Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206060 | KEH37887.1 | 91.266 | 229 | 20 | 0 | 1 | 229 | 195 | 423 | 1.37e-155 | 448 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206060 | A0A072V7X2 | 91.266 | 229 | 20 | 0 | 1 | 229 | 195 | 423 | 6.53e-156 | 448 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0206050 | Msa0206060 | 0.921553 | 3.085849e-88 | -8.615850e-47 |
| Msa0206060 | Msa0296820 | -0.827591 | 1.437891e-54 | -8.615850e-47 |
| Msa0206060 | Msa0326080 | 0.958368 | 2.803461e-116 | -8.615850e-47 |
| Msa0206060 | Msa1083970 | -0.829991 | 3.775378e-55 | -8.615850e-47 |
| Msa0206060 | Msa1180500 | -0.800163 | 1.639103e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206060 | MtrunA17_Chr2g0304631 | 91.266 | 229 | 20 | 0 | 1 | 229 | 300 | 528 | 8.51e-157 | 445 |
| Msa0206060 | MtrunA17_Chr3g0137351 | 59.556 | 225 | 91 | 0 | 1 | 225 | 300 | 524 | 7.00e-103 | 309 |
| Msa0206060 | MtrunA17_Chr4g0065021 | 50.000 | 210 | 99 | 1 | 16 | 225 | 1 | 204 | 1.27e-76 | 229 |
| Msa0206060 | MtrunA17_Chr1g0208531 | 47.534 | 223 | 115 | 2 | 1 | 222 | 308 | 529 | 1.19e-68 | 220 |
| Msa0206060 | MtrunA17_Chr2g0329621 | 22.273 | 220 | 148 | 6 | 3 | 218 | 286 | 486 | 4.49e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206060 | AT2G12400.1 | 66.667 | 225 | 75 | 0 | 4 | 228 | 306 | 530 | 3.35e-105 | 314 |
| Msa0206060 | AT2G25270.1 | 54.378 | 217 | 99 | 0 | 4 | 220 | 311 | 527 | 1.71e-90 | 276 |
| Msa0206060 | AT1G80540.2 | 44.889 | 225 | 124 | 0 | 1 | 225 | 153 | 377 | 1.80e-70 | 220 |
| Msa0206060 | AT1G80540.3 | 45.495 | 222 | 121 | 0 | 4 | 225 | 263 | 484 | 3.96e-69 | 220 |
| Msa0206060 | AT1G71110.1 | 48.430 | 223 | 113 | 2 | 1 | 222 | 304 | 525 | 4.08e-69 | 221 |
| Msa0206060 | AT1G80540.1 | 44.889 | 225 | 124 | 0 | 1 | 225 | 306 | 530 | 9.52e-69 | 220 |
Find 67 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAACCGGGGCAATATTTC+TGG | 0.165773 | 2_1:+34364042 | None:intergenic |
| ATATCATTATGTTCCATTCT+TGG | 0.215043 | 2_1:-34364114 | Msa0206060:CDS |
| CGTAGATCCATCGACTATTA+TGG | 0.301916 | 2_1:+34364018 | None:intergenic |
| CATTCACAGCAGCTTCCATT+TGG | 0.348064 | 2_1:+34364150 | None:intergenic |
| TAATGCTGTCCATGATCCTT+TGG | 0.360625 | 2_1:-34363968 | Msa0206060:CDS |
| TACACTAAACAGTTCATTGC+TGG | 0.381354 | 2_1:-34363912 | Msa0206060:CDS |
| ACATGGAAGAATTTCGTCTA+AGG | 0.389229 | 2_1:+34365816 | None:intergenic |
| GACGCGTCAGCTAGTTATAT+TGG | 0.393683 | 2_1:-34365746 | Msa0206060:CDS |
| ACAGTGAGGCAATGTGAAAC+CGG | 0.405244 | 2_1:-34365604 | Msa0206060:CDS |
| CCCGACTATTTCTTCCCAAA+TGG | 0.425178 | 2_1:-34364165 | Msa0206060:CDS |
| TCGACTATTATGGCGCAAAC+CGG | 0.432486 | 2_1:+34364028 | None:intergenic |
| ATTCACAGCAGCTTCCATTT+GGG | 0.452881 | 2_1:+34364151 | None:intergenic |
| CACATCCCTGCTTTGTAACA+AGG | 0.454367 | 2_1:+34365768 | None:intergenic |
| CGACTATTATGGCGCAAACC+GGG | 0.457302 | 2_1:+34364029 | None:intergenic |
| CATTGCCTCACTGTGAGGTC+AGG | 0.463337 | 2_1:+34365613 | None:intergenic |
| GGACAAAAGTGCAGTCTTGT+AGG | 0.463497 | 2_1:+34364087 | None:intergenic |
| CCATTTGGGAAGAAATAGTC+GGG | 0.466333 | 2_1:+34364165 | None:intergenic |
| AATGCTGTCCATGATCCTTT+GGG | 0.478725 | 2_1:-34363967 | Msa0206060:CDS |
| CCTGTGTATTACAATCAATC+AGG | 0.479197 | 2_1:-34365670 | Msa0206060:CDS |
| GGATTAGTCATGGTTTCTGC+TGG | 0.481615 | 2_1:-34363993 | Msa0206060:CDS |
| TCTAAGGCTGTATGTGCAGT+TGG | 0.485197 | 2_1:+34365832 | None:intergenic |
| TCTTGTAGGTCAACCAAGAA+TGG | 0.488416 | 2_1:+34364101 | None:intergenic |
| TATATTATCACCAGTGCTGT+TGG | 0.498006 | 2_1:-34365892 | Msa0206060:CDS |
| GCAATATTTCTGGCTTATGT+CGG | 0.507295 | 2_1:+34364052 | None:intergenic |
| AGCAAACCTTGTTACAAAGC+AGG | 0.508604 | 2_1:-34365774 | Msa0206060:CDS |
| ATTGTCCAGTGGAACTTCCC+CGG | 0.524347 | 2_1:+34365585 | None:intergenic |
| TGAAACCGGGGAAGTTCCAC+TGG | 0.528719 | 2_1:-34365590 | Msa0206060:CDS |
| CAGTGAGGCAATGTGAAACC+GGG | 0.530844 | 2_1:-34365603 | Msa0206060:CDS |
| TTATACATGTGAGATTTCTC+CGG | 0.540210 | 2_1:-34364219 | Msa0206060:CDS |
| GATCTACGTTGGATTAGTCA+TGG | 0.544297 | 2_1:-34364003 | Msa0206060:CDS |
| TAAATTTCTGTTAGTGACAT+CGG | 0.547064 | 2_1:+34365708 | None:intergenic |
| AGAAATTTACCACCTCAAGC+TGG | 0.549012 | 2_1:-34365694 | Msa0206060:CDS |
| GCAGGTATTTGTAAAACGCC+TGG | 0.557798 | 2_1:-34364197 | Msa0206060:CDS |
| ATAAATGACCCAAAGGATCA+TGG | 0.561857 | 2_1:+34363959 | None:intergenic |
| ACTGTGAGGTCAGGATGAAA+CGG | 0.562292 | 2_1:+34365622 | None:intergenic |
| ACATGTATCTCCAACAGCAC+TGG | 0.562342 | 2_1:+34365882 | None:intergenic |
| TCCATTTGGGAAGAAATAGT+CGG | 0.564868 | 2_1:+34364164 | None:intergenic |
| ACATGTGAGATTTCTCCGGC+AGG | 0.565573 | 2_1:-34364215 | Msa0206060:CDS |
| CTAAGGCTGTATGTGCAGTT+GGG | 0.575623 | 2_1:+34365833 | None:intergenic |
| TGAAACGGATTGCAGAGAAT+AGG | 0.579904 | 2_1:+34365637 | None:intergenic |
| GCAAACCTTGTTACAAAGCA+GGG | 0.580687 | 2_1:-34365773 | Msa0206060:CDS |
| TTATGTCGGTGAATGCTTGA+CGG | 0.582476 | 2_1:+34364066 | None:intergenic |
| GACTATTATGGCGCAAACCG+GGG | 0.590459 | 2_1:+34364030 | None:intergenic |
| ATAGTCGGGGTCATTCTACC+AGG | 0.593349 | 2_1:+34364179 | None:intergenic |
| AGACGAAATTCTTCCATGTG+TGG | 0.596145 | 2_1:-34365812 | Msa0206060:CDS |
| TAATACACAGGTCCAGCTTG+AGG | 0.604875 | 2_1:+34365682 | None:intergenic |
| AATAGTCGATGGATCTACGT+TGG | 0.605526 | 2_1:-34364014 | Msa0206060:CDS |
| CATGTGTTGCAATGGATGAG+TGG | 0.605557 | 2_1:-34365864 | Msa0206060:CDS |
| TGGAGATACATGTGTTGCAA+TGG | 0.617224 | 2_1:-34365872 | Msa0206060:CDS |
| GTTTGCGCCATAATAGTCGA+TGG | 0.619684 | 2_1:-34364025 | Msa0206060:CDS |
| CCTGATTGATTGTAATACAC+AGG | 0.619772 | 2_1:+34365670 | None:intergenic |
| GGGTCATTTATGCAAGAGAG+CGG | 0.623551 | 2_1:-34363947 | Msa0206060:CDS |
| ATGTGTTGCAATGGATGAGT+GGG | 0.627716 | 2_1:-34365863 | Msa0206060:CDS |
| CTCTTGCATAAATGACCCAA+AGG | 0.632426 | 2_1:+34363952 | None:intergenic |
| ATTGCAGAGAATAGGCATGA+GGG | 0.634382 | 2_1:+34365645 | None:intergenic |
| ATAAGCCAGAAATATTGCCC+CGG | 0.636898 | 2_1:-34364047 | Msa0206060:CDS |
| TCATTTATGCAAGAGAGCGG+CGG | 0.649319 | 2_1:-34363944 | Msa0206060:CDS |
| GATTGCAGAGAATAGGCATG+AGG | 0.650407 | 2_1:+34365644 | None:intergenic |
| TTTCACATTGCCTCACTGTG+AGG | 0.652053 | 2_1:+34365608 | None:intergenic |
| TCCACTGGACAATGCTACTG+AGG | 0.656648 | 2_1:-34365575 | Msa0206060:intron |
| TACACAGGTCCAGCTTGAGG+TGG | 0.664248 | 2_1:+34365685 | None:intergenic |
| TTGCAGAGAATAGGCATGAG+GGG | 0.668273 | 2_1:+34365646 | None:intergenic |
| ACCTCAGTAGCATTGTCCAG+TGG | 0.670734 | 2_1:+34365574 | None:intergenic |
| GCAGTTGCATTATCCACACA+TGG | 0.674260 | 2_1:+34365799 | None:intergenic |
| TTCATCCTGACCTCACAGTG+AGG | 0.695782 | 2_1:-34365618 | Msa0206060:CDS |
| AGTGAGGCAATGTGAAACCG+GGG | 0.707253 | 2_1:-34365602 | Msa0206060:CDS |
| CATTTGGGAAGAAATAGTCG+GGG | 0.714595 | 2_1:+34364166 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGATCAATTTTATAAAAAT+CGG | + | chr2_1:34365045-34365064 | None:intergenic | 10.0% |
| !!! | TAGATCAATTTTATAAAAAT+CGG | + | chr2_1:34365045-34365064 | None:intergenic | 10.0% |
| !!! | TTTTAGGTAATATAATATTC+AGG | - | chr2_1:34364263-34364282 | Msa0206060:intron | 15.0% |
| !!! | AATGTTTTTTTCTTTTTTGA+GGG | + | chr2_1:34364320-34364339 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTTTCTTTTTTG+AGG | + | chr2_1:34364321-34364340 | None:intergenic | 15.0% |
| !! | TCAAAATAATCTTAAACTAA+TGG | - | chr2_1:34365302-34365321 | Msa0206060:intron | 15.0% |
| !! | CAAAATAATCTTAAACTAAT+GGG | - | chr2_1:34365303-34365322 | Msa0206060:intron | 15.0% |
| !!! | TTTTAGGTAATATAATATTC+AGG | - | chr2_1:34364263-34364282 | Msa0206060:intron | 15.0% |
| !!! | AATGTTTTTTTCTTTTTTGA+GGG | + | chr2_1:34364320-34364339 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTTTCTTTTTTG+AGG | + | chr2_1:34364321-34364340 | None:intergenic | 15.0% |
| !! | TCAAAATAATCTTAAACTAA+TGG | - | chr2_1:34365302-34365321 | Msa0206060:intron | 15.0% |
| !! | CAAAATAATCTTAAACTAAT+GGG | - | chr2_1:34365303-34365322 | Msa0206060:intron | 15.0% |
| !!! | AAAAAAACATTTTTCTTGCT+TGG | - | chr2_1:34364329-34364348 | Msa0206060:intron | 20.0% |
| !!! | ATTTTTGATTGTGGAAAATT+GGG | - | chr2_1:34364457-34364476 | Msa0206060:intron | 20.0% |
| !!! | TGAAACCTTATTTGTATTAT+TGG | - | chr2_1:34364575-34364594 | Msa0206060:intron | 20.0% |
| !! | TACAACCAATAATACAAATA+AGG | + | chr2_1:34364583-34364602 | None:intergenic | 20.0% |
| !! | AAAAAGTCAAAAAAACAAGT+GGG | + | chr2_1:34364957-34364976 | None:intergenic | 20.0% |
| !! | TAAAAAGTCAAAAAAACAAG+TGG | + | chr2_1:34364958-34364977 | None:intergenic | 20.0% |
| !!! | AAAAAAACATTTTTCTTGCT+TGG | - | chr2_1:34364329-34364348 | Msa0206060:intron | 20.0% |
| !!! | ATTTTTGATTGTGGAAAATT+GGG | - | chr2_1:34364457-34364476 | Msa0206060:intron | 20.0% |
| !!! | TGAAACCTTATTTGTATTAT+TGG | - | chr2_1:34364575-34364594 | Msa0206060:intron | 20.0% |
| !! | TACAACCAATAATACAAATA+AGG | + | chr2_1:34364583-34364602 | None:intergenic | 20.0% |
| !! | AAAAAGTCAAAAAAACAAGT+GGG | + | chr2_1:34364957-34364976 | None:intergenic | 20.0% |
| !! | TAAAAAGTCAAAAAAACAAG+TGG | + | chr2_1:34364958-34364977 | None:intergenic | 20.0% |
| ! | TAAATTTCTGTTAGTGACAT+CGG | + | chr2_1:34364101-34364120 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTACAATCAGC+TGG | - | chr2_1:34364395-34364414 | Msa0206060:intron | 25.0% |
| !! | TTTTCCACAATCAAAAATCA+TGG | + | chr2_1:34364455-34364474 | None:intergenic | 25.0% |
| !!! | GATTTTTGATTGTGGAAAAT+TGG | - | chr2_1:34364456-34364475 | Msa0206060:intron | 25.0% |
| !!! | TTTTTGATTGTGGAAAATTG+GGG | - | chr2_1:34364458-34364477 | Msa0206060:intron | 25.0% |
| !! | GCATTTTAGACAGTAAAATA+AGG | + | chr2_1:34364538-34364557 | None:intergenic | 25.0% |
| ! | TGATGTATCTAGTCTATATT+AGG | - | chr2_1:34364785-34364804 | Msa0206060:intron | 25.0% |
| ! | GAGTATTAATGTTCAAAAAC+TGG | - | chr2_1:34364870-34364889 | Msa0206060:intron | 25.0% |
| !! | AGGACATGTTAAAATACTTT+TGG | + | chr2_1:34365117-34365136 | None:intergenic | 25.0% |
| ! | TTAGCATATTACAAGTCTAA+AGG | - | chr2_1:34365363-34365382 | Msa0206060:intron | 25.0% |
| !!! | TTTATGATTTGTTTTCAAGC+AGG | - | chr2_1:34365554-34365573 | Msa0206060:intron | 25.0% |
| ! | ATATCATTATGTTCCATTCT+TGG | - | chr2_1:34365692-34365711 | Msa0206060:CDS | 25.0% |
| ! | TAAATTTCTGTTAGTGACAT+CGG | + | chr2_1:34364101-34364120 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTACAATCAGC+TGG | - | chr2_1:34364395-34364414 | Msa0206060:intron | 25.0% |
| !! | TTTTCCACAATCAAAAATCA+TGG | + | chr2_1:34364455-34364474 | None:intergenic | 25.0% |
| !!! | GATTTTTGATTGTGGAAAAT+TGG | - | chr2_1:34364456-34364475 | Msa0206060:intron | 25.0% |
| !!! | TTTTTGATTGTGGAAAATTG+GGG | - | chr2_1:34364458-34364477 | Msa0206060:intron | 25.0% |
| !! | GCATTTTAGACAGTAAAATA+AGG | + | chr2_1:34364538-34364557 | None:intergenic | 25.0% |
| ! | TGATGTATCTAGTCTATATT+AGG | - | chr2_1:34364785-34364804 | Msa0206060:intron | 25.0% |
| ! | GAGTATTAATGTTCAAAAAC+TGG | - | chr2_1:34364870-34364889 | Msa0206060:intron | 25.0% |
| !! | AGGACATGTTAAAATACTTT+TGG | + | chr2_1:34365117-34365136 | None:intergenic | 25.0% |
| ! | TTAGCATATTACAAGTCTAA+AGG | - | chr2_1:34365363-34365382 | Msa0206060:intron | 25.0% |
| !!! | TTTATGATTTGTTTTCAAGC+AGG | - | chr2_1:34365554-34365573 | Msa0206060:intron | 25.0% |
| ! | ATATCATTATGTTCCATTCT+TGG | - | chr2_1:34365692-34365711 | Msa0206060:CDS | 25.0% |
| CTTTCTCTTATAATAGAGAC+CGG | + | chr2_1:34364848-34364867 | None:intergenic | 30.0% | |
| CTTTCTCTTATAATAGAGAC+TGG | - | chr2_1:34364848-34364867 | Msa0206060:intron | 30.0% | |
| CATGGTTCAAATAGTTCAAT+CGG | + | chr2_1:34365005-34365024 | None:intergenic | 30.0% | |
| ! | CATGTTAAAATACTTTTGGC+TGG | + | chr2_1:34365113-34365132 | None:intergenic | 30.0% |
| AATGGAAGGATTAAATTTGC+AGG | - | chr2_1:34365265-34365284 | Msa0206060:intron | 30.0% | |
| AAATTTGCAGGAAAGAATCT+AGG | - | chr2_1:34365277-34365296 | Msa0206060:intron | 30.0% | |
| ! | TTTTTATACTGCTCCTATCA+TGG | - | chr2_1:34365337-34365356 | Msa0206060:intron | 30.0% |
| AATATGCTAACTACCATGAT+AGG | + | chr2_1:34365353-34365372 | None:intergenic | 30.0% | |
| TGTTACACACATGTTATATC+AGG | + | chr2_1:34365534-34365553 | None:intergenic | 30.0% | |
| TTATACATGTGAGATTTCTC+CGG | - | chr2_1:34365587-34365606 | Msa0206060:CDS | 30.0% | |
| CTTTCTCTTATAATAGAGAC+CGG | + | chr2_1:34364848-34364867 | None:intergenic | 30.0% | |
| CTTTCTCTTATAATAGAGAC+TGG | - | chr2_1:34364848-34364867 | Msa0206060:intron | 30.0% | |
| CATGGTTCAAATAGTTCAAT+CGG | + | chr2_1:34365005-34365024 | None:intergenic | 30.0% | |
| ! | CATGTTAAAATACTTTTGGC+TGG | + | chr2_1:34365113-34365132 | None:intergenic | 30.0% |
| AATGGAAGGATTAAATTTGC+AGG | - | chr2_1:34365265-34365284 | Msa0206060:intron | 30.0% | |
| AAATTTGCAGGAAAGAATCT+AGG | - | chr2_1:34365277-34365296 | Msa0206060:intron | 30.0% | |
| ! | TTTTTATACTGCTCCTATCA+TGG | - | chr2_1:34365337-34365356 | Msa0206060:intron | 30.0% |
| AATATGCTAACTACCATGAT+AGG | + | chr2_1:34365353-34365372 | None:intergenic | 30.0% | |
| TGTTACACACATGTTATATC+AGG | + | chr2_1:34365534-34365553 | None:intergenic | 30.0% | |
| TTATACATGTGAGATTTCTC+CGG | - | chr2_1:34365587-34365606 | Msa0206060:CDS | 30.0% | |
| TATATTATCACCAGTGCTGT+TGG | - | chr2_1:34363914-34363933 | Msa0206060:CDS | 35.0% | |
| ACATGGAAGAATTTCGTCTA+AGG | + | chr2_1:34363993-34364012 | None:intergenic | 35.0% | |
| CCTGATTGATTGTAATACAC+AGG | + | chr2_1:34364139-34364158 | None:intergenic | 35.0% | |
| CCTGTGTATTACAATCAATC+AGG | - | chr2_1:34364136-34364155 | Msa0206060:CDS | 35.0% | |
| !! | ACTGAGGTAAGACACTTTTT+AGG | - | chr2_1:34364247-34364266 | Msa0206060:intron | 35.0% |
| !! | TTTTGTTTACAATCAGCTGG+TGG | - | chr2_1:34364398-34364417 | Msa0206060:intron | 35.0% |
| TTTGTTTACAATCAGCTGGT+GGG | - | chr2_1:34364399-34364418 | Msa0206060:intron | 35.0% | |
| !! | TGTGCCATGATTTTTGATTG+TGG | - | chr2_1:34364448-34364467 | Msa0206060:intron | 35.0% |
| ACAACATGACTACACAATTG+AGG | + | chr2_1:34364494-34364513 | None:intergenic | 35.0% | |
| TCAATTGTGTAGTCATGTTG+TGG | - | chr2_1:34364493-34364512 | Msa0206060:intron | 35.0% | |
| TTTCAAAAACAGACGTAGGA+AGG | + | chr2_1:34364560-34364579 | None:intergenic | 35.0% | |
| AAGGTTTCAAAAACAGACGT+AGG | + | chr2_1:34364564-34364583 | None:intergenic | 35.0% | |
| !! | GTTAAAATACTTTTGGCTGG+TGG | + | chr2_1:34365110-34365129 | None:intergenic | 35.0% |
| TTAACATGTCCTTAACCAAG+CGG | - | chr2_1:34365125-34365144 | Msa0206060:intron | 35.0% | |
| GAGCATTTAGAAAAGTTGAG+TGG | + | chr2_1:34365193-34365212 | None:intergenic | 35.0% | |
| ! | CTCAACTTTTCTAAATGCTC+AGG | - | chr2_1:34365193-34365212 | Msa0206060:intron | 35.0% |
| TGCACGAATGGTACAAATAA+TGG | - | chr2_1:34365247-34365266 | Msa0206060:intron | 35.0% | |
| ! | CGAATGGTACAAATAATGGA+AGG | - | chr2_1:34365251-34365270 | Msa0206060:intron | 35.0% |
| ! | TGCTTTTAATGAGATCACGT+GGG | + | chr2_1:34365397-34365416 | None:intergenic | 35.0% |
| ! | ATGCTTTTAATGAGATCACG+TGG | + | chr2_1:34365398-34365417 | None:intergenic | 35.0% |
| !! | GATTTGTTTTCAAGCAGGTT+TGG | - | chr2_1:34365559-34365578 | Msa0206060:intron | 35.0% |
| TCCATTTGGGAAGAAATAGT+CGG | + | chr2_1:34365645-34365664 | None:intergenic | 35.0% | |
| !! | GCAATATTTCTGGCTTATGT+CGG | + | chr2_1:34365757-34365776 | None:intergenic | 35.0% |
| ATAAATGACCCAAAGGATCA+TGG | + | chr2_1:34365850-34365869 | None:intergenic | 35.0% | |
| TACACTAAACAGTTCATTGC+TGG | - | chr2_1:34365894-34365913 | Msa0206060:CDS | 35.0% | |
| TATATTATCACCAGTGCTGT+TGG | - | chr2_1:34363914-34363933 | Msa0206060:CDS | 35.0% | |
| ACATGGAAGAATTTCGTCTA+AGG | + | chr2_1:34363993-34364012 | None:intergenic | 35.0% | |
| CCTGATTGATTGTAATACAC+AGG | + | chr2_1:34364139-34364158 | None:intergenic | 35.0% | |
| CCTGTGTATTACAATCAATC+AGG | - | chr2_1:34364136-34364155 | Msa0206060:CDS | 35.0% | |
| !! | ACTGAGGTAAGACACTTTTT+AGG | - | chr2_1:34364247-34364266 | Msa0206060:intron | 35.0% |
| !! | TTTTGTTTACAATCAGCTGG+TGG | - | chr2_1:34364398-34364417 | Msa0206060:intron | 35.0% |
| TTTGTTTACAATCAGCTGGT+GGG | - | chr2_1:34364399-34364418 | Msa0206060:intron | 35.0% | |
| !! | TGTGCCATGATTTTTGATTG+TGG | - | chr2_1:34364448-34364467 | Msa0206060:intron | 35.0% |
| ACAACATGACTACACAATTG+AGG | + | chr2_1:34364494-34364513 | None:intergenic | 35.0% | |
| TCAATTGTGTAGTCATGTTG+TGG | - | chr2_1:34364493-34364512 | Msa0206060:intron | 35.0% | |
| TTTCAAAAACAGACGTAGGA+AGG | + | chr2_1:34364560-34364579 | None:intergenic | 35.0% | |
| AAGGTTTCAAAAACAGACGT+AGG | + | chr2_1:34364564-34364583 | None:intergenic | 35.0% | |
| !! | GTTAAAATACTTTTGGCTGG+TGG | + | chr2_1:34365110-34365129 | None:intergenic | 35.0% |
| TTAACATGTCCTTAACCAAG+CGG | - | chr2_1:34365125-34365144 | Msa0206060:intron | 35.0% | |
| GAGCATTTAGAAAAGTTGAG+TGG | + | chr2_1:34365193-34365212 | None:intergenic | 35.0% | |
| ! | CTCAACTTTTCTAAATGCTC+AGG | - | chr2_1:34365193-34365212 | Msa0206060:intron | 35.0% |
| TGCACGAATGGTACAAATAA+TGG | - | chr2_1:34365247-34365266 | Msa0206060:intron | 35.0% | |
| ! | CGAATGGTACAAATAATGGA+AGG | - | chr2_1:34365251-34365270 | Msa0206060:intron | 35.0% |
| ! | TGCTTTTAATGAGATCACGT+GGG | + | chr2_1:34365397-34365416 | None:intergenic | 35.0% |
| ! | ATGCTTTTAATGAGATCACG+TGG | + | chr2_1:34365398-34365417 | None:intergenic | 35.0% |
| !! | GATTTGTTTTCAAGCAGGTT+TGG | - | chr2_1:34365559-34365578 | Msa0206060:intron | 35.0% |
| TCCATTTGGGAAGAAATAGT+CGG | + | chr2_1:34365645-34365664 | None:intergenic | 35.0% | |
| !! | GCAATATTTCTGGCTTATGT+CGG | + | chr2_1:34365757-34365776 | None:intergenic | 35.0% |
| ATAAATGACCCAAAGGATCA+TGG | + | chr2_1:34365850-34365869 | None:intergenic | 35.0% | |
| TACACTAAACAGTTCATTGC+TGG | - | chr2_1:34365894-34365913 | Msa0206060:CDS | 35.0% | |
| TGGAGATACATGTGTTGCAA+TGG | - | chr2_1:34363934-34363953 | Msa0206060:CDS | 40.0% | |
| ATGTGTTGCAATGGATGAGT+GGG | - | chr2_1:34363943-34363962 | Msa0206060:CDS | 40.0% | |
| AGACGAAATTCTTCCATGTG+TGG | - | chr2_1:34363994-34364013 | Msa0206060:CDS | 40.0% | |
| AGCAAACCTTGTTACAAAGC+AGG | - | chr2_1:34364032-34364051 | Msa0206060:CDS | 40.0% | |
| GCAAACCTTGTTACAAAGCA+GGG | - | chr2_1:34364033-34364052 | Msa0206060:CDS | 40.0% | |
| AGAAATTTACCACCTCAAGC+TGG | - | chr2_1:34364112-34364131 | Msa0206060:CDS | 40.0% | |
| ATTGCAGAGAATAGGCATGA+GGG | + | chr2_1:34364164-34364183 | None:intergenic | 40.0% | |
| !! | TGAAACGGATTGCAGAGAAT+AGG | + | chr2_1:34364172-34364191 | None:intergenic | 40.0% |
| CTCTTATAATAGAGACCGGA+GGG | + | chr2_1:34364735-34364754 | None:intergenic | 40.0% | |
| TCTCTTATAATAGAGACCGG+AGG | + | chr2_1:34364736-34364755 | None:intergenic | 40.0% | |
| ! | GTTCAAAAACTGGACTAGAC+CGG | - | chr2_1:34364880-34364899 | Msa0206060:intron | 40.0% |
| CTGCAAAACTGACAGATTCT+TGG | + | chr2_1:34364924-34364943 | None:intergenic | 40.0% | |
| ! | GAATCTGTCAGTTTTGCAGT+TGG | - | chr2_1:34364925-34364944 | Msa0206060:intron | 40.0% |
| ! | AAATCGGACTAGAGACAATC+TGG | + | chr2_1:34365029-34365048 | None:intergenic | 40.0% |
| GGTTCACATTCATGTAGTCT+GGG | + | chr2_1:34365089-34365108 | None:intergenic | 40.0% | |
| TGGTTCACATTCATGTAGTC+TGG | + | chr2_1:34365090-34365109 | None:intergenic | 40.0% | |
| GTTTAATGACCGCTTGGTTA+AGG | + | chr2_1:34365137-34365156 | None:intergenic | 40.0% | |
| TGGCAGTTCAACTTCAACTT+GGG | + | chr2_1:34365173-34365192 | None:intergenic | 40.0% | |
| AATGCTCAGGAAGATCAAGT+TGG | - | chr2_1:34365206-34365225 | Msa0206060:intron | 40.0% | |
| AGATTGAAAGACTGCACGAA+TGG | - | chr2_1:34365235-34365254 | Msa0206060:intron | 40.0% | |
| !! | TTGTTTTCAAGCAGGTTTGG+AGG | - | chr2_1:34365562-34365581 | Msa0206060:intron | 40.0% |
| CATTTGGGAAGAAATAGTCG+GGG | + | chr2_1:34365643-34365662 | None:intergenic | 40.0% | |
| CCATTTGGGAAGAAATAGTC+GGG | + | chr2_1:34365644-34365663 | None:intergenic | 40.0% | |
| ATTCACAGCAGCTTCCATTT+GGG | + | chr2_1:34365658-34365677 | None:intergenic | 40.0% | |
| TCTTGTAGGTCAACCAAGAA+TGG | + | chr2_1:34365708-34365727 | None:intergenic | 40.0% | |
| TTATGTCGGTGAATGCTTGA+CGG | + | chr2_1:34365743-34365762 | None:intergenic | 40.0% | |
| ATAAGCCAGAAATATTGCCC+CGG | - | chr2_1:34365759-34365778 | Msa0206060:CDS | 40.0% | |
| ! | CGTAGATCCATCGACTATTA+TGG | + | chr2_1:34365791-34365810 | None:intergenic | 40.0% |
| AATAGTCGATGGATCTACGT+TGG | - | chr2_1:34365792-34365811 | Msa0206060:CDS | 40.0% | |
| !! | GATCTACGTTGGATTAGTCA+TGG | - | chr2_1:34365803-34365822 | Msa0206060:CDS | 40.0% |
| TAATGCTGTCCATGATCCTT+TGG | - | chr2_1:34365838-34365857 | Msa0206060:CDS | 40.0% | |
| AATGCTGTCCATGATCCTTT+GGG | - | chr2_1:34365839-34365858 | Msa0206060:CDS | 40.0% | |
| CTCTTGCATAAATGACCCAA+AGG | + | chr2_1:34365857-34365876 | None:intergenic | 40.0% | |
| TGGAGATACATGTGTTGCAA+TGG | - | chr2_1:34363934-34363953 | Msa0206060:CDS | 40.0% | |
| ATGTGTTGCAATGGATGAGT+GGG | - | chr2_1:34363943-34363962 | Msa0206060:CDS | 40.0% | |
| AGACGAAATTCTTCCATGTG+TGG | - | chr2_1:34363994-34364013 | Msa0206060:CDS | 40.0% | |
| AGCAAACCTTGTTACAAAGC+AGG | - | chr2_1:34364032-34364051 | Msa0206060:CDS | 40.0% | |
| GCAAACCTTGTTACAAAGCA+GGG | - | chr2_1:34364033-34364052 | Msa0206060:CDS | 40.0% | |
| AGAAATTTACCACCTCAAGC+TGG | - | chr2_1:34364112-34364131 | Msa0206060:CDS | 40.0% | |
| ATTGCAGAGAATAGGCATGA+GGG | + | chr2_1:34364164-34364183 | None:intergenic | 40.0% | |
| !! | TGAAACGGATTGCAGAGAAT+AGG | + | chr2_1:34364172-34364191 | None:intergenic | 40.0% |
| CTCTTATAATAGAGACCGGA+GGG | + | chr2_1:34364735-34364754 | None:intergenic | 40.0% | |
| TCTCTTATAATAGAGACCGG+AGG | + | chr2_1:34364736-34364755 | None:intergenic | 40.0% | |
| ! | GTTCAAAAACTGGACTAGAC+CGG | - | chr2_1:34364880-34364899 | Msa0206060:intron | 40.0% |
| CTGCAAAACTGACAGATTCT+TGG | + | chr2_1:34364924-34364943 | None:intergenic | 40.0% | |
| ! | GAATCTGTCAGTTTTGCAGT+TGG | - | chr2_1:34364925-34364944 | Msa0206060:intron | 40.0% |
| ! | AAATCGGACTAGAGACAATC+TGG | + | chr2_1:34365029-34365048 | None:intergenic | 40.0% |
| GGTTCACATTCATGTAGTCT+GGG | + | chr2_1:34365089-34365108 | None:intergenic | 40.0% | |
| TGGTTCACATTCATGTAGTC+TGG | + | chr2_1:34365090-34365109 | None:intergenic | 40.0% | |
| GTTTAATGACCGCTTGGTTA+AGG | + | chr2_1:34365137-34365156 | None:intergenic | 40.0% | |
| TGGCAGTTCAACTTCAACTT+GGG | + | chr2_1:34365173-34365192 | None:intergenic | 40.0% | |
| AATGCTCAGGAAGATCAAGT+TGG | - | chr2_1:34365206-34365225 | Msa0206060:intron | 40.0% | |
| AGATTGAAAGACTGCACGAA+TGG | - | chr2_1:34365235-34365254 | Msa0206060:intron | 40.0% | |
| !! | TTGTTTTCAAGCAGGTTTGG+AGG | - | chr2_1:34365562-34365581 | Msa0206060:intron | 40.0% |
| CATTTGGGAAGAAATAGTCG+GGG | + | chr2_1:34365643-34365662 | None:intergenic | 40.0% | |
| CCATTTGGGAAGAAATAGTC+GGG | + | chr2_1:34365644-34365663 | None:intergenic | 40.0% | |
| ATTCACAGCAGCTTCCATTT+GGG | + | chr2_1:34365658-34365677 | None:intergenic | 40.0% | |
| TCTTGTAGGTCAACCAAGAA+TGG | + | chr2_1:34365708-34365727 | None:intergenic | 40.0% | |
| TTATGTCGGTGAATGCTTGA+CGG | + | chr2_1:34365743-34365762 | None:intergenic | 40.0% | |
| ATAAGCCAGAAATATTGCCC+CGG | - | chr2_1:34365759-34365778 | Msa0206060:CDS | 40.0% | |
| ! | CGTAGATCCATCGACTATTA+TGG | + | chr2_1:34365791-34365810 | None:intergenic | 40.0% |
| AATAGTCGATGGATCTACGT+TGG | - | chr2_1:34365792-34365811 | Msa0206060:CDS | 40.0% | |
| !! | GATCTACGTTGGATTAGTCA+TGG | - | chr2_1:34365803-34365822 | Msa0206060:CDS | 40.0% |
| TAATGCTGTCCATGATCCTT+TGG | - | chr2_1:34365838-34365857 | Msa0206060:CDS | 40.0% | |
| AATGCTGTCCATGATCCTTT+GGG | - | chr2_1:34365839-34365858 | Msa0206060:CDS | 40.0% | |
| CTCTTGCATAAATGACCCAA+AGG | + | chr2_1:34365857-34365876 | None:intergenic | 40.0% | |
| ACATGTATCTCCAACAGCAC+TGG | + | chr2_1:34363927-34363946 | None:intergenic | 45.0% | |
| CATGTGTTGCAATGGATGAG+TGG | - | chr2_1:34363942-34363961 | Msa0206060:CDS | 45.0% | |
| CTAAGGCTGTATGTGCAGTT+GGG | + | chr2_1:34363976-34363995 | None:intergenic | 45.0% | |
| ! | TCTAAGGCTGTATGTGCAGT+TGG | + | chr2_1:34363977-34363996 | None:intergenic | 45.0% |
| GCAGTTGCATTATCCACACA+TGG | + | chr2_1:34364010-34364029 | None:intergenic | 45.0% | |
| CACATCCCTGCTTTGTAACA+AGG | + | chr2_1:34364041-34364060 | None:intergenic | 45.0% | |
| GACGCGTCAGCTAGTTATAT+TGG | - | chr2_1:34364060-34364079 | Msa0206060:CDS | 45.0% | |
| TAATACACAGGTCCAGCTTG+AGG | + | chr2_1:34364127-34364146 | None:intergenic | 45.0% | |
| TTGCAGAGAATAGGCATGAG+GGG | + | chr2_1:34364163-34364182 | None:intergenic | 45.0% | |
| GATTGCAGAGAATAGGCATG+AGG | + | chr2_1:34364165-34364184 | None:intergenic | 45.0% | |
| ACTGTGAGGTCAGGATGAAA+CGG | + | chr2_1:34364187-34364206 | None:intergenic | 45.0% | |
| TTTCACATTGCCTCACTGTG+AGG | + | chr2_1:34364201-34364220 | None:intergenic | 45.0% | |
| ACAGTGAGGCAATGTGAAAC+CGG | - | chr2_1:34364202-34364221 | Msa0206060:CDS | 45.0% | |
| ACAATCAGCTGGTGGGAATA+TGG | - | chr2_1:34364406-34364425 | Msa0206060:intron | 45.0% | |
| GTGTAGTCATGTTGTGGTCA+CGG | - | chr2_1:34364499-34364518 | Msa0206060:intron | 45.0% | |
| ! | AGTATCTAGAGTACTCCCTC+CGG | - | chr2_1:34364717-34364736 | Msa0206060:intron | 45.0% |
| CTTGGTTCAACCAGTCGAAT+TGG | + | chr2_1:34364906-34364925 | None:intergenic | 45.0% | |
| ! | TAGTTCAATCGGTTCAGCTG+TGG | + | chr2_1:34364994-34365013 | None:intergenic | 45.0% |
| GACTAGAGACAATCTGGTCA+TGG | + | chr2_1:34365023-34365042 | None:intergenic | 45.0% | |
| ATGGTGGTTTAATGACCGCT+TGG | + | chr2_1:34365143-34365162 | None:intergenic | 45.0% | |
| TCAACTTCAACTTGGGCTAC+TGG | + | chr2_1:34365166-34365185 | None:intergenic | 45.0% | |
| GTGGCAGTTCAACTTCAACT+TGG | + | chr2_1:34365174-34365193 | None:intergenic | 45.0% | |
| GCATGCAGCAGTTTGAATCA+AGG | + | chr2_1:34365510-34365529 | None:intergenic | 45.0% | |
| ! | GGCGTTTTACAAATACCTGC+CGG | + | chr2_1:34365609-34365628 | None:intergenic | 45.0% |
| GCAGGTATTTGTAAAACGCC+TGG | - | chr2_1:34365609-34365628 | Msa0206060:CDS | 45.0% | |
| ! | CCCGACTATTTCTTCCCAAA+TGG | - | chr2_1:34365641-34365660 | Msa0206060:CDS | 45.0% |
| CATTCACAGCAGCTTCCATT+TGG | + | chr2_1:34365659-34365678 | None:intergenic | 45.0% | |
| ! | GGACAAAAGTGCAGTCTTGT+AGG | + | chr2_1:34365722-34365741 | None:intergenic | 45.0% |
| TCGACTATTATGGCGCAAAC+CGG | + | chr2_1:34365781-34365800 | None:intergenic | 45.0% | |
| GTTTGCGCCATAATAGTCGA+TGG | - | chr2_1:34365781-34365800 | Msa0206060:CDS | 45.0% | |
| !! | GGATTAGTCATGGTTTCTGC+TGG | - | chr2_1:34365813-34365832 | Msa0206060:CDS | 45.0% |
| GGGTCATTTATGCAAGAGAG+CGG | - | chr2_1:34365859-34365878 | Msa0206060:CDS | 45.0% | |
| TCATTTATGCAAGAGAGCGG+CGG | - | chr2_1:34365862-34365881 | Msa0206060:CDS | 45.0% | |
| ACATGTATCTCCAACAGCAC+TGG | + | chr2_1:34363927-34363946 | None:intergenic | 45.0% | |
| CATGTGTTGCAATGGATGAG+TGG | - | chr2_1:34363942-34363961 | Msa0206060:CDS | 45.0% | |
| CTAAGGCTGTATGTGCAGTT+GGG | + | chr2_1:34363976-34363995 | None:intergenic | 45.0% | |
| ! | TCTAAGGCTGTATGTGCAGT+TGG | + | chr2_1:34363977-34363996 | None:intergenic | 45.0% |
| GCAGTTGCATTATCCACACA+TGG | + | chr2_1:34364010-34364029 | None:intergenic | 45.0% | |
| CACATCCCTGCTTTGTAACA+AGG | + | chr2_1:34364041-34364060 | None:intergenic | 45.0% | |
| GACGCGTCAGCTAGTTATAT+TGG | - | chr2_1:34364060-34364079 | Msa0206060:CDS | 45.0% | |
| TAATACACAGGTCCAGCTTG+AGG | + | chr2_1:34364127-34364146 | None:intergenic | 45.0% | |
| TTGCAGAGAATAGGCATGAG+GGG | + | chr2_1:34364163-34364182 | None:intergenic | 45.0% | |
| GATTGCAGAGAATAGGCATG+AGG | + | chr2_1:34364165-34364184 | None:intergenic | 45.0% | |
| ACTGTGAGGTCAGGATGAAA+CGG | + | chr2_1:34364187-34364206 | None:intergenic | 45.0% | |
| TTTCACATTGCCTCACTGTG+AGG | + | chr2_1:34364201-34364220 | None:intergenic | 45.0% | |
| ACAGTGAGGCAATGTGAAAC+CGG | - | chr2_1:34364202-34364221 | Msa0206060:CDS | 45.0% | |
| ACAATCAGCTGGTGGGAATA+TGG | - | chr2_1:34364406-34364425 | Msa0206060:intron | 45.0% | |
| GTGTAGTCATGTTGTGGTCA+CGG | - | chr2_1:34364499-34364518 | Msa0206060:intron | 45.0% | |
| ! | AGTATCTAGAGTACTCCCTC+CGG | - | chr2_1:34364717-34364736 | Msa0206060:intron | 45.0% |
| CTTGGTTCAACCAGTCGAAT+TGG | + | chr2_1:34364906-34364925 | None:intergenic | 45.0% | |
| ! | TAGTTCAATCGGTTCAGCTG+TGG | + | chr2_1:34364994-34365013 | None:intergenic | 45.0% |
| GACTAGAGACAATCTGGTCA+TGG | + | chr2_1:34365023-34365042 | None:intergenic | 45.0% | |
| ATGGTGGTTTAATGACCGCT+TGG | + | chr2_1:34365143-34365162 | None:intergenic | 45.0% | |
| TCAACTTCAACTTGGGCTAC+TGG | + | chr2_1:34365166-34365185 | None:intergenic | 45.0% | |
| GTGGCAGTTCAACTTCAACT+TGG | + | chr2_1:34365174-34365193 | None:intergenic | 45.0% | |
| GCATGCAGCAGTTTGAATCA+AGG | + | chr2_1:34365510-34365529 | None:intergenic | 45.0% | |
| ! | GGCGTTTTACAAATACCTGC+CGG | + | chr2_1:34365609-34365628 | None:intergenic | 45.0% |
| GCAGGTATTTGTAAAACGCC+TGG | - | chr2_1:34365609-34365628 | Msa0206060:CDS | 45.0% | |
| ! | CCCGACTATTTCTTCCCAAA+TGG | - | chr2_1:34365641-34365660 | Msa0206060:CDS | 45.0% |
| CATTCACAGCAGCTTCCATT+TGG | + | chr2_1:34365659-34365678 | None:intergenic | 45.0% | |
| ! | GGACAAAAGTGCAGTCTTGT+AGG | + | chr2_1:34365722-34365741 | None:intergenic | 45.0% |
| TCGACTATTATGGCGCAAAC+CGG | + | chr2_1:34365781-34365800 | None:intergenic | 45.0% | |
| GTTTGCGCCATAATAGTCGA+TGG | - | chr2_1:34365781-34365800 | Msa0206060:CDS | 45.0% | |
| !! | GGATTAGTCATGGTTTCTGC+TGG | - | chr2_1:34365813-34365832 | Msa0206060:CDS | 45.0% |
| GGGTCATTTATGCAAGAGAG+CGG | - | chr2_1:34365859-34365878 | Msa0206060:CDS | 45.0% | |
| TCATTTATGCAAGAGAGCGG+CGG | - | chr2_1:34365862-34365881 | Msa0206060:CDS | 45.0% | |
| TTCATCCTGACCTCACAGTG+AGG | - | chr2_1:34364188-34364207 | Msa0206060:CDS | 50.0% | |
| CAGTGAGGCAATGTGAAACC+GGG | - | chr2_1:34364203-34364222 | Msa0206060:CDS | 50.0% | |
| AGTGAGGCAATGTGAAACCG+GGG | - | chr2_1:34364204-34364223 | Msa0206060:CDS | 50.0% | |
| ATTGTCCAGTGGAACTTCCC+CGG | + | chr2_1:34364224-34364243 | None:intergenic | 50.0% | |
| TCCACTGGACAATGCTACTG+AGG | - | chr2_1:34364231-34364250 | Msa0206060:CDS | 50.0% | |
| ACCTCAGTAGCATTGTCCAG+TGG | + | chr2_1:34364235-34364254 | None:intergenic | 50.0% | |
| GTTCAACCAGTCGAATTGGC+CGG | + | chr2_1:34364902-34364921 | None:intergenic | 50.0% | |
| CTTCAACTTGGGCTACTGGA+TGG | + | chr2_1:34365162-34365181 | None:intergenic | 50.0% | |
| ACATGTGAGATTTCTCCGGC+AGG | - | chr2_1:34365591-34365610 | Msa0206060:CDS | 50.0% | |
| ATAGTCGGGGTCATTCTACC+AGG | + | chr2_1:34365630-34365649 | None:intergenic | 50.0% | |
| GCAAACCGGGGCAATATTTC+TGG | + | chr2_1:34365767-34365786 | None:intergenic | 50.0% | |
| GACTATTATGGCGCAAACCG+GGG | + | chr2_1:34365779-34365798 | None:intergenic | 50.0% | |
| CGACTATTATGGCGCAAACC+GGG | + | chr2_1:34365780-34365799 | None:intergenic | 50.0% | |
| TTCATCCTGACCTCACAGTG+AGG | - | chr2_1:34364188-34364207 | Msa0206060:CDS | 50.0% | |
| CAGTGAGGCAATGTGAAACC+GGG | - | chr2_1:34364203-34364222 | Msa0206060:CDS | 50.0% | |
| AGTGAGGCAATGTGAAACCG+GGG | - | chr2_1:34364204-34364223 | Msa0206060:CDS | 50.0% | |
| ATTGTCCAGTGGAACTTCCC+CGG | + | chr2_1:34364224-34364243 | None:intergenic | 50.0% | |
| TCCACTGGACAATGCTACTG+AGG | - | chr2_1:34364231-34364250 | Msa0206060:CDS | 50.0% | |
| ACCTCAGTAGCATTGTCCAG+TGG | + | chr2_1:34364235-34364254 | None:intergenic | 50.0% | |
| GTTCAACCAGTCGAATTGGC+CGG | + | chr2_1:34364902-34364921 | None:intergenic | 50.0% | |
| CTTCAACTTGGGCTACTGGA+TGG | + | chr2_1:34365162-34365181 | None:intergenic | 50.0% | |
| ACATGTGAGATTTCTCCGGC+AGG | - | chr2_1:34365591-34365610 | Msa0206060:CDS | 50.0% | |
| ATAGTCGGGGTCATTCTACC+AGG | + | chr2_1:34365630-34365649 | None:intergenic | 50.0% | |
| GCAAACCGGGGCAATATTTC+TGG | + | chr2_1:34365767-34365786 | None:intergenic | 50.0% | |
| GACTATTATGGCGCAAACCG+GGG | + | chr2_1:34365779-34365798 | None:intergenic | 50.0% | |
| CGACTATTATGGCGCAAACC+GGG | + | chr2_1:34365780-34365799 | None:intergenic | 50.0% | |
| TACACAGGTCCAGCTTGAGG+TGG | + | chr2_1:34364124-34364143 | None:intergenic | 55.0% | |
| CATTGCCTCACTGTGAGGTC+AGG | + | chr2_1:34364196-34364215 | None:intergenic | 55.0% | |
| TGAAACCGGGGAAGTTCCAC+TGG | - | chr2_1:34364216-34364235 | Msa0206060:CDS | 55.0% | |
| ACTAGACCGGCCAATTCGAC+TGG | - | chr2_1:34364893-34364912 | Msa0206060:intron | 55.0% | |
| CAACTTGGGCTACTGGATGG+TGG | + | chr2_1:34365159-34365178 | None:intergenic | 55.0% | |
| TACACAGGTCCAGCTTGAGG+TGG | + | chr2_1:34364124-34364143 | None:intergenic | 55.0% | |
| CATTGCCTCACTGTGAGGTC+AGG | + | chr2_1:34364196-34364215 | None:intergenic | 55.0% | |
| TGAAACCGGGGAAGTTCCAC+TGG | - | chr2_1:34364216-34364235 | Msa0206060:CDS | 55.0% | |
| ACTAGACCGGCCAATTCGAC+TGG | - | chr2_1:34364893-34364912 | Msa0206060:intron | 55.0% | |
| CAACTTGGGCTACTGGATGG+TGG | + | chr2_1:34365159-34365178 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 34363908 | 34365920 | 34363908 | ID=Msa0206060;Name=Msa0206060 |
| chr2_1 | mRNA | 34363908 | 34365920 | 34363908 | ID=Msa0206060-mRNA-1;Parent=Msa0206060;Name=Msa0206060-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|229 |
| chr2_1 | exon | 34365576 | 34365920 | 34365576 | ID=Msa0206060-mRNA-1:exon:11577;Parent=Msa0206060-mRNA-1 |
| chr2_1 | exon | 34363908 | 34364252 | 34363908 | ID=Msa0206060-mRNA-1:exon:11576;Parent=Msa0206060-mRNA-1 |
| chr2_1 | CDS | 34365576 | 34365920 | 34365576 | ID=Msa0206060-mRNA-1:cds;Parent=Msa0206060-mRNA-1 |
| chr2_1 | CDS | 34363908 | 34364252 | 34363908 | ID=Msa0206060-mRNA-1:cds;Parent=Msa0206060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
