Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335870 | XP_003596786.1 | 93.246 | 992 | 33 | 1 | 1 | 958 | 1 | 992 | 0.0 | 1894 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335870 | sp|Q9LXN4|HIRA_ARATH | 67.554 | 977 | 253 | 11 | 1 | 934 | 1 | 956 | 0.0 | 1297 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036870 | Msa0335870 | 0.805819 | 1.110152e-49 | -8.615850e-47 |
| Msa0057420 | Msa0335870 | 0.804082 | 2.561707e-49 | -8.615850e-47 |
| Msa0136650 | Msa0335870 | 0.829667 | 4.527537e-55 | -8.615850e-47 |
| Msa0174450 | Msa0335870 | 0.817830 | 2.690846e-52 | -8.615850e-47 |
| Msa0200960 | Msa0335870 | 0.818112 | 2.323190e-52 | -8.615850e-47 |
| Msa0225460 | Msa0335870 | 0.830871 | 2.300132e-55 | -8.615850e-47 |
| Msa0225680 | Msa0335870 | 0.833573 | 4.935413e-56 | -8.615850e-47 |
| Msa0258680 | Msa0335870 | 0.830680 | 2.562535e-55 | -8.615850e-47 |
| Msa0261340 | Msa0335870 | 0.810900 | 9.158394e-51 | -8.615850e-47 |
| Msa0267110 | Msa0335870 | 0.801840 | 7.448484e-49 | -8.615850e-47 |
| Msa0292400 | Msa0335870 | 0.807019 | 6.202188e-50 | -8.615850e-47 |
| Msa0297930 | Msa0335870 | 0.991437 | 1.209150e-187 | -8.615850e-47 |
| Msa0335870 | Msa0380620 | 0.818826 | 1.600629e-52 | -8.615850e-47 |
| Msa0335870 | Msa0397150 | 0.808784 | 2.613002e-50 | -8.615850e-47 |
| Msa0335870 | Msa0417880 | 0.801862 | 7.369064e-49 | -8.615850e-47 |
| Msa0335870 | Msa0428150 | 0.808660 | 2.777512e-50 | -8.615850e-47 |
| Msa0335870 | Msa0430260 | 0.833295 | 5.790886e-56 | -8.615850e-47 |
| Msa0335870 | Msa0462500 | 0.813840 | 2.088192e-51 | -8.615850e-47 |
| Msa0335870 | Msa0464680 | 0.804518 | 2.078347e-49 | -8.615850e-47 |
| Msa0335870 | Msa0500380 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0335870 | Msa0524190 | 0.808071 | 3.707569e-50 | -8.615850e-47 |
| Msa0335870 | Msa0527700 | 0.985936 | 3.848862e-165 | -8.615850e-47 |
| Msa0335870 | Msa0546680 | 0.800300 | 1.537643e-48 | -8.615850e-47 |
| Msa0335870 | Msa0626450 | 0.823864 | 1.101103e-53 | -8.615850e-47 |
| Msa0335870 | Msa0626490 | 0.824742 | 6.846635e-54 | -8.615850e-47 |
| Msa0335870 | Msa0639430 | 0.800540 | 1.373849e-48 | -8.615850e-47 |
| Msa0335870 | Msa0664600 | 0.827990 | 1.152982e-54 | -8.615850e-47 |
| Msa0335870 | Msa0689520 | 0.807185 | 5.719730e-50 | -8.615850e-47 |
| Msa0335870 | Msa0754520 | 0.813864 | 2.062723e-51 | -8.615850e-47 |
| Msa0335870 | Msa0795560 | 0.807627 | 4.609193e-50 | -8.615850e-47 |
| Msa0335870 | Msa0833220 | 0.808156 | 3.556891e-50 | -8.615850e-47 |
| Msa0335870 | Msa0880680 | 0.813797 | 2.134050e-51 | -8.615850e-47 |
| Msa0335870 | Msa1004800 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
| Msa0335870 | Msa1029250 | 0.805310 | 1.420010e-49 | -8.615850e-47 |
| Msa0335870 | Msa1047080 | 0.817549 | 3.113440e-52 | -8.615850e-47 |
| Msa0335870 | Msa1113340 | 0.812356 | 4.417958e-51 | -8.615850e-47 |
| Msa0335870 | Msa1229500 | 0.802980 | 4.335740e-49 | -8.615850e-47 |
| Msa0335870 | Msa1268670 | 0.817389 | 3.382758e-52 | -8.615850e-47 |
| Msa0335870 | Msa1269480 | 0.806260 | 8.966894e-50 | -8.615850e-47 |
| Msa0335870 | Msa1367370 | 0.813225 | 2.850595e-51 | -8.615850e-47 |
| Msa0335870 | Msa1369550 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0335870 | Msa1373650 | 0.804220 | 2.398340e-49 | -8.615850e-47 |
| Msa0335870 | Msa1422420 | 0.826603 | 2.477844e-54 | -8.615850e-47 |
| Msa0335870 | Msa1440960 | 0.822376 | 2.448314e-53 | -8.615850e-47 |
| Msa0335870 | Msa1443110 | 0.811172 | 7.995464e-51 | -8.615850e-47 |
| Msa0335870 | Msa1454140 | 0.804508 | 2.088427e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335870 | MtrunA17_Chr2g0321211 | 93.246 | 992 | 33 | 1 | 1 | 958 | 1 | 992 | 0.0 | 1894 |
| Msa0335870 | MtrunA17_Chr4g0026671 | 76.923 | 988 | 175 | 9 | 1 | 941 | 1 | 982 | 0.0 | 1514 |
| Msa0335870 | MtrunA17_Chr8g0384161 | 25.521 | 384 | 210 | 9 | 11 | 338 | 11 | 374 | 1.82e-27 | 119 |
| Msa0335870 | MtrunA17_Chr3g0136971 | 26.627 | 169 | 96 | 2 | 16 | 184 | 464 | 604 | 3.85e-15 | 80.1 |
| Msa0335870 | MtrunA17_Chr5g0414581 | 33.333 | 165 | 101 | 4 | 16 | 174 | 246 | 407 | 1.74e-12 | 70.9 |
| Msa0335870 | MtrunA17_Chr5g0401661 | 23.770 | 244 | 135 | 4 | 16 | 220 | 399 | 630 | 1.26e-11 | 68.6 |
| Msa0335870 | MtrunA17_Chr8g0352821 | 27.528 | 178 | 99 | 4 | 9 | 184 | 305 | 454 | 1.83e-11 | 68.2 |
| Msa0335870 | MtrunA17_Chr4g0053651 | 24.180 | 244 | 134 | 4 | 16 | 220 | 292 | 523 | 2.41e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335870 | AT3G44530.2 | 67.554 | 977 | 253 | 11 | 1 | 934 | 1 | 956 | 0.0 | 1297 |
| Msa0335870 | AT3G44530.1 | 65.381 | 1011 | 252 | 13 | 1 | 934 | 1 | 990 | 0.0 | 1276 |
| Msa0335870 | AT3G44530.3 | 65.274 | 838 | 227 | 11 | 140 | 934 | 2 | 818 | 0.0 | 1048 |
| Msa0335870 | AT3G44530.4 | 65.674 | 705 | 212 | 10 | 239 | 934 | 1 | 684 | 0.0 | 876 |
| Msa0335870 | AT5G64630.1 | 33.708 | 178 | 103 | 3 | 7 | 184 | 9 | 171 | 1.90e-26 | 113 |
| Msa0335870 | AT5G64630.2 | 33.708 | 178 | 103 | 3 | 7 | 184 | 9 | 171 | 2.09e-26 | 114 |
| Msa0335870 | AT5G64630.3 | 36.134 | 119 | 60 | 2 | 66 | 184 | 10 | 112 | 7.73e-17 | 84.7 |
| Msa0335870 | AT5G64630.3 | 21.322 | 469 | 271 | 13 | 28 | 460 | 20 | 426 | 8.48e-14 | 75.1 |
| Msa0335870 | AT5G25150.1 | 26.627 | 169 | 96 | 2 | 16 | 184 | 463 | 603 | 5.57e-13 | 73.6 |
| Msa0335870 | AT5G25150.2 | 26.627 | 169 | 96 | 2 | 16 | 184 | 463 | 603 | 6.20e-13 | 73.2 |
| Msa0335870 | AT5G67320.1 | 24.082 | 245 | 133 | 5 | 16 | 220 | 327 | 558 | 7.76e-12 | 69.7 |
Find 286 sgRNAs with CRISPR-Local
Find 490 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGGGATCCCTTTATTTA+TGG | 0.139689 | 2_4:-55091137 | Msa0335870:CDS |
| TAGCTGGCAATGCGAATTTC+TGG | 0.141884 | 2_4:-55091706 | Msa0335870:CDS |
| ATTCAATAAAATTCAGATTC+TGG | 0.196777 | 2_4:-55095247 | Msa0335870:five_prime_UTR |
| TTCTTGTACAATATCAAATA+AGG | 0.199358 | 2_4:-55088957 | Msa0335870:three_prime_UTR |
| ACAACCACTGGTCCGATTTC+TGG | 0.200258 | 2_4:-55092301 | Msa0335870:CDS |
| GGTTGATCTTAGAAAATATT+TGG | 0.216861 | 2_4:-55090665 | Msa0335870:CDS |
| GGTTCAGGAACCACGGAATT+TGG | 0.227590 | 2_4:-55093985 | Msa0335870:CDS |
| TGGTGAGCTGGCTGCTTTAC+AGG | 0.228132 | 2_4:-55090686 | Msa0335870:CDS |
| CATTGGTCATATTCCATATA+TGG | 0.235722 | 2_4:+55093598 | None:intergenic |
| GCTGCACTGGAAATGCTTTC+CGG | 0.257391 | 2_4:+55092199 | None:intergenic |
| ATTGGCTTCATCCTTGGCTT+TGG | 0.269759 | 2_4:-55090024 | Msa0335870:CDS |
| TTCTCAATCGGTTTGGTTGC+TGG | 0.269994 | 2_4:+55089200 | None:intergenic |
| TTCTTTGGCTAGTGGGAGTT+TGG | 0.270435 | 2_4:-55093631 | Msa0335870:CDS |
| TCAATAAATCCCATAAATAA+AGG | 0.277011 | 2_4:+55091127 | None:intergenic |
| GTCTCCCGATGATTCTTCTT+TGG | 0.279960 | 2_4:-55093646 | Msa0335870:CDS |
| CGGTACTTCACCTGTTCTTT+TGG | 0.282161 | 2_4:-55091867 | Msa0335870:CDS |
| TTTGCCAGCTCTTGGAGTTT+GGG | 0.286804 | 2_4:-55090721 | Msa0335870:CDS |
| CAGTCTCAGATTTCCCTTCC+TGG | 0.289618 | 2_4:+55092972 | None:intergenic |
| TTGGCTTCATCCTTGGCTTT+GGG | 0.291343 | 2_4:-55090023 | Msa0335870:CDS |
| TCTGCAACATTTGATTTCTT+AGG | 0.300556 | 2_4:-55093061 | Msa0335870:CDS |
| CAAACAAACATCGGCCAAAA+AGG | 0.301152 | 2_4:-55092461 | Msa0335870:CDS |
| AAGCAGATGAATCTCGATTA+AGG | 0.302876 | 2_4:-55089615 | Msa0335870:CDS |
| CCTCCATCACCGGATGTATC+TGG | 0.303980 | 2_4:+55091989 | None:intergenic |
| ACTTGACATTCATGTCAAAT+AGG | 0.306960 | 2_4:+55090785 | None:intergenic |
| AGAGCCATTTGGTCTTGATT+TGG | 0.310069 | 2_4:+55089245 | None:intergenic |
| TCAGATTTAAAAGAACGTTC+TGG | 0.312424 | 2_4:-55092061 | Msa0335870:CDS |
| ACAGGCACTCCAACTACTTC+TGG | 0.316367 | 2_4:+55092226 | None:intergenic |
| ATTGTAAGGCTGTGGCTCTT+TGG | 0.317518 | 2_4:+55092916 | None:intergenic |
| CTGGAACTTTCTCAATTATC+AGG | 0.318871 | 2_4:+55092008 | None:intergenic |
| AAAGGGATCCCTTTATTTAT+GGG | 0.322149 | 2_4:-55091136 | Msa0335870:CDS |
| TAAAGTAGGTCGATCTTAAT+TGG | 0.324735 | 2_4:-55093668 | Msa0335870:intron |
| CATTCCCCTCTTTCAAGAAC+TGG | 0.335731 | 2_4:+55093085 | None:intergenic |
| CAACCCTGCGGGATCACTTT+GGG | 0.337199 | 2_4:-55094098 | Msa0335870:CDS |
| CTTTGGTCTGATAGGATATC+AGG | 0.345362 | 2_4:-55091743 | Msa0335870:CDS |
| TTCAATAAAATTCAGATTCT+GGG | 0.347529 | 2_4:-55095246 | Msa0335870:five_prime_UTR |
| CATGGAAAGTTTGTTGCATC+AGG | 0.347917 | 2_4:-55094048 | Msa0335870:CDS |
| TTGGGTCTGTCAATTGTGTT+AGG | 0.354364 | 2_4:-55094080 | Msa0335870:CDS |
| AGCTCAATTGGCTTCATCCT+TGG | 0.355062 | 2_4:-55090030 | Msa0335870:CDS |
| TGAGGAAACACAAGCTTCTC+AGG | 0.360196 | 2_4:-55089361 | Msa0335870:CDS |
| AGCTGGCAATGCGAATTTCT+GGG | 0.370285 | 2_4:-55091705 | Msa0335870:CDS |
| ATTTCTGTTTCTTTCATCAT+TGG | 0.372100 | 2_4:+55091791 | None:intergenic |
| TGCCCATTTGGAAGCTCAAT+TGG | 0.376410 | 2_4:-55090042 | Msa0335870:CDS |
| TGAATTCATTTAGCAATCTC+TGG | 0.381506 | 2_4:+55089300 | None:intergenic |
| GAGATTGCTAAATGAATTCA+TGG | 0.389775 | 2_4:-55089297 | Msa0335870:CDS |
| AAATGCTTAGCAACAAATAA+AGG | 0.390314 | 2_4:+55092833 | None:intergenic |
| GGTTTCCTTGGACCTCCAAC+AGG | 0.393368 | 2_4:-55089580 | Msa0335870:CDS |
| TGGACAACACCATCCATATA+TGG | 0.393575 | 2_4:-55093611 | Msa0335870:CDS |
| GGTGCAGACACGTGCCCATT+TGG | 0.393989 | 2_4:-55090054 | Msa0335870:CDS |
| CAGATTTAAAAGAACGTTCT+GGG | 0.395818 | 2_4:-55092060 | Msa0335870:CDS |
| CCAGTGGTTGTAACCATGTT+TGG | 0.401887 | 2_4:+55092313 | None:intergenic |
| TGCTTAACTGGACCAGAAAT+CGG | 0.401909 | 2_4:+55092289 | None:intergenic |
| GATTTATAAGTATCTTCTAT+AGG | 0.403874 | 2_4:-55089084 | Msa0335870:three_prime_UTR |
| TGGCTCTTTGGATCCAGTCT+TGG | 0.404004 | 2_4:+55092928 | None:intergenic |
| ATGTGTTCAGAATAGACAAT+AGG | 0.405397 | 2_4:+55092160 | None:intergenic |
| GGGCCACTCTAGCCTTGTTA+AGG | 0.406687 | 2_4:-55093553 | Msa0335870:CDS |
| CATGAGAGGAAGCCTGGTTC+AGG | 0.406784 | 2_4:-55094000 | Msa0335870:CDS |
| GGAGTATACTAAACTAATAT+AGG | 0.407988 | 2_4:-55089106 | Msa0335870:three_prime_UTR |
| TGGGCTGTTGGGTGTGAAGA+TGG | 0.410183 | 2_4:-55091686 | Msa0335870:CDS |
| ATTAGAGTATTTGATAAGAA+AGG | 0.410952 | 2_4:-55091896 | Msa0335870:CDS |
| TCATTTACAGTGTGTTCTCT+TGG | 0.414164 | 2_4:+55091836 | None:intergenic |
| TAGGAGATTCCTACGCAAAT+TGG | 0.414515 | 2_4:+55095211 | None:intergenic |
| GAAATGCTTTCCGGTTGAAC+AGG | 0.416933 | 2_4:+55092208 | None:intergenic |
| TGAACTGTTCTCAATCGGTT+TGG | 0.416937 | 2_4:+55089193 | None:intergenic |
| CTATCTCATATTCAGATAAC+AGG | 0.419081 | 2_4:+55089273 | None:intergenic |
| TTGAACCTCACCACAATTAT+CGG | 0.421093 | 2_4:+55093028 | None:intergenic |
| TAGGCATTGGCGATATTCAT+TGG | 0.421482 | 2_4:+55089995 | None:intergenic |
| TGCAACAAACTTTCCATGCT+TGG | 0.422612 | 2_4:+55094053 | None:intergenic |
| AGAATTATTCCAGAAGTAGT+TGG | 0.426222 | 2_4:-55092235 | Msa0335870:CDS |
| AAGAAGTCAATGAATCTTGA+AGG | 0.428990 | 2_4:+55091091 | None:intergenic |
| AGCCTCCAGATATTGAAAAC+TGG | 0.431982 | 2_4:-55093954 | Msa0335870:CDS |
| AGTTGGAGTGCCTGTTCAAC+CGG | 0.432594 | 2_4:-55092218 | Msa0335870:CDS |
| AGCAACGGTGCTTCCAAGAC+TGG | 0.433887 | 2_4:-55092941 | Msa0335870:CDS |
| GGCCACTCTAGCCTTGTTAA+GGG | 0.434060 | 2_4:-55093552 | Msa0335870:CDS |
| TGCATCAGGGTCTGATGATC+AGG | 0.434394 | 2_4:-55094034 | Msa0335870:CDS |
| AAATATTTGGCTCGGAAGCC+TGG | 0.437218 | 2_4:-55090652 | Msa0335870:CDS |
| ATTAAGTTGCTGAGCTGCAC+TGG | 0.437712 | 2_4:+55092186 | None:intergenic |
| CAATAAATCCCATAAATAAA+GGG | 0.439851 | 2_4:+55091128 | None:intergenic |
| AGAAGCAAGTTACAAGTTGA+TGG | 0.440900 | 2_4:+55088976 | None:intergenic |
| TGAATGTCAAGTGTTGGCTT+AGG | 0.444246 | 2_4:-55090774 | Msa0335870:CDS |
| TCTTGTACAATATCAAATAA+GGG | 0.444998 | 2_4:-55088956 | Msa0335870:three_prime_UTR |
| GAAGTCTGTGAGGGTTTCCT+TGG | 0.445023 | 2_4:-55089592 | Msa0335870:CDS |
| TGACACATGTACACTAAAGA+AGG | 0.445359 | 2_4:+55095271 | None:intergenic |
| CACACTGTAAATGACATTGC+AGG | 0.446386 | 2_4:-55091827 | Msa0335870:CDS |
| GAAAGCGTACATAGGACAAT+AGG | 0.447882 | 2_4:+55089976 | None:intergenic |
| TCTGCAAAGCTATCAAAGTC+TGG | 0.448277 | 2_4:-55090844 | Msa0335870:CDS |
| ATCAAACACTTTGGTCTGAT+AGG | 0.448483 | 2_4:-55091751 | Msa0335870:CDS |
| CTTGCTATGAAAGAGCCAAT+AGG | 0.448630 | 2_4:+55093516 | None:intergenic |
| GCAACCCTGCGGGATCACTT+TGG | 0.449256 | 2_4:-55094099 | Msa0335870:CDS |
| GGGGTTGCGTGGGATCCTAT+TGG | 0.449577 | 2_4:-55093531 | Msa0335870:CDS |
| TTGGTAAAATGAGAGCCATT+TGG | 0.451851 | 2_4:+55089234 | None:intergenic |
| CTAAAGCTTACAAGAACAAA+AGG | 0.454756 | 2_4:+55089511 | None:intergenic |
| GACATAAGAGCTAGTCAATT+GGG | 0.456493 | 2_4:-55092103 | Msa0335870:CDS |
| TATTATTGCCATCGGAAGTC+AGG | 0.456770 | 2_4:-55092894 | Msa0335870:CDS |
| GCCTCAAGTTAACGACGTTA+AGG | 0.457310 | 2_4:-55092362 | Msa0335870:CDS |
| AAGCCAATTGAGCTTCCAAA+TGG | 0.466100 | 2_4:+55090039 | None:intergenic |
| GATGATCCCATCATCATTGT+AGG | 0.472018 | 2_4:+55091210 | None:intergenic |
| TGTAAATGACATTGCAGGGC+TGG | 0.472765 | 2_4:-55091822 | Msa0335870:CDS |
| AATTAATTTAGCAGAAAGTC+CGG | 0.475157 | 2_4:-55092512 | Msa0335870:CDS |
| AACATTGATGCCTCCATCAC+CGG | 0.475229 | 2_4:+55091979 | None:intergenic |
| AAGTTATTTGAATCTGAAGA+TGG | 0.475301 | 2_4:+55089544 | None:intergenic |
| TGACATAAGAGCTAGTCAAT+TGG | 0.475807 | 2_4:-55092104 | Msa0335870:CDS |
| GCTACTGAACTGTTCTCAAT+CGG | 0.475810 | 2_4:+55089188 | None:intergenic |
| TCCTCAGCCATCCCTGTTGG+AGG | 0.476270 | 2_4:+55089568 | None:intergenic |
| AATGCGAATTTCTGGGCTGT+TGG | 0.478045 | 2_4:-55091698 | Msa0335870:CDS |
| CTCAGATTTGCTACTGGTGG+TGG | 0.479758 | 2_4:-55095004 | Msa0335870:CDS |
| ATGCGAATTTCTGGGCTGTT+GGG | 0.481341 | 2_4:-55091697 | Msa0335870:CDS |
| CCTGCACTAACACAAGCCTT+TGG | 0.482671 | 2_4:+55092406 | None:intergenic |
| CCTATGTACGCTTTCTTGCA+AGG | 0.483679 | 2_4:-55089968 | Msa0335870:intron |
| AATTCCGTGGTTCCTGAACC+AGG | 0.483707 | 2_4:+55093988 | None:intergenic |
| AACGTTCTGGGGTTACTGCT+AGG | 0.485333 | 2_4:-55092048 | Msa0335870:CDS |
| CATTTCATTACCACTACTCA+TGG | 0.485672 | 2_4:-55093133 | Msa0335870:CDS |
| GGACGTGCTTCCAAAAGAAC+AGG | 0.485888 | 2_4:+55091857 | None:intergenic |
| GAAATCTCTTGGTGCGGACA+TGG | 0.486344 | 2_4:-55094151 | Msa0335870:CDS |
| GCCACTCTAGCCTTGTTAAG+GGG | 0.487208 | 2_4:-55093551 | Msa0335870:CDS |
| CCGAATCTTTGCAGGGAATG+AGG | 0.487466 | 2_4:-55089379 | Msa0335870:intron |
| TCCACCAGGTTGAACATCAA+TGG | 0.488643 | 2_4:+55095027 | None:intergenic |
| AACGTCGTTAACTTGAGGCT+TGG | 0.489196 | 2_4:+55092366 | None:intergenic |
| CAGATTCAAATAACTTAGCA+TGG | 0.489752 | 2_4:-55089537 | Msa0335870:CDS |
| CCACTCTAGCCTTGTTAAGG+GGG | 0.490260 | 2_4:-55093550 | Msa0335870:CDS |
| CCAAAGGCTTGTGTTAGTGC+AGG | 0.490964 | 2_4:-55092406 | Msa0335870:CDS |
| AGAGTATTTGATAAGAAAGG+AGG | 0.491490 | 2_4:-55091893 | Msa0335870:CDS |
| AGTCTCAGATTTCCCTTCCT+GGG | 0.493440 | 2_4:+55092973 | None:intergenic |
| AGCAGATGAATCTCGATTAA+GGG | 0.493559 | 2_4:-55089614 | Msa0335870:CDS |
| TGATCCAAATCAAGACCAAA+TGG | 0.495342 | 2_4:-55089249 | Msa0335870:CDS |
| ATATGGAATATGAAATCTCT+TGG | 0.496172 | 2_4:-55094162 | Msa0335870:CDS |
| AATCTTGAAGGAGACAAGTT+CGG | 0.496892 | 2_4:+55091103 | None:intergenic |
| CCTTGGACCTCCAACAGGGA+TGG | 0.496981 | 2_4:-55089575 | Msa0335870:CDS |
| ATTGATGCTGGTGACAAGAA+AGG | 0.500753 | 2_4:-55091154 | Msa0335870:CDS |
| GAGCTGGCAAAATTTGATGC+AGG | 0.500810 | 2_4:+55090733 | None:intergenic |
| GAGTTGAAGAGAAGTCGTTA+TGG | 0.500925 | 2_4:-55092553 | Msa0335870:CDS |
| GTCTGTCAATTGTGTTAGGT+GGG | 0.502860 | 2_4:-55094076 | Msa0335870:CDS |
| CTCATTGCCTACAGAACCTC+CGG | 0.504647 | 2_4:+55092336 | None:intergenic |
| AAAGTGTTGTAGATTTATCC+TGG | 0.505238 | 2_4:-55092802 | Msa0335870:intron |
| ATGATTCTTCTTTGGCTAGT+GGG | 0.507720 | 2_4:-55093638 | Msa0335870:CDS |
| CCGATGGCAATAATATTGTA+AGG | 0.507726 | 2_4:+55092902 | None:intergenic |
| TCCATTGATGTTCAACCTGG+TGG | 0.508021 | 2_4:-55095028 | Msa0335870:CDS |
| CCAAACATGGTTACAACCAC+TGG | 0.508512 | 2_4:-55092313 | Msa0335870:CDS |
| AACAGCAGTGCAAATTCCAT+TGG | 0.509139 | 2_4:+55093581 | None:intergenic |
| GAGAAGATTTACACTAAGTG+TGG | 0.509912 | 2_4:-55091246 | Msa0335870:intron |
| AAGGGAAATCTGAGACTGTC+GGG | 0.509959 | 2_4:-55092967 | Msa0335870:CDS |
| CTGCCCCAGTTCTTGAAAGA+GGG | 0.513504 | 2_4:-55093090 | Msa0335870:CDS |
| GGTCTGTCAATTGTGTTAGG+TGG | 0.514996 | 2_4:-55094077 | Msa0335870:CDS |
| TGCAATGCCTACAATGATGA+TGG | 0.515186 | 2_4:-55091217 | Msa0335870:CDS |
| GAGTTTAAATGATGCTGAGC+TGG | 0.516401 | 2_4:-55092578 | Msa0335870:CDS |
| ATTCCCCTCTTTCAAGAACT+GGG | 0.517009 | 2_4:+55093086 | None:intergenic |
| GAATGTCAAGTGTTGGCTTA+GGG | 0.517230 | 2_4:-55090773 | Msa0335870:CDS |
| AAGTTGATGGGATAAATCAT+AGG | 0.517719 | 2_4:+55088989 | None:intergenic |
| GAGTATTTGATAAGAAAGGA+GGG | 0.517773 | 2_4:-55091892 | Msa0335870:CDS |
| GGTTCCTCAGCCATCCCTGT+TGG | 0.518156 | 2_4:+55089565 | None:intergenic |
| TTTCTGTTCGACGCCATCGA+TGG | 0.518720 | 2_4:+55089326 | None:intergenic |
| TTGATGCTGGTGACAAGAAA+GGG | 0.522971 | 2_4:-55091153 | Msa0335870:CDS |
| TTAATACATGAGAGGAAGCC+TGG | 0.526317 | 2_4:-55094006 | Msa0335870:CDS |
| GATGATTCTTCTTTGGCTAG+TGG | 0.527580 | 2_4:-55093639 | Msa0335870:CDS |
| ATGTTCCTTGGATGGATCTG+TGG | 0.530950 | 2_4:-55092635 | Msa0335870:CDS |
| CTTGGCAGAATGACTGATGA+TGG | 0.531305 | 2_4:-55090077 | Msa0335870:intron |
| ATTTGGCTCGGAAGCCTGGT+TGG | 0.531329 | 2_4:-55090648 | Msa0335870:CDS |
| CTCGGAAGCCTGGTTGGACA+AGG | 0.531727 | 2_4:-55090642 | Msa0335870:intron |
| TCTGCCCCAGTTCTTGAAAG+AGG | 0.531947 | 2_4:-55093091 | Msa0335870:CDS |
| TTATAGACTGTGATGAATGC+TGG | 0.532011 | 2_4:-55091179 | Msa0335870:CDS |
| TTCAATTCAAAGTGGTGAGC+TGG | 0.532489 | 2_4:-55090698 | Msa0335870:CDS |
| AAGGCTTCTTGCAACCCTGC+GGG | 0.533101 | 2_4:-55094109 | Msa0335870:CDS |
| AGTACCTTTGAAGTGTGTGT+TGG | 0.533726 | 2_4:+55089034 | None:intergenic |
| AAAGAATTCTTCTAATGCCC+AGG | 0.539984 | 2_4:-55092990 | Msa0335870:CDS |
| TGGTTCCCCGCTTGTTGTGT+TGG | 0.540653 | 2_4:-55090824 | Msa0335870:CDS |
| TCCTTAACGTCGTTAACTTG+AGG | 0.541343 | 2_4:+55092361 | None:intergenic |
| CTTAGCAACAAATAAAGGAC+GGG | 0.541542 | 2_4:+55092838 | None:intergenic |
| GTCGTTATGGCGATGTGAGT+GGG | 0.543035 | 2_4:-55092540 | Msa0335870:CDS |
| CCCTCATGTCTAAGCCAACT+AGG | 0.547293 | 2_4:+55095064 | None:intergenic |
| ACGTTCTGGGGTTACTGCTA+GGG | 0.547430 | 2_4:-55092047 | Msa0335870:CDS |
| AGCCAATTGAGCTTCCAAAT+GGG | 0.548603 | 2_4:+55090040 | None:intergenic |
| TATCAGGCCGTCAGAAATTG+TGG | 0.549425 | 2_4:+55092024 | None:intergenic |
| TGTGTTAGGTGGGCCAAGCA+TGG | 0.549689 | 2_4:-55094066 | Msa0335870:CDS |
| AGGCATCAATGTTCAACAGA+TGG | 0.550641 | 2_4:-55091969 | Msa0335870:CDS |
| GAGAAAGTTCCAGATACATC+CGG | 0.551094 | 2_4:-55091998 | Msa0335870:CDS |
| ATCTTAGAAAATATTTGGCT+CGG | 0.552826 | 2_4:-55090660 | Msa0335870:CDS |
| AATTCTTCTAATGCCCAGGA+AGG | 0.555579 | 2_4:-55092986 | Msa0335870:CDS |
| GGCATCAATGTTCAACAGAT+GGG | 0.556962 | 2_4:-55091968 | Msa0335870:CDS |
| AGAAGATTTACACTAAGTGT+GGG | 0.559562 | 2_4:-55091245 | Msa0335870:intron |
| TAGTCCACACTGTTATTGTC+CGG | 0.562387 | 2_4:+55092870 | None:intergenic |
| GGTGGACTCAGATTTGCTAC+TGG | 0.562938 | 2_4:-55095010 | Msa0335870:CDS |
| GTTGAAGGAACTTAGAACCT+AGG | 0.564021 | 2_4:+55095192 | None:intergenic |
| GCAATAATATTGTAAGGCTG+TGG | 0.564130 | 2_4:+55092908 | None:intergenic |
| GTTCCAGATACATCCGGTGA+TGG | 0.565692 | 2_4:-55091992 | Msa0335870:CDS |
| AGCACCAACACACACTTCAA+AGG | 0.565983 | 2_4:-55089038 | Msa0335870:three_prime_UTR |
| GGAACCACGGAATTTGGCAG+TGG | 0.567462 | 2_4:-55093979 | Msa0335870:CDS |
| GTTGCTGGTGAAGATGACTT+TGG | 0.568129 | 2_4:+55089215 | None:intergenic |
| ACTAGCCAAAGAAGAATCAT+CGG | 0.568194 | 2_4:+55093641 | None:intergenic |
| GACACATGTACACTAAAGAA+GGG | 0.569509 | 2_4:+55095272 | None:intergenic |
| ACCTAGTTGGCTTAGACATG+AGG | 0.569637 | 2_4:-55095065 | Msa0335870:CDS |
| TGTTCCTTGGATGGATCTGT+GGG | 0.570329 | 2_4:-55092634 | Msa0335870:CDS |
| CTCTCCACTGCCAAATTCCG+TGG | 0.571674 | 2_4:+55093975 | None:intergenic |
| TGAACCCAAACTCCAAGAGC+TGG | 0.571680 | 2_4:+55090717 | None:intergenic |
| AATTTGCGTAGGAATCTCCT+AGG | 0.571684 | 2_4:-55095209 | Msa0335870:five_prime_UTR |
| CCATCCCTGTTGGAGGTCCA+AGG | 0.574661 | 2_4:+55089575 | None:intergenic |
| CTCATGGTTTCAAGAAGCCT+AGG | 0.574709 | 2_4:-55093117 | Msa0335870:CDS |
| AGTCGTTATGGCGATGTGAG+TGG | 0.575752 | 2_4:-55092541 | Msa0335870:CDS |
| GAGACTGTCGGGTGGAGCAA+CGG | 0.576961 | 2_4:-55092956 | Msa0335870:CDS |
| GAAGGGAAATCTGAGACTGT+CGG | 0.577131 | 2_4:-55092968 | Msa0335870:CDS |
| CTAGCCAAAGAAGAATCATC+GGG | 0.577375 | 2_4:+55093642 | None:intergenic |
| CATATATGGAATATGACCAA+TGG | 0.577450 | 2_4:-55093597 | Msa0335870:CDS |
| TTGACATGAATGTCAAGTGT+TGG | 0.578333 | 2_4:-55090780 | Msa0335870:CDS |
| AGTATTTGATAAGAAAGGAG+GGG | 0.578692 | 2_4:-55091891 | Msa0335870:CDS |
| GAAGCAAGTTACAAGTTGAT+GGG | 0.579171 | 2_4:+55088977 | None:intergenic |
| TCATTACGACCAATTTGCGT+AGG | 0.579434 | 2_4:-55095220 | Msa0335870:five_prime_UTR |
| GTGTTGCCAACACAACAAGC+GGG | 0.581092 | 2_4:+55090818 | None:intergenic |
| AGAACTGGGGCAGAATGCCT+AGG | 0.581232 | 2_4:+55093100 | None:intergenic |
| AGATTCAAATAACTTAGCAT+GGG | 0.582381 | 2_4:-55089536 | Msa0335870:CDS |
| CCTTACAATATTATTGCCAT+CGG | 0.582998 | 2_4:-55092902 | Msa0335870:CDS |
| ACAGAAATTGTATGCACAAG+GGG | 0.583515 | 2_4:-55091776 | Msa0335870:CDS |
| ATTACACACCTTGTCCAACC+AGG | 0.583716 | 2_4:+55090634 | None:intergenic |
| GAGAGGGCACTCTGCTGATG+TGG | 0.583964 | 2_4:-55093914 | Msa0335870:intron |
| CCTTGCAAGAAAGCGTACAT+AGG | 0.585401 | 2_4:+55089968 | None:intergenic |
| GTTAACGACGTTAAGGAGAC+CGG | 0.587417 | 2_4:-55092355 | Msa0335870:CDS |
| ATGGAAAGTTTGTTGCATCA+GGG | 0.588867 | 2_4:-55094047 | Msa0335870:CDS |
| GGTCATATTCCATATATGGA+TGG | 0.589286 | 2_4:+55093602 | None:intergenic |
| TTGCCATCGGAAGTCAGGAC+CGG | 0.591201 | 2_4:-55092889 | Msa0335870:CDS |
| TGTCCGGTCCTGACTTCCGA+TGG | 0.594096 | 2_4:+55092886 | None:intergenic |
| CGTGTTGCCAACACAACAAG+CGG | 0.595248 | 2_4:+55090817 | None:intergenic |
| AAGGAGACCGGAGGTTCTGT+AGG | 0.596971 | 2_4:-55092343 | Msa0335870:CDS |
| AGCTGGCAAAATTTGATGCA+GGG | 0.597004 | 2_4:+55090734 | None:intergenic |
| GCTTCTAGAAGTAACTGTGC+CGG | 0.597032 | 2_4:+55092493 | None:intergenic |
| TGCCCCAGTTCTTGAAAGAG+GGG | 0.597230 | 2_4:-55093089 | Msa0335870:CDS |
| TTGGCAGAATGACTGATGAT+GGG | 0.597498 | 2_4:-55090076 | Msa0335870:intron |
| TCATGTCAAATAGGAAAGCA+TGG | 0.597967 | 2_4:+55090794 | None:intergenic |
| CCAGATACATCCGGTGATGG+AGG | 0.598893 | 2_4:-55091989 | Msa0335870:CDS |
| CAAAGGCTTGTGTTAGTGCA+GGG | 0.599021 | 2_4:-55092405 | Msa0335870:CDS |
| CAGTTCTTGAAAGAGGGGAA+TGG | 0.599914 | 2_4:-55093084 | Msa0335870:CDS |
| GGAAGATATTCTTCCATCGA+TGG | 0.600304 | 2_4:-55089339 | Msa0335870:CDS |
| ACACTGTAAATGACATTGCA+GGG | 0.601236 | 2_4:-55091826 | Msa0335870:CDS |
| GTAGCAAATCTGAGTCCACC+AGG | 0.602920 | 2_4:+55095013 | None:intergenic |
| CGATTAAGGGAAGTCTGTGA+GGG | 0.604692 | 2_4:-55089601 | Msa0335870:CDS |
| GGACTCAGATTTGCTACTGG+TGG | 0.610564 | 2_4:-55095007 | Msa0335870:CDS |
| TTCATCACAGTCTATAAATG+TGG | 0.610687 | 2_4:+55091185 | None:intergenic |
| AAAGAGTATAGACGCCCTGA+TGG | 0.611152 | 2_4:-55092265 | Msa0335870:CDS |
| GTACATAGGACAATAGGCAT+TGG | 0.611246 | 2_4:+55089982 | None:intergenic |
| CAGACCCAAAGTGATCCCGC+AGG | 0.614670 | 2_4:+55094094 | None:intergenic |
| AAACAGAAATTGTATGCACA+AGG | 0.615864 | 2_4:-55091778 | Msa0335870:CDS |
| ACCTCCAACAGGGATGGCTG+AGG | 0.617062 | 2_4:-55089569 | Msa0335870:CDS |
| GTGTGAAGATGGATGTCTGC+AGG | 0.617995 | 2_4:-55091675 | Msa0335870:intron |
| GCTTAGCAACAAATAAAGGA+CGG | 0.619458 | 2_4:+55092837 | None:intergenic |
| AGCTTCTACCAAACAAACAT+CGG | 0.622657 | 2_4:-55092470 | Msa0335870:CDS |
| TGAATGCTGGACATTGATGC+TGG | 0.625601 | 2_4:-55091166 | Msa0335870:CDS |
| CTTCTTGAAACCATGAGTAG+TGG | 0.628214 | 2_4:+55093123 | None:intergenic |
| ATTCTTCTAATGCCCAGGAA+GGG | 0.629115 | 2_4:-55092985 | Msa0335870:CDS |
| TACTGGTGGTGGTGACCACA+AGG | 0.629423 | 2_4:-55094993 | Msa0335870:intron |
| ACACAATGCTCCGATAATTG+TGG | 0.632313 | 2_4:-55093038 | Msa0335870:CDS |
| CCTAGTTGGCTTAGACATGA+GGG | 0.632379 | 2_4:-55095064 | Msa0335870:CDS |
| AAAGGCTTCTTGCAACCCTG+CGG | 0.632568 | 2_4:-55094110 | Msa0335870:CDS |
| TCGATTAAGGGAAGTCTGTG+AGG | 0.635325 | 2_4:-55089602 | Msa0335870:CDS |
| AAAGTCTCGACACTTCTCAA+AGG | 0.635338 | 2_4:-55094128 | Msa0335870:CDS |
| ATTGGCAGATCCCAAAGCCA+AGG | 0.635785 | 2_4:+55090013 | None:intergenic |
| AGATTTAAAAGAACGTTCTG+GGG | 0.636158 | 2_4:-55092059 | Msa0335870:CDS |
| TGTAGGCAATGAGCCAAACA+TGG | 0.636189 | 2_4:-55092326 | Msa0335870:CDS |
| CAGTTCAGTAGCAATCGACA+AGG | 0.636525 | 2_4:-55089177 | Msa0335870:CDS |
| GAGGAAACACAAGCTTCTCA+GGG | 0.640369 | 2_4:-55089360 | Msa0335870:CDS |
| TTCCCCTCTTTCAAGAACTG+GGG | 0.642026 | 2_4:+55093087 | None:intergenic |
| GCAATGCCTACAATGATGAT+GGG | 0.643118 | 2_4:-55091216 | Msa0335870:CDS |
| AACAGAAATTGTATGCACAA+GGG | 0.644066 | 2_4:-55091777 | Msa0335870:CDS |
| ACAAAAGAAGACAACGCCAA+AGG | 0.644606 | 2_4:-55092422 | Msa0335870:CDS |
| CAGAAATTGTATGCACAAGG+GGG | 0.645381 | 2_4:-55091775 | Msa0335870:CDS |
| CGGTGCTCAAGCAAAGACAT+TGG | 0.646083 | 2_4:-55089150 | Msa0335870:CDS |
| GAATATGAAATCTCTTGGTG+CGG | 0.646641 | 2_4:-55094157 | Msa0335870:CDS |
| AGGCGATATTAATACATGAG+AGG | 0.650057 | 2_4:-55094014 | Msa0335870:CDS |
| TTTGATAAGAAAGGAGGGGA+CGG | 0.651367 | 2_4:-55091887 | Msa0335870:CDS |
| GTTTCCTTGGACCTCCAACA+GGG | 0.657582 | 2_4:-55089579 | Msa0335870:CDS |
| GTAGCAATCGACAAGGAGGA+CGG | 0.662633 | 2_4:-55089170 | Msa0335870:CDS |
| AGACCCAAAGTGATCCCGCA+GGG | 0.665396 | 2_4:+55094095 | None:intergenic |
| TGCACCCACAGATCCATCCA+AGG | 0.667245 | 2_4:+55092630 | None:intergenic |
| GAAGCCTGGTTCAGGAACCA+CGG | 0.674830 | 2_4:-55093992 | Msa0335870:CDS |
| ATGCTCCGATAATTGTGGTG+AGG | 0.677092 | 2_4:-55093033 | Msa0335870:CDS |
| TTCAGTAGCAATCGACAAGG+AGG | 0.683915 | 2_4:-55089174 | Msa0335870:CDS |
| AGTTTGGGTTCAATTCAAAG+TGG | 0.685790 | 2_4:-55090706 | Msa0335870:CDS |
| AGAAATTGTATGCACAAGGG+GGG | 0.686580 | 2_4:-55091774 | Msa0335870:CDS |
| TGGACCAGAAATCGGACCAG+TGG | 0.688705 | 2_4:+55092297 | None:intergenic |
| TTAGCAACAAATAAAGGACG+GGG | 0.689587 | 2_4:+55092839 | None:intergenic |
| TGGCAGAATGACTGATGATG+GGG | 0.692108 | 2_4:-55090075 | Msa0335870:intron |
| ATAAGAGCTAGTCAATTGGG+AGG | 0.693599 | 2_4:-55092100 | Msa0335870:CDS |
| GCTAGGGCCACAATTTCTGA+CGG | 0.693737 | 2_4:-55092031 | Msa0335870:CDS |
| TGTTGCCAACACAACAAGCG+GGG | 0.693814 | 2_4:+55090819 | None:intergenic |
| GGAAATCTGAGACTGTCGGG+TGG | 0.693970 | 2_4:-55092964 | Msa0335870:CDS |
| AAAGTTGTGATGACTCTGAG+AGG | 0.694526 | 2_4:-55093931 | Msa0335870:CDS |
| CGGCTTGGATGGTCTCCATG+TGG | 0.696812 | 2_4:-55093157 | Msa0335870:CDS |
| GTGGTAATGAAATGACCACA+TGG | 0.706100 | 2_4:+55093142 | None:intergenic |
| AAGTTGTGATGACTCTGAGA+GGG | 0.706584 | 2_4:-55093930 | Msa0335870:CDS |
| AACGACGTTAAGGAGACCGG+AGG | 0.710315 | 2_4:-55092352 | Msa0335870:CDS |
| AGGACCGGACAATAACAGTG+TGG | 0.768026 | 2_4:-55092874 | Msa0335870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAATAATAA+TGG | + | chr2_4:55090473-55090492 | None:intergenic | 0.0% |
| !!! | TTCAATTATTTTAATTAACT+TGG | - | chr2_4:55090538-55090557 | Msa0335870:intron | 10.0% |
| !!! | TCAATTATTTTAATTAACTT+GGG | - | chr2_4:55090539-55090558 | Msa0335870:intron | 10.0% |
| !!! | AATTTTAAATAAGTATTGAA+GGG | + | chr2_4:55092795-55092814 | None:intergenic | 10.0% |
| !!! | AAATTTTAAATAAGTATTGA+AGG | + | chr2_4:55092796-55092815 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGAG+AGG | - | chr2_4:55093819-55093838 | Msa0335870:intron | 10.0% |
| !!! | TCTGAATTTATTTGAATTTT+TGG | - | chr2_4:55089289-55089308 | Msa0335870:CDS | 15.0% |
| !! | AAAACAATAAATAAAACAAG+AGG | + | chr2_4:55090385-55090404 | None:intergenic | 15.0% |
| !! | AAAAAAAGGAAACATTAATT+AGG | + | chr2_4:55091046-55091065 | None:intergenic | 15.0% |
| !! | TCAAAAGAAGAAAAATAAAA+AGG | + | chr2_4:55091560-55091579 | None:intergenic | 15.0% |
| !! | AACAGAAAATTTAGTATAAA+GGG | + | chr2_4:55092726-55092745 | None:intergenic | 15.0% |
| !! | TAAAAATTCTAATCAAAAGA+TGG | + | chr2_4:55094118-55094137 | None:intergenic | 15.0% |
| !!! | ATTAGAATTTTTATGTTAGA+AGG | - | chr2_4:55094125-55094144 | Msa0335870:CDS | 15.0% |
| !!! | TTAGAATTTTTATGTTAGAA+GGG | - | chr2_4:55094126-55094145 | Msa0335870:CDS | 15.0% |
| !! | CTTATTAAATATGAATATCT+TGG | - | chr2_4:55094152-55094171 | Msa0335870:CDS | 15.0% |
| !! | TTCATTTATATATTTACTGA+AGG | - | chr2_4:55094318-55094337 | Msa0335870:intron | 15.0% |
| !! | TTAAATTAGATAACATAGTA+AGG | + | chr2_4:55094531-55094550 | None:intergenic | 15.0% |
| !! | ATTCAATAAAATTCAGATTC+TGG | - | chr2_4:55089000-55089019 | Msa0335870:three_prime_UTR | 20.0% |
| !! | TTCAATAAAATTCAGATTCT+GGG | - | chr2_4:55089001-55089020 | Msa0335870:three_prime_UTR | 20.0% |
| !! | AAAAAAAAAGGTTGAAATTG+GGG | + | chr2_4:55089084-55089103 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAGGTTGAAATT+GGG | + | chr2_4:55089085-55089104 | None:intergenic | 20.0% |
| !! | TGAAAAAAAAAGGTTGAAAT+TGG | + | chr2_4:55089086-55089105 | None:intergenic | 20.0% |
| !! | TCTTCAACTATGAAAAAAAA+AGG | + | chr2_4:55089096-55089115 | None:intergenic | 20.0% |
| !! | TTATATACAAATACACAATG+TGG | - | chr2_4:55089621-55089640 | Msa0335870:intron | 20.0% |
| !! | ATAAAGGCTAAAAACTATAT+TGG | + | chr2_4:55089919-55089938 | None:intergenic | 20.0% |
| !! | TTGTACTAAATAGTGTATTA+TGG | - | chr2_4:55089950-55089969 | Msa0335870:intron | 20.0% |
| !! | ATGATAAAACTGTGATTATT+TGG | - | chr2_4:55090762-55090781 | Msa0335870:CDS | 20.0% |
| !!! | AATTCTTTTTGAACAGAAAA+TGG | + | chr2_4:55091245-55091264 | None:intergenic | 20.0% |
| !!! | TATTTTTCTTCTTTTGAAAC+AGG | - | chr2_4:55091563-55091582 | Msa0335870:intron | 20.0% |
| !!! | ATTAGAGTATTTGATAAGAA+AGG | - | chr2_4:55092351-55092370 | Msa0335870:CDS | 20.0% |
| !! | CAACAGAAAATTTAGTATAA+AGG | + | chr2_4:55092727-55092746 | None:intergenic | 20.0% |
| !! | CAATAAATCCCATAAATAAA+GGG | + | chr2_4:55093122-55093141 | None:intergenic | 20.0% |
| !! | TCAATAAATCCCATAAATAA+AGG | + | chr2_4:55093123-55093142 | None:intergenic | 20.0% |
| !! | AAACAACTGAATGTAATATA+TGG | + | chr2_4:55093224-55093243 | None:intergenic | 20.0% |
| !! | GTTGATATTCCATATTTAAT+TGG | - | chr2_4:55093667-55093686 | Msa0335870:intron | 20.0% |
| !! | AAATTGACCCATAAAAATAT+TGG | + | chr2_4:55093779-55093798 | None:intergenic | 20.0% |
| !! | TTAAAAAAAATGTGTGAAGT+TGG | + | chr2_4:55094764-55094783 | None:intergenic | 20.0% |
| !! | ATTAAAAATATTCAGAGTGT+AGG | - | chr2_4:55095120-55095139 | Msa0335870:five_prime_UTR | 20.0% |
| !! | GATTTATAAGTATCTTCTAT+AGG | - | chr2_4:55095163-55095182 | Msa0335870:five_prime_UTR | 20.0% |
| !! | TTCTTGTACAATATCAAATA+AGG | - | chr2_4:55095290-55095309 | Msa0335870:five_prime_UTR | 20.0% |
| !! | TCTTGTACAATATCAAATAA+GGG | - | chr2_4:55095291-55095310 | Msa0335870:five_prime_UTR | 20.0% |
| !! | TTATCAATTTTCTTGAAAGG+TGG | + | chr2_4:55088954-55088973 | None:intergenic | 25.0% |
| !! | GGTTTATCAATTTTCTTGAA+AGG | + | chr2_4:55088957-55088976 | None:intergenic | 25.0% |
| ! | AAAAAAAAGGTTGAAATTGG+GGG | + | chr2_4:55089083-55089102 | None:intergenic | 25.0% |
| ! | AGAAAAAAATTGATACCTTG+TGG | + | chr2_4:55089272-55089291 | None:intergenic | 25.0% |
| !!! | TGATTAAACATTGATTTGCA+GGG | - | chr2_4:55089365-55089384 | Msa0335870:CDS | 25.0% |
| ! | AGTCAAAAGATTACATGATA+TGG | - | chr2_4:55089544-55089563 | Msa0335870:CDS | 25.0% |
| !!! | TGATTTGTTTTCAAAGAACT+TGG | - | chr2_4:55089814-55089833 | Msa0335870:intron | 25.0% |
| !!! | CTACTATTTTTCATGATATG+CGG | + | chr2_4:55089854-55089873 | None:intergenic | 25.0% |
| !!! | TATAGTTTTTAGCCTTTATC+CGG | - | chr2_4:55089920-55089939 | Msa0335870:intron | 25.0% |
| ! | TATTTAGTACAAATTGTTGC+CGG | + | chr2_4:55089942-55089961 | None:intergenic | 25.0% |
| ! | ATATGGAATATGAAATCTCT+TGG | - | chr2_4:55090085-55090104 | Msa0335870:intron | 25.0% |
| ! | ATAAAACAAGAGGTTGAAAA+AGG | + | chr2_4:55090375-55090394 | None:intergenic | 25.0% |
| !!! | TCAGTAAGTTCTTACTTTTA+AGG | - | chr2_4:55090836-55090855 | Msa0335870:CDS | 25.0% |
| ! | AAATGCTTAGCAACAAATAA+AGG | + | chr2_4:55091417-55091436 | None:intergenic | 25.0% |
| ! | AATTAATTTAGCAGAAAGTC+CGG | - | chr2_4:55091735-55091754 | Msa0335870:CDS | 25.0% |
| !!! | CTTCTGGAATAATTCTTTTA+CGG | + | chr2_4:55092008-55092027 | None:intergenic | 25.0% |
| !! | ATTTCTGTTTCTTTCATCAT+TGG | + | chr2_4:55092459-55092478 | None:intergenic | 25.0% |
| ! | ACATTTATTGTATGCATACA+TGG | - | chr2_4:55092609-55092628 | Msa0335870:CDS | 25.0% |
| ! | AATCCAACATTATTCGAATT+AGG | + | chr2_4:55092833-55092852 | None:intergenic | 25.0% |
| !!! | GTTAATTTGTATAGAATGTG+TGG | - | chr2_4:55092874-55092893 | Msa0335870:CDS | 25.0% |
| !!! | TACATGGTTCTAACTTTTTA+AGG | - | chr2_4:55092897-55092916 | Msa0335870:CDS | 25.0% |
| ! | TTAGTGTAAATCTTCTCAAA+AGG | + | chr2_4:55092998-55093017 | None:intergenic | 25.0% |
| ! | CAAAATTGTTGAGAAAATCA+AGG | + | chr2_4:55093319-55093338 | None:intergenic | 25.0% |
| !!! | CTCAACAATTTTGATTTCAT+TGG | - | chr2_4:55093326-55093345 | Msa0335870:intron | 25.0% |
| ! | GGTTGATCTTAGAAAATATT+TGG | - | chr2_4:55093582-55093601 | Msa0335870:CDS | 25.0% |
| ! | ATCTTAGAAAATATTTGGCT+CGG | - | chr2_4:55093587-55093606 | Msa0335870:CDS | 25.0% |
| ! | AAATATGGAATATCAACTAC+AGG | + | chr2_4:55093664-55093683 | None:intergenic | 25.0% |
| ! | CACTAAAGTCCAATTAAATA+TGG | + | chr2_4:55093679-55093698 | None:intergenic | 25.0% |
| !!! | TTTGTCATTTTCGCTTTAAT+AGG | - | chr2_4:55093740-55093759 | Msa0335870:intron | 25.0% |
| !!! | TGCTACTCCAATATTTTTAT+GGG | - | chr2_4:55093769-55093788 | Msa0335870:intron | 25.0% |
| ! | TCTATTCTGTTCTCATAAAA+TGG | - | chr2_4:55093866-55093885 | Msa0335870:intron | 25.0% |
| ! | GAAAATAAATACAGAACATG+AGG | + | chr2_4:55094089-55094108 | None:intergenic | 25.0% |
| ! | AAATTCTAATCAAAAGATGG+TGG | + | chr2_4:55094115-55094134 | None:intergenic | 25.0% |
| !! | GTTTTCTACATAAATTGTAG+TGG | - | chr2_4:55094384-55094403 | Msa0335870:intron | 25.0% |
| ! | AATGATTATGAAATGATTGC+AGG | - | chr2_4:55094608-55094627 | Msa0335870:intron | 25.0% |
| ! | ATGATTATGAAATGATTGCA+GGG | - | chr2_4:55094609-55094628 | Msa0335870:intron | 25.0% |
| ! | AAGTTATTTGAATCTGAAGA+TGG | + | chr2_4:55094706-55094725 | None:intergenic | 25.0% |
| ! | AGATTCAAATAACTTAGCAT+GGG | - | chr2_4:55094711-55094730 | Msa0335870:intron | 25.0% |
| ! | GGAGTATACTAAACTAATAT+AGG | - | chr2_4:55095141-55095160 | Msa0335870:five_prime_UTR | 25.0% |
| !! | GTGATTAAACATTGATTTGC+AGG | - | chr2_4:55089364-55089383 | Msa0335870:CDS | 30.0% |
| CAAGTTTACATGATGTATTC+TGG | - | chr2_4:55089484-55089503 | Msa0335870:intron | 30.0% | |
| ATATGGCAATTGTGATTGAT+TGG | - | chr2_4:55089561-55089580 | Msa0335870:CDS | 30.0% | |
| ! | TAATGGTTTTCCAATGTGTA+TGG | - | chr2_4:55089723-55089742 | Msa0335870:intron | 30.0% |
| !! | AGATCTTCAGTTTAGGATTT+TGG | - | chr2_4:55089759-55089778 | Msa0335870:intron | 30.0% |
| AAAACTATATTGGCGCTATA+TGG | + | chr2_4:55089909-55089928 | None:intergenic | 30.0% | |
| ! | TGTAGTGGAATTTGAACAAA+TGG | + | chr2_4:55089984-55090003 | None:intergenic | 30.0% |
| ! | GTTATTTGACAATACTGACT+TGG | - | chr2_4:55090014-55090033 | Msa0335870:CDS | 30.0% |
| ! | ACTTTCCAGTTTTCAATATC+TGG | + | chr2_4:55090301-55090320 | None:intergenic | 30.0% |
| ATTCCAAAGAAAGAAAAAGC+CGG | + | chr2_4:55090442-55090461 | None:intergenic | 30.0% | |
| TAAAGTAGGTCGATCTTAAT+TGG | - | chr2_4:55090579-55090598 | Msa0335870:intron | 30.0% | |
| CATTGGTCATATTCCATATA+TGG | + | chr2_4:55090652-55090671 | None:intergenic | 30.0% | |
| CATATATGGAATATGACCAA+TGG | - | chr2_4:55090650-55090669 | Msa0335870:CDS | 30.0% | |
| !!! | AATTTGCACTGCTGTTTTAA+GGG | - | chr2_4:55090673-55090692 | Msa0335870:CDS | 30.0% |
| ATACAATGACGAGATGTAAT+TGG | + | chr2_4:55090909-55090928 | None:intergenic | 30.0% | |
| TCTCACTACATAGATAATTG+AGG | + | chr2_4:55090962-55090981 | None:intergenic | 30.0% | |
| !!! | ATGTTTCCTTTTTTTCAGCT+TGG | - | chr2_4:55091051-55091070 | Msa0335870:intron | 30.0% |
| ! | TCTGCAACATTTGATTTCTT+AGG | - | chr2_4:55091186-55091205 | Msa0335870:CDS | 30.0% |
| CCTTACAATATTATTGCCAT+CGG | - | chr2_4:55091345-55091364 | Msa0335870:intron | 30.0% | |
| !! | AAAGTGTTGTAGATTTATCC+TGG | - | chr2_4:55091445-55091464 | Msa0335870:intron | 30.0% |
| ATGCAACAACTAGAGATAAA+GGG | + | chr2_4:55091476-55091495 | None:intergenic | 30.0% | |
| AATGCAACAACTAGAGATAA+AGG | + | chr2_4:55091477-55091496 | None:intergenic | 30.0% | |
| TGCAAAAAGTGAATATCCAT+CGG | + | chr2_4:55091593-55091612 | None:intergenic | 30.0% | |
| ! | CTATACTCTTTTTGCTTAAC+TGG | + | chr2_4:55091973-55091992 | None:intergenic | 30.0% |
| AGAATTATTCCAGAAGTAGT+TGG | - | chr2_4:55092012-55092031 | Msa0335870:CDS | 30.0% | |
| ATGTGTTCAGAATAGACAAT+AGG | + | chr2_4:55092090-55092109 | None:intergenic | 30.0% | |
| TCAGATTTAAAAGAACGTTC+TGG | - | chr2_4:55092186-55092205 | Msa0335870:CDS | 30.0% | |
| CAGATTTAAAAGAACGTTCT+GGG | - | chr2_4:55092187-55092206 | Msa0335870:CDS | 30.0% | |
| AGATTTAAAAGAACGTTCTG+GGG | - | chr2_4:55092188-55092207 | Msa0335870:CDS | 30.0% | |
| ! | AGAGTATTTGATAAGAAAGG+AGG | - | chr2_4:55092354-55092373 | Msa0335870:CDS | 30.0% |
| GAGTATTTGATAAGAAAGGA+GGG | - | chr2_4:55092355-55092374 | Msa0335870:CDS | 30.0% | |
| AGTATTTGATAAGAAAGGAG+GGG | - | chr2_4:55092356-55092375 | Msa0335870:CDS | 30.0% | |
| AAACAGAAATTGTATGCACA+AGG | - | chr2_4:55092469-55092488 | Msa0335870:CDS | 30.0% | |
| AACAGAAATTGTATGCACAA+GGG | - | chr2_4:55092470-55092489 | Msa0335870:CDS | 30.0% | |
| CAACATTCCTGATATAAAGT+AGG | - | chr2_4:55092658-55092677 | Msa0335870:CDS | 30.0% | |
| TTAAATAGTGTGGAAAGTCT+TGG | + | chr2_4:55092758-55092777 | None:intergenic | 30.0% | |
| CTTTCCACACTATTTAATGT+TGG | - | chr2_4:55092761-55092780 | Msa0335870:intron | 30.0% | |
| TAAGCCAACATTAAATAGTG+TGG | + | chr2_4:55092768-55092787 | None:intergenic | 30.0% | |
| TGTCCTAATTCGAATAATGT+TGG | - | chr2_4:55092827-55092846 | Msa0335870:CDS | 30.0% | |
| TCGAATAATGTTGGATTATG+TGG | - | chr2_4:55092836-55092855 | Msa0335870:CDS | 30.0% | |
| AAACTATGGGTACAGTATAT+GGG | - | chr2_4:55092925-55092944 | Msa0335870:CDS | 30.0% | |
| AGAAGATTTACACTAAGTGT+GGG | - | chr2_4:55093002-55093021 | Msa0335870:CDS | 30.0% | |
| TTCATCACAGTCTATAAATG+TGG | + | chr2_4:55093065-55093084 | None:intergenic | 30.0% | |
| ! | AAAGGGATCCCTTTATTTAT+GGG | - | chr2_4:55093111-55093130 | Msa0335870:CDS | 30.0% |
| AAGAAGTCAATGAATCTTGA+AGG | + | chr2_4:55093159-55093178 | None:intergenic | 30.0% | |
| !!! | TACCTTCATTTTTAGTGGAT+GGG | + | chr2_4:55093201-55093220 | None:intergenic | 30.0% |
| !! | TATGGTACCTTCATTTTTAG+TGG | + | chr2_4:55093206-55093225 | None:intergenic | 30.0% |
| CATTCAGTTGTTTGATATTG+CGG | - | chr2_4:55093231-55093250 | Msa0335870:intron | 30.0% | |
| !! | ATACTTGGTTTTTGACTAAG+TGG | - | chr2_4:55093254-55093273 | Msa0335870:intron | 30.0% |
| AAATTTGACCATATCTTTGC+AGG | - | chr2_4:55093364-55093383 | Msa0335870:intron | 30.0% | |
| TAATAGTTCCTGCAAAGATA+TGG | + | chr2_4:55093375-55093394 | None:intergenic | 30.0% | |
| ACTTGACATTCATGTCAAAT+AGG | + | chr2_4:55093465-55093484 | None:intergenic | 30.0% | |
| TGTTTGGTCATAAGAGAAAA+AGG | + | chr2_4:55093708-55093727 | None:intergenic | 30.0% | |
| CAAACTCAACTAAGAATGTT+TGG | + | chr2_4:55093724-55093743 | None:intergenic | 30.0% | |
| !! | GTGCTACTCCAATATTTTTA+TGG | - | chr2_4:55093768-55093787 | Msa0335870:intron | 30.0% |
| ! | TTATGGGTCAATTTGTTTCT+AGG | - | chr2_4:55093785-55093804 | Msa0335870:intron | 30.0% |
| !!! | TTTTTTTTGAGAGGACTTCT+AGG | - | chr2_4:55093828-55093847 | Msa0335870:intron | 30.0% |
| TATCTACAACAGAATGTGAT+AGG | - | chr2_4:55093918-55093937 | Msa0335870:CDS | 30.0% | |
| TTAAAGGAGTTAAAGGATCA+GGG | + | chr2_4:55093997-55094016 | None:intergenic | 30.0% | |
| ATAAGGGTTAAAGGAGTTAA+AGG | + | chr2_4:55094004-55094023 | None:intergenic | 30.0% | |
| !! | AGCTAAACTGGTTTGAATAA+GGG | + | chr2_4:55094020-55094039 | None:intergenic | 30.0% |
| !! | TAGCTAAACTGGTTTGAATA+AGG | + | chr2_4:55094021-55094040 | None:intergenic | 30.0% |
| ! | AGACAACAAGCATATTTTGT+GGG | + | chr2_4:55094053-55094072 | None:intergenic | 30.0% |
| ! | TAGACAACAAGCATATTTTG+TGG | + | chr2_4:55094054-55094073 | None:intergenic | 30.0% |
| CAGATTCAAATAACTTAGCA+TGG | - | chr2_4:55094710-55094729 | Msa0335870:intron | 30.0% | |
| CTAAAGCTTACAAGAACAAA+AGG | + | chr2_4:55094739-55094758 | None:intergenic | 30.0% | |
| TGAATTCATTTAGCAATCTC+TGG | + | chr2_4:55094950-55094969 | None:intergenic | 30.0% | |
| GAGATTGCTAAATGAATTCA+TGG | - | chr2_4:55094950-55094969 | Msa0335870:intron | 30.0% | |
| CTATCTCATATTCAGATAAC+AGG | + | chr2_4:55094977-55094996 | None:intergenic | 30.0% | |
| !! | AAGTTGATGGGATAAATCAT+AGG | + | chr2_4:55095261-55095280 | None:intergenic | 30.0% |
| GACACATGTACACTAAAGAA+GGG | + | chr2_4:55088978-55088997 | None:intergenic | 35.0% | |
| TGACACATGTACACTAAAGA+AGG | + | chr2_4:55088979-55088998 | None:intergenic | 35.0% | |
| TGATTGCTGAAAAACCTAGT+TGG | - | chr2_4:55089169-55089188 | Msa0335870:CDS | 35.0% | |
| ! | TTTTCCATTGATGTTCAACC+TGG | - | chr2_4:55089216-55089235 | Msa0335870:CDS | 35.0% |
| CAACAAACCATACACAAAGT+TGG | + | chr2_4:55089653-55089672 | None:intergenic | 35.0% | |
| ! | AGCAAAGGTACAAACACATA+AGG | + | chr2_4:55089704-55089723 | None:intergenic | 35.0% |
| TGTGTTTGTACCTTTGCTAA+TGG | - | chr2_4:55089706-55089725 | Msa0335870:intron | 35.0% | |
| CATTGGAAAACCATTAGCAA+AGG | + | chr2_4:55089719-55089738 | None:intergenic | 35.0% | |
| ! | GTCAATTTTGCCATACACAT+TGG | + | chr2_4:55089736-55089755 | None:intergenic | 35.0% |
| TGACTTCAGATCTTCAGTTT+AGG | - | chr2_4:55089752-55089771 | Msa0335870:intron | 35.0% | |
| !! | TCAGTTTAGGATTTTGGATC+AGG | - | chr2_4:55089765-55089784 | Msa0335870:intron | 35.0% |
| TACAAATTGTTGCCGGATAA+AGG | + | chr2_4:55089935-55089954 | None:intergenic | 35.0% | |
| ATAACAGCACTATAGTGTAG+TGG | + | chr2_4:55089999-55090018 | None:intergenic | 35.0% | |
| AGATGAGAATGTGATTACGT+GGG | + | chr2_4:55090047-55090066 | None:intergenic | 35.0% | |
| !!! | ATTCTCATCTCTGTTTTTGC+AGG | - | chr2_4:55090057-55090076 | Msa0335870:CDS | 35.0% |
| GAATATGAAATCTCTTGGTG+CGG | - | chr2_4:55090090-55090109 | Msa0335870:intron | 35.0% | |
| !! | ATGGAAAGTTTGTTGCATCA+GGG | - | chr2_4:55090200-55090219 | Msa0335870:intron | 35.0% |
| AGGCGATATTAATACATGAG+AGG | - | chr2_4:55090233-55090252 | Msa0335870:intron | 35.0% | |
| ! | TTCCAGTTTTCAATATCTGG+AGG | + | chr2_4:55090298-55090317 | None:intergenic | 35.0% |
| CGACCAATTAATTTCAATGC+CGG | - | chr2_4:55090420-55090439 | Msa0335870:intron | 35.0% | |
| ! | AAGCCGGCATTGAAATTAAT+TGG | + | chr2_4:55090426-55090445 | None:intergenic | 35.0% |
| TATTTGTCCATGCGTAAAGT+AGG | - | chr2_4:55090565-55090584 | Msa0335870:intron | 35.0% | |
| ACTAGCCAAAGAAGAATCAT+CGG | + | chr2_4:55090609-55090628 | None:intergenic | 35.0% | |
| ATGATTCTTCTTTGGCTAGT+GGG | - | chr2_4:55090609-55090628 | Msa0335870:intron | 35.0% | |
| GGTCATATTCCATATATGGA+TGG | + | chr2_4:55090648-55090667 | None:intergenic | 35.0% | |
| !!! | GAATTTGCACTGCTGTTTTA+AGG | - | chr2_4:55090672-55090691 | Msa0335870:CDS | 35.0% |
| !!! | ATTTGCACTGCTGTTTTAAG+GGG | - | chr2_4:55090674-55090693 | Msa0335870:CDS | 35.0% |
| TTATTTGGCGAACTAGTGAT+TGG | - | chr2_4:55090777-55090796 | Msa0335870:CDS | 35.0% | |
| GATAATTGAGGAGATATCTC+AGG | + | chr2_4:55090950-55090969 | None:intergenic | 35.0% | |
| TAGTGAGATGTGAATGTGAT+TGG | - | chr2_4:55090974-55090993 | Msa0335870:intron | 35.0% | |
| GTTGATCCAAGCTGAAAAAA+AGG | + | chr2_4:55091060-55091079 | None:intergenic | 35.0% | |
| CATTTCATTACCACTACTCA+TGG | - | chr2_4:55091114-55091133 | Msa0335870:CDS | 35.0% | |
| TTGAACCTCACCACAATTAT+CGG | + | chr2_4:55091222-55091241 | None:intergenic | 35.0% | |
| AAAGAATTCTTCTAATGCCC+AGG | - | chr2_4:55091257-55091276 | Msa0335870:intron | 35.0% | |
| GCAATAATATTGTAAGGCTG+TGG | + | chr2_4:55091342-55091361 | None:intergenic | 35.0% | |
| CCGATGGCAATAATATTGTA+AGG | + | chr2_4:55091348-55091367 | None:intergenic | 35.0% | |
| TTAGCAACAAATAAAGGACG+GGG | + | chr2_4:55091411-55091430 | None:intergenic | 35.0% | |
| CTTAGCAACAAATAAAGGAC+GGG | + | chr2_4:55091412-55091431 | None:intergenic | 35.0% | |
| GCTTAGCAACAAATAAAGGA+CGG | + | chr2_4:55091413-55091432 | None:intergenic | 35.0% | |
| TAGAGATAAAGGGAAATACC+AGG | + | chr2_4:55091466-55091485 | None:intergenic | 35.0% | |
| CAAAAAGTGAATATCCATCG+GGG | + | chr2_4:55091591-55091610 | None:intergenic | 35.0% | |
| GCAAAAAGTGAATATCCATC+GGG | + | chr2_4:55091592-55091611 | None:intergenic | 35.0% | |
| !!! | TTCACTTTTTGCATGTTCCT+TGG | - | chr2_4:55091600-55091619 | Msa0335870:intron | 35.0% |
| !!! | CATTTTGAGGCAAAAGAACT+TGG | - | chr2_4:55091643-55091662 | Msa0335870:intron | 35.0% |
| AGCTTCTACCAAACAAACAT+CGG | - | chr2_4:55091777-55091796 | Msa0335870:CDS | 35.0% | |
| ! | TAATTCTTTTACGGCCATCA+GGG | + | chr2_4:55091999-55092018 | None:intergenic | 35.0% |
| ! | ATAATTCTTTTACGGCCATC+AGG | + | chr2_4:55092000-55092019 | None:intergenic | 35.0% |
| TGACATAAGAGCTAGTCAAT+TGG | - | chr2_4:55092143-55092162 | Msa0335870:CDS | 35.0% | |
| GACATAAGAGCTAGTCAATT+GGG | - | chr2_4:55092144-55092163 | Msa0335870:CDS | 35.0% | |
| CTGGAACTTTCTCAATTATC+AGG | + | chr2_4:55092242-55092261 | None:intergenic | 35.0% | |
| TCATTTACAGTGTGTTCTCT+TGG | + | chr2_4:55092414-55092433 | None:intergenic | 35.0% | |
| ACACTGTAAATGACATTGCA+GGG | - | chr2_4:55092421-55092440 | Msa0335870:CDS | 35.0% | |
| ACAGAAATTGTATGCACAAG+GGG | - | chr2_4:55092471-55092490 | Msa0335870:CDS | 35.0% | |
| ATCAAACACTTTGGTCTGAT+AGG | - | chr2_4:55092496-55092515 | Msa0335870:CDS | 35.0% | |
| TCCTGATATAAAGTAGGTTG+TGG | - | chr2_4:55092664-55092683 | Msa0335870:CDS | 35.0% | |
| ACCACAACCTACTTTATATC+AGG | + | chr2_4:55092668-55092687 | None:intergenic | 35.0% | |
| TGTATAGAATGTGTGGTACA+TGG | - | chr2_4:55092881-55092900 | Msa0335870:CDS | 35.0% | |
| AACTATGGGTACAGTATATG+GGG | - | chr2_4:55092926-55092945 | Msa0335870:CDS | 35.0% | |
| GAGAAGATTTACACTAAGTG+TGG | - | chr2_4:55093001-55093020 | Msa0335870:CDS | 35.0% | |
| TTATAGACTGTGATGAATGC+TGG | - | chr2_4:55093068-55093087 | Msa0335870:CDS | 35.0% | |
| ! | GAAAGGGATCCCTTTATTTA+TGG | - | chr2_4:55093110-55093129 | Msa0335870:CDS | 35.0% |
| AATCTTGAAGGAGACAAGTT+CGG | + | chr2_4:55093147-55093166 | None:intergenic | 35.0% | |
| !!! | TCATTTTTAGTGGATGGGTT+AGG | + | chr2_4:55093196-55093215 | None:intergenic | 35.0% |
| AACCCATCCACTAAAAATGA+AGG | - | chr2_4:55093196-55093215 | Msa0335870:intron | 35.0% | |
| !!! | GTACCTTCATTTTTAGTGGA+TGG | + | chr2_4:55093202-55093221 | None:intergenic | 35.0% |
| TGTTTGATATTGCGGATACT+TGG | - | chr2_4:55093239-55093258 | Msa0335870:intron | 35.0% | |
| ! | ATCATATTTTTCCCGATACG+AGG | - | chr2_4:55093285-55093304 | Msa0335870:intron | 35.0% |
| ! | TCATATTTTTCCCGATACGA+GGG | - | chr2_4:55093286-55093305 | Msa0335870:intron | 35.0% |
| TCATGTCAAATAGGAAAGCA+TGG | + | chr2_4:55093456-55093475 | None:intergenic | 35.0% | |
| TTGACATGAATGTCAAGTGT+TGG | - | chr2_4:55093467-55093486 | Msa0335870:intron | 35.0% | |
| ! | AGTTTGGGTTCAATTCAAAG+TGG | - | chr2_4:55093541-55093560 | Msa0335870:CDS | 35.0% |
| CAGGCTCTGTAAAAAATAGA+TGG | + | chr2_4:55093645-55093664 | None:intergenic | 35.0% | |
| GTTAAAGGAGTTAAAGGATC+AGG | + | chr2_4:55093998-55094017 | None:intergenic | 35.0% | |
| ! | CTGGTTTGAATAAGGGTTAA+AGG | + | chr2_4:55094013-55094032 | None:intergenic | 35.0% |
| ! | ACAACAAGCATATTTTGTGG+GGG | + | chr2_4:55094051-55094070 | None:intergenic | 35.0% |
| ! | GACAACAAGCATATTTTGTG+GGG | + | chr2_4:55094052-55094071 | None:intergenic | 35.0% |
| ! | TCTTGTGGTCTTTGTGATTT+TGG | - | chr2_4:55094568-55094587 | Msa0335870:intron | 35.0% |
| AAGCAGATGAATCTCGATTA+AGG | - | chr2_4:55094632-55094651 | Msa0335870:intron | 35.0% | |
| AGCAGATGAATCTCGATTAA+GGG | - | chr2_4:55094633-55094652 | Msa0335870:intron | 35.0% | |
| TGATCCAAATCAAGACCAAA+TGG | - | chr2_4:55094998-55095017 | Msa0335870:CDS | 35.0% | |
| TTGGTAAAATGAGAGCCATT+TGG | + | chr2_4:55095016-55095035 | None:intergenic | 35.0% | |
| !! | GAAGCAAGTTACAAGTTGAT+GGG | + | chr2_4:55095273-55095292 | None:intergenic | 35.0% |
| ! | AGAAGCAAGTTACAAGTTGA+TGG | + | chr2_4:55095274-55095293 | None:intergenic | 35.0% |
| TCATTACGACCAATTTGCGT+AGG | - | chr2_4:55089027-55089046 | Msa0335870:three_prime_UTR | 40.0% | |
| TAGGAGATTCCTACGCAAAT+TGG | + | chr2_4:55089039-55089058 | None:intergenic | 40.0% | |
| AATTTGCGTAGGAATCTCCT+AGG | - | chr2_4:55089038-55089057 | Msa0335870:three_prime_UTR | 40.0% | |
| GTTGAAGGAACTTAGAACCT+AGG | + | chr2_4:55089058-55089077 | None:intergenic | 40.0% | |
| TTGAAATTGGGGGAAGTTGA+AGG | + | chr2_4:55089073-55089092 | None:intergenic | 40.0% | |
| GATACTGCCAACTTTGTGTA+TGG | - | chr2_4:55089643-55089662 | Msa0335870:intron | 40.0% | |
| GAGATGAGAATGTGATTACG+TGG | + | chr2_4:55090048-55090067 | None:intergenic | 40.0% | |
| !! | TGTTTTTGCAGGTTCGCATA+TGG | - | chr2_4:55090068-55090087 | Msa0335870:CDS | 40.0% |
| AAAGTCTCGACACTTCTCAA+AGG | - | chr2_4:55090119-55090138 | Msa0335870:intron | 40.0% | |
| TTGGGTCTGTCAATTGTGTT+AGG | - | chr2_4:55090167-55090186 | Msa0335870:intron | 40.0% | |
| GTCTGTCAATTGTGTTAGGT+GGG | - | chr2_4:55090171-55090190 | Msa0335870:intron | 40.0% | |
| TGCAACAAACTTTCCATGCT+TGG | + | chr2_4:55090197-55090216 | None:intergenic | 40.0% | |
| !! | CATGGAAAGTTTGTTGCATC+AGG | - | chr2_4:55090199-55090218 | Msa0335870:intron | 40.0% |
| TTAATACATGAGAGGAAGCC+TGG | - | chr2_4:55090241-55090260 | Msa0335870:intron | 40.0% | |
| AGCCTCCAGATATTGAAAAC+TGG | - | chr2_4:55090293-55090312 | Msa0335870:intron | 40.0% | |
| AAAGTTGTGATGACTCTGAG+AGG | - | chr2_4:55090316-55090335 | Msa0335870:intron | 40.0% | |
| ! | AAGTTGTGATGACTCTGAGA+GGG | - | chr2_4:55090317-55090336 | Msa0335870:intron | 40.0% |
| !!! | ATGCCGGCTTTTTCTTTCTT+TGG | - | chr2_4:55090436-55090455 | Msa0335870:intron | 40.0% |
| CTAGCCAAAGAAGAATCATC+GGG | + | chr2_4:55090608-55090627 | None:intergenic | 40.0% | |
| GATGATTCTTCTTTGGCTAG+TGG | - | chr2_4:55090608-55090627 | Msa0335870:intron | 40.0% | |
| TGGACAACACCATCCATATA+TGG | - | chr2_4:55090636-55090655 | Msa0335870:intron | 40.0% | |
| AACAGCAGTGCAAATTCCAT+TGG | + | chr2_4:55090669-55090688 | None:intergenic | 40.0% | |
| ! | CTTGCTATGAAAGAGCCAAT+AGG | + | chr2_4:55090734-55090753 | None:intergenic | 40.0% |
| GTGATTGGAGTCTTGCTTAT+AGG | - | chr2_4:55090792-55090811 | Msa0335870:CDS | 40.0% | |
| AGTCTTGCTTATAGGACTGA+TGG | - | chr2_4:55090800-55090819 | Msa0335870:CDS | 40.0% | |
| CTTATAGGACTGATGGTCAT+TGG | - | chr2_4:55090807-55090826 | Msa0335870:CDS | 40.0% | |
| ! | AGCTTGGATCAACCTTTTTC+AGG | - | chr2_4:55091067-55091086 | Msa0335870:CDS | 40.0% |
| !!! | TTGGATCAACCTTTTTCAGG+CGG | - | chr2_4:55091070-55091089 | Msa0335870:CDS | 40.0% |
| ! | GTGGTAATGAAATGACCACA+TGG | + | chr2_4:55091108-55091127 | None:intergenic | 40.0% |
| CTTCTTGAAACCATGAGTAG+TGG | + | chr2_4:55091127-55091146 | None:intergenic | 40.0% | |
| ATTCCCCTCTTTCAAGAACT+GGG | + | chr2_4:55091164-55091183 | None:intergenic | 40.0% | |
| ACACAATGCTCCGATAATTG+TGG | - | chr2_4:55091209-55091228 | Msa0335870:CDS | 40.0% | |
| AATTCTTCTAATGCCCAGGA+AGG | - | chr2_4:55091261-55091280 | Msa0335870:intron | 40.0% | |
| ATTCTTCTAATGCCCAGGAA+GGG | - | chr2_4:55091262-55091281 | Msa0335870:intron | 40.0% | |
| TATTATTGCCATCGGAAGTC+AGG | - | chr2_4:55091353-55091372 | Msa0335870:intron | 40.0% | |
| TAGTCCACACTGTTATTGTC+CGG | + | chr2_4:55091380-55091399 | None:intergenic | 40.0% | |
| ! | CTTTTTGCATGTTCCTTGGA+TGG | - | chr2_4:55091604-55091623 | Msa0335870:intron | 40.0% |
| ! | TGTGGGTGCATTTCATTTTG+AGG | - | chr2_4:55091630-55091649 | Msa0335870:intron | 40.0% |
| GAGTTTAAATGATGCTGAGC+TGG | - | chr2_4:55091669-55091688 | Msa0335870:intron | 40.0% | |
| GAGTTGAAGAGAAGTCGTTA+TGG | - | chr2_4:55091694-55091713 | Msa0335870:CDS | 40.0% | |
| !! | CTTTTTGGCCGATGTTTGTT+TGG | + | chr2_4:55091788-55091807 | None:intergenic | 40.0% |
| CAAACAAACATCGGCCAAAA+AGG | - | chr2_4:55091786-55091805 | Msa0335870:CDS | 40.0% | |
| ! | GACATTAGAAACCGCCTTTT+TGG | + | chr2_4:55091803-55091822 | None:intergenic | 40.0% |
| ! | TTGGCGTTGTCTTCTTTTGT+TGG | + | chr2_4:55091825-55091844 | None:intergenic | 40.0% |
| ACAAAAGAAGACAACGCCAA+AGG | - | chr2_4:55091825-55091844 | Msa0335870:CDS | 40.0% | |
| ! | TCCTTAACGTCGTTAACTTG+AGG | + | chr2_4:55091889-55091908 | None:intergenic | 40.0% |
| TGCTTAACTGGACCAGAAAT+CGG | + | chr2_4:55091961-55091980 | None:intergenic | 40.0% | |
| ATAAGAGCTAGTCAATTGGG+AGG | - | chr2_4:55092147-55092166 | Msa0335870:CDS | 40.0% | |
| GAGAAAGTTCCAGATACATC+CGG | - | chr2_4:55092249-55092268 | Msa0335870:CDS | 40.0% | |
| AGGCATCAATGTTCAACAGA+TGG | - | chr2_4:55092278-55092297 | Msa0335870:CDS | 40.0% | |
| GGCATCAATGTTCAACAGAT+GGG | - | chr2_4:55092279-55092298 | Msa0335870:CDS | 40.0% | |
| TTTGATAAGAAAGGAGGGGA+CGG | - | chr2_4:55092360-55092379 | Msa0335870:CDS | 40.0% | |
| CACACTGTAAATGACATTGC+AGG | - | chr2_4:55092420-55092439 | Msa0335870:CDS | 40.0% | |
| CAGAAATTGTATGCACAAGG+GGG | - | chr2_4:55092472-55092491 | Msa0335870:CDS | 40.0% | |
| AGAAATTGTATGCACAAGGG+GGG | - | chr2_4:55092473-55092492 | Msa0335870:CDS | 40.0% | |
| CTTTGGTCTGATAGGATATC+AGG | - | chr2_4:55092504-55092523 | Msa0335870:CDS | 40.0% | |
| !!! | GGAAAAGTCACTGTTTTAGC+TGG | - | chr2_4:55092525-55092544 | Msa0335870:CDS | 40.0% |
| TGCAATGCCTACAATGATGA+TGG | - | chr2_4:55093030-55093049 | Msa0335870:CDS | 40.0% | |
| GCAATGCCTACAATGATGAT+GGG | - | chr2_4:55093031-55093050 | Msa0335870:CDS | 40.0% | |
| GATGATCCCATCATCATTGT+AGG | + | chr2_4:55093040-55093059 | None:intergenic | 40.0% | |
| ATTGATGCTGGTGACAAGAA+AGG | - | chr2_4:55093093-55093112 | Msa0335870:CDS | 40.0% | |
| TTGATGCTGGTGACAAGAAA+GGG | - | chr2_4:55093094-55093113 | Msa0335870:CDS | 40.0% | |
| TCTGCAAAGCTATCAAAGTC+TGG | - | chr2_4:55093403-55093422 | Msa0335870:intron | 40.0% | |
| !! | TGAATGTCAAGTGTTGGCTT+AGG | - | chr2_4:55093473-55093492 | Msa0335870:intron | 40.0% |
| !! | GAATGTCAAGTGTTGGCTTA+GGG | - | chr2_4:55093474-55093493 | Msa0335870:intron | 40.0% |
| AGCTGGCAAAATTTGATGCA+GGG | + | chr2_4:55093516-55093535 | None:intergenic | 40.0% | |
| ! | CATCAAATTTTGCCAGCTCT+TGG | - | chr2_4:55093518-55093537 | Msa0335870:CDS | 40.0% |
| TTCAATTCAAAGTGGTGAGC+TGG | - | chr2_4:55093549-55093568 | Msa0335870:CDS | 40.0% | |
| ! | CAACAAGCATATTTTGTGGG+GGG | + | chr2_4:55094050-55094069 | None:intergenic | 40.0% |
| TTGGCAGAATGACTGATGAT+GGG | - | chr2_4:55094171-55094190 | Msa0335870:CDS | 40.0% | |
| AGCCAATTGAGCTTCCAAAT+GGG | + | chr2_4:55094210-55094229 | None:intergenic | 40.0% | |
| AAGCCAATTGAGCTTCCAAA+TGG | + | chr2_4:55094211-55094230 | None:intergenic | 40.0% | |
| !! | TAGGCATTGGCGATATTCAT+TGG | + | chr2_4:55094255-55094274 | None:intergenic | 40.0% |
| GTACATAGGACAATAGGCAT+TGG | + | chr2_4:55094268-55094287 | None:intergenic | 40.0% | |
| ! | GAAAGCGTACATAGGACAAT+AGG | + | chr2_4:55094274-55094293 | None:intergenic | 40.0% |
| TGCATGATAGCTACATCTTG+TGG | - | chr2_4:55094553-55094572 | Msa0335870:intron | 40.0% | |
| ACCAACAAAACGTAGACGAT+TGG | - | chr2_4:55094806-55094825 | Msa0335870:intron | 40.0% | |
| ! | ACCAATCGTCTACGTTTTGT+TGG | + | chr2_4:55094810-55094829 | None:intergenic | 40.0% |
| ! | TTTTCTTGCCGAATCTTTGC+AGG | - | chr2_4:55094860-55094879 | Msa0335870:intron | 40.0% |
| TTTCTTGCCGAATCTTTGCA+GGG | - | chr2_4:55094861-55094880 | Msa0335870:intron | 40.0% | |
| GGAAGATATTCTTCCATCGA+TGG | - | chr2_4:55094908-55094927 | Msa0335870:intron | 40.0% | |
| !! | AGAGCCATTTGGTCTTGATT+TGG | + | chr2_4:55095005-55095024 | None:intergenic | 40.0% |
| TGAACTGTTCTCAATCGGTT+TGG | + | chr2_4:55095057-55095076 | None:intergenic | 40.0% | |
| GCTACTGAACTGTTCTCAAT+CGG | + | chr2_4:55095062-55095081 | None:intergenic | 40.0% | |
| !! | AGTACCTTTGAAGTGTGTGT+TGG | + | chr2_4:55095216-55095235 | None:intergenic | 40.0% |
| ! | ACCTAGTTGGCTTAGACATG+AGG | - | chr2_4:55089182-55089201 | Msa0335870:CDS | 45.0% |
| ! | CCTAGTTGGCTTAGACATGA+GGG | - | chr2_4:55089183-55089202 | Msa0335870:CDS | 45.0% |
| TCCATTGATGTTCAACCTGG+TGG | - | chr2_4:55089219-55089238 | Msa0335870:CDS | 45.0% | |
| ! | TCCACCAGGTTGAACATCAA+TGG | + | chr2_4:55089223-55089242 | None:intergenic | 45.0% |
| GGTCTGTCAATTGTGTTAGG+TGG | - | chr2_4:55090170-55090189 | Msa0335870:intron | 45.0% | |
| GCATTCCAATAACGAGCTAG+AGG | + | chr2_4:55090510-55090529 | None:intergenic | 45.0% | |
| AGATCGACCTACTTTACGCA+TGG | + | chr2_4:55090575-55090594 | None:intergenic | 45.0% | |
| GTCTCCCGATGATTCTTCTT+TGG | - | chr2_4:55090601-55090620 | Msa0335870:intron | 45.0% | |
| TTCTTTGGCTAGTGGGAGTT+TGG | - | chr2_4:55090616-55090635 | Msa0335870:intron | 45.0% | |
| CTCATGGTTTCAAGAAGCCT+AGG | - | chr2_4:55091130-55091149 | Msa0335870:CDS | 45.0% | |
| TTCCCCTCTTTCAAGAACTG+GGG | + | chr2_4:55091163-55091182 | None:intergenic | 45.0% | |
| CATTCCCCTCTTTCAAGAAC+TGG | + | chr2_4:55091165-55091184 | None:intergenic | 45.0% | |
| CAGTTCTTGAAAGAGGGGAA+TGG | - | chr2_4:55091163-55091182 | Msa0335870:CDS | 45.0% | |
| ATGCTCCGATAATTGTGGTG+AGG | - | chr2_4:55091214-55091233 | Msa0335870:CDS | 45.0% | |
| AGTCTCAGATTTCCCTTCCT+GGG | + | chr2_4:55091277-55091296 | None:intergenic | 45.0% | |
| ! | GAAGGGAAATCTGAGACTGT+CGG | - | chr2_4:55091279-55091298 | Msa0335870:intron | 45.0% |
| ! | AAGGGAAATCTGAGACTGTC+GGG | - | chr2_4:55091280-55091299 | Msa0335870:intron | 45.0% |
| ATTGTAAGGCTGTGGCTCTT+TGG | + | chr2_4:55091334-55091353 | None:intergenic | 45.0% | |
| ATGTTCCTTGGATGGATCTG+TGG | - | chr2_4:55091612-55091631 | Msa0335870:intron | 45.0% | |
| TGTTCCTTGGATGGATCTGT+GGG | - | chr2_4:55091613-55091632 | Msa0335870:intron | 45.0% | |
| ! | GCTTCTAGAAGTAACTGTGC+CGG | + | chr2_4:55091757-55091776 | None:intergenic | 45.0% |
| ACAAACATCGGCCAAAAAGG+CGG | - | chr2_4:55091789-55091808 | Msa0335870:CDS | 45.0% | |
| CAAAGGCTTGTGTTAGTGCA+GGG | - | chr2_4:55091842-55091861 | Msa0335870:CDS | 45.0% | |
| ! | AACGTCGTTAACTTGAGGCT+TGG | + | chr2_4:55091884-55091903 | None:intergenic | 45.0% |
| GCCTCAAGTTAACGACGTTA+AGG | - | chr2_4:55091885-55091904 | Msa0335870:CDS | 45.0% | |
| GTTAACGACGTTAAGGAGAC+CGG | - | chr2_4:55091892-55091911 | Msa0335870:CDS | 45.0% | |
| TGTAGGCAATGAGCCAAACA+TGG | - | chr2_4:55091921-55091940 | Msa0335870:CDS | 45.0% | |
| CCAGTGGTTGTAACCATGTT+TGG | + | chr2_4:55091937-55091956 | None:intergenic | 45.0% | |
| CCAAACATGGTTACAACCAC+TGG | - | chr2_4:55091934-55091953 | Msa0335870:CDS | 45.0% | |
| ! | AAAGAGTATAGACGCCCTGA+TGG | - | chr2_4:55091982-55092001 | Msa0335870:CDS | 45.0% |
| GAAATGCTTTCCGGTTGAAC+AGG | + | chr2_4:55092042-55092061 | None:intergenic | 45.0% | |
| ! | ATTAAGTTGCTGAGCTGCAC+TGG | + | chr2_4:55092064-55092083 | None:intergenic | 45.0% |
| TATCAGGCCGTCAGAAATTG+TGG | + | chr2_4:55092226-55092245 | None:intergenic | 45.0% | |
| AACATTGATGCCTCCATCAC+CGG | + | chr2_4:55092271-55092290 | None:intergenic | 45.0% | |
| ! | CGGTACTTCACCTGTTCTTT+TGG | - | chr2_4:55092380-55092399 | Msa0335870:CDS | 45.0% |
| TGTAAATGACATTGCAGGGC+TGG | - | chr2_4:55092425-55092444 | Msa0335870:CDS | 45.0% | |
| TAGCTGGCAATGCGAATTTC+TGG | - | chr2_4:55092541-55092560 | Msa0335870:CDS | 45.0% | |
| AGCTGGCAATGCGAATTTCT+GGG | - | chr2_4:55092542-55092561 | Msa0335870:CDS | 45.0% | |
| ! | AATGCGAATTTCTGGGCTGT+TGG | - | chr2_4:55092549-55092568 | Msa0335870:CDS | 45.0% |
| ! | ATGCGAATTTCTGGGCTGTT+GGG | - | chr2_4:55092550-55092569 | Msa0335870:CDS | 45.0% |
| TGAATGCTGGACATTGATGC+TGG | - | chr2_4:55093081-55093100 | Msa0335870:CDS | 45.0% | |
| AAGGCATGTTTCCCTCGTAT+CGG | + | chr2_4:55093300-55093319 | None:intergenic | 45.0% | |
| GAGCTGGCAAAATTTGATGC+AGG | + | chr2_4:55093517-55093536 | None:intergenic | 45.0% | |
| ! | TTTTGCCAGCTCTTGGAGTT+TGG | - | chr2_4:55093525-55093544 | Msa0335870:CDS | 45.0% |
| TTTGCCAGCTCTTGGAGTTT+GGG | - | chr2_4:55093526-55093545 | Msa0335870:CDS | 45.0% | |
| !! | AAATATTTGGCTCGGAAGCC+TGG | - | chr2_4:55093595-55093614 | Msa0335870:CDS | 45.0% |
| ATTACACACCTTGTCCAACC+AGG | + | chr2_4:55093616-55093635 | None:intergenic | 45.0% | |
| AAGGATCAGGGTTCAAACTC+TGG | + | chr2_4:55093985-55094004 | None:intergenic | 45.0% | |
| ! | GCATATTTTGTGGGGGGATT+GGG | + | chr2_4:55094044-55094063 | None:intergenic | 45.0% |
| ! | AGCATATTTTGTGGGGGGAT+TGG | + | chr2_4:55094045-55094064 | None:intergenic | 45.0% |
| CTTGGCAGAATGACTGATGA+TGG | - | chr2_4:55094170-55094189 | Msa0335870:CDS | 45.0% | |
| ! | TGGCAGAATGACTGATGATG+GGG | - | chr2_4:55094172-55094191 | Msa0335870:intron | 45.0% |
| TGCCCATTTGGAAGCTCAAT+TGG | - | chr2_4:55094205-55094224 | Msa0335870:intron | 45.0% | |
| ! | AGCTCAATTGGCTTCATCCT+TGG | - | chr2_4:55094217-55094236 | Msa0335870:intron | 45.0% |
| ! | ATTGGCTTCATCCTTGGCTT+TGG | - | chr2_4:55094223-55094242 | Msa0335870:intron | 45.0% |
| ! | TTGGCTTCATCCTTGGCTTT+GGG | - | chr2_4:55094224-55094243 | Msa0335870:intron | 45.0% |
| ! | CCTTGCAAGAAAGCGTACAT+AGG | + | chr2_4:55094282-55094301 | None:intergenic | 45.0% |
| CCTATGTACGCTTTCTTGCA+AGG | - | chr2_4:55094279-55094298 | Msa0335870:intron | 45.0% | |
| GACAAAAAGCAAAGAGCGAG+AGG | + | chr2_4:55094441-55094460 | None:intergenic | 45.0% | |
| TCGATTAAGGGAAGTCTGTG+AGG | - | chr2_4:55094645-55094664 | Msa0335870:intron | 45.0% | |
| CGATTAAGGGAAGTCTGTGA+GGG | - | chr2_4:55094646-55094665 | Msa0335870:intron | 45.0% | |
| CCTCATTCCCTGCAAAGATT+CGG | + | chr2_4:55094871-55094890 | None:intergenic | 45.0% | |
| TGAGGAAACACAAGCTTCTC+AGG | - | chr2_4:55094886-55094905 | Msa0335870:intron | 45.0% | |
| GAGGAAACACAAGCTTCTCA+GGG | - | chr2_4:55094887-55094906 | Msa0335870:intron | 45.0% | |
| GTTGCTGGTGAAGATGACTT+TGG | + | chr2_4:55095035-55095054 | None:intergenic | 45.0% | |
| !! | TTCTCAATCGGTTTGGTTGC+TGG | + | chr2_4:55095050-55095069 | None:intergenic | 45.0% |
| CAGTTCAGTAGCAATCGACA+AGG | - | chr2_4:55095070-55095089 | Msa0335870:CDS | 45.0% | |
| TTCAGTAGCAATCGACAAGG+AGG | - | chr2_4:55095073-55095092 | Msa0335870:CDS | 45.0% | |
| AGCACCAACACACACTTCAA+AGG | - | chr2_4:55095209-55095228 | Msa0335870:five_prime_UTR | 45.0% | |
| CCCTCATGTCTAAGCCAACT+AGG | + | chr2_4:55089186-55089205 | None:intergenic | 50.0% | |
| GTAGCAAATCTGAGTCCACC+AGG | + | chr2_4:55089237-55089256 | None:intergenic | 50.0% | |
| !! | GGTGGACTCAGATTTGCTAC+TGG | - | chr2_4:55089237-55089256 | Msa0335870:CDS | 50.0% |
| !! | GGACTCAGATTTGCTACTGG+TGG | - | chr2_4:55089240-55089259 | Msa0335870:CDS | 50.0% |
| !! | CTCAGATTTGCTACTGGTGG+TGG | - | chr2_4:55089243-55089262 | Msa0335870:CDS | 50.0% |
| ! | GAAATCTCTTGGTGCGGACA+TGG | - | chr2_4:55090096-55090115 | Msa0335870:intron | 50.0% |
| AAAGGCTTCTTGCAACCCTG+CGG | - | chr2_4:55090137-55090156 | Msa0335870:intron | 50.0% | |
| TGCATCAGGGTCTGATGATC+AGG | - | chr2_4:55090213-55090232 | Msa0335870:intron | 50.0% | |
| AATTCCGTGGTTCCTGAACC+AGG | + | chr2_4:55090262-55090281 | None:intergenic | 50.0% | |
| GGTTCAGGAACCACGGAATT+TGG | - | chr2_4:55090262-55090281 | Msa0335870:intron | 50.0% | |
| ! | ACGTGCCTCTAGCTCGTTAT+TGG | - | chr2_4:55090502-55090521 | Msa0335870:intron | 50.0% |
| !! | GGCCACTCTAGCCTTGTTAA+GGG | - | chr2_4:55090695-55090714 | Msa0335870:CDS | 50.0% |
| !! | GCCACTCTAGCCTTGTTAAG+GGG | - | chr2_4:55090696-55090715 | Msa0335870:CDS | 50.0% |
| !! | CCACTCTAGCCTTGTTAAGG+GGG | - | chr2_4:55090697-55090716 | Msa0335870:CDS | 50.0% |
| !!! | TCAACCTTTTTCAGGCGGCT+TGG | - | chr2_4:55091075-55091094 | Msa0335870:CDS | 50.0% |
| TCTGCCCCAGTTCTTGAAAG+AGG | - | chr2_4:55091156-55091175 | Msa0335870:CDS | 50.0% | |
| CTGCCCCAGTTCTTGAAAGA+GGG | - | chr2_4:55091157-55091176 | Msa0335870:CDS | 50.0% | |
| TGCCCCAGTTCTTGAAAGAG+GGG | - | chr2_4:55091158-55091177 | Msa0335870:CDS | 50.0% | |
| CAGTCTCAGATTTCCCTTCC+TGG | + | chr2_4:55091278-55091297 | None:intergenic | 50.0% | |
| TGGCTCTTTGGATCCAGTCT+TGG | + | chr2_4:55091322-55091341 | None:intergenic | 50.0% | |
| AGGACCGGACAATAACAGTG+TGG | - | chr2_4:55091373-55091392 | Msa0335870:intron | 50.0% | |
| !!! | TTTTGAAACAGGAGCCCCGA+TGG | - | chr2_4:55091574-55091593 | Msa0335870:intron | 50.0% |
| AGTCGTTATGGCGATGTGAG+TGG | - | chr2_4:55091706-55091725 | Msa0335870:CDS | 50.0% | |
| GTCGTTATGGCGATGTGAGT+GGG | - | chr2_4:55091707-55091726 | Msa0335870:CDS | 50.0% | |
| CCTGCACTAACACAAGCCTT+TGG | + | chr2_4:55091844-55091863 | None:intergenic | 50.0% | |
| CCAAAGGCTTGTGTTAGTGC+AGG | - | chr2_4:55091841-55091860 | Msa0335870:CDS | 50.0% | |
| CTCATTGCCTACAGAACCTC+CGG | + | chr2_4:55091914-55091933 | None:intergenic | 50.0% | |
| ACAACCACTGGTCCGATTTC+TGG | - | chr2_4:55091946-55091965 | Msa0335870:CDS | 50.0% | |
| ACAGGCACTCCAACTACTTC+TGG | + | chr2_4:55092024-55092043 | None:intergenic | 50.0% | |
| ! | AGTTGGAGTGCCTGTTCAAC+CGG | - | chr2_4:55092029-55092048 | Msa0335870:CDS | 50.0% |
| GCTGCACTGGAAATGCTTTC+CGG | + | chr2_4:55092051-55092070 | None:intergenic | 50.0% | |
| !! | AACGTTCTGGGGTTACTGCT+AGG | - | chr2_4:55092199-55092218 | Msa0335870:CDS | 50.0% |
| !! | ACGTTCTGGGGTTACTGCTA+GGG | - | chr2_4:55092200-55092219 | Msa0335870:CDS | 50.0% |
| GCTAGGGCCACAATTTCTGA+CGG | - | chr2_4:55092216-55092235 | Msa0335870:CDS | 50.0% | |
| GTTCCAGATACATCCGGTGA+TGG | - | chr2_4:55092255-55092274 | Msa0335870:CDS | 50.0% | |
| GGACGTGCTTCCAAAAGAAC+AGG | + | chr2_4:55092393-55092412 | None:intergenic | 50.0% | |
| CAAGGGGGGATCAAACACTT+TGG | - | chr2_4:55092487-55092506 | Msa0335870:CDS | 50.0% | |
| GTGTGAAGATGGATGTCTGC+AGG | - | chr2_4:55092572-55092591 | Msa0335870:CDS | 50.0% | |
| AGGCATGTTTCCCTCGTATC+GGG | + | chr2_4:55093299-55093318 | None:intergenic | 50.0% | |
| TGTTGCCAACACAACAAGCG+GGG | + | chr2_4:55093431-55093450 | None:intergenic | 50.0% | |
| GTGTTGCCAACACAACAAGC+GGG | + | chr2_4:55093432-55093451 | None:intergenic | 50.0% | |
| CGTGTTGCCAACACAACAAG+CGG | + | chr2_4:55093433-55093452 | None:intergenic | 50.0% | |
| TGAACCCAAACTCCAAGAGC+TGG | + | chr2_4:55093533-55093552 | None:intergenic | 50.0% | |
| CAGGGTTCAAACTCTGGTGA+AGG | + | chr2_4:55093979-55093998 | None:intergenic | 50.0% | |
| ATTGGCAGATCCCAAAGCCA+AGG | + | chr2_4:55094237-55094256 | None:intergenic | 50.0% | |
| CTGGGGGAGTAGAAAACAAC+AGG | + | chr2_4:55094410-55094429 | None:intergenic | 50.0% | |
| GCAAAGAGCGAGAGGATTAG+TGG | + | chr2_4:55094433-55094452 | None:intergenic | 50.0% | |
| GAAGTCTGTGAGGGTTTCCT+TGG | - | chr2_4:55094655-55094674 | Msa0335870:intron | 50.0% | |
| GTTTCCTTGGACCTCCAACA+GGG | - | chr2_4:55094668-55094687 | Msa0335870:intron | 50.0% | |
| CCGAATCTTTGCAGGGAATG+AGG | - | chr2_4:55094868-55094887 | Msa0335870:intron | 50.0% | |
| TTTCTGTTCGACGCCATCGA+TGG | + | chr2_4:55094924-55094943 | None:intergenic | 50.0% | |
| GTAGCAATCGACAAGGAGGA+CGG | - | chr2_4:55095077-55095096 | Msa0335870:CDS | 50.0% | |
| CGGTGCTCAAGCAAAGACAT+TGG | - | chr2_4:55095097-55095116 | Msa0335870:exon | 50.0% | |
| !! | TACTGGTGGTGGTGACCACA+AGG | - | chr2_4:55089254-55089273 | Msa0335870:CDS | 55.0% |
| AAGGCTTCTTGCAACCCTGC+GGG | - | chr2_4:55090138-55090157 | Msa0335870:intron | 55.0% | |
| CAACCCTGCGGGATCACTTT+GGG | - | chr2_4:55090149-55090168 | Msa0335870:intron | 55.0% | |
| AGACCCAAAGTGATCCCGCA+GGG | + | chr2_4:55090155-55090174 | None:intergenic | 55.0% | |
| TGTGTTAGGTGGGCCAAGCA+TGG | - | chr2_4:55090181-55090200 | Msa0335870:intron | 55.0% | |
| CATGAGAGGAAGCCTGGTTC+AGG | - | chr2_4:55090247-55090266 | Msa0335870:intron | 55.0% | |
| GAAGCCTGGTTCAGGAACCA+CGG | - | chr2_4:55090255-55090274 | Msa0335870:intron | 55.0% | |
| GGAACCACGGAATTTGGCAG+TGG | - | chr2_4:55090268-55090287 | Msa0335870:intron | 55.0% | |
| CTCTCCACTGCCAAATTCCG+TGG | + | chr2_4:55090275-55090294 | None:intergenic | 55.0% | |
| !! | GGGCCACTCTAGCCTTGTTA+AGG | - | chr2_4:55090694-55090713 | Msa0335870:CDS | 55.0% |
| CCCCCTTAACAAGGCTAGAG+TGG | + | chr2_4:55090700-55090719 | None:intergenic | 55.0% | |
| CCTTGTTAAGGGGGTTGCGT+GGG | - | chr2_4:55090706-55090725 | Msa0335870:CDS | 55.0% | |
| CCATCCAAGCCGCCTGAAAA+AGG | + | chr2_4:55091082-55091101 | None:intergenic | 55.0% | |
| !!! | CCTTTTTCAGGCGGCTTGGA+TGG | - | chr2_4:55091079-55091098 | Msa0335870:CDS | 55.0% |
| AGAACTGGGGCAGAATGCCT+AGG | + | chr2_4:55091150-55091169 | None:intergenic | 55.0% | |
| ! | GGAAATCTGAGACTGTCGGG+TGG | - | chr2_4:55091283-55091302 | Msa0335870:intron | 55.0% |
| AGCAACGGTGCTTCCAAGAC+TGG | - | chr2_4:55091306-55091325 | Msa0335870:intron | 55.0% | |
| TTGCCATCGGAAGTCAGGAC+CGG | - | chr2_4:55091358-55091377 | Msa0335870:intron | 55.0% | |
| TGCACCCACAGATCCATCCA+AGG | + | chr2_4:55091620-55091639 | None:intergenic | 55.0% | |
| AACGACGTTAAGGAGACCGG+AGG | - | chr2_4:55091895-55091914 | Msa0335870:CDS | 55.0% | |
| AAGGAGACCGGAGGTTCTGT+AGG | - | chr2_4:55091904-55091923 | Msa0335870:CDS | 55.0% | |
| TGGACCAGAAATCGGACCAG+TGG | + | chr2_4:55091953-55091972 | None:intergenic | 55.0% | |
| CCTCCATCACCGGATGTATC+TGG | + | chr2_4:55092261-55092280 | None:intergenic | 55.0% | |
| ! | CCAGATACATCCGGTGATGG+AGG | - | chr2_4:55092258-55092277 | Msa0335870:CDS | 55.0% |
| TGGGCTGTTGGGTGTGAAGA+TGG | - | chr2_4:55092561-55092580 | Msa0335870:CDS | 55.0% | |
| !! | TGGTTCCCCGCTTGTTGTGT+TGG | - | chr2_4:55093423-55093442 | Msa0335870:intron | 55.0% |
| ! | TGGTGAGCTGGCTGCTTTAC+AGG | - | chr2_4:55093561-55093580 | Msa0335870:CDS | 55.0% |
| !! | ATTTGGCTCGGAAGCCTGGT+TGG | - | chr2_4:55093599-55093618 | Msa0335870:CDS | 55.0% |
| GGGGGATTGGGTAGCTAAAC+TGG | + | chr2_4:55094032-55094051 | None:intergenic | 55.0% | |
| ! | AGCGAGAGGATTAGTGGCTG+GGG | + | chr2_4:55094427-55094446 | None:intergenic | 55.0% |
| ! | GAGCGAGAGGATTAGTGGCT+GGG | + | chr2_4:55094428-55094447 | None:intergenic | 55.0% |
| ! | AGAGCGAGAGGATTAGTGGC+TGG | + | chr2_4:55094429-55094448 | None:intergenic | 55.0% |
| GGTTTCCTTGGACCTCCAAC+AGG | - | chr2_4:55094667-55094686 | Msa0335870:intron | 55.0% | |
| GCAACCCTGCGGGATCACTT+TGG | - | chr2_4:55090148-55090167 | Msa0335870:intron | 60.0% | |
| CAGACCCAAAGTGATCCCGC+AGG | + | chr2_4:55090156-55090175 | None:intergenic | 60.0% | |
| !! | GAGAGGGCACTCTGCTGATG+TGG | - | chr2_4:55090333-55090352 | Msa0335870:intron | 60.0% |
| ! | GCCTTGTTAAGGGGGTTGCG+TGG | - | chr2_4:55090705-55090724 | Msa0335870:CDS | 60.0% |
| CCCACGCAACCCCCTTAACA+AGG | + | chr2_4:55090709-55090728 | None:intergenic | 60.0% | |
| GGGGTTGCGTGGGATCCTAT+TGG | - | chr2_4:55090716-55090735 | Msa0335870:CDS | 60.0% | |
| ! | CGGCTTGGATGGTCTCCATG+TGG | - | chr2_4:55091090-55091109 | Msa0335870:CDS | 60.0% |
| GAGACTGTCGGGTGGAGCAA+CGG | - | chr2_4:55091291-55091310 | Msa0335870:intron | 60.0% | |
| TGTCCGGTCCTGACTTCCGA+TGG | + | chr2_4:55091364-55091383 | None:intergenic | 60.0% | |
| CTCGGAAGCCTGGTTGGACA+AGG | - | chr2_4:55093605-55093624 | Msa0335870:CDS | 60.0% | |
| GGTGCAGACACGTGCCCATT+TGG | - | chr2_4:55094193-55094212 | Msa0335870:intron | 60.0% | |
| ! | GCGAGAGGATTAGTGGCTGG+GGG | + | chr2_4:55094426-55094445 | None:intergenic | 60.0% |
| CCATCCCTGTTGGAGGTCCA+AGG | + | chr2_4:55094675-55094694 | None:intergenic | 60.0% | |
| CCTTGGACCTCCAACAGGGA+TGG | - | chr2_4:55094672-55094691 | Msa0335870:intron | 60.0% | |
| ACCTCCAACAGGGATGGCTG+AGG | - | chr2_4:55094678-55094697 | Msa0335870:intron | 60.0% | |
| TCCTCAGCCATCCCTGTTGG+AGG | + | chr2_4:55094682-55094701 | None:intergenic | 60.0% | |
| GGTTCCTCAGCCATCCCTGT+TGG | + | chr2_4:55094685-55094704 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 55088925 | 55095344 | 55088925 | ID=Msa0335870;Name=Msa0335870 |
| chr2_4 | mRNA | 55088925 | 55095344 | 55088925 | ID=Msa0335870-mRNA-1;Parent=Msa0335870;Name=Msa0335870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=243|0.88|0.8|1|1|1|10|220|958 |
| chr2_4 | exon | 55088925 | 55089387 | 55088925 | ID=Msa0335870-mRNA-1:exon:16713;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55089522 | 55089639 | 55089522 | ID=Msa0335870-mRNA-1:exon:16712;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55089969 | 55090091 | 55089969 | ID=Msa0335870-mRNA-1:exon:16711;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55090643 | 55090883 | 55090643 | ID=Msa0335870-mRNA-1:exon:16710;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55091052 | 55091262 | 55091052 | ID=Msa0335870-mRNA-1:exon:16709;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55091676 | 55092684 | 55091676 | ID=Msa0335870-mRNA-1:exon:16708;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55092803 | 55093180 | 55092803 | ID=Msa0335870-mRNA-1:exon:16707;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55093513 | 55093682 | 55093513 | ID=Msa0335870-mRNA-1:exon:16706;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55093915 | 55094190 | 55093915 | ID=Msa0335870-mRNA-1:exon:16705;Parent=Msa0335870-mRNA-1 |
| chr2_4 | exon | 55094994 | 55095344 | 55094994 | ID=Msa0335870-mRNA-1:exon:16704;Parent=Msa0335870-mRNA-1 |
| chr2_4 | five_prime_UTR | 55095102 | 55095344 | 55095102 | ID=Msa0335870-mRNA-1:five_prime_utr;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55094994 | 55095101 | 55094994 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55093915 | 55094190 | 55093915 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55093513 | 55093682 | 55093513 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55092803 | 55093180 | 55092803 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55091676 | 55092684 | 55091676 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55091052 | 55091262 | 55091052 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55090643 | 55090883 | 55090643 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55089969 | 55090091 | 55089969 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55089522 | 55089639 | 55089522 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | CDS | 55089145 | 55089387 | 55089145 | ID=Msa0335870-mRNA-1:cds;Parent=Msa0335870-mRNA-1 |
| chr2_4 | three_prime_UTR | 55088925 | 55089144 | 55088925 | ID=Msa0335870-mRNA-1:three_prime_utr;Parent=Msa0335870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
