCAATAATATTGTA+AGG - chr2_1:21660606-21660625 None:intergenic 35.0%
TTAGCAACAAATAAAGGACG+GGG - chr2_1:21660669-21660688 None:intergenic 35.0%
CTTAGCAACAAATAAAGGAC+GGG - chr2_1:21660670-21660689 None:intergenic 35.0%
GCTTAGCAACAAATAAAGGA+CGG - chr2_1:21660671-21660690 None:intergenic 35.0%
TAGAGATAAAGGGAAATACC+AGG - chr2_1:21660724-21660743 None:intergenic 35.0%
CAAAAAGTGAATATCCATCG+GGG - chr2_1:21660849-21660868 None:intergenic 35.0%
GCAAAAAGTGAATATCCATC+GGG - chr2_1:21660850-21660869 None:intergenic 35.0%
!!! TTCACTTTTTGCATGTTCCT+TGG + chr2_1:21660858-21660877 Msa0200960:CDS 35.0%
!!! CATTTTGAGGCAAAAGAACT+TGG + chr2_1:21660901-21660920 Msa0200960:CDS 35.0%
AGCTTCTACCAAACAAACAT+CGG + chr2_1:21661035-21661054 Msa0200960:CDS 35.0%
! TAATTCTTTTACGGCCATCA+GGG - chr2_1:21661257-21661276 None:intergenic 35.0%
! ATAATTCTTTTACGGCCATC+AGG - chr2_1:21661258-21661277 None:intergenic 35.0%
TGACATAAGAGCTAGTACAT+TGG + chr2_1:21661401-21661420 Msa0200960:CDS 35.0%
GACATAAGAGCTAGTACATT+GGG + chr2_1:21661402-21661421 Msa0200960:CDS 35.0%
CTGGAACTTTCTCAATTATC+AGG - chr2_1:21661500-21661519 None:intergenic 35.0%
TCATTTACAGTGTGTTCTCT+TGG - chr2_1:21661672-21661691 None:intergenic 35.0%
ACACTGTAAATGACATTGCA+GGG + chr2_1:21661679-21661698 Msa0200960:CDS 35.0%
ACAGAAATTGTATGCACAAG+GGG + chr2_1:21661729-21661748 Msa0200960:CDS 35.0%
ATCAAACACTTTGGTCTGAT+AGG + chr2_1:21661754-21661773 Msa0200960:CDS 35.0%
TCCTGATATAAAGTAGGTTG+TGG + chr2_1:21661922-21661941 Msa0200960:intron 35.0%
ACCACAACCTACTTTATATC+AGG - chr2_1:21661926-21661945 None:intergenic 35.0%
TGTATAGAATGTGTGGTACA+TGG + chr2_1:21662139-21662158 Msa0200960:intron 35.0%
AACTATGGGTACAGTATATG+GGG + chr2_1:21662184-21662203 Msa0200960:intron 35.0%
GAGAAGATTTACACTAAGTG+TGG + chr2_1:21662259-21662278 Msa0200960:intron 35.0%
TTATAGACTGTGATGAATGC+TGG + chr2_1:21662326-21662345 Msa0200960:CDS 35.0%
! GAAAGGGATCCCTTTATTTA+TGG + chr2_1:21662368-21662387 Msa0200960:CDS 35.0%
AATCTTGAAGGAGACAAGTT+CGG - chr2_1:21662405-21662424 None:intergenic 35.0%
!!! TCATTTTTAGTGGATGGGTT+AGG - chr2_1:21662454-21662473 None:intergenic 35.0%
AACCCATCCACTAAAAATGA+AGG + chr2_1:21662454-21662473 Msa0200960:CDS 35.0%
!!! GTACCTTCATTTTTAGTGGA+TGG - chr2_1:21662460-21662479 None:intergenic 35.0%
TGTTTGATATTGCGGATACT+TGG + chr2_1:21662497-21662516 Msa0200960:intron 35.0%
! ATCATATTTTTCCCGATACG+AGG + chr2_1:21662543-21662562 Msa0200960:intron 35.0%
! TCATATTTTTCCCGATACGA+GGG + chr2_1:21662544-21662563 Msa0200960:intron 35.0%
TCATGTCAAATAGGAAAGCA+TGG - chr2_1:21662714-21662733 None:intergenic 35.0%
TTGACATGAATGTCAAGTGT+TGG + chr2_1:21662725-21662744 Msa0200960:CDS 35.0%
! AGTTTGGGTTCAATTCAAAG+TGG + chr2_1:21662799-21662818 Msa0200960:CDS 35.0%
CAGGCTCTGTAAAAAATAGA+TGG - chr2_1:21662903-21662922 None:intergenic 35.0%
! ACAACAAGCATATTTTGTGG+GGG - chr2_1:21663309-21663328 None:intergenic 35.0%
! GACAACAAGCATATTTTGTG+GGG - chr2_1:21663310-21663329 None:intergenic 35.0%
! TCTTGTGGTCTTTGTGATTT+TGG + chr2_1:21663826-21663845 Msa0200960:intron 35.0%
AAGCAGATGAATCTCGATTA+AGG + chr2_1:21663890-21663909 Msa0200960:CDS 35.0%
AGCAGATGAATCTCGATTAA+GGG + chr2_1:21663891-21663910 Msa0200960:CDS 35.0%
CAGATTCAAGTAACTTAGCA+TGG + chr2_1:21663968-21663987 Msa0200960:CDS 35.0%
TGATCCAAATCAAGACCAAA+TGG + chr2_1:21664256-21664275 Msa0200960:CDS 35.0%
TTGGTAAAATGAGAGCCATT+TGG - chr2_1:21664274-21664293 None:intergenic 35.0%
!! GAAGCAAGTTACAAGTTGAT+GGG - chr2_1:21664531-21664550 None:intergenic 35.0%
! AGAAGCAAGTTACAAGTTGA+TGG - chr2_1:21664532-21664551 None:intergenic 35.0%
TCATTACGACCAATTTGCGT+AGG + chr2_1:21658274-21658293 Msa0200960:five_prime_UTR 40.0%
TAGGAGATTCCTACGCAAAT+TGG - chr2_1:21658286-21658305 None:intergenic 40.0%
AATTTGCGTAGGAATCTCCT+AGG + chr2_1:21658285-21658304 Msa0200960:five_prime_UTR 40.0%
GTTGAAGGAACTTAGAACCT+AGG - chr2_1:21658305-21658324 None:intergenic 40.0%
GTTGAAATTGGGGAAGTTGA+AGG - chr2_1:21658320-21658339 None:intergenic 40.0%
TGGCAATTGTGATTGATTGG+CGG + chr2_1:21658810-21658829 Msa0200960:intron 40.0%
GATACTGCCAACTTTGTGTA+TGG + chr2_1:21658889-21658908 Msa0200960:intron 40.0%
GAGATGAGAATGTGATTACG+TGG - chr2_1:21659294-21659313 None:intergenic 40.0%
!! TGTTTTTGCAGGTTCGCATA+TGG + chr2_1:21659314-21659333 Msa0200960:intron 40.0%
AAAGTCTCGACACTTCTCAA+AGG + chr2_1:21659365-21659384 Msa0200960:CDS 40.0%
TTGGGTCTGTCAATTGTGTT+AGG + chr2_1:21659413-21659432 Msa0200960:CDS 40.0%
GTCTGTCAATTGTGTTAGGT+GGG + chr2_1:21659417-21659436 Msa0200960:CDS 40.0%
TGCAACAAACTTTCCATGCT+TGG - chr2_1:21659443-21659462 None:intergenic 40.0%
!! CATGGAAAGTTTGTTGCATC+AGG + chr2_1:21659445-21659464 Msa0200960:CDS 40.0%
TTAATACATGAGAGGAAGCC+TGG + chr2_1:21659487-21659506 Msa0200960:CDS 40.0%
AGCCTCCAGATATTGAAAAC+TGG + chr2_1:21659539-21659558 Msa0200960:CDS 40.0%
AAAGTTGTGATGACTCTGAG+AGG + chr2_1:21659562-21659581 Msa0200960:CDS 40.0%
! AAGTTGTGATGACTCTGAGA+GGG + chr2_1:21659563-21659582 Msa0200960:CDS 40.0%
!!! ATGCCGGCTTTTTCTTTCTT+TGG + chr2_1:21659682-21659701 Msa0200960:intron 40.0%
CTAGCCAAAGAAGAATCATC+GGG - chr2_1:21659866-21659885 None:intergenic 40.0%
GATGATTCTTCTTTGGCTAG+TGG + chr2_1:21659866-21659885 Msa0200960:CDS 40.0%
TGGACAACACCATCCATATA+TGG + chr2_1:21659894-21659913 Msa0200960:CDS 40.0%
AACAGCAGTGCAAATTCCAT+TGG - chr2_1:21659927-21659946 None:intergenic 40.0%
! CTTGCTATGAAAGAGCCAAT+AGG - chr2_1:21659992-21660011 None:intergenic 40.0%
GTGATTGGAGTCTTGCTTAT+AGG + chr2_1:21660050-21660069 Msa0200960:intron 40.0%
AGTCTTGCTTATAGGACTGA+TGG + chr2_1:21660058-21660077 Msa0200960:intron 40.0%
CTTATAGGACTGATGGTCAT+TGG + chr2_1:21660065-21660084 Msa0200960:intron 40.0%
! AGCTTGGATCAACCTTTTTC+AGG + chr2_1:21660325-21660344 Msa0200960:intron 40.0%
!!! TTGGATCAACCTTTTTCAGG+CGG + chr2_1:21660328-21660347 Msa0200960:intron 40.0%
! GTGGTAATGAAATGACCACA+TGG - chr2_1:21660366-21660385 None:intergenic 40.0%
CTTCTTGAAACCATGAGTAG+TGG - chr2_1:21660385-21660404 None:intergenic 40.0%
ATTCCCCTCTTTCAAGAACT+GGG - chr2_1:21660422-21660441 None:intergenic 40.0%
ACACAATGCTCCGATAATTG+TGG + chr2_1:21660467-21660486 Msa0200960:CDS 40.0%
AATTCTTCTAATGCCCAGGA+AGG + chr2_1:21660519-21660538 Msa0200960:CDS 40.0%
ATTCTTCTAATGCCCAGGAA+GGG + chr2_1:21660520-21660539 Msa0200960:CDS 40.0%
TATTATTGCCATCGGAAGTC+AGG + chr2_1:21660611-21660630 Msa0200960:CDS 40.0%
TAGTCCACACTGTTATTGTC+CGG - chr2_1:21660638-21660657 None:intergenic 40.0%
! CTTTTTGCATGTTCCTTGGA+TGG + chr2_1:21660862-21660881 Msa0200960:CDS 40.0%
! TGTGGGTGCATTTCATTTTG+AGG + chr2_1:21660888-21660907 Msa0200960:CDS 40.0%
GAGTTTAAATGATGCTGAGC+TGG + chr2_1:21660927-21660946 Msa0200960:CDS 40.0%
GAGTTGAAGAGAAGTCGTTA+TGG + chr2_1:21660952-21660971 Msa0200960:CDS 40.0%
!! CTTTTTGGCCGATGTTTGTT+TGG - chr2_1:21661046-21661065 None:intergenic 40.0%
CAAACAAACATCGGCCAAAA+AGG + chr2_1:21661044-21661063 Msa0200960:CDS 40.0%
! GACATTAGAAACCGCCTTTT+TGG - chr2_1:21661061-21661080 None:intergenic 40.0%
! TTGGCGTTGTCTTCTTTTGT+TGG - chr2_1:21661083-21661102 None:intergenic 40.0%
ACAAAAGAAGACAACGCCAA+AGG + chr2_1:21661083-21661102 Msa0200960:CDS 40.0%
! TCCTTAACGTCGTTAACTTG+AGG - chr2_1:21661147-21661166 None:intergenic 40.0%
TGCTTAACTGGACCAGAAAT+CGG - chr2_1:21661219-21661238 None:intergenic 40.0%
ATAAGAGCTAGTACATTGGG+AGG + chr2_1:21661405-21661424 Msa0200960:CDS 40.0%
GAGAAAGTTCCAGATACATC+CGG + chr2_1:21661507-21661526 Msa0200960:CDS 40.0%
AGGCATCAATGTTCAACAGA+TGG + chr2_1:21661536-21661555 Msa0200960:CDS 40.0%
GGCATCAATGTTCAACAGAT+GGG + chr2_1:21661537-21661556 Msa0200960:CDS 40.0%
TTTGATAAGAAAGGAGGGGA+CGG + chr2_1:21661618-21661637 Msa0200960:CDS 40.0%
CACACTGTAAATGACATTGC+AGG + chr2_1:21661678-21661697 Msa0200960:CDS 40.0%
CAGAAATTGTATGCACAAGG+GGG + chr2_1:21661730-21661749 Msa0200960:CDS 40.0%
AGAAATTGTATGCACAAGGG+GGG + chr2_1:21661731-21661750 Msa0200960:CDS 40.0%
CTTTGGTCTGATAGGATATC+AGG + chr2_1:21661762-21661781 Msa0200960:CDS 40.0%
!!! GGAAAAGTCACTGTTTTAGC+TGG + chr2_1:21661783-21661802 Msa0200960:CDS 40.0%
TGCAATGCCTACAATGATGA+TGG + chr2_1:21662288-21662307 Msa0200960:CDS 40.0%
GCAATGCCTACAATGATGAT+GGG + chr2_1:21662289-21662308 Msa0200960:CDS 40.0%
GATGATCCCATCATCATTGT+AGG - chr2_1:21662298-21662317 None:intergenic 40.0%
ATTGATGCTGGTGACAAGAA+AGG + chr2_1:21662351-21662370 Msa0200960:CDS 40.0%
TTGATGCTGGTGACAAGAAA+GGG + chr2_1:21662352-21662371 Msa0200960:CDS 40.0%
TCTGCAAAGCTATCAAAGTC+TGG + chr2_1:21662661-21662680 Msa0200960:CDS 40.0%
!! TGAATGTCAAGTGTTGGCTT+AGG + chr2_1:21662731-21662750 Msa0200960:CDS 40.0%
!! GAATGTCAAGTGTTGGCTTA+GGG + chr2_1:21662732-21662751 Msa0200960:CDS 40.0%
AGCTGGCAAAATTTGATGCA+GGG - chr2_1:21662774-21662793 None:intergenic 40.0%
! CATCAAATTTTGCCAGCTCT+TGG + chr2_1:21662776-21662795 Msa0200960:CDS 40.0%
TTCAATTCAAAGTGGTGAGC+TGG + chr2_1:21662807-21662826 Msa0200960:CDS 40.0%
! CAACAAGCATATTTTGTGGG+GGG - chr2_1:21663308-21663327 None:intergenic 40.0%
TTGGCAGAATGACTGATGAT+GGG + chr2_1:21663429-21663448 Msa0200960:intron 40.0%
AGCCAATTGAGCTTCCAAAT+GGG - chr2_1:21663468-21663487 None:intergenic 40.0%
AAGCCAATTGAGCTTCCAAA+TGG - chr2_1:21663469-21663488 None:intergenic 40.0%
!! TAGGCATTGGCGATATTCAT+TGG - chr2_1:21663513-21663532 None:intergenic 40.0%
GTACATAGGACAATAGGCAT+TGG - chr2_1:21663526-21663545 None:intergenic 40.0%
! GAAAGCGTACATAGGACAAT+AGG - chr2_1:21663532-21663551 None:intergenic 40.0%
TGCATGATAGCTACATCTTG+TGG + chr2_1:21663811-21663830 Msa0200960:intron 40.0%
ACCAACAAAACGTAGACGAT+TGG + chr2_1:21664064-21664083 Msa0200960:intron 40.0%
! ACCAATCGTCTACGTTTTGT+TGG - chr2_1:21664068-21664087 None:intergenic 40.0%
! TTTTCTTGCCGAATCTTTGC+AGG + chr2_1:21664118-21664137 Msa0200960:intron 40.0%
TTTCTTGCCGAATCTTTGCA+GGG + chr2_1:21664119-21664138 Msa0200960:intron 40.0%
GGAAGATATTCTTCCATCGA+TGG + chr2_1:21664166-21664185 Msa0200960:CDS 40.0%
!! AGAGCCATTTGGTCTTGATT+TGG - chr2_1:21664263-21664282 None:intergenic 40.0%
TGAACTGTTCTCAATCGGTT+TGG - chr2_1:21664315-21664334 None:intergenic 40.0%
GCTACTGAACTGTTCTCAAT+CGG - chr2_1:21664320-21664339 None:intergenic 40.0%
!! AGTACCTTTGAAGTGTGTGT+TGG - chr2_1:21664474-21664493 None:intergenic 40.0%
! ACCTAGTTGGCTTAGACATG+AGG + chr2_1:21658428-21658447 Msa0200960:CDS 45.0%
! CCTAGTTGGCTTAGACATGA+GGG + chr2_1:21658429-21658448 Msa0200960:CDS 45.0%
TCCATTGATGTTCAACCTGG+TGG + chr2_1:21658465-21658484 Msa0200960:CDS 45.0%
! TCCACCAGGTTGAACATCAA+TGG - chr2_1:21658469-21658488 None:intergenic 45.0%
GGTCTGTCAATTGTGTTAGG+TGG + chr2_1:21659416-21659435 Msa0200960:CDS 45.0%
GCATTCCAATAACGAGCTAG+AGG - chr2_1:21659768-21659787 None:intergenic 45.0%
AGATCGACCTACTTTACGCA+TGG - chr2_1:21659833-21659852 None:intergenic 45.0%
GTCTCCCGATGATTCTTCTT+TGG + chr2_1:21659859-21659878 Msa0200960:CDS 45.0%
TTCTTTGGCTAGTGGGAGTT+TGG + chr2_1:21659874-21659893 Msa0200960:CDS 45.0%
CTCATGGTTTCAAGAAGCCT+AGG + chr2_1:21660388-21660407 Msa0200960:CDS 45.0%
TTCCCCTCTTTCAAGAACTG+GGG - chr2_1:21660421-21660440 None:intergenic 45.0%
CATTCCCCTCTTTCAAGAAC+TGG - chr2_1:21660423-21660442 None:intergenic 45.0%
CAGTTCTTGAAAGAGGGGAA+TGG + chr2_1:21660421-21660440 Msa0200960:CDS 45.0%
ATGCTCCGATAATTGTGGTG+AGG + chr2_1:21660472-21660491 Msa0200960:CDS 45.0%
AGTCTCAGATTTCCCTTCCT+GGG - chr2_1:21660535-21660554 None:intergenic 45.0%
! GAAGGGAAATCTGAGACTGT+CGG + chr2_1:21660537-21660556 Msa0200960:CDS 45.0%
! AAGGGAAATCTGAGACTGTC+GGG + chr2_1:21660538-21660557 Msa0200960:CDS 45.0%
ATTGTAAGGCTGTGGCTCTT+TGG - chr2_1:21660592-21660611 None:intergenic 45.0%
ATGTTCCTTGGATGGATCTG+TGG + chr2_1:21660870-21660889 Msa0200960:CDS 45.0%
TGTTCCTTGGATGGATCTGT+GGG + chr2_1:21660871-21660890 Msa0200960:CDS 45.0%
! GCTTCTAGAAGTAACTGTGC+CGG - chr2_1:21661015-21661034 None:intergenic 45.0%
ACAAACATCGGCCAAAAAGG+CGG + chr2_1:21661047-21661066 Msa0200960:CDS 45.0%
CAAAGGCTTGTGTTAGTGCA+GGG + chr2_1:21661100-21661119 Msa0200960:CDS 45.0%
! AACGTCGTTAACTTGAGGCT+TGG - chr2_1:21661142-21661161 None:intergenic 45.0%
GCCTCAAGTTAACGACGTTA+AGG + chr2_1:21661143-21661162 Msa0200960:CDS 45.0%
GTTAACGACGTTAAGGAGAC+CGG + chr2_1:21661150-21661169 Msa0200960:CDS 45.0%
TGTAGGCAATGAGCCAAACA+TGG + chr2_1:21661179-21661198 Msa0200960:CDS 45.0%
CCAGTGGTTGTAACCATGTT+TGG - chr2_1:21661195-21661214 None:intergenic 45.0%
CCAAACATGGTTACAACCAC+TGG + chr2_1:21661192-21661211 Msa0200960:CDS 45.0%
! AAAGAGTATAGACGCCCTGA+TGG + chr2_1:21661240-21661259 Msa0200960:CDS 45.0%
GAAATGCTTTCCGGTTGAAC+AGG - chr2_1:21661300-21661319 None:intergenic 45.0%
! ATTAAGTTGCTGAGCTGCAC+TGG - chr2_1:21661322-21661341 None:intergenic 45.0%
TATCAGGCCGTCAGAAATTG+TGG - chr2_1:21661484-21661503 None:intergenic 45.0%
AACATTGATGCCTCCATCAC+CGG - chr2_1:21661529-21661548 None:intergenic 45.0%
! CGGTACTTCACCTGTTCTTT+TGG + chr2_1:21661638-21661657 Msa0200960:CDS 45.0%
TGTAAATGACATTGCAGGGC+TGG + chr2_1:21661683-21661702 Msa0200960:CDS 45.0%
TAGCTGGCAATGCGAATTTC+TGG + chr2_1:21661799-21661818 Msa0200960:CDS 45.0%
AGCTGGCAATGCGAATTTCT+GGG + chr2_1:21661800-21661819 Msa0200960:CDS 45.0%
! AATGCGAATTTCTGGGCTGT+TGG + chr2_1:21661807-21661826 Msa0200960:CDS 45.0%
! ATGCGAATTTCTGGGCTGTT+GGG + chr2_1:21661808-21661827 Msa0200960:CDS 45.0%
TGAATGCTGGACATTGATGC+TGG + chr2_1:21662339-21662358 Msa0200960:CDS 45.0%
AAGGCATGTTTCCCTCGTAT+CGG - chr2_1:21662558-21662577 None:intergenic 45.0%
GAGCTGGCAAAATTTGATGC+AGG - chr2_1:21662775-21662794 None:intergenic 45.0%
! TTTTGCCAGCTCTTGGAGTT+TGG + chr2_1:21662783-21662802 Msa0200960:CDS 45.0%
TTTGCCAGCTCTTGGAGTTT+GGG + chr2_1:21662784-21662803 Msa0200960:CDS 45.0%
!! AAATATTTGGCTCGGAAGCC+TGG + chr2_1:21662853-21662872 Msa0200960:CDS 45.0%
ATTACACACCTTGTCCAACC+AGG - chr2_1:21662874-21662893 None:intergenic 45.0%
AAGGATCAGGGTTCAAACTC+TGG - chr2_1:21663243-21663262 None:intergenic 45.0%
! GCATATTTTGTGGGGGGATT+GGG - chr2_1:21663302-21663321 None:intergenic 45.0%
! AGCATATTTTGTGGGGGGAT+TGG - chr2_1:21663303-21663322 None:intergenic 45.0%
CTTGGCAGAATGACTGATGA+TGG + chr2_1:21663428-21663447 Msa0200960:intron 45.0%
! TGGCAGAATGACTGATGATG+GGG + chr2_1:21663430-21663449 Msa0200960:intron 45.0%
TGCCCATTTGGAAGCTCAAT+TGG + chr2_1:21663463-21663482 Msa0200960:CDS 45.0%
! AGCTCAATTGGCTTCATCCT+TGG + chr2_1:21663475-21663494 Msa0200960:CDS 45.0%
! ATTGGCTTCATCCTTGGCTT+TGG + chr2_1:21663481-21663500 Msa0200960:CDS 45.0%
! TTGGCTTCATCCTTGGCTTT+GGG + chr2_1:21663482-21663501 Msa0200960:CDS 45.0%
! CCTTGCAAGAAAGCGTACAT+AGG - chr2_1:21663540-21663559 None:intergenic 45.0%
CCTATGTACGCTTTCTTGCA+AGG + chr2_1:21663537-21663556 Msa0200960:CDS 45.0%
GACAAAAAGCAAAGAGCGAG+AGG - chr2_1:21663699-21663718 None:intergenic 45.0%
TCGATTAAGGGAAGTCTGTG+AGG + chr2_1:21663903-21663922 Msa0200960:CDS 45.0%
CGATTAAGGGAAGTCTGTGA+GGG + chr2_1:21663904-21663923 Msa0200960:CDS 45.0%
CCTCATTCCCTGCAAAGATT+CGG - chr2_1:21664129-21664148 None:intergenic 45.0%
TGAGGAAACACAAGCTTCTC+AGG + chr2_1:21664144-21664163 Msa0200960:CDS 45.0%
GAGGAAACACAAGCTTCTCA+GGG + chr2_1:21664145-21664164 Msa0200960:CDS 45.0%
GTTGCTGGTGAAGATGACTT+TGG - chr2_1:21664293-21664312 None:intergenic 45.0%
!! TTCTCAATCGGTTTGGTTGC+TGG - chr2_1:21664308-21664327 None:intergenic 45.0%
CAGTTCAGTAGCAATCGACA+AGG + chr2_1:21664328-21664347 Msa0200960:CDS 45.0%
TTCAGTAGCAATCGACAAGG+AGG + chr2_1:21664331-21664350 Msa0200960:CDS 45.0%
AGCACCAACACACACTTCAA+AGG + chr2_1:21664467-21664486 Msa0200960:three_prime_UTR 45.0%
CCCTCATGTCTAAGCCAACT+AGG - chr2_1:21658432-21658451 None:intergenic 50.0%
GTAGCAAATCTGAGTCCACC+AGG - chr2_1:21658483-21658502 None:intergenic 50.0%
!! GGTGGACTCAGATTTGCTAC+TGG + chr2_1:21658483-21658502 Msa0200960:CDS 50.0%
!! GGACTCAGATTTGCTACTGG+TGG + chr2_1:21658486-21658505 Msa0200960:CDS 50.0%
!! CTCAGATTTGCTACTGGTGG+TGG + chr2_1:21658489-21658508 Msa0200960:CDS 50.0%
! GAAATCTCTTGGTGCGGACA+TGG + chr2_1:21659342-21659361 Msa0200960:CDS 50.0%
AAAGGCTTCTTGCAACCCTG+CGG + chr2_1:21659383-21659402 Msa0200960:CDS 50.0%
TGCATCAGGGTCTGATGATC+AGG + chr2_1:21659459-21659478 Msa0200960:CDS 50.0%
AATTCCGTGGTTCCTGAACC+AGG - chr2_1:21659508-21659527 None:intergenic 50.0%
GGTTCAGGAACCACGGAATT+TGG + chr2_1:21659508-21659527 Msa0200960:CDS 50.0%
! ACGTGCCTCTAGCTCGTTAT+TGG + chr2_1:21659760-21659779 Msa0200960:intron 50.0%
!! GGCCACTCTAGCCTTGTTAA+GGG + chr2_1:21659953-21659972 Msa0200960:CDS 50.0%
!! GCCACTCTAGCCTTGTTAAG+GGG + chr2_1:21659954-21659973 Msa0200960:CDS 50.0%
!! CCACTCTAGCCTTGTTAAGG+GGG + chr2_1:21659955-21659974 Msa0200960:CDS 50.0%
!!! TCAACCTTTTTCAGGCGGCT+TGG + chr2_1:21660333-21660352 Msa0200960:intron 50.0%
TCTGCCCCAGTTCTTGAAAG+AGG + chr2_1:21660414-21660433 Msa0200960:CDS 50.0%
CTGCCCCAGTTCTTGAAAGA+GGG + chr2_1:21660415-21660434 Msa0200960:CDS 50.0%
TGCCCCAGTTCTTGAAAGAG+GGG + chr2_1:21660416-21660435 Msa0200960:CDS 50.0%
CAGTCTCAGATTTCCCTTCC+TGG - chr2_1:21660536-21660555 None:intergenic 50.0%
TGGCTCTTTGGATCCAGTCT+TGG - chr2_1:21660580-21660599 None:intergenic 50.0%
AGGACCGGACAATAACAGTG+TGG + chr2_1:21660631-21660650 Msa0200960:CDS 50.0%
!!! TTTTGAAACAGGAGCCCCGA+TGG + chr2_1:21660832-21660851 Msa0200960:intron 50.0%
AGTCGTTATGGCGATGTGAG+TGG + chr2_1:21660964-21660983 Msa0200960:CDS 50.0%
CCTGCACTAACACAAGCCTT+TGG - chr2_1:21661102-21661121 None:intergenic 50.0%
CCAAAGGCTTGTGTTAGTGC+AGG + chr2_1:21661099-21661118 Msa0200960:CDS 50.0%
CTCATTGCCTACAGAACCTC+CGG - chr2_1:21661172-21661191 None:intergenic 50.0%
ACAACCACTGGTCCGATTTC+TGG + chr2_1:21661204-21661223 Msa0200960:CDS 50.0%
ACAGGCACTCCAACTACTTC+TGG - chr2_1:21661282-21661301 None:intergenic 50.0%
! AGTTGGAGTGCCTGTTCAAC+CGG + chr2_1:21661287-21661306 Msa0200960:CDS 50.0%
GCTGCACTGGAAATGCTTTC+CGG - chr2_1:21661309-21661328 None:intergenic 50.0%
!! AACGTTCTGGGGTTACTGCT+AGG + chr2_1:21661457-21661476 Msa0200960:CDS 50.0%
!! ACGTTCTGGGGTTACTGCTA+GGG + chr2_1:21661458-21661477 Msa0200960:CDS 50.0%
GCTAGGGCCACAATTTCTGA+CGG + chr2_1:21661474-21661493 Msa0200960:CDS 50.0%
GTTCCAGATACATCCGGTGA+TGG + chr2_1:21661513-21661532 Msa0200960:CDS 50.0%
GGACGTGCTTCCAAAAGAAC+AGG - chr2_1:21661651-21661670 None:intergenic 50.0%
CAAGGGGGGATCAAACACTT+TGG + chr2_1:21661745-21661764 Msa0200960:CDS 50.0%
GTGTGAAGATGGATGTCTGC+AGG + chr2_1:21661830-21661849 Msa0200960:CDS 50.0%
AGGCATGTTTCCCTCGTATC+GGG - chr2_1:21662557-21662576 None:intergenic 50.0%
TGTTGCCAACACAACAAGCG+GGG - chr2_1:21662689-21662708 None:intergenic 50.0%
GTGTTGCCAACACAACAAGC+GGG - chr2_1:21662690-21662709 None:intergenic 50.0%
CGTGTTGCCAACACAACAAG+CGG - chr2_1:21662691-21662710 None:intergenic 50.0%
TGAACCCAAACTCCAAGAGC+TGG - chr2_1:21662791-21662810 None:intergenic 50.0%
CAGGGTTCAAACTCTGGTGA+AGG - chr2_1:21663237-21663256 None:intergenic 50.0%
ATTGGCAGATCCCAAAGCCA+AGG - chr2_1:21663495-21663514 None:intergenic 50.0%
CTGGGGGAGTAGAAAACAAC+AGG - chr2_1:21663668-21663687 None:intergenic 50.0%
GCAAAGAGCGAGAGGATTAG+TGG - chr2_1:21663691-21663710 None:intergenic 50.0%
GAAGTCTGTGAGGGTTTCCT+TGG + chr2_1:21663913-21663932 Msa0200960:CDS 50.0%
GTTTCCTTGGACCTCCAACA+GGG + chr2_1:21663926-21663945 Msa0200960:CDS 50.0%
CCGAATCTTTGCAGGGAATG+AGG + chr2_1:21664126-21664145 Msa0200960:intron 50.0%
TTTCTGTTCGACGCCATCGA+TGG - chr2_1:21664182-21664201 None:intergenic 50.0%
GTAGCAATCGACAAGGAGGA+CGG + chr2_1:21664335-21664354 Msa0200960:CDS 50.0%
CGGTGCTCAAGCAAAGACAT+TGG + chr2_1:21664355-21664374 Msa0200960:CDS 50.0%
!! TACTGGTGGTGGTGACCACA+AGG + chr2_1:21658500-21658519 Msa0200960:CDS 55.0%
AAGGCTTCTTGCAACCCTGC+GGG + chr2_1:21659384-21659403 Msa0200960:CDS 55.0%
CAACCCTGCGGGATCACTTT+GGG + chr2_1:21659395-21659414 Msa0200960:CDS 55.0%
AGACCCAAAGTGATCCCGCA+GGG - chr2_1:21659401-21659420 None:intergenic 55.0%
TGTGTTAGGTGGGCCAAGCA+TGG + chr2_1:21659427-21659446 Msa0200960:CDS 55.0%
CATGAGAGGAAGCCTGGTTC+AGG + chr2_1:21659493-21659512 Msa0200960:CDS 55.0%
GAAGCCTGGTTCAGGAACCA+CGG + chr2_1:21659501-21659520 Msa0200960:CDS 55.0%
GGAACCACGGAATTTGGCAG+TGG + chr2_1:21659514-21659533 Msa0200960:CDS 55.0%
CTCTCCACTGCCAAATTCCG+TGG - chr2_1:21659521-21659540 None:intergenic 55.0%
!! GGGCCACTCTAGCCTTGTTA+AGG + chr2_1:21659952-21659971 Msa0200960:CDS 55.0%
CCCCCTTAACAAGGCTAGAG+TGG - chr2_1:21659958-21659977 None:intergenic 55.0%
CCTTGTTAAGGGGGTTGCGT+GGG + chr2_1:21659964-21659983 Msa0200960:CDS 55.0%
CCATCCAAGCCGCCTGAAAA+AGG - chr2_1:21660340-21660359 None:intergenic 55.0%
!!! CCTTTTTCAGGCGGCTTGGA+TGG + chr2_1:21660337-21660356 Msa0200960:intron 55.0%
AGAACTGGGGCAGAATGCCT+AGG - chr2_1:21660408-21660427 None:intergenic 55.0%
! GGAAATCTGAGACTGTCGGG+TGG + chr2_1:21660541-21660560 Msa0200960:CDS 55.0%
AGCAACGGTGCTTCCAAGAC+TGG + chr2_1:21660564-21660583 Msa0200960:CDS 55.0%
TTGCCATCGGAAGTCAGGAC+CGG + chr2_1:21660616-21660635 Msa0200960:CDS 55.0%
TGCACCCACAGATCCATCCA+AGG - chr2_1:21660878-21660897 None:intergenic 55.0%
AACGACGTTAAGGAGACCGG+AGG + chr2_1:21661153-21661172 Msa0200960:CDS 55.0%
AAGGAGACCGGAGGTTCTGT+AGG + chr2_1:21661162-21661181 Msa0200960:CDS 55.0%
TGGACCAGAAATCGGACCAG+TGG - chr2_1:21661211-21661230 None:intergenic 55.0%
CCTCCATCACCGGATGTATC+TGG - chr2_1:21661519-21661538 None:intergenic 55.0%
! CCAGATACATCCGGTGATGG+AGG + chr2_1:21661516-21661535 Msa0200960:CDS 55.0%
TGGGCTGTTGGGTGTGAAGA+TGG + chr2_1:21661819-21661838 Msa0200960:CDS 55.0%
!! TGGTTCCCCGCTTGTTGTGT+TGG + chr2_1:21662681-21662700 Msa0200960:CDS 55.0%
! TGGTGAGCTGGCTGCTTTAC+AGG + chr2_1:21662819-21662838 Msa0200960:CDS 55.0%
!! ATTTGGCTCGGAAGCCTGGT+TGG + chr2_1:21662857-21662876 Msa0200960:CDS 55.0%
GGGGGATTGGGTAGCTAAAC+TGG - chr2_1:21663290-21663309 None:intergenic 55.0%
! AGCGAGAGGATTAGTGGCTG+GGG - chr2_1:21663685-21663704 None:intergenic 55.0%
! GAGCGAGAGGATTAGTGGCT+GGG - chr2_1:21663686-21663705 None:intergenic 55.0%
! AGAGCGAGAGGATTAGTGGC+TGG - chr2_1:21663687-21663706 None:intergenic 55.0%
GGTTTCCTTGGACCTCCAAC+AGG + chr2_1:21663925-21663944 Msa0200960:CDS 55.0%
GCAACCCTGCGGGATCACTT+TGG + chr2_1:21659394-21659413 Msa0200960:CDS 60.0%
CAGACCCAAAGTGATCCCGC+AGG - chr2_1:21659402-21659421 None:intergenic 60.0%
!! GAGAGGGCACTCTGCTGATG+TGG + chr2_1:21659579-21659598 Msa0200960:CDS 60.0%
! GCCTTGTTAAGGGGGTTGCG+TGG + chr2_1:21659963-21659982 Msa0200960:CDS 60.0%
CCCACGCAACCCCCTTAACA+AGG - chr2_1:21659967-21659986 None:intergenic 60.0%
GGGGTTGCGTGGGATCCTAT+TGG + chr2_1:21659974-21659993 Msa0200960:CDS 60.0%
! CGGCTTGGATGGTCTCCATG+TGG + chr2_1:21660348-21660367 Msa0200960:CDS 60.0%
GAGACTGTCGGGTGGAGCAA+CGG + chr2_1:21660549-21660568 Msa0200960:CDS 60.0%
TGTCCGGTCCTGACTTCCGA+TGG - chr2_1:21660622-21660641 None:intergenic 60.0%
CTCGGAAGCCTGGTTGGACA+AGG + chr2_1:21662863-21662882 Msa0200960:CDS 60.0%
GGTGCAGACACGTGCCCATT+TGG + chr2_1:21663451-21663470 Msa0200960:CDS 60.0%
! GCGAGAGGATTAGTGGCTGG+GGG - chr2_1:21663684-21663703 None:intergenic 60.0%
CCATCCCTGTTGGAGGTCCA+AGG - chr2_1:21663933-21663952 None:intergenic 60.0%
CCTTGGACCTCCAACAGGGA+TGG + chr2_1:21663930-21663949 Msa0200960:CDS 60.0%
ACCTCCAACAGGGATGGCTG+AGG + chr2_1:21663936-21663955 Msa0200960:CDS 60.0%
TCCTCAGCCATCCCTGTTGG+AGG - chr2_1:21663940-21663959 None:intergenic 60.0%
GGTTCCTCAGCCATCCCTGT+TGG - chr2_1:21663943-21663962 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 21658172 21664602 21658172 ID=Msa0200960;Name=Msa0200960
chr2_1 mRNA 21658172 21664602 21658172 ID=Msa0200960-mRNA-1;Parent=Msa0200960;Name=Msa0200960-mRNA-1;_AED=0.05;_eAED=0.05;_QI=242|0.88|0.8|1|1|1|10|220|958
chr2_1 exon 21658172 21658521 21658172 ID=Msa0200960-mRNA-1:exon:8698;Parent=Msa0200960-mRNA-1
chr2_1 exon 21659325 21659600 21659325 ID=Msa0200960-mRNA-1:exon:8699;Parent=Msa0200960-mRNA-1
chr2_1 exon 21659845 21660014 21659845 ID=Msa0200960-mRNA-1:exon:8700;Parent=Msa0200960-mRNA-1
chr2_1 exon 21660347 21660724 21660347 ID=Msa0200960-mRNA-1:exon:8701;Parent=Msa0200960-mRNA-1
chr2_1 exon 21660843 21661851 21660843 ID=Msa0200960-mRNA-1:exon:8702;Parent=Msa0200960-mRNA-1
chr2_1 exon 21662265 21662475 21662265 ID=Msa0200960-mRNA-1:exon:8703;Parent=Msa0200960-mRNA-1
chr2_1 exon 21662644 21662884 21662644 ID=Msa0200960-mRNA-1:exon:8704;Parent=Msa0200960-mRNA-1
chr2_1 exon 21663436 21663558 21663436 ID=Msa0200960-mRNA-1:exon:8705;Parent=Msa0200960-mRNA-1
chr2_1 exon 21663888 21664005 21663888 ID=Msa0200960-mRNA-1:exon:8706;Parent=Msa0200960-mRNA-1
chr2_1 exon 21664140 21664602 21664140 ID=Msa0200960-mRNA-1:exon:8707;Parent=Msa0200960-mRNA-1
chr2_1 five_prime_UTR 21658172 21658413 21658172 ID=Msa0200960-mRNA-1:five_prime_utr;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21658414 21658521 21658414 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21659325 21659600 21659325 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21659845 21660014 21659845 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21660347 21660724 21660347 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21660843 21661851 21660843 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21662265 21662475 21662265 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21662644 21662884 21662644 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21663436 21663558 21663436 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21663888 21664005 21663888 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 CDS 21664140 21664382 21664140 ID=Msa0200960-mRNA-1:cds;Parent=Msa0200960-mRNA-1
chr2_1 three_prime_UTR 21664383 21664602 21664383 ID=Msa0200960-mRNA-1:three_prime_utr;Parent=Msa0200960-mRNA-1
Gene Sequence

>Msa0200960

ATGATTGCTGAAAAACCTAGTTGGCTTAGACATGAGGGTATGCAAATTTTTTCCATTGATGTTCAACCTGGTGGACTCAGATTTGCTACTGGTGGTGGTGACCACAAGGTTCGCATATGGAATATGAAATCTCTTGGTGCGGACATGGAAAGTCTCGACACTTCTCAAAGGCTTCTTGCAACCCTGCGGGATCACTTTGGGTCTGTCAATTGTGTTAGGTGGGCCAAGCATGGAAAGTTTGTTGCATCAGGGTCTGATGATCAGGCGATATTAATACATGAGAGGAAGCCTGGTTCAGGAACCACGGAATTTGGCAGTGGAGAGCCTCCAGATATTGAAAACTGGAAAGTTGTGATGACTCTGAGAGGGCACTCTGCTGATGTGGTCGATCTTAATTGGTCTCCCGATGATTCTTCTTTGGCTAGTGGGAGTTTGGACAACACCATCCATATATGGAATATGACCAATGGAATTTGCACTGCTGTTTTAAGGGGCCACTCTAGCCTTGTTAAGGGGGTTGCGTGGGATCCTATTGGCTCTTTCATAGCAAGTCAGCGGCTTGGATGGTCTCCATGTGGTCATTTCATTACCACTACTCATGGTTTCAAGAAGCCTAGGCATTCTGCCCCAGTTCTTGAAAGAGGGGAATGGTCTGCAACATTTGATTTCTTAGGACACAATGCTCCGATAATTGTGGTGAGGTTCAACCATTTTCTGTTCAAAAAGAATTCTTCTAATGCCCAGGAAGGGAAATCTGAGACTGTCGGGTGGAGCAACGGTGCTTCCAAGACTGGATCCAAAGAGCCACAGCCTTACAATATTATTGCCATCGGAAGTCAGGACCGGACAATAACAGTGTGGACTACTGCAAGTCCCCGTCCTTTATTTGTTGCTAAGCATTTTTTTACTCAAAGTGTTGTAGATTTATCCTGGAGCCCCGATGGATATTCACTTTTTGCATGTTCCTTGGATGGATCTGTGGGTGCATTTCATTTTGAGGCAAAAGAACTTGGTCAGAGTTTAAATGATGCTGAGCTGGATGAGTTGAAGAGAAGTCGTTATGGCGATGTGAGTGGTCGTAAAATTAATTTAGCAGAAAGTCCGGCACAGTTACTTCTAGAAGCAGCTTCTACCAAACAAACATCGGCCAAAAAGGCGGTTTCTAATGTCCAACAAAAGAAGACAACGCCAAAGGCTTGTGTTAGTGCAGGGAACACTACAAAGAATTCCAAGCCTCAAGTTAACGACGTTAAGGAGACCGGAGGTTCTGTAGGCAATGAGCCAAACATGGTTACAACCACTGGTCCGATTTCTGGTCCAGTTAAGCAAAAAGAGTATAGACGCCCTGATGGCCGTAAAAGAATTATTCCAGAAGTAGTTGGAGTGCCTGTTCAACCGGAAAGCATTTCCAGTGCAGCTCAGCAACTTAATTTTCCTATTGTCTATTCTGAACACATAAAGAGTTCTGACAGAGCTATTTCTAATAATGATGACATAAGAGCTAGTACATTGGGAGGATCACATATTAGACATTCAGATTTAAAAGAACGTTCTGGGGTTACTGCTAGGGCCACAATTTCTGACGGCCTGATAATTGAGAAAGTTCCAGATACATCCGGTGATGGAGGCATCAATGTTCAACAGATGGGAAATTCAATGACTTCTAATTCTTTAGCTGCTTGTAGTTCTACACTTTCTATTAGAGTATTTGATAAGAAAGGAGGGGACGGTACTTCACCTGTTCTTTTGGAAGCACGTCCAAGAGAACACACTGTAAATGACATTGCAGGGCTGGCAAATACGCCAATGATGAAAGAAACAGAAATTGTATGCACAAGGGGGGATCAAACACTTTGGTCTGATAGGATATCAGGAAAAGTCACTGTTTTAGCTGGCAATGCGAATTTCTGGGCTGTTGGGTGTGAAGATGGATGTCTGCAGATTTACACTAAGTGTGGGAGACGTGCAATGCCTACAATGATGATGGGATCATCTGCCACATTTATAGACTGTGATGAATGCTGGACATTGATGCTGGTGACAAGAAAGGGATCCCTTTATTTATGGGATTTATTGAACCGAACTTGTCTCCTTCAAGATTCATTGACTTCTTTAGTTGCTTCAAGTCCTAACCCATCCACTAAAAATGAAGGAACTATTAAAGTTATTTCTGCAAAGCTATCAAAGTCTGGTTCCCCGCTTGTTGTGTTGGCAACACGCCATGCTTTCCTATTTGACATGAATGTCAAGTGTTGGCTTAGGGTTGCAGATGATAGCTTCCCTGCATCAAATTTTGCCAGCTCTTGGAGTTTGGGTTCAATTCAAAGTGGTGAGCTGGCTGCTTTACAGGTTGATCTTAGAAAATATTTGGCTCGGAAGCCTGGTTGGACAAGAATGACTGATGATGGGGTGCAGACACGTGCCCATTTGGAAGCTCAATTGGCTTCATCCTTGGCTTTGGGATCTGCCAATGAATATCGCCAATGCCTATTGTCCTATGTACGCTTTCTTGCAAGGGAAGCAGATGAATCTCGATTAAGGGAAGTCTGTGAGGGTTTCCTTGGACCTCCAACAGGGATGGCTGAGGAACCATCTTCAGATTCAAGTAACTTAGCATGGGATCCTTTTGTTCTTGGAATGAGGAAACACAAGCTTCTCAGGGAAGATATTCTTCCATCGATGGCGTCGAACAGAAAAGTCCAGAGATTGCTAAATGAATTCATGGACCTGTTATCTGAATATGAGATAGTTGATCCAAATCAAGACCAAATGGCTCTCATTTTACCAAAGTCATCTTCACCAGCAACCAAACCGATTGAGAACAGTTCAGTAGCAATCGACAAGGAGGACGGTGCTCAAGCAAAGACATTGGATTAA
Protein sequence

>Msa0200960

MIAEKPSWLRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSLGADMESLDTSQRLLATLRDHFGSVNCVRWAKHGKFVASGSDDQAILIHERKPGSGTTEFGSGEPPDIENWKVVMTLRGHSADVVDLNWSPDDSSLASGSLDNTIHIWNMTNGICTAVLRGHSSLVKGVAWDPIGSFIASQRLGWSPCGHFITTTHGFKKPRHSAPVLERGEWSATFDFLGHNAPIIVVRFNHFLFKKNSSNAQEGKSETVGWSNGASKTGSKEPQPYNIIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVGAFHFEAKELGQSLNDAELDELKRSRYGDVSGRKINLAESPAQLLLEAASTKQTSAKKAVSNVQQKKTTPKACVSAGNTTKNSKPQVNDVKETGGSVGNEPNMVTTTGPISGPVKQKEYRRPDGRKRIIPEVVGVPVQPESISSAAQQLNFPIVYSEHIKSSDRAISNNDDIRASTLGGSHIRHSDLKERSGVTARATISDGLIIEKVPDTSGDGGINVQQMGNSMTSNSLAACSSTLSIRVFDKKGGDGTSPVLLEARPREHTVNDIAGLANTPMMKETEIVCTRGDQTLWSDRISGKVTVLAGNANFWAVGCEDGCLQIYTKCGRRAMPTMMMGSSATFIDCDECWTLMLVTRKGSLYLWDLLNRTCLLQDSLTSLVASSPNPSTKNEGTIKVISAKLSKSGSPLVVLATRHAFLFDMNVKCWLRVADDSFPASNFASSWSLGSIQSGELAALQVDLRKYLARKPGWTRMTDDGVQTRAHLEAQLASSLALGSANEYRQCLLSYVRFLAREADESRLREVCEGFLGPPTGMAEEPSSDSSNLAWDPFVLGMRKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYEIVDPNQDQMALILPKSSSPATKPIENSSVAIDKEDGAQAKTLD*