AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083970 MtrunA17_Chr7g0274241 96.522 460 13 1 20 476 1 460 0.0 903
Msa1083970 MtrunA17_Chr5g0398901 41.905 105 58 1 354 455 2 106 4.55e-17 84.0
Msa1083970 MtrunA17_Chr5g0398901 34.211 114 72 1 354 464 392 505 2.43e-15 78.6
Msa1083970 MtrunA17_Chr4g0010051 25.401 374 234 12 37 400 22 360 2.43e-16 81.3
Msa1083970 MtrunA17_Chr4g0064931 31.532 222 147 3 68 284 30 251 3.50e-16 81.3
Msa1083970 MtrunA17_Chr1g0211241 30.078 256 166 7 32 279 96 346 9.29e-15 77.0
Msa1083970 MtrunA17_Chr2g0328031 27.660 282 170 7 28 302 5 259 1.75e-14 75.5
Msa1083970 MtrunA17_Chr5g0418551 31.214 173 114 3 104 271 50 222 1.49e-13 70.5
Msa1083970 MtrunA17_Chr5g0418551 30.872 149 99 3 65 210 79 226 3.67e-11 63.5
Msa1083970 MtrunA17_Chr2g0277651 32.704 159 100 3 133 290 533 685 3.63e-13 72.0
Msa1083970 MtrunA17_Chr1g0166441 34.579 107 67 1 358 461 15 121 1.06e-12 68.9
Msa1083970 MtrunA17_Chr3g0138141 29.557 203 137 4 148 347 108 307 1.19e-12 69.7
Msa1083970 MtrunA17_Chr4g0031491 27.798 277 163 8 78 348 51 296 1.95e-12 68.9
Msa1083970 MtrunA17_Chr5g0434371 30.337 178 120 3 115 290 562 737 3.18e-11 65.9
Msa1083970 MtrunA17_Chr5g0405451 28.289 152 107 2 133 282 261 412 4.51e-11 64.7
Msa1083970 MtrunA17_Chr5g0448561 35.714 98 59 2 356 449 417 514 4.70e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083970 AT3G04710.3 66.667 459 143 3 16 471 221 672 0.0 606
Msa1083970 AT3G04710.1 67.033 455 140 3 20 471 1 448 0.0 604
Msa1083970 AT3G04710.2 67.033 455 139 4 20 471 1 447 0.0 598
Msa1083970 AT4G12400.2 45.714 105 54 1 354 455 2 106 1.42e-19 92.0
Msa1083970 AT4G12400.2 35.088 114 71 1 354 464 369 482 1.87e-16 82.4
Msa1083970 AT4G12400.1 45.714 105 54 1 354 455 2 106 1.72e-19 91.7
Msa1083970 AT4G12400.1 35.088 114 71 1 354 464 369 482 2.60e-16 82.0
Msa1083970 AT1G62740.1 39.286 112 65 1 354 462 2 113 1.46e-16 82.8
Msa1083970 AT1G62740.1 33.929 112 71 1 356 464 384 495 1.66e-15 79.3
Msa1083970 AT5G20350.1 31.556 225 145 5 67 284 24 246 2.08e-14 76.3
Msa1083970 AT1G12270.1 34.821 112 70 1 356 464 385 496 2.31e-14 75.9
Msa1083970 AT1G12270.1 39.286 112 65 1 354 462 2 113 6.22e-14 74.7
Msa1083970 AT1G04190.1 37.624 101 60 1 358 455 19 119 7.39e-14 73.2
Msa1083970 AT2G03430.1 29.891 184 120 5 95 271 34 215 1.76e-13 70.5
Msa1083970 AT2G03430.1 32.468 154 96 3 61 210 70 219 6.18e-11 63.2
Msa1083970 AT5G37500.1 33.146 178 115 3 115 290 538 713 4.36e-13 72.4
Msa1083970 AT4G32500.1 28.436 211 141 4 144 351 545 748 8.61e-13 71.2
Msa1083970 AT2G14255.1 29.258 229 147 6 38 260 29 248 1.61e-12 70.1
Msa1083970 AT2G28840.1 27.119 236 145 4 73 302 45 259 3.60e-12 68.6
Msa1083970 AT2G25600.1 27.854 219 147 5 144 359 547 757 2.44e-11 66.6
Msa1083970 AT4G35230.1 30.000 160 97 4 287 432 324 482 3.29e-11 65.9

Find 119 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACCATTGCTAGCAATTT+AGG 0.149520 7_2:+84251264 Msa1083970:CDS
AACTTGATGTTATTCCTTCT+TGG 0.202708 7_2:+84253707 Msa1083970:CDS
ATCTGTTGCAGCTGATTCTT+TGG 0.215917 7_2:+84252509 Msa1083970:CDS
TTTAATTGCTTCCACTGTTT+TGG 0.221129 7_2:-84251052 None:intergenic
TACATATCAATAAGGTTAAA+AGG 0.270063 7_2:-84256212 None:intergenic
ATTACAGATTGTTCTCGATA+TGG 0.285003 7_2:+84250818 Msa1083970:CDS
ATTGGTCCAAAGCTTGTTAT+AGG 0.291093 7_2:+84255571 Msa1083970:CDS
GCATTGGCGCATTGTGAAAA+TGG 0.294690 7_2:+84256343 Msa1083970:three_prime_UTR
CTTCCAGCTGCAACCTGTAT+TGG 0.297839 7_2:-84253640 None:intergenic
TGACAACTACGGTTTATCTT+TGG 0.308207 7_2:-84256135 None:intergenic
TTCGGGAACACCGTTGGTTT+GGG 0.325527 7_2:+84251703 Msa1083970:CDS
TTTAGTCTCTTATCTTTGTA+AGG 0.326413 7_2:-84256171 None:intergenic
ATTCGGGAACACCGTTGGTT+TGG 0.327829 7_2:+84251702 Msa1083970:CDS
AGAAGGAATAACATCAAGTT+TGG 0.328022 7_2:-84253704 None:intergenic
ACACCGTTGGTTTGGGCTGC+TGG 0.331465 7_2:+84251710 Msa1083970:CDS
TGTCAAGGCTCGGGTTAATA+TGG 0.331560 7_2:+84256387 Msa1083970:three_prime_UTR
TTGCACATTGCAGCTGATAA+TGG 0.333370 7_2:+84253275 Msa1083970:CDS
TTGCATCATTCTGCTGGAAT+AGG 0.335655 7_2:+84251297 Msa1083970:CDS
TTAATATGGACCGCCATTAT+AGG 0.340760 7_2:+84256401 Msa1083970:three_prime_UTR
CTATTATGAACCACCTATAA+TGG 0.341203 7_2:-84256414 None:intergenic
ATCTTACGAGTACAGTTTAC+TGG 0.344120 7_2:+84256251 Msa1083970:three_prime_UTR
ATTCCTTCTTGGACTATTGA+TGG 0.346294 7_2:+84253718 Msa1083970:CDS
TCTCATTCATGCTGCACGTC+AGG 0.349718 7_2:+84251197 Msa1083970:CDS
GATCAGTTCCTGCTTTCAAC+AGG 0.361386 7_2:-84253319 None:intergenic
TCAAGACTTTACTTGTGTAT+AGG 0.364581 7_2:-84255195 None:intergenic
CCCGAATCACTTTCTAAGTC+AGG 0.367297 7_2:-84251686 None:intergenic
TTTACAAGCTCCTTGCTCTC+AGG 0.376147 7_2:-84255759 None:intergenic
AAAGAAAATACATATCAATA+AGG 0.394572 7_2:-84256220 None:intergenic
TCCTGACTTAGAAAGTGATT+CGG 0.397766 7_2:+84251685 Msa1083970:CDS
CCATCATCAGTTTCAGCATT+GGG 0.414646 7_2:-84252468 None:intergenic
CCTGACTTAGAAAGTGATTC+GGG 0.427650 7_2:+84251686 Msa1083970:CDS
CTTTAAGAGATCGAGATTGC+CGG 0.435481 7_2:-84250907 None:intergenic
AGGAGCTTGTAAATGCGTTC+AGG 0.442269 7_2:+84255769 Msa1083970:CDS
GCCTTCCCTATAACAAGCTT+TGG 0.445915 7_2:-84255577 None:intergenic
TGCAAGTGCGTCGGAAGCAT+CGG 0.447294 7_2:-84250844 None:intergenic
GAAGCTGGAAGAAAATTTCA+TGG 0.454075 7_2:+84256107 Msa1083970:CDS
ACGGCTTTGCATCATTCTGC+TGG 0.454550 7_2:+84251291 Msa1083970:CDS
ATCAAAATCAAGAGGGGATG+AGG 0.458977 7_2:+84255136 Msa1083970:CDS
ATGCTTAGAGCTGTTAATAC+AGG 0.462858 7_2:+84252533 Msa1083970:CDS
TTGGTCCAAAGCTTGTTATA+GGG 0.462903 7_2:+84255572 Msa1083970:CDS
TAACAAGCTTTGGACCAATC+TGG 0.465796 7_2:-84255567 None:intergenic
TTCCTTCTTGGACTATTGAT+GGG 0.466672 7_2:+84253719 Msa1083970:CDS
GAAGCTAGGTCAAGCTGAGC+AGG 0.467307 7_2:+84255509 Msa1083970:CDS
TAAATGTTAAAGAAAATAAC+CGG 0.467892 7_2:+84254477 Msa1083970:CDS
TACAGGGAAGCTGTTGAAGC+TGG 0.468882 7_2:+84256092 Msa1083970:intron
CATTGTGAAAATGGCAATGC+AGG 0.472920 7_2:+84256352 Msa1083970:three_prime_UTR
ATCTTGAAATATTATAGCAT+TGG 0.473747 7_2:+84256327 Msa1083970:three_prime_UTR
TAAGTCAGGATTAACTCCTC+TGG 0.476327 7_2:-84251672 None:intergenic
CTTCCGACGCACTTGCAGTT+AGG 0.476513 7_2:+84250850 Msa1083970:CDS
GCTAAGTATCTTATTGATCA+TGG 0.477834 7_2:+84251234 Msa1083970:CDS
AATTGCATGTTGTCAAGGCT+CGG 0.483209 7_2:+84256377 Msa1083970:three_prime_UTR
GCAAGTGCGTCGGAAGCATC+GGG 0.488101 7_2:-84250843 None:intergenic
GCCATCATCAGTTTCAGCAT+TGG 0.492771 7_2:-84252469 None:intergenic
CTCACCTCGTCAGAGACATT+AGG 0.497830 7_2:-84253341 None:intergenic
TGAATGCAATGTACCATCGC+TGG 0.498194 7_2:-84255466 None:intergenic
ATAAATTCCCTGTTGAAAGC+AGG 0.500352 7_2:+84253311 Msa1083970:CDS
TTACAAGCTCCTTGCTCTCA+GGG 0.500721 7_2:-84255758 None:intergenic
AACATCAAGTTTGGATGTCA+CGG 0.505613 7_2:-84253695 None:intergenic
ATTGCATGTTGTCAAGGCTC+GGG 0.512351 7_2:+84256378 Msa1083970:three_prime_UTR
TTAGTCTCTTATCTTTGTAA+GGG 0.516825 7_2:-84256170 None:intergenic
TAAAAGGAATGACTATCATA+CGG 0.521638 7_2:+84255163 Msa1083970:CDS
AATACAGGTTGCAGCTGGAA+GGG 0.537141 7_2:+84253642 Msa1083970:CDS
GGATGGTGTTAAGCCAATAC+AGG 0.538177 7_2:+84253627 Msa1083970:intron
CAATACAGGTTGCAGCTGGA+AGG 0.538296 7_2:+84253641 Msa1083970:CDS
GAATGCAATGTACCATCGCT+GGG 0.539778 7_2:-84255465 None:intergenic
AAGCCAATACAGGTTGCAGC+TGG 0.541821 7_2:+84253637 Msa1083970:CDS
ACATCAAGTTTGGATGTCAC+GGG 0.545819 7_2:-84253694 None:intergenic
ATAAGAGACTAAAACGTTGT+GGG 0.548191 7_2:+84256181 Msa1083970:three_prime_UTR
CTCATTCATGCTGCACGTCA+GGG 0.549715 7_2:+84251198 Msa1083970:CDS
AACACTTGACCCTGAGAGCA+AGG 0.550632 7_2:+84255749 Msa1083970:CDS
ATACAGGTTGCAGCTGGAAG+GGG 0.552229 7_2:+84253643 Msa1083970:CDS
TGCTAGCAATTTAGGAACCA+CGG 0.556932 7_2:+84251272 Msa1083970:CDS
GATAAGAGACTAAAACGTTG+TGG 0.562062 7_2:+84256180 Msa1083970:three_prime_UTR
AGTCTATGTTGGATGAAGCT+AGG 0.562469 7_2:+84255495 Msa1083970:CDS
TTCCTCAACGCTGCTCGTAC+CGG 0.562981 7_2:+84250888 Msa1083970:CDS
ATTCAAATAGAAGTCTATGT+TGG 0.563771 7_2:+84255484 Msa1083970:CDS
AAAGTAAATGTTAGTGCTGG+TGG 0.569289 7_2:+84253242 Msa1083970:CDS
CTTGAGCATTTGCTGTCCAG+AGG 0.572302 7_2:+84251656 Msa1083970:CDS
ATTGTTTCAACTTTCAACAC+AGG 0.574068 7_2:+84250736 Msa1083970:CDS
TCCAAAGCTTGTTATAGGGA+AGG 0.574646 7_2:+84255576 Msa1083970:CDS
CTGCAACAGATGAAATGAGT+GGG 0.576458 7_2:-84252497 None:intergenic
CCTAAATTGCTAGCAATGGT+AGG 0.580362 7_2:-84251264 None:intergenic
ATCCCATCAATAGTCCAAGA+AGG 0.585457 7_2:-84253721 None:intergenic
AGGCAAATTGCATGTTGTCA+AGG 0.586873 7_2:+84256372 Msa1083970:three_prime_UTR
CAGCAGAATCAAAATCAAGA+GGG 0.593887 7_2:+84255129 Msa1083970:CDS
ATCAGTTCCTGCTTTCAACA+GGG 0.598606 7_2:-84253318 None:intergenic
CCCAATGCTGAAACTGATGA+TGG 0.604551 7_2:+84252468 Msa1083970:CDS
TTATCAGCTGCAATGTGCAA+AGG 0.606996 7_2:-84253272 None:intergenic
GTAGAGCATTAAGACCAGAT+TGG 0.608756 7_2:+84255553 Msa1083970:CDS
GGTTCCTAAATTGCTAGCAA+TGG 0.609817 7_2:-84251268 None:intergenic
TTGTTTCAACTTTCAACACA+GGG 0.610600 7_2:+84250737 Msa1083970:CDS
CTGCCTAACTGCAAGTGCGT+CGG 0.612225 7_2:-84250853 None:intergenic
AAGTGATTCGGGAACACCGT+TGG 0.612822 7_2:+84251697 Msa1083970:CDS
TGCCGGTACGAGCAGCGTTG+AGG 0.612947 7_2:-84250890 None:intergenic
AAACAGCAGCATCCACAGAC+CGG 0.613311 7_2:-84254496 None:intergenic
TAAAGAAAATAACCGGTCTG+TGG 0.616124 7_2:+84254484 Msa1083970:CDS
ATCAATAAGATACTTAGCAG+TGG 0.617709 7_2:-84251229 None:intergenic
GCAGCAGAATCAAAATCAAG+AGG 0.620760 7_2:+84255128 Msa1083970:CDS
GCTAAAGTAAATGTTAGTGC+TGG 0.624109 7_2:+84253239 Msa1083970:CDS
TGACCAGCAGCCCAAACCAA+CGG 0.624815 7_2:-84251713 None:intergenic
ATATGGACCGCCATTATAGG+TGG 0.625560 7_2:+84256404 Msa1083970:three_prime_UTR
ACATGCCAGCAACAAACGCA+AGG 0.626173 7_2:-84255604 None:intergenic
CAAAGATTTATCCAAAACAG+TGG 0.629444 7_2:+84251041 Msa1083970:CDS
GCAGGCTTTAGCTGATGCAA+AGG 0.635071 7_2:+84255527 Msa1083970:CDS
ATTGATTTGAATCCCAGCGA+TGG 0.637054 7_2:+84255453 Msa1083970:CDS
ATTAAAGATGCAAACAAGCG+TGG 0.639246 7_2:+84251069 Msa1083970:CDS
GCAGCTGGAAGGGGAAATCG+TGG 0.646088 7_2:+84253652 Msa1083970:CDS
AGCAGAATGATGCAAAGCCG+TGG 0.654699 7_2:-84251289 None:intergenic
GCTGCAACAGATGAAATGAG+TGG 0.659045 7_2:-84252498 None:intergenic
ATTGATGATAAAGACGAAGA+CGG 0.662139 7_2:+84251165 Msa1083970:CDS
AGCAGAATCAAAATCAAGAG+GGG 0.665063 7_2:+84255130 Msa1083970:CDS
TTATGAACCACCTATAATGG+CGG 0.669857 7_2:-84256411 None:intergenic
ATTTGCGGAACAATTAGACG+AGG 0.679877 7_2:+84251017 Msa1083970:CDS
TTTGCGGAACAATTAGACGA+GGG 0.690385 7_2:+84251018 Msa1083970:CDS
GTCACTGTTCTATTAAAACA+TGG 0.691599 7_2:+84251752 Msa1083970:CDS
TGCAACAGATGAAATGAGTG+GGG 0.693780 7_2:-84252496 None:intergenic
CATCAAGTTTGGATGTCACG+GGG 0.695475 7_2:-84253693 None:intergenic
TGATCCTAATGTCTCTGACG+AGG 0.709103 7_2:+84253337 Msa1083970:CDS
TCGAGAGCAAAATATCCCTG+AGG 0.758992 7_2:+84254520 Msa1083970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAATAATAAAAAAC+AGG + chr7_2:84250782-84250801 Msa1083970:intron 10.0%
!! AGAAAAAATAATAAAAAACA+GGG + chr7_2:84250783-84250802 Msa1083970:intron 10.0%
!! AAAAATTATACTAATTAGAA+AGG + chr7_2:84256288-84256307 Msa1083970:three_prime_UTR 10.0%
!! AATATACTATGTTTATGATT+TGG + chr7_2:84252592-84252611 Msa1083970:intron 15.0%
!!! TAAATTTTCTACAATTTTCA+TGG - chr7_2:84252685-84252704 None:intergenic 15.0%
!!! AATTTAGTTCCAAATATTAA+TGG - chr7_2:84253587-84253606 None:intergenic 15.0%
!! TAAATGTTAAAGAAAATAAC+CGG + chr7_2:84254477-84254496 Msa1083970:CDS 15.0%
!! AAAGAAAATACATATCAATA+AGG - chr7_2:84256223-84256242 None:intergenic 15.0%
!!! TTTTTCTTTGTTTCTTTCAA+AGG - chr7_2:84250770-84250789 None:intergenic 20.0%
!!! AATAATAAAAAACAGGGTTT+TGG + chr7_2:84250789-84250808 Msa1083970:intron 20.0%
!!! TATTGTTTTCATAGAATTTG+CGG + chr7_2:84251002-84251021 Msa1083970:intron 20.0%
!! AAGTAACACAAATTAAGAAA+TGG - chr7_2:84251798-84251817 None:intergenic 20.0%
!! GAATTCTATATCTATTTGAT+TGG + chr7_2:84251883-84251902 Msa1083970:intron 20.0%
!! TACTAATATGCTTATTACAT+GGG + chr7_2:84252306-84252325 Msa1083970:intron 20.0%
!! ACTAAATTGAAAACTTAACA+CGG - chr7_2:84252364-84252383 None:intergenic 20.0%
!! CATAGTATATTGTTTAGTAA+GGG - chr7_2:84252583-84252602 None:intergenic 20.0%
!! ACATAGTATATTGTTTAGTA+AGG - chr7_2:84252584-84252603 None:intergenic 20.0%
!! AATTGTAGAAAATTTATCAG+TGG + chr7_2:84252689-84252708 Msa1083970:intron 20.0%
!!! ACTAGCAGTTTAATTTTTAA+TGG - chr7_2:84252840-84252859 None:intergenic 20.0%
!! ATTGTTATGGATATATAACA+TGG - chr7_2:84252894-84252913 None:intergenic 20.0%
!! AATCAACTAACTAATTGTTA+TGG - chr7_2:84252907-84252926 None:intergenic 20.0%
!! AAACATCTATCTAATGAAAA+AGG + chr7_2:84253001-84253020 Msa1083970:intron 20.0%
!! AACATCTATCTAATGAAAAA+GGG + chr7_2:84253002-84253021 Msa1083970:intron 20.0%
!! GAATACAAGAAAATACTATT+GGG - chr7_2:84253470-84253489 None:intergenic 20.0%
!! AGAATACAAGAAAATACTAT+TGG - chr7_2:84253471-84253490 None:intergenic 20.0%
!!! AACTAAATTTTATGTCTGTT+TGG + chr7_2:84253598-84253617 Msa1083970:intron 20.0%
!!! CTTTGTATTTTAAGATAATG+CGG - chr7_2:84253909-84253928 None:intergenic 20.0%
!! TATACTCTTAAAGTTCAAAA+AGG + chr7_2:84254176-84254195 Msa1083970:intron 20.0%
!! ATACTCTTAAAGTTCAAAAA+GGG + chr7_2:84254177-84254196 Msa1083970:intron 20.0%
!!! TTTAAACTTTTAAGTGATTG+TGG + chr7_2:84254292-84254311 Msa1083970:intron 20.0%
!! TATACTCTTAAAGTTCAAAA+AGG + chr7_2:84254176-84254195 Msa1083970:intron 20.0%
!! ATACTCTTAAAGTTCAAAAA+GGG + chr7_2:84254177-84254196 Msa1083970:intron 20.0%
!! GTACAGCTAATATATTTAAT+AGG - chr7_2:84254554-84254573 None:intergenic 20.0%
!!! ATTTTGCAATAGTTAATGTA+TGG + chr7_2:84255833-84255852 Msa1083970:intron 20.0%
!! TACATATCAATAAGGTTAAA+AGG - chr7_2:84256215-84256234 None:intergenic 20.0%
!! ATCTTGAAATATTATAGCAT+TGG + chr7_2:84256327-84256346 Msa1083970:three_prime_UTR 20.0%
! CGTAACAGAATAATAAAGAA+AGG - chr7_2:84251329-84251348 None:intergenic 25.0%
! AAAAAGAGATAGTTTCTGTT+TGG - chr7_2:84251528-84251547 None:intergenic 25.0%
!! TGGATATTTAGAGTATCAAT+TGG + chr7_2:84251903-84251922 Msa1083970:intron 25.0%
!! ATTTTCTTGAATAGTTTACG+AGG + chr7_2:84252161-84252180 Msa1083970:intron 25.0%
! CTATAATACATTGTCTCATT+AGG - chr7_2:84252224-84252243 None:intergenic 25.0%
! CTACTAATATGCTTATTACA+TGG + chr7_2:84252305-84252324 Msa1083970:intron 25.0%
! AGAAAATTTATCAGTGGAAA+TGG + chr7_2:84252695-84252714 Msa1083970:intron 25.0%
!! CAGTACATTTTTGTAATACT+GGG - chr7_2:84252952-84252971 None:intergenic 25.0%
! CAGTATTACAAAAATGTACT+GGG + chr7_2:84252951-84252970 Msa1083970:intron 25.0%
! ACATTCATCAACAAAATACA+AGG - chr7_2:84253082-84253101 None:intergenic 25.0%
!!! ATAACAAACTTTTAAGGCTA+CGG - chr7_2:84253136-84253155 None:intergenic 25.0%
!! GATAGCATAACAAACTTTTA+AGG - chr7_2:84253142-84253161 None:intergenic 25.0%
! TCAGAAGTTGAAAAATATAC+AGG - chr7_2:84253182-84253201 None:intergenic 25.0%
! CAGTAAAATCCAAATATAGA+TGG - chr7_2:84253206-84253225 None:intergenic 25.0%
!! ATTTGGATTTTACTGTATAC+AGG + chr7_2:84253211-84253230 Msa1083970:intron 25.0%
! TTCTTATATAAGTAGACTCT+CGG - chr7_2:84253447-84253466 None:intergenic 25.0%
! TGAAAAGATTGGAAAAATCT+TGG - chr7_2:84253499-84253518 None:intergenic 25.0%
! TAGTTCCAAATATTAATGGA+AGG - chr7_2:84253583-84253602 None:intergenic 25.0%
! TGTAGCTATCCAAATTAAAA+TGG + chr7_2:84254020-84254039 Msa1083970:intron 25.0%
!!! TATGTTCCTCCATTTTAATT+TGG - chr7_2:84254032-84254051 None:intergenic 25.0%
! CTTTAAACTTTAACTGATTG+TGG + chr7_2:84254118-84254137 Msa1083970:intron 25.0%
! TATGACTGAATACACATAAT+TGG - chr7_2:84254675-84254694 None:intergenic 25.0%
! AAGAATAAGCAATTGATCAT+GGG - chr7_2:84254990-84255009 None:intergenic 25.0%
! TAAGAATAAGCAATTGATCA+TGG - chr7_2:84254991-84255010 None:intergenic 25.0%
! TAAAAGGAATGACTATCATA+CGG + chr7_2:84255163-84255182 Msa1083970:CDS 25.0%
! ATTCAAATAGAAGTCTATGT+TGG + chr7_2:84255484-84255503 Msa1083970:CDS 25.0%
! CAATAGTTAATGTATGGTTT+AGG + chr7_2:84255839-84255858 Msa1083970:intron 25.0%
!! TGTATTCATTCATCTTTTAC+AGG + chr7_2:84256075-84256094 Msa1083970:intron 25.0%
!! GTATTCATTCATCTTTTACA+GGG + chr7_2:84256076-84256095 Msa1083970:intron 25.0%
! CATTAGAAAAATGACAACTA+CGG - chr7_2:84256149-84256168 None:intergenic 25.0%
! TTAGTCTCTTATCTTTGTAA+GGG - chr7_2:84256173-84256192 None:intergenic 25.0%
! TTTAGTCTCTTATCTTTGTA+AGG - chr7_2:84256174-84256193 None:intergenic 25.0%
ATTGTTTCAACTTTCAACAC+AGG + chr7_2:84250736-84250755 Msa1083970:CDS 30.0%
TTGTTTCAACTTTCAACACA+GGG + chr7_2:84250737-84250756 Msa1083970:CDS 30.0%
ATTACAGATTGTTCTCGATA+TGG + chr7_2:84250818-84250837 Msa1083970:CDS 30.0%
CAAAGATTTATCCAAAACAG+TGG + chr7_2:84251041-84251060 Msa1083970:CDS 30.0%
! TTTAATTGCTTCCACTGTTT+TGG - chr7_2:84251055-84251074 None:intergenic 30.0%
!! GATTTGCAGTTATTTTGTTG+AGG + chr7_2:84251128-84251147 Msa1083970:CDS 30.0%
! ATTGATGATAAAGACGAAGA+CGG + chr7_2:84251165-84251184 Msa1083970:CDS 30.0%
ATCAATAAGATACTTAGCAG+TGG - chr7_2:84251232-84251251 None:intergenic 30.0%
GCTAAGTATCTTATTGATCA+TGG + chr7_2:84251234-84251253 Msa1083970:CDS 30.0%
TTAAGATGTTTCTCCAAACA+TGG - chr7_2:84251380-84251399 None:intergenic 30.0%
!! TGATATGTGGTTTTTGTTTC+AGG + chr7_2:84251620-84251639 Msa1083970:intron 30.0%
GTCACTGTTCTATTAAAACA+TGG + chr7_2:84251752-84251771 Msa1083970:CDS 30.0%
AAAACAACACCAAGATGAAA+GGG - chr7_2:84252444-84252463 None:intergenic 30.0%
! TGATTTGGATATGTGAAACA+TGG + chr7_2:84252607-84252626 Msa1083970:intron 30.0%
AAATTTATCAGTGGAAATGG+TGG + chr7_2:84252698-84252717 Msa1083970:intron 30.0%
AATTTATCAGTGGAAATGGT+GGG + chr7_2:84252699-84252718 Msa1083970:intron 30.0%
TCATTTGAGTGACATATTGT+AGG + chr7_2:84252804-84252823 Msa1083970:intron 30.0%
! GCTAGTATGATAATGTAATC+AGG + chr7_2:84252854-84252873 Msa1083970:intron 30.0%
! CCAGTACATTTTTGTAATAC+TGG - chr7_2:84252953-84252972 None:intergenic 30.0%
CCAGTATTACAAAAATGTAC+TGG + chr7_2:84252950-84252969 Msa1083970:intron 30.0%
! GTTGATGAATGTACCTTAAA+AGG + chr7_2:84253090-84253109 Msa1083970:intron 30.0%
!!! TAACAAACTTTTAAGGCTAC+GGG - chr7_2:84253135-84253154 None:intergenic 30.0%
ACAGGAAATCTATATTCACT+AGG - chr7_2:84253164-84253183 None:intergenic 30.0%
ACTTCTGATCCATCTATATT+TGG + chr7_2:84253194-84253213 Msa1083970:intron 30.0%
AATTTCCTAACTTCCTCATT+TGG + chr7_2:84253372-84253391 Msa1083970:intron 30.0%
AGTTCTATACTAACATCAGA+AGG - chr7_2:84253405-84253424 None:intergenic 30.0%
GATGTTAGTATAGAACTCAA+TGG + chr7_2:84253408-84253427 Msa1083970:intron 30.0%
ATGTGCCTTCCATTAATATT+TGG + chr7_2:84253575-84253594 Msa1083970:intron 30.0%
AGAAGGAATAACATCAAGTT+TGG - chr7_2:84253707-84253726 None:intergenic 30.0%
AACTTGATGTTATTCCTTCT+TGG + chr7_2:84253707-84253726 Msa1083970:CDS 30.0%
GCAGGACATAGAAAAAATTA+GGG - chr7_2:84253793-84253812 None:intergenic 30.0%
AGCAGGACATAGAAAAAATT+AGG - chr7_2:84253794-84253813 None:intergenic 30.0%
!!! TAATTTTTTCTATGTCCTGC+TGG + chr7_2:84253793-84253812 Msa1083970:intron 30.0%
! GAGATAATTACGCTTACTTT+TGG + chr7_2:84253850-84253869 Msa1083970:intron 30.0%
TATTTGCCTTGTAGTTTCAT+AGG + chr7_2:84253931-84253950 Msa1083970:intron 30.0%
AGCTATCCAAATTAAAATGG+AGG + chr7_2:84254023-84254042 Msa1083970:intron 30.0%
CATATAGATTTATTCCTTGC+TGG - chr7_2:84254083-84254102 None:intergenic 30.0%
CATATAGATTTATTCCTTGC+TGG - chr7_2:84254083-84254102 None:intergenic 30.0%
ATTAAGAAATCCACTTTGTC+AGG - chr7_2:84254416-84254435 None:intergenic 30.0%
AATCTTTGTACTGAGTTGTA+AGG + chr7_2:84254433-84254452 Msa1083970:intron 30.0%
ATCTTTGTACTGAGTTGTAA+GGG + chr7_2:84254434-84254453 Msa1083970:intron 30.0%
!!! GCTGTACTTTTTTCTCAATT+TGG + chr7_2:84254567-84254586 Msa1083970:intron 30.0%
TTTCTCATTTATCACTCTTC+TGG + chr7_2:84254850-84254869 Msa1083970:intron 30.0%
ATAATTGTGTGAACTCATCT+AGG + chr7_2:84255082-84255101 Msa1083970:intron 30.0%
TCAAGACTTTACTTGTGTAT+AGG - chr7_2:84255198-84255217 None:intergenic 30.0%
TCATTGAGACATAACTAACA+CGG - chr7_2:84255293-84255312 None:intergenic 30.0%
AACTAGACTAGATAAACATG+TGG - chr7_2:84255343-84255362 None:intergenic 30.0%
! TTCTTTTTGAATGTGTTTGC+AGG + chr7_2:84255428-84255447 Msa1083970:intron 30.0%
ATAAGAGACTAAAACGTTGT+GGG + chr7_2:84256181-84256200 Msa1083970:three_prime_UTR 30.0%
CTATTATGAACCACCTATAA+TGG - chr7_2:84256417-84256436 None:intergenic 30.0%
ATTAAAGATGCAAACAAGCG+TGG + chr7_2:84251069-84251088 Msa1083970:CDS 35.0%
AAGTTATCCTTGAGAGCTTA+TGG + chr7_2:84251455-84251474 Msa1083970:intron 35.0%
CATATCACAACAAAATCAGC+AGG - chr7_2:84251607-84251626 None:intergenic 35.0%
!! GCTGATTTTGTTGTGATATG+TGG + chr7_2:84251607-84251626 Msa1083970:intron 35.0%
TCCTGACTTAGAAAGTGATT+CGG + chr7_2:84251685-84251704 Msa1083970:CDS 35.0%
! GCATATTGACTATCGAAATG+TGG - chr7_2:84252028-84252047 None:intergenic 35.0%
ATATGCTTATTACATGGGCA+TGG + chr7_2:84252311-84252330 Msa1083970:intron 35.0%
TAATGCTTTCCCTTTCATCT+TGG + chr7_2:84252432-84252451 Msa1083970:intron 35.0%
CAAAACAACACCAAGATGAA+AGG - chr7_2:84252445-84252464 None:intergenic 35.0%
ATGCTTAGAGCTGTTAATAC+AGG + chr7_2:84252533-84252552 Msa1083970:CDS 35.0%
CACGATTCTATGAATGATGT+TGG - chr7_2:84252759-84252778 None:intergenic 35.0%
AAGGGAAGAGATAGATACAT+TGG + chr7_2:84253020-84253039 Msa1083970:intron 35.0%
GTTCAAAGCTATAGAAAGCT+GGG + chr7_2:84253051-84253070 Msa1083970:intron 35.0%
GCTAAAGTAAATGTTAGTGC+TGG + chr7_2:84253239-84253258 Msa1083970:CDS 35.0%
! AAAGTAAATGTTAGTGCTGG+TGG + chr7_2:84253242-84253261 Msa1083970:CDS 35.0%
ATAAATTCCCTGTTGAAAGC+AGG + chr7_2:84253311-84253330 Msa1083970:CDS 35.0%
TTTATGTCTGTTTGGATCAC+AGG + chr7_2:84253606-84253625 Msa1083970:intron 35.0%
AACATCAAGTTTGGATGTCA+CGG - chr7_2:84253698-84253717 None:intergenic 35.0%
ATTCCTTCTTGGACTATTGA+TGG + chr7_2:84253718-84253737 Msa1083970:CDS 35.0%
TTCCTTCTTGGACTATTGAT+GGG + chr7_2:84253719-84253738 Msa1083970:CDS 35.0%
ATCAGAAAGTAAAAAGCAGC+AGG + chr7_2:84253759-84253778 Msa1083970:CDS 35.0%
ATAATGCGGTGACTATTGTA+AGG - chr7_2:84253895-84253914 None:intergenic 35.0%
TGACAACCTATGAAACTACA+AGG - chr7_2:84253940-84253959 None:intergenic 35.0%
! ATTTTTGTTGCCTGACAAAG+TGG + chr7_2:84254403-84254422 Msa1083970:intron 35.0%
TAAAGAAAATAACCGGTCTG+TGG + chr7_2:84254484-84254503 Msa1083970:CDS 35.0%
TAATAGGAAAACACACCTCA+GGG - chr7_2:84254538-84254557 None:intergenic 35.0%
TTAATAGGAAAACACACCTC+AGG - chr7_2:84254539-84254558 None:intergenic 35.0%
AATAACCAGCCAAAAACTGA+GGG - chr7_2:84254789-84254808 None:intergenic 35.0%
AAATAACCAGCCAAAAACTG+AGG - chr7_2:84254790-84254809 None:intergenic 35.0%
CAGAATCCTAAGAAGAAGAA+AGG - chr7_2:84254830-84254849 None:intergenic 35.0%
CAGCAGAATCAAAATCAAGA+GGG + chr7_2:84255129-84255148 Msa1083970:CDS 35.0%
AGCAGAATCAAAATCAAGAG+GGG + chr7_2:84255130-84255149 Msa1083970:CDS 35.0%
ATTGAGACATAACTAACACG+GGG - chr7_2:84255291-84255310 None:intergenic 35.0%
CATTGAGACATAACTAACAC+GGG - chr7_2:84255292-84255311 None:intergenic 35.0%
!! ATTGGTCCAAAGCTTGTTAT+AGG + chr7_2:84255571-84255590 Msa1083970:CDS 35.0%
!! TTGGTCCAAAGCTTGTTATA+GGG + chr7_2:84255572-84255591 Msa1083970:CDS 35.0%
GAAGCTGGAAGAAAATTTCA+TGG + chr7_2:84256107-84256126 Msa1083970:CDS 35.0%
TGACAACTACGGTTTATCTT+TGG - chr7_2:84256138-84256157 None:intergenic 35.0%
GATAAGAGACTAAAACGTTG+TGG + chr7_2:84256180-84256199 Msa1083970:three_prime_UTR 35.0%
ATCTTACGAGTACAGTTTAC+TGG + chr7_2:84256251-84256270 Msa1083970:three_prime_UTR 35.0%
TTAATATGGACCGCCATTAT+AGG + chr7_2:84256401-84256420 Msa1083970:three_prime_UTR 35.0%
TTATGAACCACCTATAATGG+CGG - chr7_2:84256414-84256433 None:intergenic 35.0%
! CTTTAAGAGATCGAGATTGC+CGG - chr7_2:84250910-84250929 None:intergenic 40.0%
ATTTGCGGAACAATTAGACG+AGG + chr7_2:84251017-84251036 Msa1083970:CDS 40.0%
TTTGCGGAACAATTAGACGA+GGG + chr7_2:84251018-84251037 Msa1083970:CDS 40.0%
! CTTCATTTTGCTGCTCTTGA+AGG + chr7_2:84251096-84251115 Msa1083970:CDS 40.0%
CCTAAATTGCTAGCAATGGT+AGG - chr7_2:84251267-84251286 None:intergenic 40.0%
CCTACCATTGCTAGCAATTT+AGG + chr7_2:84251264-84251283 Msa1083970:CDS 40.0%
GGTTCCTAAATTGCTAGCAA+TGG - chr7_2:84251271-84251290 None:intergenic 40.0%
TGCTAGCAATTTAGGAACCA+CGG + chr7_2:84251272-84251291 Msa1083970:CDS 40.0%
TTGCATCATTCTGCTGGAAT+AGG + chr7_2:84251297-84251316 Msa1083970:CDS 40.0%
GATTGCTCTATGTCCATGTT+TGG + chr7_2:84251364-84251383 Msa1083970:intron 40.0%
TATCAGTCCATAAGCTCTCA+AGG - chr7_2:84251465-84251484 None:intergenic 40.0%
!! GGTTTTTGTTTCAGGAGACA+CGG + chr7_2:84251628-84251647 Msa1083970:intron 40.0%
TAAGTCAGGATTAACTCCTC+TGG - chr7_2:84251675-84251694 None:intergenic 40.0%
CCTGACTTAGAAAGTGATTC+GGG + chr7_2:84251686-84251705 Msa1083970:CDS 40.0%
! GCTTTGTTCTTCCTATCATC+TGG + chr7_2:84251971-84251990 Msa1083970:intron 40.0%
!! TGCAGAATCGTTTTCTAGAG+TGG - chr7_2:84252259-84252278 None:intergenic 40.0%
CCATCATCAGTTTCAGCATT+GGG - chr7_2:84252471-84252490 None:intergenic 40.0%
TGCAACAGATGAAATGAGTG+GGG - chr7_2:84252499-84252518 None:intergenic 40.0%
CTGCAACAGATGAAATGAGT+GGG - chr7_2:84252500-84252519 None:intergenic 40.0%
! ATCTGTTGCAGCTGATTCTT+TGG + chr7_2:84252509-84252528 Msa1083970:CDS 40.0%
CGTTCAAAGCTATAGAAAGC+TGG + chr7_2:84253050-84253069 Msa1083970:intron 40.0%
!! ACTTGTTGAGACGCCTTTTA+AGG - chr7_2:84253106-84253125 None:intergenic 40.0%
!!! AACTTTTAAGGCTACGGGAT+GGG - chr7_2:84253130-84253149 None:intergenic 40.0%
!!! AAACTTTTAAGGCTACGGGA+TGG - chr7_2:84253131-84253150 None:intergenic 40.0%
! GGATTTTACTGTATACAGGC+AGG + chr7_2:84253215-84253234 Msa1083970:intron 40.0%
TTATCAGCTGCAATGTGCAA+AGG - chr7_2:84253275-84253294 None:intergenic 40.0%
TTGCACATTGCAGCTGATAA+TGG + chr7_2:84253275-84253294 Msa1083970:CDS 40.0%
ATCAGTTCCTGCTTTCAACA+GGG - chr7_2:84253321-84253340 None:intergenic 40.0%
ATGAGCCAAATGAGGAAGTT+AGG - chr7_2:84253380-84253399 None:intergenic 40.0%
AGAAGGTTATGAGCCAAATG+AGG - chr7_2:84253388-84253407 None:intergenic 40.0%
ATCAGAGACGCTGAAAAGAT+TGG - chr7_2:84253510-84253529 None:intergenic 40.0%
CTTATCCAGTGTAGTGCATA+TGG + chr7_2:84253540-84253559 Msa1083970:intron 40.0%
ACATCAAGTTTGGATGTCAC+GGG - chr7_2:84253697-84253716 None:intergenic 40.0%
ATCCCATCAATAGTCCAAGA+AGG - chr7_2:84253724-84253743 None:intergenic 40.0%
GCAACGGATAACAACAAAGA+TGG - chr7_2:84254762-84254781 None:intergenic 40.0%
ATAACCAGCCAAAAACTGAG+GGG - chr7_2:84254788-84254807 None:intergenic 40.0%
! TGATTCTGCTGCTCTCTTTT+TGG - chr7_2:84255120-84255139 None:intergenic 40.0%
GCAGCAGAATCAAAATCAAG+AGG + chr7_2:84255128-84255147 Msa1083970:CDS 40.0%
ATCAAAATCAAGAGGGGATG+AGG + chr7_2:84255136-84255155 Msa1083970:CDS 40.0%
!! ATTGATTTGAATCCCAGCGA+TGG + chr7_2:84255453-84255472 Msa1083970:CDS 40.0%
AGTCTATGTTGGATGAAGCT+AGG + chr7_2:84255495-84255514 Msa1083970:CDS 40.0%
! GTAGAGCATTAAGACCAGAT+TGG + chr7_2:84255553-84255572 Msa1083970:CDS 40.0%
!! TAACAAGCTTTGGACCAATC+TGG - chr7_2:84255570-84255589 None:intergenic 40.0%
!! TCCAAAGCTTGTTATAGGGA+AGG + chr7_2:84255576-84255595 Msa1083970:CDS 40.0%
!! ATTTGCTATCCTTGTTGCAG+AGG + chr7_2:84255691-84255710 Msa1083970:intron 40.0%
TTCATCAAACCTCTGCAACA+AGG - chr7_2:84255703-84255722 None:intergenic 40.0%
GATTAAAGACTTGCATGTGC+TGG - chr7_2:84256019-84256038 None:intergenic 40.0%
CATTGTGAAAATGGCAATGC+AGG + chr7_2:84256352-84256371 Msa1083970:three_prime_UTR 40.0%
AGGCAAATTGCATGTTGTCA+AGG + chr7_2:84256372-84256391 Msa1083970:three_prime_UTR 40.0%
AATTGCATGTTGTCAAGGCT+CGG + chr7_2:84256377-84256396 Msa1083970:three_prime_UTR 40.0%
CCCGAATCACTTTCTAAGTC+AGG - chr7_2:84251689-84251708 None:intergenic 45.0%
CTTCCTATCATCTGGATCTG+TGG + chr7_2:84251979-84251998 Msa1083970:intron 45.0%
AGACCACAGATCCAGATGAT+AGG - chr7_2:84251985-84252004 None:intergenic 45.0%
CCCAATGCTGAAACTGATGA+TGG + chr7_2:84252468-84252487 Msa1083970:CDS 45.0%
GCCATCATCAGTTTCAGCAT+TGG - chr7_2:84252472-84252491 None:intergenic 45.0%
GCTGCAACAGATGAAATGAG+TGG - chr7_2:84252501-84252520 None:intergenic 45.0%
TACTGGGAATCAGTGCTAGT+GGG + chr7_2:84252967-84252986 Msa1083970:intron 45.0%
GATCAGTTCCTGCTTTCAAC+AGG - chr7_2:84253322-84253341 None:intergenic 45.0%
TGATCCTAATGTCTCTGACG+AGG + chr7_2:84253337-84253356 Msa1083970:CDS 45.0%
AGTAGACTCTCGGCATTGTT+TGG - chr7_2:84253437-84253456 None:intergenic 45.0%
CACAACCATATGCACTACAC+TGG - chr7_2:84253548-84253567 None:intergenic 45.0%
CAGTGTAGTGCATATGGTTG+TGG + chr7_2:84253546-84253565 Msa1083970:intron 45.0%
TGTCTGTTTGGATCACAGGA+TGG + chr7_2:84253610-84253629 Msa1083970:intron 45.0%
! GGATGGTGTTAAGCCAATAC+AGG + chr7_2:84253627-84253646 Msa1083970:intron 45.0%
AATACAGGTTGCAGCTGGAA+GGG + chr7_2:84253642-84253661 Msa1083970:CDS 45.0%
CATCAAGTTTGGATGTCACG+GGG - chr7_2:84253696-84253715 None:intergenic 45.0%
ATTCCTTAACTCTGTCCAGC+AGG - chr7_2:84253811-84253830 None:intergenic 45.0%
TGCGGTGACTATTGTAAGGA+CGG - chr7_2:84253891-84253910 None:intergenic 45.0%
TATTCCTTGCTGGAGAATGC+TGG - chr7_2:84254073-84254092 None:intergenic 45.0%
TATTCCTTGCTGGAGAATGC+TGG - chr7_2:84254073-84254092 None:intergenic 45.0%
TCGAGAGCAAAATATCCCTG+AGG + chr7_2:84254520-84254539 Msa1083970:CDS 45.0%
AAAAACTGAGGGGAACGCAA+CGG - chr7_2:84254778-84254797 None:intergenic 45.0%
AGCGAGCCTTTCTTCTTCTT+AGG + chr7_2:84254821-84254840 Msa1083970:intron 45.0%
GACAGTGCACATACTCGATA+GGG - chr7_2:84254885-84254904 None:intergenic 45.0%
AGACAGTGCACATACTCGAT+AGG - chr7_2:84254886-84254905 None:intergenic 45.0%
! GAGGGGATGAGGCTTTTAAA+AGG + chr7_2:84255147-84255166 Msa1083970:CDS 45.0%
! TGTTTCTGTGCAGTGTTCAC+TGG + chr7_2:84255313-84255332 Msa1083970:intron 45.0%
GAATGCAATGTACCATCGCT+GGG - chr7_2:84255468-84255487 None:intergenic 45.0%
TGAATGCAATGTACCATCGC+TGG - chr7_2:84255469-84255488 None:intergenic 45.0%
GCCTTCCCTATAACAAGCTT+TGG - chr7_2:84255580-84255599 None:intergenic 45.0%
TGTCCTGGAGCAAATGTCAA+GGG - chr7_2:84255647-84255666 None:intergenic 45.0%
GAAACGTGAATCATGTGTCC+TGG - chr7_2:84255662-84255681 None:intergenic 45.0%
TTACAAGCTCCTTGCTCTCA+GGG - chr7_2:84255761-84255780 None:intergenic 45.0%
TTTACAAGCTCCTTGCTCTC+AGG - chr7_2:84255762-84255781 None:intergenic 45.0%
AGGAGCTTGTAAATGCGTTC+AGG + chr7_2:84255769-84255788 Msa1083970:CDS 45.0%
! AAAGACTTGCATGTGCTGGT+TGG - chr7_2:84256015-84256034 None:intergenic 45.0%
! GCATTGGCGCATTGTGAAAA+TGG + chr7_2:84256343-84256362 Msa1083970:three_prime_UTR 45.0%
ATTGCATGTTGTCAAGGCTC+GGG + chr7_2:84256378-84256397 Msa1083970:three_prime_UTR 45.0%
TGTCAAGGCTCGGGTTAATA+TGG + chr7_2:84256387-84256406 Msa1083970:three_prime_UTR 45.0%
ATATGGACCGCCATTATAGG+TGG + chr7_2:84256404-84256423 Msa1083970:three_prime_UTR 45.0%
TCTCATTCATGCTGCACGTC+AGG + chr7_2:84251197-84251216 Msa1083970:CDS 50.0%
CTCATTCATGCTGCACGTCA+GGG + chr7_2:84251198-84251217 Msa1083970:CDS 50.0%
AGCAGAATGATGCAAAGCCG+TGG - chr7_2:84251292-84251311 None:intergenic 50.0%
ACGGCTTTGCATCATTCTGC+TGG + chr7_2:84251291-84251310 Msa1083970:CDS 50.0%
!! CTTGAGCATTTGCTGTCCAG+AGG + chr7_2:84251656-84251675 Msa1083970:CDS 50.0%
! AAGTGATTCGGGAACACCGT+TGG + chr7_2:84251697-84251716 Msa1083970:CDS 50.0%
! ATTCGGGAACACCGTTGGTT+TGG + chr7_2:84251702-84251721 Msa1083970:CDS 50.0%
!! TTCGGGAACACCGTTGGTTT+GGG + chr7_2:84251703-84251722 Msa1083970:CDS 50.0%
GTACTGGGAATCAGTGCTAG+TGG + chr7_2:84252966-84252985 Msa1083970:intron 50.0%
CTCACCTCGTCAGAGACATT+AGG - chr7_2:84253344-84253363 None:intergenic 50.0%
AAGCCAATACAGGTTGCAGC+TGG + chr7_2:84253637-84253656 Msa1083970:CDS 50.0%
CTTCCAGCTGCAACCTGTAT+TGG - chr7_2:84253643-84253662 None:intergenic 50.0%
CAATACAGGTTGCAGCTGGA+AGG + chr7_2:84253641-84253660 Msa1083970:CDS 50.0%
ATACAGGTTGCAGCTGGAAG+GGG + chr7_2:84253643-84253662 Msa1083970:CDS 50.0%
TGTCCTGCTGGACAGAGTTA+AGG + chr7_2:84253805-84253824 Msa1083970:intron 50.0%
GAGTTGTAAGGGCAATGTGC+AGG + chr7_2:84254445-84254464 Msa1083970:intron 50.0%
AAACAGCAGCATCCACAGAC+CGG - chr7_2:84254499-84254518 None:intergenic 50.0%
! GTTGCGTTCCCCTCAGTTTT+TGG + chr7_2:84254777-84254796 Msa1083970:intron 50.0%
!!! GCTGCTCTCTTTTTGGCTTC+AGG - chr7_2:84255113-84255132 None:intergenic 50.0%
GACATAACTAACACGGGGCA+TGG - chr7_2:84255286-84255305 None:intergenic 50.0%
! GCAGGCTTTAGCTGATGCAA+AGG + chr7_2:84255527-84255546 Msa1083970:CDS 50.0%
ACATGCCAGCAACAAACGCA+AGG - chr7_2:84255607-84255626 None:intergenic 50.0%
TGTCAAGGGGGAAAGGTTTC+AGG - chr7_2:84255633-84255652 None:intergenic 50.0%
GAGCAAATGTCAAGGGGGAA+AGG - chr7_2:84255640-84255659 None:intergenic 50.0%
TCCTGGAGCAAATGTCAAGG+GGG - chr7_2:84255645-84255664 None:intergenic 50.0%
GTCCTGGAGCAAATGTCAAG+GGG - chr7_2:84255646-84255665 None:intergenic 50.0%
GTGTCCTGGAGCAAATGTCA+AGG - chr7_2:84255648-84255667 None:intergenic 50.0%
AACACTTGACCCTGAGAGCA+AGG + chr7_2:84255749-84255768 Msa1083970:CDS 50.0%
!! TTGCATGTGCTGGTTGGCAT+TGG - chr7_2:84256009-84256028 None:intergenic 50.0%
TACAGGGAAGCTGTTGAAGC+TGG + chr7_2:84256092-84256111 Msa1083970:intron 50.0%
! TGCAAGTGCGTCGGAAGCAT+CGG - chr7_2:84250847-84250866 None:intergenic 55.0%
CTTCCGACGCACTTGCAGTT+AGG + chr7_2:84250850-84250869 Msa1083970:CDS 55.0%
CTGCCTAACTGCAAGTGCGT+CGG - chr7_2:84250856-84250875 None:intergenic 55.0%
TTCCTCAACGCTGCTCGTAC+CGG + chr7_2:84250888-84250907 Msa1083970:CDS 55.0%
TGACCAGCAGCCCAAACCAA+CGG - chr7_2:84251716-84251735 None:intergenic 55.0%
CAAGCCAGCATTCTCCAGCA+AGG + chr7_2:84254066-84254085 Msa1083970:intron 55.0%
CAAGCCAGCATTCTCCAGCA+AGG + chr7_2:84254066-84254085 Msa1083970:intron 55.0%
!!! CGTTCCCCTCAGTTTTTGGC+TGG + chr7_2:84254781-84254800 Msa1083970:intron 55.0%
GAAGCTAGGTCAAGCTGAGC+AGG + chr7_2:84255509-84255528 Msa1083970:CDS 55.0%
TCCCCCTTGACATTTGCTCC+AGG + chr7_2:84255641-84255660 Msa1083970:intron 55.0%
!! GCAAGTGCGTCGGAAGCATC+GGG - chr7_2:84250846-84250865 None:intergenic 60.0%
!! ACACCGTTGGTTTGGGCTGC+TGG + chr7_2:84251710-84251729 Msa1083970:CDS 60.0%
GCAGCTGGAAGGGGAAATCG+TGG + chr7_2:84253652-84253671 Msa1083970:CDS 60.0%
! CGCAGCCTTGCGTTTGTTGC+TGG + chr7_2:84255599-84255618 Msa1083970:intron 60.0%
TGCCGGTACGAGCAGCGTTG+AGG - chr7_2:84250893-84250912 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 84250734 84256473 84250734 ID=Msa1083970;Name=Msa1083970
chr7_2 mRNA 84250734 84256473 84250734 ID=Msa1083970-mRNA-1;Parent=Msa1083970;Name=Msa1083970-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.90|0.75|1|0.81|0.75|12|322|477
chr7_2 exon 84250734 84250757 84250734 ID=Msa1083970-mRNA-1:exon:22417;Parent=Msa1083970-mRNA-1
chr7_2 exon 84250804 84250930 84250804 ID=Msa1083970-mRNA-1:exon:22418;Parent=Msa1083970-mRNA-1
chr7_2 exon 84251016 84251318 84251016 ID=Msa1083970-mRNA-1:exon:22419;Parent=Msa1083970-mRNA-1
chr7_2 exon 84251642 84251781 84251642 ID=Msa1083970-mRNA-1:exon:22420;Parent=Msa1083970-mRNA-1
chr7_2 exon 84252468 84252554 84252468 ID=Msa1083970-mRNA-1:exon:22421;Parent=Msa1083970-mRNA-1
chr7_2 exon 84253233 84253358 84253233 ID=Msa1083970-mRNA-1:exon:22422;Parent=Msa1083970-mRNA-1
chr7_2 exon 84253628 84253780 84253628 ID=Msa1083970-mRNA-1:exon:22423;Parent=Msa1083970-mRNA-1
chr7_2 exon 84254467 84254541 84254467 ID=Msa1083970-mRNA-1:exon:22424;Parent=Msa1083970-mRNA-1
chr7_2 exon 84255104 84255205 84255104 ID=Msa1083970-mRNA-1:exon:22425;Parent=Msa1083970-mRNA-1
chr7_2 exon 84255450 84255613 84255450 ID=Msa1083970-mRNA-1:exon:22426;Parent=Msa1083970-mRNA-1
chr7_2 exon 84255713 84255790 84255713 ID=Msa1083970-mRNA-1:exon:22427;Parent=Msa1083970-mRNA-1
chr7_2 exon 84256097 84256473 84256097 ID=Msa1083970-mRNA-1:exon:22428;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84250734 84250757 84250734 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84250804 84250930 84250804 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84251016 84251318 84251016 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84251642 84251781 84251642 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84252468 84252554 84252468 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84253233 84253358 84253233 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84253628 84253780 84253628 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84254467 84254541 84254467 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84255104 84255205 84255104 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84255450 84255613 84255450 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84255713 84255790 84255713 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 CDS 84256097 84256151 84256097 ID=Msa1083970-mRNA-1:cds;Parent=Msa1083970-mRNA-1
chr7_2 three_prime_UTR 84256152 84256473 84256152 ID=Msa1083970-mRNA-1:three_prime_utr;Parent=Msa1083970-mRNA-1
Gene Sequence

>Msa1083970

GAATTGTTTCAACTTTCAACACAGGGTTTTGGTTTTGCATTACAGATTGTTCTCGATATGGCTCCCGATGCTTCCGACGCACTTGCAGTTAGGCAGAAAGTTCAACACTTCCTCAACGCTGCTCGTACCGGCAATCTCGATCTCTTAAAGAAATTTGCGGAACAATTAGACGAGGGCAAAGATTTATCCAAAACAGTGGAAGCAATTAAAGATGCAAACAAGCGTGGTGCACTTCATTTTGCTGCTCTTGAAGGACAAACTCAGATTTGCAGTTATTTTGTTGAGGATTTGAAGCTTCGTATTGATGATAAAGACGAAGACGGTGAAACTGCTCTCATTCATGCTGCACGTCAGGGACACACTGCCACTGCTAAGTATCTTATTGATCATGGTGCTGATCCTACCATTGCTAGCAATTTAGGAACCACGGCTTTGCATCATTCTGCTGGAATAGGAGACACGGATTTACTTGAGCATTTGCTGTCCAGAGGAGTTAATCCTGACTTAGAAAGTGATTCGGGAACACCGTTGGTTTGGGCTGCTGGTCATGCTCAAGAAGCTGCTGTCACTGTTCTATTAAAACATGGTGCAAATCCCAATGCTGAAACTGATGATGGCATTACCCCACTCATTTCATCTGTTGCAGCTGATTCTTTGGCATGCTTAGAGCTGTTAATACAGGCAGGTGCTAAAGTAAATGTTAGTGCTGGTGGAGCAACTCCTTTGCACATTGCAGCTGATAATGGAAGTCTAGAACTTATAAATTCCCTGTTGAAAGCAGGAACTGATCCTAATGTCTCTGACGAGGATGGTGTTAAGCCAATACAGGTTGCAGCTGGAAGGGGAAATCGTGGAGCTGTTGAGATATTGTTCCCCGTGACATCCAAACTTGATGTTATTCCTTCTTGGACTATTGATGGGATACTTGAGCATGTGCAATCAGAAAGTAAAAAGCAGCAGGATGAATCGCTAAATGTTAAAGAAAATAACCGGTCTGTGGATGCTGCTGTTTCTCGAGAGCAAAATATCCCTGAGGTGTCACCTGAAGCCAAAAAGAGAGCAGCAGAATCAAAATCAAGAGGGGATGAGGCTTTTAAAAGGAATGACTATCATACGGCTATAGATTCCTATACACAAGCAATTGATTTGAATCCCAGCGATGGTACATTGCATTCAAATAGAAGTCTATGTTGGATGAAGCTAGGTCAAGCTGAGCAGGCTTTAGCTGATGCAAAGGCATGTAGAGCATTAAGACCAGATTGGTCCAAAGCTTGTTATAGGGAAGGCGCAGCCTTGCGTTTGTTTGATGAAGCTGCAAATGCTTTTTACGAGGGAGTAACACTTGACCCTGAGAGCAAGGAGCTTGTAAATGCGTTCAGGGAAGCTGTTGAAGCTGGAAGAAAATTTCATGGCACAACCAAAGATAAACCGTAG

Protein sequence

>Msa1083970

ELFQLSTQGFGFALQIVLDMAPDASDALAVRQKVQHFLNAARTGNLDLLKKFAEQLDEGKDLSKTVEAIKDANKRGALHFAALEGQTQICSYFVEDLKLRIDDKDEDGETALIHAARQGHTATAKYLIDHGADPTIASNLGTTALHHSAGIGDTDLLEHLLSRGVNPDLESDSGTPLVWAAGHAQEAAVTVLLKHGANPNAETDDGITPLISSVAADSLACLELLIQAGAKVNVSAGGATPLHIAADNGSLELINSLLKAGTDPNVSDEDGVKPIQVAAGRGNRGAVEILFPVTSKLDVIPSWTIDGILEHVQSESKKQQDESLNVKENNRSVDAAVSREQNIPEVSPEAKKRAAESKSRGDEAFKRNDYHTAIDSYTQAIDLNPSDGTLHSNRSLCWMKLGQAEQALADAKACRALRPDWSKACYREGAALRLFDEAANAFYEGVTLDPESKELVNAFREAVEAGRKFHGTTKDKP*