Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208060 | XP_039686514.1 | 88.452 | 407 | 26 | 2 | 1 | 406 | 1 | 387 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208060 | sp|Q9FG14|MYOB7_ARATH | 53.535 | 99 | 46 | 0 | 21 | 119 | 76 | 174 | 2.39e-23 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208060 | A0A396JC32 | 88.452 | 407 | 26 | 2 | 1 | 406 | 1 | 387 | 0.0 | 724 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208060 | Msa1034450 | 0.803466 | 3.439068e-49 | -8.615850e-47 |
| Msa0208060 | Msa1074200 | 0.807757 | 4.324559e-50 | -8.615850e-47 |
| Msa0208060 | Msa1114670 | 0.827818 | 1.267946e-54 | -8.615850e-47 |
| Msa0208060 | Msa1133700 | 0.801353 | 9.371508e-49 | -8.615850e-47 |
| Msa0208060 | Msa1136760 | 0.808130 | 3.603073e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208060 | MtrunA17_Chr2g0307041 | 88.452 | 407 | 26 | 2 | 1 | 406 | 1 | 387 | 0.0 | 724 |
| Msa0208060 | MtrunA17_Chr4g0073651 | 47.403 | 462 | 189 | 14 | 12 | 429 | 2 | 453 | 5.89e-102 | 312 |
| Msa0208060 | MtrunA17_Chr1g0176391 | 52.525 | 99 | 47 | 0 | 21 | 119 | 67 | 165 | 7.26e-20 | 92.0 |
| Msa0208060 | MtrunA17_Chr7g0268041 | 50.485 | 103 | 51 | 0 | 17 | 119 | 68 | 170 | 2.91e-18 | 87.0 |
| Msa0208060 | MtrunA17_Chr4g0049631 | 42.683 | 82 | 47 | 0 | 34 | 115 | 318 | 399 | 1.14e-13 | 72.8 |
| Msa0208060 | MtrunA17_Chr1g0184441 | 46.512 | 86 | 46 | 0 | 27 | 112 | 541 | 626 | 4.14e-13 | 71.6 |
| Msa0208060 | MtrunA17_Chr3g0093241 | 49.438 | 89 | 45 | 0 | 30 | 118 | 345 | 433 | 3.12e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208060 | AT5G57830.1 | 33.580 | 405 | 195 | 8 | 18 | 412 | 18 | 358 | 4.75e-38 | 143 |
| Msa0208060 | AT4G30830.1 | 35.751 | 193 | 99 | 4 | 23 | 207 | 22 | 197 | 3.84e-28 | 115 |
| Msa0208060 | AT4G30830.2 | 35.751 | 193 | 99 | 4 | 23 | 207 | 22 | 197 | 3.84e-28 | 115 |
| Msa0208060 | AT5G06560.1 | 53.535 | 99 | 46 | 0 | 21 | 119 | 76 | 174 | 2.42e-24 | 106 |
| Msa0208060 | AT2G24140.2 | 53.061 | 98 | 46 | 0 | 22 | 119 | 22 | 119 | 3.02e-24 | 103 |
| Msa0208060 | AT2G24140.3 | 53.061 | 98 | 46 | 0 | 22 | 119 | 22 | 119 | 3.02e-24 | 103 |
| Msa0208060 | AT3G54740.8 | 49.000 | 100 | 51 | 0 | 21 | 120 | 28 | 127 | 1.30e-22 | 99.8 |
| Msa0208060 | AT3G54740.1 | 49.000 | 100 | 51 | 0 | 21 | 120 | 28 | 127 | 1.30e-22 | 99.8 |
| Msa0208060 | AT3G54740.7 | 49.000 | 100 | 51 | 0 | 21 | 120 | 28 | 127 | 1.30e-22 | 99.8 |
| Msa0208060 | AT3G54740.4 | 49.000 | 100 | 51 | 0 | 21 | 120 | 28 | 127 | 1.30e-22 | 99.8 |
| Msa0208060 | AT3G54740.3 | 49.495 | 99 | 50 | 0 | 21 | 119 | 76 | 174 | 1.73e-22 | 100 |
| Msa0208060 | AT3G54740.6 | 49.495 | 99 | 50 | 0 | 21 | 119 | 76 | 174 | 1.73e-22 | 100 |
| Msa0208060 | AT3G54740.2 | 49.495 | 99 | 50 | 0 | 21 | 119 | 76 | 174 | 1.73e-22 | 100 |
| Msa0208060 | AT3G54740.5 | 49.495 | 99 | 50 | 0 | 21 | 119 | 76 | 174 | 1.73e-22 | 100 |
| Msa0208060 | AT2G24140.4 | 55.882 | 68 | 30 | 0 | 52 | 119 | 1 | 68 | 1.15e-16 | 80.5 |
| Msa0208060 | AT2G24140.1 | 55.882 | 68 | 30 | 0 | 52 | 119 | 1 | 68 | 1.15e-16 | 80.5 |
| Msa0208060 | AT3G11850.2 | 40.000 | 100 | 60 | 0 | 21 | 120 | 67 | 166 | 2.72e-16 | 81.6 |
| Msa0208060 | AT3G11850.1 | 40.000 | 100 | 60 | 0 | 21 | 120 | 67 | 166 | 2.72e-16 | 81.6 |
| Msa0208060 | AT5G16720.1 | 43.750 | 96 | 54 | 0 | 21 | 116 | 362 | 457 | 1.65e-15 | 79.7 |
| Msa0208060 | AT1G70750.1 | 41.935 | 93 | 54 | 0 | 23 | 115 | 420 | 512 | 1.10e-12 | 70.9 |
| Msa0208060 | AT1G74830.1 | 46.154 | 91 | 46 | 1 | 30 | 120 | 316 | 403 | 1.29e-12 | 70.1 |
| Msa0208060 | AT2G30690.1 | 37.815 | 119 | 66 | 2 | 2 | 114 | 595 | 711 | 1.61e-11 | 67.0 |
| Msa0208060 | AT2G30690.2 | 37.815 | 119 | 66 | 2 | 2 | 114 | 595 | 711 | 1.61e-11 | 67.0 |
| Msa0208060 | AT1G08800.2 | 42.045 | 88 | 51 | 0 | 27 | 114 | 901 | 988 | 5.68e-11 | 65.5 |
| Msa0208060 | AT1G08800.4 | 42.045 | 88 | 51 | 0 | 27 | 114 | 901 | 988 | 5.68e-11 | 65.5 |
| Msa0208060 | AT1G08800.3 | 42.045 | 88 | 51 | 0 | 27 | 114 | 901 | 988 | 5.68e-11 | 65.5 |
| Msa0208060 | AT1G08800.1 | 42.045 | 88 | 51 | 0 | 27 | 114 | 901 | 988 | 5.68e-11 | 65.5 |
Find 88 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGAATGTTTCTGTTTA+TGG | 0.115433 | 2_1:+42271302 | Msa0208060:CDS |
| CATAGTTTCACTTCTGATTT+AGG | 0.142846 | 2_1:+42271335 | Msa0208060:CDS |
| ATAACTGAATTCGTGCTTTC+CGG | 0.186650 | 2_1:-42270478 | None:intergenic |
| ATCTCTCAAGTTTCAATTAC+AGG | 0.220907 | 2_1:+42269924 | Msa0208060:CDS |
| CCTCCTTTATTTCTCAAGTT+TGG | 0.272159 | 2_1:-42270267 | None:intergenic |
| TAGAGTTTAATTTGTTTGTT+TGG | 0.305441 | 2_1:-42270344 | None:intergenic |
| ATTTGAATGTTTCTGTTTAT+GGG | 0.311357 | 2_1:+42271303 | Msa0208060:CDS |
| CGTGCTTTCCGGTGGCTTGT+GGG | 0.313159 | 2_1:-42270467 | None:intergenic |
| ATTTACTACTTCATATGAAT+TGG | 0.365872 | 2_1:-42270367 | None:intergenic |
| ATGACATGTGGCTTTGAATC+AGG | 0.369692 | 2_1:+42270744 | Msa0208060:CDS |
| GGACCAAACTTGAGAAATAA+AGG | 0.379426 | 2_1:+42270264 | Msa0208060:CDS |
| ATCAATCAAAGGTTAGTCTA+TGG | 0.385961 | 2_1:-42271379 | None:intergenic |
| TCGTGCTTTCCGGTGGCTTG+TGG | 0.419348 | 2_1:-42270468 | None:intergenic |
| CACACACCAAGCTAGGTTCC+TGG | 0.440723 | 2_1:-42270158 | None:intergenic |
| GTTTCAATTACAGGCTTACA+AGG | 0.445734 | 2_1:+42269933 | Msa0208060:CDS |
| AGAGAAGGCCATGGTGGAGA+TGG | 0.452521 | 2_1:+42269798 | Msa0208060:CDS |
| CACAGCAGCAAGAGAAGCAA+TGG | 0.454545 | 2_1:+42269753 | Msa0208060:CDS |
| CATTGCTTCTCTTGCTGCTG+TGG | 0.454872 | 2_1:-42269752 | None:intergenic |
| CAAATACAAGTGATCAAAAC+GGG | 0.455981 | 2_1:+42270013 | Msa0208060:CDS |
| CCTAGCTTGGTGTGTGGAAG+TGG | 0.458814 | 2_1:+42270165 | Msa0208060:CDS |
| AAAGGCAGAGAGCTAGTAGA+AGG | 0.462861 | 2_1:+42270712 | Msa0208060:CDS |
| AAAAGCTTCGAGGGTGGCTT+CGG | 0.467471 | 2_1:-42269866 | None:intergenic |
| AAGGACAAACTTGTGAGCTT+AGG | 0.472100 | 2_1:+42269952 | Msa0208060:CDS |
| AGAAGTGATGTATCAGTAGT+AGG | 0.476141 | 2_1:+42269649 | Msa0208060:CDS |
| GTGGAACTCTAGATTCATAC+TGG | 0.479508 | 2_1:+42270184 | Msa0208060:CDS |
| GGCAAGTCAGTTCAAGAGAA+TGG | 0.479526 | 2_1:+42269822 | Msa0208060:CDS |
| ATGATCAGAAAATGCTGTAC+TGG | 0.490392 | 2_1:-42270409 | None:intergenic |
| GCAGAAGTTGTATGTGGAGT+TGG | 0.490581 | 2_1:+42269708 | Msa0208060:CDS |
| GGGATAAGAAAGCTTGAGAA+AGG | 0.501960 | 2_1:+42270507 | Msa0208060:CDS |
| CCACTTCCACACACCAAGCT+AGG | 0.505953 | 2_1:-42270165 | None:intergenic |
| TCAAATACAAGTGATCAAAA+CGG | 0.506951 | 2_1:+42270012 | Msa0208060:CDS |
| AAGATGATCAGAGAATTGTT+AGG | 0.508161 | 2_1:+42270685 | Msa0208060:CDS |
| AAAGTTCTTCAAAAGCTTCG+AGG | 0.515841 | 2_1:-42269876 | None:intergenic |
| AGCTCAAGTTTCGAGTGACC+AGG | 0.516950 | 2_1:+42270140 | Msa0208060:CDS |
| AGAGAATTGTTAGGCTTCAA+AGG | 0.519776 | 2_1:+42270694 | Msa0208060:CDS |
| TTACATTAGACACACTATGT+AGG | 0.522729 | 2_1:+42271278 | Msa0208060:intron |
| AAGGGAACGGTGACTATCGC+TGG | 0.532087 | 2_1:+42270621 | Msa0208060:CDS |
| GGATAAGAAAGCTTGAGAAA+GGG | 0.533883 | 2_1:+42270508 | Msa0208060:CDS |
| GAGAGAGTGTTGATCGGAAG+GGG | 0.534648 | 2_1:+42270100 | Msa0208060:CDS |
| ATTTCAGATTCTAACAACAT+AGG | 0.534927 | 2_1:+42270243 | Msa0208060:CDS |
| TGTGGAGTTGGATGAGGAAA+GGG | 0.535394 | 2_1:+42269720 | Msa0208060:CDS |
| GAGAGAGAGTGTTGATCGGA+AGG | 0.543095 | 2_1:+42270098 | Msa0208060:CDS |
| AGAATCTGTGTCTGAGGGAA+TGG | 0.546439 | 2_1:+42270563 | Msa0208060:CDS |
| GTTGTATGTGGAGTTGGATG+AGG | 0.547907 | 2_1:+42269714 | Msa0208060:CDS |
| AAAACTAGAATCTGTGTCTG+AGG | 0.548604 | 2_1:+42270557 | Msa0208060:CDS |
| AGAATGGCAGAAGAGAAGAT+AGG | 0.553739 | 2_1:+42269838 | Msa0208060:CDS |
| AAGTTCTTCAAAAGCTTCGA+GGG | 0.555984 | 2_1:-42269875 | None:intergenic |
| TGACATGTGGCTTTGAATCA+GGG | 0.558091 | 2_1:+42270745 | Msa0208060:CDS |
| ACATGATGCAGACAAGGGAA+AGG | 0.564199 | 2_1:+42270602 | Msa0208060:CDS |
| AGAGAGTGTTGATCGGAAGG+GGG | 0.566867 | 2_1:+42270101 | Msa0208060:CDS |
| GACATGATACTGCGTTTACA+AGG | 0.572241 | 2_1:+42269775 | Msa0208060:CDS |
| CATGATGCAGACAAGGGAAA+GGG | 0.573658 | 2_1:+42270603 | Msa0208060:CDS |
| GAAGGCCATGGTGGAGATGG+AGG | 0.576570 | 2_1:+42269801 | Msa0208060:CDS |
| GAGTGACCAGGAACCTAGCT+TGG | 0.579009 | 2_1:+42270152 | Msa0208060:CDS |
| CACGAATTCAGTTATAGCGA+AGG | 0.579490 | 2_1:+42270486 | Msa0208060:CDS |
| CTTCGAGGGTGGCTTCGGCA+TGG | 0.580049 | 2_1:-42269861 | None:intergenic |
| TGGCCAGAAGAAAGAAAAGA+TGG | 0.580704 | 2_1:+42270641 | Msa0208060:CDS |
| CTCTGAGAGAGAGTGTTGAT+CGG | 0.584888 | 2_1:+42270094 | Msa0208060:CDS |
| ACTGAATTCGTGCTTTCCGG+TGG | 0.589291 | 2_1:-42270475 | None:intergenic |
| TTCTTCAAAAGCTTCGAGGG+TGG | 0.594607 | 2_1:-42269872 | None:intergenic |
| TTTGAAGTCCCACAAGCCAC+CGG | 0.596974 | 2_1:+42270459 | Msa0208060:CDS |
| AGAGAGAGTGTTGATCGGAA+GGG | 0.599941 | 2_1:+42270099 | Msa0208060:CDS |
| CACAACATCATCCACAGCGG+TGG | 0.602686 | 2_1:-42270859 | None:intergenic |
| AAACTAGAATCTGTGTCTGA+GGG | 0.604202 | 2_1:+42270558 | Msa0208060:CDS |
| ACTTGCCTCCATCTCCACCA+TGG | 0.608504 | 2_1:-42269806 | None:intergenic |
| ACGAATTCAGTTATAGCGAA+GGG | 0.609860 | 2_1:+42270487 | Msa0208060:CDS |
| ATGTGGAGTTGGATGAGGAA+AGG | 0.609938 | 2_1:+42269719 | Msa0208060:CDS |
| TGTGGCTTTGAATCAGGGTA+TGG | 0.613410 | 2_1:+42270750 | Msa0208060:CDS |
| GGTATGGTGAAGAGCAGTTG+AGG | 0.614053 | 2_1:+42270766 | Msa0208060:CDS |
| TTTAAACATGATGCAGACAA+GGG | 0.615907 | 2_1:+42270597 | Msa0208060:CDS |
| ACTGCGTTTACAAGGAGAGA+AGG | 0.621148 | 2_1:+42269783 | Msa0208060:CDS |
| TCAACACTCTCTCTCAGAGT+CGG | 0.622731 | 2_1:-42270090 | None:intergenic |
| TGCAGACAAGGGAAAGGGAA+CGG | 0.623024 | 2_1:+42270608 | Msa0208060:CDS |
| ACGGGAGCACGGTTATGAGA+AGG | 0.624797 | 2_1:+42270031 | Msa0208060:CDS |
| AGTAAGATAAACTCTGAATG+TGG | 0.625640 | 2_1:+42270321 | Msa0208060:CDS |
| ATCAGAAAATGCTGTACTGG+CGG | 0.628541 | 2_1:-42270406 | None:intergenic |
| TCAGAAAATGCTGTACTGGC+GGG | 0.628906 | 2_1:-42270405 | None:intergenic |
| AAGTGATCAAAACGGGAGCA+CGG | 0.633691 | 2_1:+42270020 | Msa0208060:CDS |
| CCAAACTTGAGAAATAAAGG+AGG | 0.635577 | 2_1:+42270267 | Msa0208060:CDS |
| AGGTATCATGACATGACATG+TGG | 0.668252 | 2_1:+42270732 | Msa0208060:CDS |
| ACTTGAGAAATAAAGGAGGG+AGG | 0.674685 | 2_1:+42270271 | Msa0208060:CDS |
| ACAAGGAGAGAAGGCCATGG+TGG | 0.683857 | 2_1:+42269792 | Msa0208060:CDS |
| CAGGAACCTAGCTTGGTGTG+TGG | 0.684270 | 2_1:+42270159 | Msa0208060:CDS |
| TTTACAAGGAGAGAAGGCCA+TGG | 0.696681 | 2_1:+42269789 | Msa0208060:CDS |
| CAAACTTGAGAAATAAAGGA+GGG | 0.697263 | 2_1:+42270268 | Msa0208060:CDS |
| GCTTGAGAAAGGGAATTCTG+TGG | 0.704866 | 2_1:+42270518 | Msa0208060:CDS |
| TGTATCAGTAGTAGGCGCGA+CGG | 0.705304 | 2_1:+42269657 | Msa0208060:CDS |
| AGACACAACATCATCCACAG+CGG | 0.826275 | 2_1:-42270862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATTAAAAAAAATTCA+TGG | - | chr2_1:42270966-42270985 | None:intergenic | 10.0% |
| !! | AAGAATTCATAAAAAAAAAA+GGG | - | chr2_1:42271050-42271069 | None:intergenic | 10.0% |
| !! | ATCAAATTAAAAAAAATTCA+TGG | - | chr2_1:42270966-42270985 | None:intergenic | 10.0% |
| !! | AAGAATTCATAAAAAAAAAA+GGG | - | chr2_1:42271050-42271069 | None:intergenic | 10.0% |
| !! | CAAGAATTCATAAAAAAAAA+AGG | - | chr2_1:42271051-42271070 | None:intergenic | 15.0% |
| !!! | ATTAGTTCTTATTATTTCAA+AGG | - | chr2_1:42271100-42271119 | None:intergenic | 15.0% |
| !! | CAAGAATTCATAAAAAAAAA+AGG | - | chr2_1:42271051-42271070 | None:intergenic | 15.0% |
| !!! | ATTAGTTCTTATTATTTCAA+AGG | - | chr2_1:42271100-42271119 | None:intergenic | 15.0% |
| !!! | TAGAGTTTAATTTGTTTGTT+TGG | - | chr2_1:42270347-42270366 | None:intergenic | 20.0% |
| !! | ATTTACTACTTCATATGAAT+TGG | - | chr2_1:42270370-42270389 | None:intergenic | 20.0% |
| !! | TTTATGAATTCTTGAATTGT+TGG | + | chr2_1:42271057-42271076 | Msa0208060:intron | 20.0% |
| !! | TTCTTATTATTTCAAAGGAA+AGG | - | chr2_1:42271095-42271114 | None:intergenic | 20.0% |
| !! | AATGACTAATTTATATGAAC+AGG | + | chr2_1:42271117-42271136 | Msa0208060:intron | 20.0% |
| !!! | AATTTGAATGTTTCTGTTTA+TGG | + | chr2_1:42271302-42271321 | Msa0208060:CDS | 20.0% |
| !!! | ATTTGAATGTTTCTGTTTAT+GGG | + | chr2_1:42271303-42271322 | Msa0208060:CDS | 20.0% |
| !!! | TAGAGTTTAATTTGTTTGTT+TGG | - | chr2_1:42270347-42270366 | None:intergenic | 20.0% |
| !! | ATTTACTACTTCATATGAAT+TGG | - | chr2_1:42270370-42270389 | None:intergenic | 20.0% |
| !! | TTTATGAATTCTTGAATTGT+TGG | + | chr2_1:42271057-42271076 | Msa0208060:intron | 20.0% |
| !! | TTCTTATTATTTCAAAGGAA+AGG | - | chr2_1:42271095-42271114 | None:intergenic | 20.0% |
| !! | AATGACTAATTTATATGAAC+AGG | + | chr2_1:42271117-42271136 | Msa0208060:intron | 20.0% |
| !!! | AATTTGAATGTTTCTGTTTA+TGG | + | chr2_1:42271302-42271321 | Msa0208060:CDS | 20.0% |
| !!! | ATTTGAATGTTTCTGTTTAT+GGG | + | chr2_1:42271303-42271322 | Msa0208060:CDS | 20.0% |
| !! | ACTTTTGTATGAAAAAGAGA+TGG | + | chr2_1:42269894-42269913 | Msa0208060:CDS | 25.0% |
| ! | TCAAATACAAGTGATCAAAA+CGG | + | chr2_1:42270012-42270031 | Msa0208060:CDS | 25.0% |
| !!! | AATCTTTTTAAAGCGAATTG+GGG | - | chr2_1:42270070-42270089 | None:intergenic | 25.0% |
| !!! | GAATCTTTTTAAAGCGAATT+GGG | - | chr2_1:42270071-42270090 | None:intergenic | 25.0% |
| ! | ATTTCAGATTCTAACAACAT+AGG | + | chr2_1:42270243-42270262 | Msa0208060:CDS | 25.0% |
| ! | AGATTATATACATTACCTCT+TGG | - | chr2_1:42270899-42270918 | None:intergenic | 25.0% |
| ! | AAGAGGTAATGTATATAATC+TGG | + | chr2_1:42270898-42270917 | Msa0208060:intron | 25.0% |
| !! | ACTTTTGTATGAAAAAGAGA+TGG | + | chr2_1:42269894-42269913 | Msa0208060:CDS | 25.0% |
| ! | TCAAATACAAGTGATCAAAA+CGG | + | chr2_1:42270012-42270031 | Msa0208060:CDS | 25.0% |
| !!! | AATCTTTTTAAAGCGAATTG+GGG | - | chr2_1:42270070-42270089 | None:intergenic | 25.0% |
| !!! | GAATCTTTTTAAAGCGAATT+GGG | - | chr2_1:42270071-42270090 | None:intergenic | 25.0% |
| ! | ATTTCAGATTCTAACAACAT+AGG | + | chr2_1:42270243-42270262 | Msa0208060:CDS | 25.0% |
| ! | AGATTATATACATTACCTCT+TGG | - | chr2_1:42270899-42270918 | None:intergenic | 25.0% |
| ! | AAGAGGTAATGTATATAATC+TGG | + | chr2_1:42270898-42270917 | Msa0208060:intron | 25.0% |
| ATCTCTCAAGTTTCAATTAC+AGG | + | chr2_1:42269924-42269943 | Msa0208060:CDS | 30.0% | |
| CAAATACAAGTGATCAAAAC+GGG | + | chr2_1:42270013-42270032 | Msa0208060:CDS | 30.0% | |
| !!! | ATCTTTTTAAAGCGAATTGG+GGG | - | chr2_1:42270069-42270088 | None:intergenic | 30.0% |
| !!! | GGAATCTTTTTAAAGCGAAT+TGG | - | chr2_1:42270072-42270091 | None:intergenic | 30.0% |
| CAAACTTGAGAAATAAAGGA+GGG | + | chr2_1:42270268-42270287 | Msa0208060:CDS | 30.0% | |
| AGTAAGATAAACTCTGAATG+TGG | + | chr2_1:42270321-42270340 | Msa0208060:CDS | 30.0% | |
| ! | TTTTAAACATGATGCAGACA+AGG | + | chr2_1:42270596-42270615 | Msa0208060:CDS | 30.0% |
| TTTAAACATGATGCAGACAA+GGG | + | chr2_1:42270597-42270616 | Msa0208060:CDS | 30.0% | |
| ! | AATCCATCTTTTCTTTCTTC+TGG | - | chr2_1:42270647-42270666 | None:intergenic | 30.0% |
| AAGATGATCAGAGAATTGTT+AGG | + | chr2_1:42270685-42270704 | Msa0208060:CDS | 30.0% | |
| AAAAATTCATGGATGCATGT+AGG | - | chr2_1:42270955-42270974 | None:intergenic | 30.0% | |
| ACACAGATTTATGTTGGATA+TGG | + | chr2_1:42271229-42271248 | Msa0208060:intron | 30.0% | |
| TTACATTAGACACACTATGT+AGG | + | chr2_1:42271278-42271297 | Msa0208060:intron | 30.0% | |
| CATAGTTTCACTTCTGATTT+AGG | + | chr2_1:42271335-42271354 | Msa0208060:CDS | 30.0% | |
| ATCTCTCAAGTTTCAATTAC+AGG | + | chr2_1:42269924-42269943 | Msa0208060:CDS | 30.0% | |
| CAAATACAAGTGATCAAAAC+GGG | + | chr2_1:42270013-42270032 | Msa0208060:CDS | 30.0% | |
| !!! | ATCTTTTTAAAGCGAATTGG+GGG | - | chr2_1:42270069-42270088 | None:intergenic | 30.0% |
| !!! | GGAATCTTTTTAAAGCGAAT+TGG | - | chr2_1:42270072-42270091 | None:intergenic | 30.0% |
| CAAACTTGAGAAATAAAGGA+GGG | + | chr2_1:42270268-42270287 | Msa0208060:CDS | 30.0% | |
| AGTAAGATAAACTCTGAATG+TGG | + | chr2_1:42270321-42270340 | Msa0208060:CDS | 30.0% | |
| ! | TTTTAAACATGATGCAGACA+AGG | + | chr2_1:42270596-42270615 | Msa0208060:CDS | 30.0% |
| TTTAAACATGATGCAGACAA+GGG | + | chr2_1:42270597-42270616 | Msa0208060:CDS | 30.0% | |
| ! | AATCCATCTTTTCTTTCTTC+TGG | - | chr2_1:42270647-42270666 | None:intergenic | 30.0% |
| AAGATGATCAGAGAATTGTT+AGG | + | chr2_1:42270685-42270704 | Msa0208060:CDS | 30.0% | |
| AAAAATTCATGGATGCATGT+AGG | - | chr2_1:42270955-42270974 | None:intergenic | 30.0% | |
| ACACAGATTTATGTTGGATA+TGG | + | chr2_1:42271229-42271248 | Msa0208060:intron | 30.0% | |
| TTACATTAGACACACTATGT+AGG | + | chr2_1:42271278-42271297 | Msa0208060:intron | 30.0% | |
| CATAGTTTCACTTCTGATTT+AGG | + | chr2_1:42271335-42271354 | Msa0208060:CDS | 30.0% | |
| AGAAGTGATGTATCAGTAGT+AGG | + | chr2_1:42269649-42269668 | Msa0208060:CDS | 35.0% | |
| ! | ACTTTTGCAGAAGTTGTATG+TGG | + | chr2_1:42269702-42269721 | Msa0208060:CDS | 35.0% |
| AAGTTCTTCAAAAGCTTCGA+GGG | - | chr2_1:42269878-42269897 | None:intergenic | 35.0% | |
| AAAGTTCTTCAAAAGCTTCG+AGG | - | chr2_1:42269879-42269898 | None:intergenic | 35.0% | |
| GTTTCAATTACAGGCTTACA+AGG | + | chr2_1:42269933-42269952 | Msa0208060:CDS | 35.0% | |
| GGACCAAACTTGAGAAATAA+AGG | + | chr2_1:42270264-42270283 | Msa0208060:CDS | 35.0% | |
| ! | CCTCCTTTATTTCTCAAGTT+TGG | - | chr2_1:42270270-42270289 | None:intergenic | 35.0% |
| CCAAACTTGAGAAATAAAGG+AGG | + | chr2_1:42270267-42270286 | Msa0208060:CDS | 35.0% | |
| ATGATCAGAAAATGCTGTAC+TGG | - | chr2_1:42270412-42270431 | None:intergenic | 35.0% | |
| ATAACTGAATTCGTGCTTTC+CGG | - | chr2_1:42270481-42270500 | None:intergenic | 35.0% | |
| ACGAATTCAGTTATAGCGAA+GGG | + | chr2_1:42270487-42270506 | Msa0208060:CDS | 35.0% | |
| GGATAAGAAAGCTTGAGAAA+GGG | + | chr2_1:42270508-42270527 | Msa0208060:CDS | 35.0% | |
| AAAACTAGAATCTGTGTCTG+AGG | + | chr2_1:42270557-42270576 | Msa0208060:CDS | 35.0% | |
| AAACTAGAATCTGTGTCTGA+GGG | + | chr2_1:42270558-42270577 | Msa0208060:CDS | 35.0% | |
| AGAGAATTGTTAGGCTTCAA+AGG | + | chr2_1:42270694-42270713 | Msa0208060:CDS | 35.0% | |
| ! | GTCTTTTGAATTTCTCCAAG+AGG | + | chr2_1:42270881-42270900 | Msa0208060:CDS | 35.0% |
| ATGTAACGCAGTGAGTTTAT+AGG | - | chr2_1:42271198-42271217 | None:intergenic | 35.0% | |
| CTCAACACACAGATTTATGT+TGG | + | chr2_1:42271223-42271242 | Msa0208060:intron | 35.0% | |
| AGAAGTGATGTATCAGTAGT+AGG | + | chr2_1:42269649-42269668 | Msa0208060:CDS | 35.0% | |
| ! | ACTTTTGCAGAAGTTGTATG+TGG | + | chr2_1:42269702-42269721 | Msa0208060:CDS | 35.0% |
| AAGTTCTTCAAAAGCTTCGA+GGG | - | chr2_1:42269878-42269897 | None:intergenic | 35.0% | |
| AAAGTTCTTCAAAAGCTTCG+AGG | - | chr2_1:42269879-42269898 | None:intergenic | 35.0% | |
| GTTTCAATTACAGGCTTACA+AGG | + | chr2_1:42269933-42269952 | Msa0208060:CDS | 35.0% | |
| GGACCAAACTTGAGAAATAA+AGG | + | chr2_1:42270264-42270283 | Msa0208060:CDS | 35.0% | |
| ! | CCTCCTTTATTTCTCAAGTT+TGG | - | chr2_1:42270270-42270289 | None:intergenic | 35.0% |
| CCAAACTTGAGAAATAAAGG+AGG | + | chr2_1:42270267-42270286 | Msa0208060:CDS | 35.0% | |
| ATGATCAGAAAATGCTGTAC+TGG | - | chr2_1:42270412-42270431 | None:intergenic | 35.0% | |
| ATAACTGAATTCGTGCTTTC+CGG | - | chr2_1:42270481-42270500 | None:intergenic | 35.0% | |
| ACGAATTCAGTTATAGCGAA+GGG | + | chr2_1:42270487-42270506 | Msa0208060:CDS | 35.0% | |
| GGATAAGAAAGCTTGAGAAA+GGG | + | chr2_1:42270508-42270527 | Msa0208060:CDS | 35.0% | |
| AAAACTAGAATCTGTGTCTG+AGG | + | chr2_1:42270557-42270576 | Msa0208060:CDS | 35.0% | |
| AAACTAGAATCTGTGTCTGA+GGG | + | chr2_1:42270558-42270577 | Msa0208060:CDS | 35.0% | |
| AGAGAATTGTTAGGCTTCAA+AGG | + | chr2_1:42270694-42270713 | Msa0208060:CDS | 35.0% | |
| ! | GTCTTTTGAATTTCTCCAAG+AGG | + | chr2_1:42270881-42270900 | Msa0208060:CDS | 35.0% |
| ATGTAACGCAGTGAGTTTAT+AGG | - | chr2_1:42271198-42271217 | None:intergenic | 35.0% | |
| CTCAACACACAGATTTATGT+TGG | + | chr2_1:42271223-42271242 | Msa0208060:intron | 35.0% | |
| GACATGATACTGCGTTTACA+AGG | + | chr2_1:42269775-42269794 | Msa0208060:CDS | 40.0% | |
| AGAATGGCAGAAGAGAAGAT+AGG | + | chr2_1:42269838-42269857 | Msa0208060:CDS | 40.0% | |
| AAGGACAAACTTGTGAGCTT+AGG | + | chr2_1:42269952-42269971 | Msa0208060:CDS | 40.0% | |
| GTGGAACTCTAGATTCATAC+TGG | + | chr2_1:42270184-42270203 | Msa0208060:CDS | 40.0% | |
| ACTTGAGAAATAAAGGAGGG+AGG | + | chr2_1:42270271-42270290 | Msa0208060:CDS | 40.0% | |
| ATCAGAAAATGCTGTACTGG+CGG | - | chr2_1:42270409-42270428 | None:intergenic | 40.0% | |
| CACGAATTCAGTTATAGCGA+AGG | + | chr2_1:42270486-42270505 | Msa0208060:CDS | 40.0% | |
| GGGATAAGAAAGCTTGAGAA+AGG | + | chr2_1:42270507-42270526 | Msa0208060:CDS | 40.0% | |
| TGGCCAGAAGAAAGAAAAGA+TGG | + | chr2_1:42270641-42270660 | Msa0208060:CDS | 40.0% | |
| AGGTATCATGACATGACATG+TGG | + | chr2_1:42270732-42270751 | Msa0208060:CDS | 40.0% | |
| !! | ATGACATGTGGCTTTGAATC+AGG | + | chr2_1:42270744-42270763 | Msa0208060:CDS | 40.0% |
| !! | TGACATGTGGCTTTGAATCA+GGG | + | chr2_1:42270745-42270764 | Msa0208060:CDS | 40.0% |
| ! | AACAGGCAATGTTGCACTTT+TGG | + | chr2_1:42271134-42271153 | Msa0208060:intron | 40.0% |
| AGTTTATAGGTAGCACGAGA+TGG | - | chr2_1:42271185-42271204 | None:intergenic | 40.0% | |
| GACATGATACTGCGTTTACA+AGG | + | chr2_1:42269775-42269794 | Msa0208060:CDS | 40.0% | |
| AGAATGGCAGAAGAGAAGAT+AGG | + | chr2_1:42269838-42269857 | Msa0208060:CDS | 40.0% | |
| AAGGACAAACTTGTGAGCTT+AGG | + | chr2_1:42269952-42269971 | Msa0208060:CDS | 40.0% | |
| GTGGAACTCTAGATTCATAC+TGG | + | chr2_1:42270184-42270203 | Msa0208060:CDS | 40.0% | |
| ACTTGAGAAATAAAGGAGGG+AGG | + | chr2_1:42270271-42270290 | Msa0208060:CDS | 40.0% | |
| ATCAGAAAATGCTGTACTGG+CGG | - | chr2_1:42270409-42270428 | None:intergenic | 40.0% | |
| CACGAATTCAGTTATAGCGA+AGG | + | chr2_1:42270486-42270505 | Msa0208060:CDS | 40.0% | |
| GGGATAAGAAAGCTTGAGAA+AGG | + | chr2_1:42270507-42270526 | Msa0208060:CDS | 40.0% | |
| TGGCCAGAAGAAAGAAAAGA+TGG | + | chr2_1:42270641-42270660 | Msa0208060:CDS | 40.0% | |
| AGGTATCATGACATGACATG+TGG | + | chr2_1:42270732-42270751 | Msa0208060:CDS | 40.0% | |
| !! | ATGACATGTGGCTTTGAATC+AGG | + | chr2_1:42270744-42270763 | Msa0208060:CDS | 40.0% |
| !! | TGACATGTGGCTTTGAATCA+GGG | + | chr2_1:42270745-42270764 | Msa0208060:CDS | 40.0% |
| ! | AACAGGCAATGTTGCACTTT+TGG | + | chr2_1:42271134-42271153 | Msa0208060:intron | 40.0% |
| AGTTTATAGGTAGCACGAGA+TGG | - | chr2_1:42271185-42271204 | None:intergenic | 40.0% | |
| GCAGAAGTTGTATGTGGAGT+TGG | + | chr2_1:42269708-42269727 | Msa0208060:CDS | 45.0% | |
| GTTGTATGTGGAGTTGGATG+AGG | + | chr2_1:42269714-42269733 | Msa0208060:CDS | 45.0% | |
| ATGTGGAGTTGGATGAGGAA+AGG | + | chr2_1:42269719-42269738 | Msa0208060:CDS | 45.0% | |
| TGTGGAGTTGGATGAGGAAA+GGG | + | chr2_1:42269720-42269739 | Msa0208060:CDS | 45.0% | |
| ACTGCGTTTACAAGGAGAGA+AGG | + | chr2_1:42269783-42269802 | Msa0208060:CDS | 45.0% | |
| TTTACAAGGAGAGAAGGCCA+TGG | + | chr2_1:42269789-42269808 | Msa0208060:CDS | 45.0% | |
| GGCAAGTCAGTTCAAGAGAA+TGG | + | chr2_1:42269822-42269841 | Msa0208060:CDS | 45.0% | |
| TTCTTCAAAAGCTTCGAGGG+TGG | - | chr2_1:42269875-42269894 | None:intergenic | 45.0% | |
| AAGTGATCAAAACGGGAGCA+CGG | + | chr2_1:42270020-42270039 | Msa0208060:CDS | 45.0% | |
| TCAACACTCTCTCTCAGAGT+CGG | - | chr2_1:42270093-42270112 | None:intergenic | 45.0% | |
| !! | CTCTGAGAGAGAGTGTTGAT+CGG | + | chr2_1:42270094-42270113 | Msa0208060:CDS | 45.0% |
| !! | AGAGAGAGTGTTGATCGGAA+GGG | + | chr2_1:42270099-42270118 | Msa0208060:CDS | 45.0% |
| ! | TCAGAAAATGCTGTACTGGC+GGG | - | chr2_1:42270408-42270427 | None:intergenic | 45.0% |
| GCTTGAGAAAGGGAATTCTG+TGG | + | chr2_1:42270518-42270537 | Msa0208060:CDS | 45.0% | |
| AGAATCTGTGTCTGAGGGAA+TGG | + | chr2_1:42270563-42270582 | Msa0208060:CDS | 45.0% | |
| ACATGATGCAGACAAGGGAA+AGG | + | chr2_1:42270602-42270621 | Msa0208060:CDS | 45.0% | |
| CATGATGCAGACAAGGGAAA+GGG | + | chr2_1:42270603-42270622 | Msa0208060:CDS | 45.0% | |
| AAAGGCAGAGAGCTAGTAGA+AGG | + | chr2_1:42270712-42270731 | Msa0208060:CDS | 45.0% | |
| !! | TGTGGCTTTGAATCAGGGTA+TGG | + | chr2_1:42270750-42270769 | Msa0208060:CDS | 45.0% |
| ! | AGAGCAGTTGAGGCTTTTGA+AGG | + | chr2_1:42270776-42270795 | Msa0208060:CDS | 45.0% |
| AGACACAACATCATCCACAG+CGG | - | chr2_1:42270865-42270884 | None:intergenic | 45.0% | |
| CATGGATGCATGTAGGCAAT+AGG | - | chr2_1:42270948-42270967 | None:intergenic | 45.0% | |
| CTAAAGCTCCTGTATACGCA+GGG | - | chr2_1:42271015-42271034 | None:intergenic | 45.0% | |
| ACTAAAGCTCCTGTATACGC+AGG | - | chr2_1:42271016-42271035 | None:intergenic | 45.0% | |
| GCAGAAGTTGTATGTGGAGT+TGG | + | chr2_1:42269708-42269727 | Msa0208060:CDS | 45.0% | |
| GTTGTATGTGGAGTTGGATG+AGG | + | chr2_1:42269714-42269733 | Msa0208060:CDS | 45.0% | |
| ATGTGGAGTTGGATGAGGAA+AGG | + | chr2_1:42269719-42269738 | Msa0208060:CDS | 45.0% | |
| TGTGGAGTTGGATGAGGAAA+GGG | + | chr2_1:42269720-42269739 | Msa0208060:CDS | 45.0% | |
| ACTGCGTTTACAAGGAGAGA+AGG | + | chr2_1:42269783-42269802 | Msa0208060:CDS | 45.0% | |
| TTTACAAGGAGAGAAGGCCA+TGG | + | chr2_1:42269789-42269808 | Msa0208060:CDS | 45.0% | |
| GGCAAGTCAGTTCAAGAGAA+TGG | + | chr2_1:42269822-42269841 | Msa0208060:CDS | 45.0% | |
| TTCTTCAAAAGCTTCGAGGG+TGG | - | chr2_1:42269875-42269894 | None:intergenic | 45.0% | |
| AAGTGATCAAAACGGGAGCA+CGG | + | chr2_1:42270020-42270039 | Msa0208060:CDS | 45.0% | |
| TCAACACTCTCTCTCAGAGT+CGG | - | chr2_1:42270093-42270112 | None:intergenic | 45.0% | |
| !! | CTCTGAGAGAGAGTGTTGAT+CGG | + | chr2_1:42270094-42270113 | Msa0208060:CDS | 45.0% |
| !! | AGAGAGAGTGTTGATCGGAA+GGG | + | chr2_1:42270099-42270118 | Msa0208060:CDS | 45.0% |
| ! | TCAGAAAATGCTGTACTGGC+GGG | - | chr2_1:42270408-42270427 | None:intergenic | 45.0% |
| GCTTGAGAAAGGGAATTCTG+TGG | + | chr2_1:42270518-42270537 | Msa0208060:CDS | 45.0% | |
| AGAATCTGTGTCTGAGGGAA+TGG | + | chr2_1:42270563-42270582 | Msa0208060:CDS | 45.0% | |
| ACATGATGCAGACAAGGGAA+AGG | + | chr2_1:42270602-42270621 | Msa0208060:CDS | 45.0% | |
| CATGATGCAGACAAGGGAAA+GGG | + | chr2_1:42270603-42270622 | Msa0208060:CDS | 45.0% | |
| AAAGGCAGAGAGCTAGTAGA+AGG | + | chr2_1:42270712-42270731 | Msa0208060:CDS | 45.0% | |
| !! | TGTGGCTTTGAATCAGGGTA+TGG | + | chr2_1:42270750-42270769 | Msa0208060:CDS | 45.0% |
| ! | AGAGCAGTTGAGGCTTTTGA+AGG | + | chr2_1:42270776-42270795 | Msa0208060:CDS | 45.0% |
| AGACACAACATCATCCACAG+CGG | - | chr2_1:42270865-42270884 | None:intergenic | 45.0% | |
| CATGGATGCATGTAGGCAAT+AGG | - | chr2_1:42270948-42270967 | None:intergenic | 45.0% | |
| CTAAAGCTCCTGTATACGCA+GGG | - | chr2_1:42271015-42271034 | None:intergenic | 45.0% | |
| ACTAAAGCTCCTGTATACGC+AGG | - | chr2_1:42271016-42271035 | None:intergenic | 45.0% | |
| TGTATCAGTAGTAGGCGCGA+CGG | + | chr2_1:42269657-42269676 | Msa0208060:CDS | 50.0% | |
| CATTGCTTCTCTTGCTGCTG+TGG | - | chr2_1:42269755-42269774 | None:intergenic | 50.0% | |
| CACAGCAGCAAGAGAAGCAA+TGG | + | chr2_1:42269753-42269772 | Msa0208060:CDS | 50.0% | |
| AAAAGCTTCGAGGGTGGCTT+CGG | - | chr2_1:42269869-42269888 | None:intergenic | 50.0% | |
| !! | GAGAGAGAGTGTTGATCGGA+AGG | + | chr2_1:42270098-42270117 | Msa0208060:CDS | 50.0% |
| !! | GAGAGAGTGTTGATCGGAAG+GGG | + | chr2_1:42270100-42270119 | Msa0208060:CDS | 50.0% |
| !! | AGAGAGTGTTGATCGGAAGG+GGG | + | chr2_1:42270101-42270120 | Msa0208060:CDS | 50.0% |
| ! | AGCTCAAGTTTCGAGTGACC+AGG | + | chr2_1:42270140-42270159 | Msa0208060:CDS | 50.0% |
| ! | TTTGAAGTCCCACAAGCCAC+CGG | + | chr2_1:42270459-42270478 | Msa0208060:CDS | 50.0% |
| ACTGAATTCGTGCTTTCCGG+TGG | - | chr2_1:42270478-42270497 | None:intergenic | 50.0% | |
| TGCAGACAAGGGAAAGGGAA+CGG | + | chr2_1:42270608-42270627 | Msa0208060:CDS | 50.0% | |
| GGTATGGTGAAGAGCAGTTG+AGG | + | chr2_1:42270766-42270785 | Msa0208060:CDS | 50.0% | |
| AACCAAAAAGTCCACCGCTG+TGG | + | chr2_1:42270848-42270867 | Msa0208060:CDS | 50.0% | |
| !! | ATCCACAGCGGTGGACTTTT+TGG | - | chr2_1:42270853-42270872 | None:intergenic | 50.0% |
| TGTATCAGTAGTAGGCGCGA+CGG | + | chr2_1:42269657-42269676 | Msa0208060:CDS | 50.0% | |
| CATTGCTTCTCTTGCTGCTG+TGG | - | chr2_1:42269755-42269774 | None:intergenic | 50.0% | |
| CACAGCAGCAAGAGAAGCAA+TGG | + | chr2_1:42269753-42269772 | Msa0208060:CDS | 50.0% | |
| AAAAGCTTCGAGGGTGGCTT+CGG | - | chr2_1:42269869-42269888 | None:intergenic | 50.0% | |
| !! | GAGAGAGAGTGTTGATCGGA+AGG | + | chr2_1:42270098-42270117 | Msa0208060:CDS | 50.0% |
| !! | GAGAGAGTGTTGATCGGAAG+GGG | + | chr2_1:42270100-42270119 | Msa0208060:CDS | 50.0% |
| !! | AGAGAGTGTTGATCGGAAGG+GGG | + | chr2_1:42270101-42270120 | Msa0208060:CDS | 50.0% |
| ! | AGCTCAAGTTTCGAGTGACC+AGG | + | chr2_1:42270140-42270159 | Msa0208060:CDS | 50.0% |
| ! | TTTGAAGTCCCACAAGCCAC+CGG | + | chr2_1:42270459-42270478 | Msa0208060:CDS | 50.0% |
| ACTGAATTCGTGCTTTCCGG+TGG | - | chr2_1:42270478-42270497 | None:intergenic | 50.0% | |
| TGCAGACAAGGGAAAGGGAA+CGG | + | chr2_1:42270608-42270627 | Msa0208060:CDS | 50.0% | |
| GGTATGGTGAAGAGCAGTTG+AGG | + | chr2_1:42270766-42270785 | Msa0208060:CDS | 50.0% | |
| AACCAAAAAGTCCACCGCTG+TGG | + | chr2_1:42270848-42270867 | Msa0208060:CDS | 50.0% | |
| !! | ATCCACAGCGGTGGACTTTT+TGG | - | chr2_1:42270853-42270872 | None:intergenic | 50.0% |
| ACAAGGAGAGAAGGCCATGG+TGG | + | chr2_1:42269792-42269811 | Msa0208060:CDS | 55.0% | |
| ! | AGAGAAGGCCATGGTGGAGA+TGG | + | chr2_1:42269798-42269817 | Msa0208060:CDS | 55.0% |
| ACTTGCCTCCATCTCCACCA+TGG | - | chr2_1:42269809-42269828 | None:intergenic | 55.0% | |
| ! | ACGGGAGCACGGTTATGAGA+AGG | + | chr2_1:42270031-42270050 | Msa0208060:CDS | 55.0% |
| TCGGAAGGGGGAAAGATCGT+CGG | + | chr2_1:42270113-42270132 | Msa0208060:CDS | 55.0% | |
| GAGTGACCAGGAACCTAGCT+TGG | + | chr2_1:42270152-42270171 | Msa0208060:CDS | 55.0% | |
| CACACACCAAGCTAGGTTCC+TGG | - | chr2_1:42270161-42270180 | None:intergenic | 55.0% | |
| !! | CAGGAACCTAGCTTGGTGTG+TGG | + | chr2_1:42270159-42270178 | Msa0208060:CDS | 55.0% |
| CCACTTCCACACACCAAGCT+AGG | - | chr2_1:42270168-42270187 | None:intergenic | 55.0% | |
| !! | CCTAGCTTGGTGTGTGGAAG+TGG | + | chr2_1:42270165-42270184 | Msa0208060:CDS | 55.0% |
| AAGGGAACGGTGACTATCGC+TGG | + | chr2_1:42270621-42270640 | Msa0208060:CDS | 55.0% | |
| CACAACATCATCCACAGCGG+TGG | - | chr2_1:42270862-42270881 | None:intergenic | 55.0% | |
| GTATACGCAGGGTTCGGGAA+GGG | - | chr2_1:42271004-42271023 | None:intergenic | 55.0% | |
| TGTATACGCAGGGTTCGGGA+AGG | - | chr2_1:42271005-42271024 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCGTATAC+AGG | + | chr2_1:42271004-42271023 | Msa0208060:intron | 55.0% | |
| CTCCTGTATACGCAGGGTTC+GGG | - | chr2_1:42271009-42271028 | None:intergenic | 55.0% | |
| GCTCCTGTATACGCAGGGTT+CGG | - | chr2_1:42271010-42271029 | None:intergenic | 55.0% | |
| ACAAGGAGAGAAGGCCATGG+TGG | + | chr2_1:42269792-42269811 | Msa0208060:CDS | 55.0% | |
| ! | AGAGAAGGCCATGGTGGAGA+TGG | + | chr2_1:42269798-42269817 | Msa0208060:CDS | 55.0% |
| ACTTGCCTCCATCTCCACCA+TGG | - | chr2_1:42269809-42269828 | None:intergenic | 55.0% | |
| ! | ACGGGAGCACGGTTATGAGA+AGG | + | chr2_1:42270031-42270050 | Msa0208060:CDS | 55.0% |
| TCGGAAGGGGGAAAGATCGT+CGG | + | chr2_1:42270113-42270132 | Msa0208060:CDS | 55.0% | |
| GAGTGACCAGGAACCTAGCT+TGG | + | chr2_1:42270152-42270171 | Msa0208060:CDS | 55.0% | |
| CACACACCAAGCTAGGTTCC+TGG | - | chr2_1:42270161-42270180 | None:intergenic | 55.0% | |
| !! | CAGGAACCTAGCTTGGTGTG+TGG | + | chr2_1:42270159-42270178 | Msa0208060:CDS | 55.0% |
| CCACTTCCACACACCAAGCT+AGG | - | chr2_1:42270168-42270187 | None:intergenic | 55.0% | |
| !! | CCTAGCTTGGTGTGTGGAAG+TGG | + | chr2_1:42270165-42270184 | Msa0208060:CDS | 55.0% |
| AAGGGAACGGTGACTATCGC+TGG | + | chr2_1:42270621-42270640 | Msa0208060:CDS | 55.0% | |
| CACAACATCATCCACAGCGG+TGG | - | chr2_1:42270862-42270881 | None:intergenic | 55.0% | |
| GTATACGCAGGGTTCGGGAA+GGG | - | chr2_1:42271004-42271023 | None:intergenic | 55.0% | |
| TGTATACGCAGGGTTCGGGA+AGG | - | chr2_1:42271005-42271024 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCGTATAC+AGG | + | chr2_1:42271004-42271023 | Msa0208060:intron | 55.0% | |
| CTCCTGTATACGCAGGGTTC+GGG | - | chr2_1:42271009-42271028 | None:intergenic | 55.0% | |
| GCTCCTGTATACGCAGGGTT+CGG | - | chr2_1:42271010-42271029 | None:intergenic | 55.0% | |
| ! | GAAGGCCATGGTGGAGATGG+AGG | + | chr2_1:42269801-42269820 | Msa0208060:CDS | 60.0% |
| ! | CGTGCTTTCCGGTGGCTTGT+GGG | - | chr2_1:42270470-42270489 | None:intergenic | 60.0% |
| TCGTGCTTTCCGGTGGCTTG+TGG | - | chr2_1:42270471-42270490 | None:intergenic | 60.0% | |
| ! | GAAGGCCATGGTGGAGATGG+AGG | + | chr2_1:42269801-42269820 | Msa0208060:CDS | 60.0% |
| ! | CGTGCTTTCCGGTGGCTTGT+GGG | - | chr2_1:42270470-42270489 | None:intergenic | 60.0% |
| TCGTGCTTTCCGGTGGCTTG+TGG | - | chr2_1:42270471-42270490 | None:intergenic | 60.0% | |
| CTTCGAGGGTGGCTTCGGCA+TGG | - | chr2_1:42269864-42269883 | None:intergenic | 65.0% | |
| CTTCGAGGGTGGCTTCGGCA+TGG | - | chr2_1:42269864-42269883 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 42269619 | 42271400 | 42269619 | ID=Msa0208060;Name=Msa0208060 |
| chr2_1 | mRNA | 42269619 | 42271400 | 42269619 | ID=Msa0208060-mRNA-1;Parent=Msa0208060;Name=Msa0208060-mRNA-1;_AED=0.09;_eAED=0.15;_QI=0|0|0|1|1|1|2|0|465 |
| chr2_1 | exon | 42269619 | 42270902 | 42269619 | ID=Msa0208060-mRNA-1:exon:12685;Parent=Msa0208060-mRNA-1 |
| chr2_1 | exon | 42271287 | 42271400 | 42271287 | ID=Msa0208060-mRNA-1:exon:12686;Parent=Msa0208060-mRNA-1 |
| chr2_1 | CDS | 42269619 | 42270902 | 42269619 | ID=Msa0208060-mRNA-1:cds;Parent=Msa0208060-mRNA-1 |
| chr2_1 | CDS | 42271287 | 42271400 | 42271287 | ID=Msa0208060-mRNA-1:cds;Parent=Msa0208060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
