AlfalfaGEDB | Msa1074200

M. sativa cultivar zhongmu-4 / Msa1074200

KEGG: K09419
GO: GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010035 GO:0010038 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00447.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1074200	XP_003625136.1	98.283	233	4	0	1	233	1	233	2.16e-168	473

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1074200	sp\|O22230\|HSFB3_ARATH	61.667	180	51	3	20	181	38	217	2.41e-70	218

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1074200	G7KTH6	98.283	233	4	0	1	233	1	233	1.03e-168	473

TFs/TRs:

Gene ID	Type	Classification
Msa1074200	TF	HSF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037760	Msa1074200	0.800508	1.394707e-48	-8.615850e-47
Msa0043740	Msa1074200	0.801833	7.470374e-49	-8.615850e-47
Msa0046170	Msa1074200	0.809878	1.521845e-50	-8.615850e-47
Msa0052580	Msa1074200	0.830075	3.601925e-55	-8.615850e-47
Msa0059440	Msa1074200	0.804718	1.888364e-49	-8.615850e-47
Msa0078700	Msa1074200	0.802822	4.674027e-49	-8.615850e-47
Msa0090380	Msa1074200	0.826907	2.096093e-54	-8.615850e-47
Msa0095940	Msa1074200	0.806059	9.886779e-50	-8.615850e-47
Msa0611060	Msa1074200	0.834496	2.898231e-56	-8.615850e-47
Msa0615210	Msa1074200	0.850767	1.372279e-60	-8.615850e-47
Msa0619310	Msa1074200	0.809062	2.278273e-50	-8.615850e-47
Msa0631130	Msa1074200	0.849878	2.436787e-60	-8.615850e-47
Msa0635270	Msa1074200	0.825779	3.891117e-54	-8.615850e-47
Msa0641130	Msa1074200	0.801430	9.038520e-49	-8.615850e-47
Msa0646240	Msa1074200	0.812550	4.007259e-51	-8.615850e-47
Msa0653830	Msa1074200	0.800971	1.121873e-48	-8.615850e-47
Msa0669350	Msa1074200	0.835833	1.332800e-56	-8.615850e-47
Msa0675630	Msa1074200	0.801873	7.333340e-49	-8.615850e-47
Msa0704680	Msa1074200	0.803211	3.885215e-49	-8.615850e-47
Msa0709140	Msa1074200	0.808753	2.652781e-50	-8.615850e-47
Msa0744640	Msa1074200	0.861097	1.303487e-63	-8.615850e-47
Msa0832950	Msa1074200	0.810649	1.037771e-50	-8.615850e-47
Msa0833270	Msa1074200	0.810649	1.037938e-50	-8.615850e-47
Msa0841730	Msa1074200	0.860661	1.768391e-63	-8.615850e-47
Msa0137860	Msa1074200	0.816571	5.163734e-52	-8.615850e-47
Msa0139530	Msa1074200	0.809477	1.855849e-50	-8.615850e-47
Msa0139680	Msa1074200	0.820411	6.956019e-53	-8.615850e-47
Msa0150620	Msa1074200	0.807658	4.538274e-50	-8.615850e-47
Msa0208060	Msa1074200	0.807757	4.324559e-50	-8.615850e-47
Msa0217060	Msa1074200	0.822124	2.801285e-53	-8.615850e-47
Msa0383900	Msa1074200	0.835551	1.570767e-56	-8.615850e-47
Msa0393100	Msa1074200	0.807563	4.753980e-50	-8.615850e-47
Msa0415640	Msa1074200	0.812198	4.782414e-51	-8.615850e-47
Msa0434300	Msa1074200	0.807632	4.597467e-50	-8.615850e-47
Msa0434400	Msa1074200	0.826849	2.164701e-54	-8.615850e-47
Msa0441260	Msa1074200	0.801068	1.071871e-48	-8.615850e-47
Msa0442860	Msa1074200	0.822433	2.375394e-53	-8.615850e-47
Msa0443450	Msa1074200	0.813211	2.871606e-51	-8.615850e-47
Msa1001120	Msa1074200	0.821059	4.936891e-53	-8.615850e-47
Msa1030200	Msa1074200	0.800695	1.277368e-48	-8.615850e-47
Msa1030210	Msa1074200	0.816704	4.820337e-52	-8.615850e-47
Msa1034450	Msa1074200	0.997328	1.255792e-240	-8.615850e-47
Msa1074200	Msa1086490	-0.802344	5.865400e-49	-8.615850e-47
Msa1074200	Msa1092310	0.819612	1.059698e-52	-8.615850e-47
Msa1074200	Msa1114670	0.942455	6.974632e-102	-8.615850e-47
Msa1074200	Msa1116840	0.810537	1.097203e-50	-8.615850e-47
Msa1074200	Msa1120580	0.837688	4.483793e-57	-8.615850e-47
Msa1074200	Msa1131430	0.819221	1.301367e-52	-8.615850e-47
Msa1074200	Msa1131790	0.839429	1.593353e-57	-8.615850e-47
Msa1074200	Msa1133700	0.975018	3.439394e-139	-8.615850e-47
Msa1074200	Msa1136760	0.828216	1.016703e-54	-8.615850e-47
Msa1074200	Msa1157110	0.859737	3.363535e-63	-8.615850e-47
Msa1074200	Msa1157670	0.815347	9.683800e-52	-8.615850e-47
Msa1074200	Msa1159170	0.911343	6.767968e-83	-8.615850e-47
Msa1074200	Msa1187490	0.811765	5.944049e-51	-8.615850e-47
Msa1074200	Msa1191440	0.802589	5.221976e-49	-8.615850e-47
Msa1074200	Msa1202800	0.821606	3.693249e-53	-8.615850e-47
Msa1074200	Msa1207390	0.807399	5.151277e-50	-8.615850e-47
Msa1074200	Msa1207430	0.802871	4.566666e-49	-8.615850e-47
Msa1074200	Msa1218160	0.819342	1.221277e-52	-8.615850e-47
Msa1074200	Msa1225580	0.818574	1.825717e-52	-8.615850e-47
Msa1074200	Msa1238600	0.823945	1.053974e-53	-8.615850e-47
Msa1074200	Msa1246780	0.820156	7.960769e-53	-8.615850e-47
Msa1074200	Msa1255210	0.830512	2.817422e-55	-8.615850e-47
Msa1074200	Msa1256060	0.807329	5.330054e-50	-8.615850e-47
Msa1074200	Msa1257610	0.805372	1.377760e-49	-8.615850e-47
Msa1074200	Msa1286210	0.810325	1.219442e-50	-8.615850e-47
Msa1074200	Msa1289050	0.800233	1.586708e-48	-8.615850e-47
Msa1074200	Msa1289090	0.803727	3.036058e-49	-8.615850e-47
Msa1074200	Msa1295650	0.833605	4.845694e-56	-8.615850e-47
Msa1074200	Msa1306830	0.822658	2.105478e-53	-8.615850e-47
Msa1074200	Msa1307530	0.812590	3.926285e-51	-8.615850e-47
Msa1074200	Msa1322150	0.829345	5.423418e-55	-8.615850e-47
Msa1074200	Msa1355510	0.817631	2.983774e-52	-8.615850e-47
Msa1074200	Msa1362850	0.847571	1.063009e-59	-8.615850e-47
Msa1074200	Msa1386000	0.806431	8.253568e-50	-8.615850e-47
Msa1074200	Msa1395110	0.810071	1.382983e-50	-8.615850e-47
Msa1074200	Msa1397390	0.805928	1.053519e-49	-8.615850e-47
Msa1074200	Msa1398140	0.809956	1.464390e-50	-8.615850e-47
Msa1074200	Msa1404050	0.814684	1.359256e-51	-8.615850e-47
Msa1074200	Msa1405530	0.805755	1.145307e-49	-8.615850e-47
Msa1074200	Msa1409690	0.811123	8.193565e-51	-8.615850e-47
Msa1074200	Msa1413800	0.812888	3.379726e-51	-8.615850e-47
Msa1074200	Msa1420940	0.822494	2.298336e-53	-8.615850e-47
Msa1074200	Msa1433410	0.821913	3.135433e-53	-8.615850e-47
Msa1074200	Msa1436090	0.812205	4.766672e-51	-8.615850e-47
Msa1074200	Msa1436490	0.804420	2.179091e-49	-8.615850e-47
Msa1074200	Msa1443620	0.816418	5.588278e-52	-8.615850e-47
Msa1074200	Msa1447870	0.822640	2.125757e-53	-8.615850e-47
Msa1074200	Msa1455200	0.805486	1.303990e-49	-8.615850e-47
Msa0256920	Msa1074200	0.827452	1.552572e-54	-8.615850e-47
Msa0264680	Msa1074200	0.818398	2.001664e-52	-8.615850e-47
Msa0272400	Msa1074200	0.802021	6.835307e-49	-8.615850e-47
Msa0279660	Msa1074200	0.827226	1.758582e-54	-8.615850e-47
Msa0282960	Msa1074200	0.840542	8.166660e-58	-8.615850e-47
Msa0296900	Msa1074200	0.836576	8.632866e-57	-8.615850e-47
Msa0302730	Msa1074200	0.815510	8.908968e-52	-8.615850e-47
Msa0307420	Msa1074200	0.809415	1.914224e-50	-8.615850e-47
Msa0334630	Msa1074200	0.810225	1.281418e-50	-8.615850e-47
Msa0335080	Msa1074200	0.825580	4.338545e-54	-8.615850e-47
Msa0345050	Msa1074200	0.819748	9.867926e-53	-8.615850e-47
Msa0345890	Msa1074200	0.821102	4.825519e-53	-8.615850e-47
Msa0345980	Msa1074200	0.819723	1.000123e-52	-8.615850e-47
Msa0357310	Msa1074200	0.812894	3.369524e-51	-8.615850e-47
Msa0488580	Msa1074200	0.828285	9.787481e-55	-8.615850e-47
Msa0490320	Msa1074200	0.856476	3.135446e-62	-8.615850e-47
Msa0497860	Msa1074200	0.801381	9.247761e-49	-8.615850e-47
Msa0522140	Msa1074200	0.800399	1.467691e-48	-8.615850e-47
Msa0530730	Msa1074200	0.804720	1.886649e-49	-8.615850e-47
Msa0534270	Msa1074200	0.825135	5.527341e-54	-8.615850e-47
Msa0534610	Msa1074200	0.848353	6.468673e-60	-8.615850e-47
Msa0535400	Msa1074200	0.805746	1.150282e-49	-8.615850e-47
Msa0577490	Msa1074200	0.842471	2.534579e-58	-8.615850e-47
Msa0584600	Msa1074200	0.803833	2.886622e-49	-8.615850e-47
Msa0590390	Msa1074200	0.809944	1.472817e-50	-8.615850e-47
Msa0590810	Msa1074200	0.847080	1.449465e-59	-8.615850e-47
Msa0592650	Msa1074200	0.833455	5.280220e-56	-8.615850e-47
Msa0592660	Msa1074200	0.815071	1.115554e-51	-8.615850e-47
Msa0598060	Msa1074200	0.814360	1.603431e-51	-8.615850e-47
Msa0600590	Msa1074200	0.812558	3.990885e-51	-8.615850e-47
Msa0852790	Msa1074200	0.802299	5.991821e-49	-8.615850e-47
Msa0862620	Msa1074200	0.802957	4.383268e-49	-8.615850e-47
Msa0863990	Msa1074200	0.824938	6.152477e-54	-8.615850e-47
Msa0870510	Msa1074200	0.838762	2.371396e-57	-8.615850e-47
Msa0874640	Msa1074200	0.800249	1.574847e-48	-8.615850e-47
Msa0905570	Msa1074200	0.836886	7.195978e-57	-8.615850e-47
Msa0930740	Msa1074200	0.800590	1.341881e-48	-8.615850e-47
Msa0945130	Msa1074200	0.816968	4.206229e-52	-8.615850e-47
Msa0966580	Msa1074200	0.825639	4.201322e-54	-8.615850e-47
Msa0967750	Msa1074200	0.804413	2.185788e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1074200	MtrunA17_Chr7g0257331	98.283	233	4	0	1	233	1	233	1.99e-172	473
Msa1074200	MtrunA17_Chr5g0441531	43.781	201	103	2	15	205	18	218	1.91e-51	167
Msa1074200	MtrunA17_Chr8g0375041	42.308	234	106	4	16	221	3	235	1.63e-50	165
Msa1074200	MtrunA17_Chr5g0402291	43.850	187	81	1	16	178	3	189	2.64e-50	165
Msa1074200	MtrunA17_Chr5g0397881	44.162	197	75	2	20	181	22	218	2.66e-50	167
Msa1074200	MtrunA17_Chr1g0203601	38.912	239	100	3	16	208	12	250	3.49e-50	166
Msa1074200	MtrunA17_Chr3g0134031	37.553	237	93	4	2	190	9	238	3.78e-48	162
Msa1074200	MtrunA17_Chr6g0472421	43.216	199	77	2	20	182	31	229	2.56e-44	151
Msa1074200	MtrunA17_Chr4g0047421	46.154	169	83	4	20	181	31	198	2.31e-42	142
Msa1074200	MtrunA17_Chr5g0410881	49.020	153	74	2	19	170	29	178	2.15e-41	147
Msa1074200	MtrunA17_Chr7g0260331	56.190	105	42	1	9	113	40	140	4.28e-38	135
Msa1074200	MtrunA17_Chr3g0135831	45.062	162	76	3	9	170	37	185	4.55e-38	136
Msa1074200	MtrunA17_Chr6g0467041	56.989	93	40	0	21	113	21	113	3.60e-37	132
Msa1074200	MtrunA17_Chr1g0204741	52.033	123	56	1	5	127	23	142	4.84e-37	132
Msa1074200	MtrunA17_Chr1g0185131	40.860	186	84	4	20	203	30	191	2.12e-36	130
Msa1074200	MtrunA17_Chr8g0379701	43.750	144	72	1	13	156	3	137	1.13e-35	130
Msa1074200	MtrunA17_Chr4g0071051	52.679	112	49	1	9	120	92	199	7.95e-35	128
Msa1074200	MtrunA17_Chr8g0378061	58.242	91	38	0	23	113	23	113	1.41e-33	125
Msa1074200	MtrunA17_Chr6g0485571	39.394	165	75	2	21	172	10	162	1.31e-32	121
Msa1074200	MtrunA17_Chr2g0330821	54.255	94	43	0	20	113	77	170	4.30e-32	120
Msa1074200	MtrunA17_Chr4g0039891	43.333	150	80	2	22	170	12	157	1.07e-31	120
Msa1074200	MtrunA17_Chr2g0284481	46.667	105	56	0	22	126	15	119	2.87e-31	118
Msa1074200	MtrunA17_Chr8g0392001	54.255	94	42	1	21	113	21	114	2.26e-30	115
Msa1074200	MtrunA17_Chr1g0179321	60.000	70	28	0	12	81	39	108	1.15e-23	91.7
Msa1074200	MtrunA17_Chr4g0023771	50.000	58	29	0	22	79	15	72	1.93e-15	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1074200	AT2G41690.1	61.667	180	51	3	20	181	38	217	2.45e-71	218
Msa1074200	AT5G62020.1	40.316	253	91	7	20	219	21	266	7.34e-50	165
Msa1074200	AT1G46264.1	41.784	213	86	3	11	185	23	235	5.94e-49	164
Msa1074200	AT4G36990.1	45.641	195	88	3	12	188	4	198	2.50e-46	155
Msa1074200	AT4G11660.1	41.589	214	79	2	20	187	57	270	2.09e-45	155
Msa1074200	AT1G32330.1	48.026	152	79	0	19	170	34	185	7.44e-42	148
Msa1074200	AT1G32330.2	48.026	152	79	0	19	170	34	185	7.57e-42	148
Msa1074200	AT4G17750.1	62.105	95	36	0	20	114	50	144	2.95e-39	142
Msa1074200	AT5G43840.1	53.043	115	54	0	12	126	9	123	9.71e-39	135
Msa1074200	AT3G63350.1	57.009	107	42	1	6	112	16	118	1.35e-38	135
Msa1074200	AT2G26150.1	45.679	162	75	4	9	170	35	183	1.02e-37	135
Msa1074200	AT2G26150.4	45.679	162	75	4	9	170	35	183	1.02e-37	135
Msa1074200	AT3G51910.1	54.286	105	48	0	12	116	19	123	1.48e-37	132
Msa1074200	AT5G03720.2	43.860	171	83	3	22	191	55	213	1.95e-37	135
Msa1074200	AT5G03720.1	43.860	171	83	3	22	191	55	213	1.95e-37	135
Msa1074200	AT3G22830.1	56.604	106	46	0	12	117	51	156	6.49e-37	134
Msa1074200	AT3G24520.1	43.421	152	68	2	21	172	16	149	6.01e-36	130
Msa1074200	AT3G02990.1	46.980	149	74	1	22	170	23	166	2.66e-35	130
Msa1074200	AT5G16820.1	59.140	93	38	0	22	114	27	119	1.24e-33	126
Msa1074200	AT5G16820.2	59.140	93	38	0	22	114	27	119	1.24e-33	126
Msa1074200	AT4G13980.1	57.143	91	39	0	23	113	24	114	8.46e-33	124
Msa1074200	AT5G54070.1	52.174	92	44	0	21	112	70	161	5.23e-32	119
Msa1074200	AT5G45710.3	36.493	211	111	4	15	215	6	203	1.36e-29	113
Msa1074200	AT5G45710.1	36.493	211	111	4	15	215	6	203	1.36e-29	113
Msa1074200	AT1G67970.1	41.509	159	78	4	21	176	18	164	1.03e-28	111
Msa1074200	AT4G18880.1	49.524	105	53	0	22	126	15	119	2.48e-26	105
Msa1074200	AT4G18870.1	39.773	88	53	0	22	109	146	233	4.32e-20	87.0
Msa1074200	AT4G18870.1	36.842	95	59	1	15	109	6	99	1.21e-16	77.4
Msa1074200	AT1G77570.1	34.444	90	56	2	23	109	27	116	2.82e-11	60.1

Find 58 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTGTTGGGTTTCTATTGTT+GGG	0.298965	7_2:+71939145	Msa1074200:five_prime_UTR
AAGGAGAAAGAAGGATTAAA+AGG	0.312750	7_2:+71940990	Msa1074200:CDS
GGGTTTCTATTGTTGGGGTT+GGG	0.315467	7_2:+71939151	Msa1074200:five_prime_UTR
TGGGTTTCTATTGTTGGGGT+TGG	0.324808	7_2:+71939150	Msa1074200:five_prime_UTR
GAATGAATATTTAAGATTGA+TGG	0.332068	7_2:-71939211	None:intergenic
ATAAAAGGCCAATGCTGTTT+GGG	0.344706	7_2:+71940948	Msa1074200:CDS
AAGCTAAAGATGATGATAAA+AGG	0.345414	7_2:+71940933	Msa1074200:CDS
TAAACTATTTATTCATTAGA+TGG	0.347402	7_2:+71939046	Msa1074200:five_prime_UTR
TCGTGTTGGGTTTCTATTGT+TGG	0.349086	7_2:+71939144	Msa1074200:five_prime_UTR
GTAAAGTTGCAACAAGTAGA+TGG	0.356542	7_2:+71940618	Msa1074200:CDS
GTGTAAAGAACTACTTGATT+TGG	0.382134	7_2:+71940877	Msa1074200:CDS
AATGCTGTTTGGGGTGAGAT+TGG	0.405597	7_2:+71940958	Msa1074200:CDS
GGAGTAGTTATTAGTGAGAA+GGG	0.409709	7_2:+71939339	Msa1074200:CDS
GATAAAAGGCCAATGCTGTT+TGG	0.412696	7_2:+71940947	Msa1074200:CDS
TATTAGTGAGAAGGGATTGT+TGG	0.414198	7_2:+71939347	Msa1074200:CDS
CGATGAAGGAACGGCGTTTG+TGG	0.421292	7_2:+71939461	Msa1074200:CDS
TCATCAACCTCATCAACTTC+GGG	0.428531	7_2:+71940770	Msa1074200:CDS
GATATCACACCATCGGTTAT+CGG	0.429226	7_2:-71939432	None:intergenic
GGCGTTTGTGGTGTGGCAGC+CGG	0.436959	7_2:+71939473	Msa1074200:CDS
AGGAGTAGTTATTAGTGAGA+AGG	0.465195	7_2:+71939338	Msa1074200:CDS
TGCAATGAAAGATTCAAGAA+AGG	0.469330	7_2:+71940647	Msa1074200:CDS
GAGAGTTACTATCCGAGATT+CGG	0.475046	7_2:+71940675	Msa1074200:CDS
ATGAACTGTGGAGTCGTGTT+GGG	0.479875	7_2:+71939131	Msa1074200:five_prime_UTR
TTGCTATGCTTGAAGAGTGT+TGG	0.486048	7_2:-71939519	None:intergenic
ATCATCAACCTCATCAACTT+CGG	0.493338	7_2:+71940769	Msa1074200:CDS
CTGAGCTAACAAGCATGAAA+AGG	0.494508	7_2:+71940852	Msa1074200:CDS
TAGAAAGATAAAGAGAAAGA+AGG	0.503723	7_2:+71939069	Msa1074200:five_prime_UTR
CATGTATGTCTTCAACAAGA+AGG	0.524524	7_2:-71939397	None:intergenic
CATGAACTGTGGAGTCGTGT+TGG	0.525370	7_2:+71939130	Msa1074200:five_prime_UTR
GAGCAACAAGCAACAACAAA+CGG	0.533270	7_2:+71940712	Msa1074200:CDS
AATATTTAAGATTGATGGAG+AGG	0.535030	7_2:-71939206	None:intergenic
ATGTTCAACAAGGAGAAAGA+AGG	0.541421	7_2:+71940981	Msa1074200:CDS
GTCTTCAACAAGAAGGGTGA+TGG	0.545694	7_2:-71939390	None:intergenic
GAGAAGGGATTGTTGGAATG+TGG	0.547926	7_2:+71939354	Msa1074200:CDS
AATCTCACCCCAAACAGCAT+TGG	0.559832	7_2:-71940956	None:intergenic
CTTGTTGAAGACATACATGT+TGG	0.560125	7_2:+71939401	Msa1074200:CDS
AGATTCGGAGAAGAAAAGCT+TGG	0.562625	7_2:+71940690	Msa1074200:CDS
TAACCGATGGTGTGATATCG+TGG	0.574458	7_2:+71939436	Msa1074200:CDS
TAAAGTTGCAACAAGTAGAT+GGG	0.577262	7_2:+71940619	Msa1074200:CDS
ATGTATGTCTTCAACAAGAA+GGG	0.585625	7_2:-71939396	None:intergenic
GTTTGTGGTGTGGCAGCCGG+CGG	0.593281	7_2:+71939476	Msa1074200:CDS
TTCGGGTTACACTAATCTAG+TGG	0.594205	7_2:+71940787	Msa1074200:CDS
TGAAAACAAGCGACTCAAAG+AGG	0.607328	7_2:+71940811	Msa1074200:CDS
GTCGAGGATCCGATAACCGA+TGG	0.607491	7_2:+71939423	Msa1074200:CDS
GTGTTGGGTTTCTATTGTTG+GGG	0.607576	7_2:+71939146	Msa1074200:five_prime_UTR
AAAGAAATAGAAATAATGGA+AGG	0.609607	7_2:+71939318	Msa1074200:exon
AGTGTAACCCGAAGTTGATG+AGG	0.609806	7_2:-71940777	None:intergenic
CTTGCATTTCTCATGAACTG+TGG	0.612827	7_2:+71939119	Msa1074200:five_prime_UTR
GTGATATCGTGGAACGATGA+AGG	0.614245	7_2:+71939447	Msa1074200:CDS
ATCGTGGAACGATGAAGGAA+CGG	0.618716	7_2:+71939452	Msa1074200:CDS
GAAGACATACATGTTGGTCG+AGG	0.623457	7_2:+71939407	Msa1074200:CDS
AAGGAACGGCGTTTGTGGTG+TGG	0.626326	7_2:+71939466	Msa1074200:CDS
ATATCACGAGCAAACTCCGC+CGG	0.632816	7_2:-71939492	None:intergenic
GCGACTCAAAGAGGAAAATG+TGG	0.640956	7_2:+71940820	Msa1074200:CDS
TATGCTTGAAGAGTGTTGGA+AGG	0.652326	7_2:-71939515	None:intergenic
GTGAGATTGGATGTTCAACA+AGG	0.660188	7_2:+71940971	Msa1074200:CDS
GTTCCACGATATCACACCAT+CGG	0.688849	7_2:-71939439	None:intergenic
TAAAAGGCCAATGCTGTTTG+GGG	0.694963	7_2:+71940949	Msa1074200:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAGAAATAGAAATAA+TGG	+	chr7_2:71939314-71939333	Msa1074200:exon	10.0%
!!!	TTTTTATTTTGTAAAGTATT+AGG	+	chr7_2:71939728-71939747	Msa1074200:intron	10.0%
!!!	TGTTTATTATTTCAAATTTT+GGG	-	chr7_2:71939851-71939870	None:intergenic	10.0%
!!	AAAAAAAGAAATAGAAATAA+TGG	+	chr7_2:71939314-71939333	Msa1074200:exon	10.0%
!!!	TTTTTATTTTGTAAAGTATT+AGG	+	chr7_2:71939728-71939747	Msa1074200:intron	10.0%
!!!	TGTTTATTATTTCAAATTTT+GGG	-	chr7_2:71939851-71939870	None:intergenic	10.0%
!!	TAAACTATTTATTCATTAGA+TGG	+	chr7_2:71939046-71939065	Msa1074200:five_prime_UTR	15.0%
!!!	GTTTATTATTTCAAATTTTG+GGG	-	chr7_2:71939850-71939869	None:intergenic	15.0%
!!!	CTGTTTATTATTTCAAATTT+TGG	-	chr7_2:71939852-71939871	None:intergenic	15.0%
!!	AATAATAAACAGAGAAAAAA+TGG	+	chr7_2:71939860-71939879	Msa1074200:intron	15.0%
!!!	AGTATTTTCAATTAAGATAT+AGG	+	chr7_2:71940058-71940077	Msa1074200:intron	15.0%
!!!	GTATTTTCAATTAAGATATA+GGG	+	chr7_2:71940059-71940078	Msa1074200:intron	15.0%
!!!	AATTCATTGTTTATTTTTGA+AGG	+	chr7_2:71940225-71940244	Msa1074200:intron	15.0%
!!	TAAAATTAAATACCTATTTG+TGG	+	chr7_2:71940579-71940598	Msa1074200:intron	15.0%
!!	AAAATTAAATACCTATTTGT+GGG	+	chr7_2:71940580-71940599	Msa1074200:intron	15.0%
!!	TTCAATTTATACCAAAAAAA+TGG	+	chr7_2:71940901-71940920	Msa1074200:CDS	15.0%
!!	TAAACTATTTATTCATTAGA+TGG	+	chr7_2:71939046-71939065	Msa1074200:five_prime_UTR	15.0%
!!!	GTTTATTATTTCAAATTTTG+GGG	-	chr7_2:71939850-71939869	None:intergenic	15.0%
!!!	CTGTTTATTATTTCAAATTT+TGG	-	chr7_2:71939852-71939871	None:intergenic	15.0%
!!	AATAATAAACAGAGAAAAAA+TGG	+	chr7_2:71939860-71939879	Msa1074200:intron	15.0%
!!!	AGTATTTTCAATTAAGATAT+AGG	+	chr7_2:71940058-71940077	Msa1074200:intron	15.0%
!!!	GTATTTTCAATTAAGATATA+GGG	+	chr7_2:71940059-71940078	Msa1074200:intron	15.0%
!!!	AATTCATTGTTTATTTTTGA+AGG	+	chr7_2:71940225-71940244	Msa1074200:intron	15.0%
!!	TAAAATTAAATACCTATTTG+TGG	+	chr7_2:71940579-71940598	Msa1074200:intron	15.0%
!!	AAAATTAAATACCTATTTGT+GGG	+	chr7_2:71940580-71940599	Msa1074200:intron	15.0%
!!	TTCAATTTATACCAAAAAAA+TGG	+	chr7_2:71940901-71940920	Msa1074200:CDS	15.0%
!!!	GAATGAATATTTAAGATTGA+TGG	-	chr7_2:71939214-71939233	None:intergenic	20.0%
!!!	AAAGAAATAGAAATAATGGA+AGG	+	chr7_2:71939318-71939337	Msa1074200:exon	20.0%
!!	ATCTAAATATACGATCAATT+TGG	-	chr7_2:71939783-71939802	None:intergenic	20.0%
!!!	GTAAAGTTTTGTTAAGAAAA+AGG	+	chr7_2:71939897-71939916	Msa1074200:intron	20.0%
!!	AAAAAGGATAGGAAAAAAAA+AGG	+	chr7_2:71939913-71939932	Msa1074200:intron	20.0%
!!	ATATTTGTTTAACCTAGTTT+AGG	+	chr7_2:71939974-71939993	Msa1074200:intron	20.0%
!!!	AAAAAAAAACTAGTTTAGCT+AGG	+	chr7_2:71940010-71940029	Msa1074200:intron	20.0%
!!!	AGAGAATATTTTATATCTTC+TGG	-	chr7_2:71940090-71940109	None:intergenic	20.0%
!!!	TGTATTAAAAGCATGTTTTA+TGG	-	chr7_2:71940465-71940484	None:intergenic	20.0%
!!	TTCAAGAAAGAATTCATATT+TGG	-	chr7_2:71940488-71940507	None:intergenic	20.0%
!!!	GAATGAATATTTAAGATTGA+TGG	-	chr7_2:71939214-71939233	None:intergenic	20.0%
!!!	AAAGAAATAGAAATAATGGA+AGG	+	chr7_2:71939318-71939337	Msa1074200:exon	20.0%
!!	ATCTAAATATACGATCAATT+TGG	-	chr7_2:71939783-71939802	None:intergenic	20.0%
!!!	GTAAAGTTTTGTTAAGAAAA+AGG	+	chr7_2:71939897-71939916	Msa1074200:intron	20.0%
!!	AAAAAGGATAGGAAAAAAAA+AGG	+	chr7_2:71939913-71939932	Msa1074200:intron	20.0%
!!	ATATTTGTTTAACCTAGTTT+AGG	+	chr7_2:71939974-71939993	Msa1074200:intron	20.0%
!!!	AAAAAAAAACTAGTTTAGCT+AGG	+	chr7_2:71940010-71940029	Msa1074200:intron	20.0%
!!!	AGAGAATATTTTATATCTTC+TGG	-	chr7_2:71940090-71940109	None:intergenic	20.0%
!!!	TGTATTAAAAGCATGTTTTA+TGG	-	chr7_2:71940465-71940484	None:intergenic	20.0%
!!	TTCAAGAAAGAATTCATATT+TGG	-	chr7_2:71940488-71940507	None:intergenic	20.0%
!	TAGAAAGATAAAGAGAAAGA+AGG	+	chr7_2:71939069-71939088	Msa1074200:five_prime_UTR	25.0%
!!	AATATTTAAGATTGATGGAG+AGG	-	chr7_2:71939209-71939228	None:intergenic	25.0%
!	AATATACGATCAATTTGGAA+TGG	-	chr7_2:71939778-71939797	None:intergenic	25.0%
!	ATAAACAGAGAAAAAATGGA+TGG	+	chr7_2:71939864-71939883	Msa1074200:intron	25.0%
!!!	GTTTTGTTAAGAAAAAGGAT+AGG	+	chr7_2:71939902-71939921	Msa1074200:intron	25.0%
!	AATATAGTTAACCTGTTTCA+TGG	-	chr7_2:71939959-71939978	None:intergenic	25.0%
!	TTTGTTAAATGTGAAGGAAT+TGG	+	chr7_2:71940034-71940053	Msa1074200:intron	25.0%
!!	TTTTCAATTAAGATATAGGG+TGG	+	chr7_2:71940062-71940081	Msa1074200:intron	25.0%
!	TCTCATGTTAATTGACATTA+TGG	+	chr7_2:71940140-71940159	Msa1074200:intron	25.0%
!	CTCATGTTAATTGACATTAT+GGG	+	chr7_2:71940141-71940160	Msa1074200:intron	25.0%
!	TCATGTTAATTGACATTATG+GGG	+	chr7_2:71940142-71940161	Msa1074200:intron	25.0%
!!!	TCATTGTTTATTTTTGAAGG+AGG	+	chr7_2:71940228-71940247	Msa1074200:intron	25.0%
!	ATAGAAAATTCAATGTTGGT+GGG	+	chr7_2:71940251-71940270	Msa1074200:intron	25.0%
!	AAGCTAAAGATGATGATAAA+AGG	+	chr7_2:71940933-71940952	Msa1074200:CDS	25.0%
!	TAGAAAGATAAAGAGAAAGA+AGG	+	chr7_2:71939069-71939088	Msa1074200:five_prime_UTR	25.0%
!!	AATATTTAAGATTGATGGAG+AGG	-	chr7_2:71939209-71939228	None:intergenic	25.0%
!	AATATACGATCAATTTGGAA+TGG	-	chr7_2:71939778-71939797	None:intergenic	25.0%
!	ATAAACAGAGAAAAAATGGA+TGG	+	chr7_2:71939864-71939883	Msa1074200:intron	25.0%
!!!	GTTTTGTTAAGAAAAAGGAT+AGG	+	chr7_2:71939902-71939921	Msa1074200:intron	25.0%
!	AATATAGTTAACCTGTTTCA+TGG	-	chr7_2:71939959-71939978	None:intergenic	25.0%
!	TTTGTTAAATGTGAAGGAAT+TGG	+	chr7_2:71940034-71940053	Msa1074200:intron	25.0%
!!	TTTTCAATTAAGATATAGGG+TGG	+	chr7_2:71940062-71940081	Msa1074200:intron	25.0%
!	TCTCATGTTAATTGACATTA+TGG	+	chr7_2:71940140-71940159	Msa1074200:intron	25.0%
!	CTCATGTTAATTGACATTAT+GGG	+	chr7_2:71940141-71940160	Msa1074200:intron	25.0%
!	TCATGTTAATTGACATTATG+GGG	+	chr7_2:71940142-71940161	Msa1074200:intron	25.0%
!!!	TCATTGTTTATTTTTGAAGG+AGG	+	chr7_2:71940228-71940247	Msa1074200:intron	25.0%
!	ATAGAAAATTCAATGTTGGT+GGG	+	chr7_2:71940251-71940270	Msa1074200:intron	25.0%
!	AAGCTAAAGATGATGATAAA+AGG	+	chr7_2:71940933-71940952	Msa1074200:CDS	25.0%
!	CCTCTTTTTATATAGTCTCA+AGG	-	chr7_2:71939005-71939024	None:intergenic	30.0%
	CCTTGAGACTATATAAAAAG+AGG	+	chr7_2:71939002-71939021	Msa1074200:five_prime_UTR	30.0%
!!	AGAAGATTGTTTTGTGAAGA+AGG	-	chr7_2:71939261-71939280	None:intergenic	30.0%
	ATGTATGTCTTCAACAAGAA+GGG	-	chr7_2:71939399-71939418	None:intergenic	30.0%
	TTAGATGTATGTACGTACAT+AGG	-	chr7_2:71939574-71939593	None:intergenic	30.0%
	TCAACACAAAAACCTAAACT+AGG	-	chr7_2:71939989-71940008	None:intergenic	30.0%
!!!	CTAGGTTTTGTTAAATGTGA+AGG	+	chr7_2:71940028-71940047	Msa1074200:intron	30.0%
	CATGTTAATTGACATTATGG+GGG	+	chr7_2:71940143-71940162	Msa1074200:intron	30.0%
	GACTTGTGAGTTTGAATTTA+AGG	-	chr7_2:71940193-71940212	None:intergenic	30.0%
	GAGGATAGAAAATTCAATGT+TGG	+	chr7_2:71940247-71940266	Msa1074200:intron	30.0%
	GATAGAAAATTCAATGTTGG+TGG	+	chr7_2:71940250-71940269	Msa1074200:intron	30.0%
	ACAACACTTAATAAGCAACA+TGG	+	chr7_2:71940408-71940427	Msa1074200:intron	30.0%
	TCTTTCATGATGAACTTAAG+TGG	+	chr7_2:71940527-71940546	Msa1074200:intron	30.0%
	TAAAGTTGCAACAAGTAGAT+GGG	+	chr7_2:71940619-71940638	Msa1074200:CDS	30.0%
	TGCAATGAAAGATTCAAGAA+AGG	+	chr7_2:71940647-71940666	Msa1074200:CDS	30.0%
	GTGTAAAGAACTACTTGATT+TGG	+	chr7_2:71940877-71940896	Msa1074200:CDS	30.0%
	TACCAAAAAAATGGAAGAAG+AGG	+	chr7_2:71940910-71940929	Msa1074200:CDS	30.0%
!!!	TTCCTCTTCTTCCATTTTTT+TGG	-	chr7_2:71940915-71940934	None:intergenic	30.0%
	AAGGAGAAAGAAGGATTAAA+AGG	+	chr7_2:71940990-71941009	Msa1074200:CDS	30.0%
!	CCTCTTTTTATATAGTCTCA+AGG	-	chr7_2:71939005-71939024	None:intergenic	30.0%
	CCTTGAGACTATATAAAAAG+AGG	+	chr7_2:71939002-71939021	Msa1074200:five_prime_UTR	30.0%
!!	AGAAGATTGTTTTGTGAAGA+AGG	-	chr7_2:71939261-71939280	None:intergenic	30.0%
	ATGTATGTCTTCAACAAGAA+GGG	-	chr7_2:71939399-71939418	None:intergenic	30.0%
	TTAGATGTATGTACGTACAT+AGG	-	chr7_2:71939574-71939593	None:intergenic	30.0%
	TCAACACAAAAACCTAAACT+AGG	-	chr7_2:71939989-71940008	None:intergenic	30.0%
!!!	CTAGGTTTTGTTAAATGTGA+AGG	+	chr7_2:71940028-71940047	Msa1074200:intron	30.0%
	CATGTTAATTGACATTATGG+GGG	+	chr7_2:71940143-71940162	Msa1074200:intron	30.0%
	GACTTGTGAGTTTGAATTTA+AGG	-	chr7_2:71940193-71940212	None:intergenic	30.0%
	GAGGATAGAAAATTCAATGT+TGG	+	chr7_2:71940247-71940266	Msa1074200:intron	30.0%
	GATAGAAAATTCAATGTTGG+TGG	+	chr7_2:71940250-71940269	Msa1074200:intron	30.0%
	ACAACACTTAATAAGCAACA+TGG	+	chr7_2:71940408-71940427	Msa1074200:intron	30.0%
	TCTTTCATGATGAACTTAAG+TGG	+	chr7_2:71940527-71940546	Msa1074200:intron	30.0%
	TAAAGTTGCAACAAGTAGAT+GGG	+	chr7_2:71940619-71940638	Msa1074200:CDS	30.0%
	TGCAATGAAAGATTCAAGAA+AGG	+	chr7_2:71940647-71940666	Msa1074200:CDS	30.0%
	GTGTAAAGAACTACTTGATT+TGG	+	chr7_2:71940877-71940896	Msa1074200:CDS	30.0%
	TACCAAAAAAATGGAAGAAG+AGG	+	chr7_2:71940910-71940929	Msa1074200:CDS	30.0%
!!!	TTCCTCTTCTTCCATTTTTT+TGG	-	chr7_2:71940915-71940934	None:intergenic	30.0%
	AAGGAGAAAGAAGGATTAAA+AGG	+	chr7_2:71940990-71941009	Msa1074200:CDS	30.0%
	AGGAGTAGTTATTAGTGAGA+AGG	+	chr7_2:71939338-71939357	Msa1074200:CDS	35.0%
	GGAGTAGTTATTAGTGAGAA+GGG	+	chr7_2:71939339-71939358	Msa1074200:CDS	35.0%
	TATTAGTGAGAAGGGATTGT+TGG	+	chr7_2:71939347-71939366	Msa1074200:CDS	35.0%
	CATGTATGTCTTCAACAAGA+AGG	-	chr7_2:71939400-71939419	None:intergenic	35.0%
	CTTGTTGAAGACATACATGT+TGG	+	chr7_2:71939401-71939420	Msa1074200:CDS	35.0%
!!!	GCAACTTCTCTAGTTTTGTA+CGG	+	chr7_2:71939538-71939557	Msa1074200:CDS	35.0%
	ATTAACATGAGAAACGAGGA+TGG	-	chr7_2:71940132-71940151	None:intergenic	35.0%
	GTCAATTAACATGAGAAACG+AGG	-	chr7_2:71940136-71940155	None:intergenic	35.0%
	TAATTGACATTATGGGGGTT+TGG	+	chr7_2:71940148-71940167	Msa1074200:intron	35.0%
!	TGAGTAAAGCACCATTAGTA+AGG	+	chr7_2:71940437-71940456	Msa1074200:intron	35.0%
!	GTTTTATGGTGCCTTACTAA+TGG	-	chr7_2:71940451-71940470	None:intergenic	35.0%
	TACCTATTTGTGGGATGTAT+AGG	+	chr7_2:71940589-71940608	Msa1074200:intron	35.0%
	ACCTATTTGTGGGATGTATA+GGG	+	chr7_2:71940590-71940609	Msa1074200:intron	35.0%
	GTAAAGTTGCAACAAGTAGA+TGG	+	chr7_2:71940618-71940637	Msa1074200:CDS	35.0%
	ATCATCAACCTCATCAACTT+CGG	+	chr7_2:71940769-71940788	Msa1074200:CDS	35.0%
!	ATAAAAGGCCAATGCTGTTT+GGG	+	chr7_2:71940948-71940967	Msa1074200:CDS	35.0%
	ATGTTCAACAAGGAGAAAGA+AGG	+	chr7_2:71940981-71941000	Msa1074200:CDS	35.0%
	AGGAGTAGTTATTAGTGAGA+AGG	+	chr7_2:71939338-71939357	Msa1074200:CDS	35.0%
	GGAGTAGTTATTAGTGAGAA+GGG	+	chr7_2:71939339-71939358	Msa1074200:CDS	35.0%
	TATTAGTGAGAAGGGATTGT+TGG	+	chr7_2:71939347-71939366	Msa1074200:CDS	35.0%
	CATGTATGTCTTCAACAAGA+AGG	-	chr7_2:71939400-71939419	None:intergenic	35.0%
	CTTGTTGAAGACATACATGT+TGG	+	chr7_2:71939401-71939420	Msa1074200:CDS	35.0%
!!!	GCAACTTCTCTAGTTTTGTA+CGG	+	chr7_2:71939538-71939557	Msa1074200:CDS	35.0%
	ATTAACATGAGAAACGAGGA+TGG	-	chr7_2:71940132-71940151	None:intergenic	35.0%
	GTCAATTAACATGAGAAACG+AGG	-	chr7_2:71940136-71940155	None:intergenic	35.0%
	TAATTGACATTATGGGGGTT+TGG	+	chr7_2:71940148-71940167	Msa1074200:intron	35.0%
!	TGAGTAAAGCACCATTAGTA+AGG	+	chr7_2:71940437-71940456	Msa1074200:intron	35.0%
!	GTTTTATGGTGCCTTACTAA+TGG	-	chr7_2:71940451-71940470	None:intergenic	35.0%
	TACCTATTTGTGGGATGTAT+AGG	+	chr7_2:71940589-71940608	Msa1074200:intron	35.0%
	ACCTATTTGTGGGATGTATA+GGG	+	chr7_2:71940590-71940609	Msa1074200:intron	35.0%
	GTAAAGTTGCAACAAGTAGA+TGG	+	chr7_2:71940618-71940637	Msa1074200:CDS	35.0%
	ATCATCAACCTCATCAACTT+CGG	+	chr7_2:71940769-71940788	Msa1074200:CDS	35.0%
!	ATAAAAGGCCAATGCTGTTT+GGG	+	chr7_2:71940948-71940967	Msa1074200:CDS	35.0%
	ATGTTCAACAAGGAGAAAGA+AGG	+	chr7_2:71940981-71941000	Msa1074200:CDS	35.0%
	CTTGCATTTCTCATGAACTG+TGG	+	chr7_2:71939119-71939138	Msa1074200:five_prime_UTR	40.0%
	TCGTGTTGGGTTTCTATTGT+TGG	+	chr7_2:71939144-71939163	Msa1074200:five_prime_UTR	40.0%
	CGTGTTGGGTTTCTATTGTT+GGG	+	chr7_2:71939145-71939164	Msa1074200:five_prime_UTR	40.0%
	GTGTTGGGTTTCTATTGTTG+GGG	+	chr7_2:71939146-71939165	Msa1074200:five_prime_UTR	40.0%
!	GATATCACACCATCGGTTAT+CGG	-	chr7_2:71939435-71939454	None:intergenic	40.0%
!!	TATGCTTGAAGAGTGTTGGA+AGG	-	chr7_2:71939518-71939537	None:intergenic	40.0%
!	TTGCTATGCTTGAAGAGTGT+TGG	-	chr7_2:71939522-71939541	None:intergenic	40.0%
	TCATGAGTACTCCATGAAAC+AGG	+	chr7_2:71939945-71939964	Msa1074200:intron	40.0%
!!	ATTATGGGGGTTTGGTAATG+AGG	+	chr7_2:71940156-71940175	Msa1074200:intron	40.0%
	TCCCTATACATCCCACAAAT+AGG	-	chr7_2:71940594-71940613	None:intergenic	40.0%
	GAGAGTTACTATCCGAGATT+CGG	+	chr7_2:71940675-71940694	Msa1074200:CDS	40.0%
!	AGCTTTTCTTCTCCGAATCT+CGG	-	chr7_2:71940690-71940709	None:intergenic	40.0%
	AGATTCGGAGAAGAAAAGCT+TGG	+	chr7_2:71940690-71940709	Msa1074200:CDS	40.0%
	GAGCAACAAGCAACAACAAA+CGG	+	chr7_2:71940712-71940731	Msa1074200:CDS	40.0%
	TCATCAACCTCATCAACTTC+GGG	+	chr7_2:71940770-71940789	Msa1074200:CDS	40.0%
!	TTCGGGTTACACTAATCTAG+TGG	+	chr7_2:71940787-71940806	Msa1074200:CDS	40.0%
	TGAAAACAAGCGACTCAAAG+AGG	+	chr7_2:71940811-71940830	Msa1074200:CDS	40.0%
	CTGAGCTAACAAGCATGAAA+AGG	+	chr7_2:71940852-71940871	Msa1074200:CDS	40.0%
	GATAAAAGGCCAATGCTGTT+TGG	+	chr7_2:71940947-71940966	Msa1074200:CDS	40.0%
!	TAAAAGGCCAATGCTGTTTG+GGG	+	chr7_2:71940949-71940968	Msa1074200:CDS	40.0%
	GTGAGATTGGATGTTCAACA+AGG	+	chr7_2:71940971-71940990	Msa1074200:CDS	40.0%
	CTTGCATTTCTCATGAACTG+TGG	+	chr7_2:71939119-71939138	Msa1074200:five_prime_UTR	40.0%
	TCGTGTTGGGTTTCTATTGT+TGG	+	chr7_2:71939144-71939163	Msa1074200:five_prime_UTR	40.0%
	CGTGTTGGGTTTCTATTGTT+GGG	+	chr7_2:71939145-71939164	Msa1074200:five_prime_UTR	40.0%
	GTGTTGGGTTTCTATTGTTG+GGG	+	chr7_2:71939146-71939165	Msa1074200:five_prime_UTR	40.0%
!	GATATCACACCATCGGTTAT+CGG	-	chr7_2:71939435-71939454	None:intergenic	40.0%
!!	TATGCTTGAAGAGTGTTGGA+AGG	-	chr7_2:71939518-71939537	None:intergenic	40.0%
!	TTGCTATGCTTGAAGAGTGT+TGG	-	chr7_2:71939522-71939541	None:intergenic	40.0%
	TCATGAGTACTCCATGAAAC+AGG	+	chr7_2:71939945-71939964	Msa1074200:intron	40.0%
!!	ATTATGGGGGTTTGGTAATG+AGG	+	chr7_2:71940156-71940175	Msa1074200:intron	40.0%
	TCCCTATACATCCCACAAAT+AGG	-	chr7_2:71940594-71940613	None:intergenic	40.0%
	GAGAGTTACTATCCGAGATT+CGG	+	chr7_2:71940675-71940694	Msa1074200:CDS	40.0%
!	AGCTTTTCTTCTCCGAATCT+CGG	-	chr7_2:71940690-71940709	None:intergenic	40.0%
	AGATTCGGAGAAGAAAAGCT+TGG	+	chr7_2:71940690-71940709	Msa1074200:CDS	40.0%
	GAGCAACAAGCAACAACAAA+CGG	+	chr7_2:71940712-71940731	Msa1074200:CDS	40.0%
	TCATCAACCTCATCAACTTC+GGG	+	chr7_2:71940770-71940789	Msa1074200:CDS	40.0%
!	TTCGGGTTACACTAATCTAG+TGG	+	chr7_2:71940787-71940806	Msa1074200:CDS	40.0%
	TGAAAACAAGCGACTCAAAG+AGG	+	chr7_2:71940811-71940830	Msa1074200:CDS	40.0%
	CTGAGCTAACAAGCATGAAA+AGG	+	chr7_2:71940852-71940871	Msa1074200:CDS	40.0%
	GATAAAAGGCCAATGCTGTT+TGG	+	chr7_2:71940947-71940966	Msa1074200:CDS	40.0%
!	TAAAAGGCCAATGCTGTTTG+GGG	+	chr7_2:71940949-71940968	Msa1074200:CDS	40.0%
	GTGAGATTGGATGTTCAACA+AGG	+	chr7_2:71940971-71940990	Msa1074200:CDS	40.0%
	ATGAACTGTGGAGTCGTGTT+GGG	+	chr7_2:71939131-71939150	Msa1074200:five_prime_UTR	45.0%
	TGGGTTTCTATTGTTGGGGT+TGG	+	chr7_2:71939150-71939169	Msa1074200:five_prime_UTR	45.0%
	GGGTTTCTATTGTTGGGGTT+GGG	+	chr7_2:71939151-71939170	Msa1074200:five_prime_UTR	45.0%
	GAGAAGGGATTGTTGGAATG+TGG	+	chr7_2:71939354-71939373	Msa1074200:CDS	45.0%
	GTCTTCAACAAGAAGGGTGA+TGG	-	chr7_2:71939393-71939412	None:intergenic	45.0%
	GAAGACATACATGTTGGTCG+AGG	+	chr7_2:71939407-71939426	Msa1074200:CDS	45.0%
	TAACCGATGGTGTGATATCG+TGG	+	chr7_2:71939436-71939455	Msa1074200:CDS	45.0%
	GTTCCACGATATCACACCAT+CGG	-	chr7_2:71939442-71939461	None:intergenic	45.0%
	GTGATATCGTGGAACGATGA+AGG	+	chr7_2:71939447-71939466	Msa1074200:CDS	45.0%
	ATCGTGGAACGATGAAGGAA+CGG	+	chr7_2:71939452-71939471	Msa1074200:CDS	45.0%
	TCTCTCCCTATTCAATACCC+CGG	+	chr7_2:71940105-71940124	Msa1074200:intron	45.0%
!!	ATGGTCCGGGGTATTGAATA+GGG	-	chr7_2:71940113-71940132	None:intergenic	45.0%
!!	AGTGTAACCCGAAGTTGATG+AGG	-	chr7_2:71940780-71940799	None:intergenic	45.0%
	GCGACTCAAAGAGGAAAATG+TGG	+	chr7_2:71940820-71940839	Msa1074200:CDS	45.0%
	AATCTCACCCCAAACAGCAT+TGG	-	chr7_2:71940959-71940978	None:intergenic	45.0%
!	AATGCTGTTTGGGGTGAGAT+TGG	+	chr7_2:71940958-71940977	Msa1074200:CDS	45.0%
	ATGAACTGTGGAGTCGTGTT+GGG	+	chr7_2:71939131-71939150	Msa1074200:five_prime_UTR	45.0%
	TGGGTTTCTATTGTTGGGGT+TGG	+	chr7_2:71939150-71939169	Msa1074200:five_prime_UTR	45.0%
	GGGTTTCTATTGTTGGGGTT+GGG	+	chr7_2:71939151-71939170	Msa1074200:five_prime_UTR	45.0%
	GAGAAGGGATTGTTGGAATG+TGG	+	chr7_2:71939354-71939373	Msa1074200:CDS	45.0%
	GTCTTCAACAAGAAGGGTGA+TGG	-	chr7_2:71939393-71939412	None:intergenic	45.0%
	GAAGACATACATGTTGGTCG+AGG	+	chr7_2:71939407-71939426	Msa1074200:CDS	45.0%
	TAACCGATGGTGTGATATCG+TGG	+	chr7_2:71939436-71939455	Msa1074200:CDS	45.0%
	GTTCCACGATATCACACCAT+CGG	-	chr7_2:71939442-71939461	None:intergenic	45.0%
	GTGATATCGTGGAACGATGA+AGG	+	chr7_2:71939447-71939466	Msa1074200:CDS	45.0%
	ATCGTGGAACGATGAAGGAA+CGG	+	chr7_2:71939452-71939471	Msa1074200:CDS	45.0%
	TCTCTCCCTATTCAATACCC+CGG	+	chr7_2:71940105-71940124	Msa1074200:intron	45.0%
!!	ATGGTCCGGGGTATTGAATA+GGG	-	chr7_2:71940113-71940132	None:intergenic	45.0%
!!	AGTGTAACCCGAAGTTGATG+AGG	-	chr7_2:71940780-71940799	None:intergenic	45.0%
	GCGACTCAAAGAGGAAAATG+TGG	+	chr7_2:71940820-71940839	Msa1074200:CDS	45.0%
	AATCTCACCCCAAACAGCAT+TGG	-	chr7_2:71940959-71940978	None:intergenic	45.0%
!	AATGCTGTTTGGGGTGAGAT+TGG	+	chr7_2:71940958-71940977	Msa1074200:CDS	45.0%
	CATGAACTGTGGAGTCGTGT+TGG	+	chr7_2:71939130-71939149	Msa1074200:five_prime_UTR	50.0%
	ATATCACGAGCAAACTCCGC+CGG	-	chr7_2:71939495-71939514	None:intergenic	50.0%
!!	GATGGTCCGGGGTATTGAAT+AGG	-	chr7_2:71940114-71940133	None:intergenic	50.0%
	ATGAGAAACGAGGATGGTCC+GGG	-	chr7_2:71940126-71940145	None:intergenic	50.0%
	CATGAGAAACGAGGATGGTC+CGG	-	chr7_2:71940127-71940146	None:intergenic	50.0%
	CATGAACTGTGGAGTCGTGT+TGG	+	chr7_2:71939130-71939149	Msa1074200:five_prime_UTR	50.0%
	ATATCACGAGCAAACTCCGC+CGG	-	chr7_2:71939495-71939514	None:intergenic	50.0%
!!	GATGGTCCGGGGTATTGAAT+AGG	-	chr7_2:71940114-71940133	None:intergenic	50.0%
	ATGAGAAACGAGGATGGTCC+GGG	-	chr7_2:71940126-71940145	None:intergenic	50.0%
	CATGAGAAACGAGGATGGTC+CGG	-	chr7_2:71940127-71940146	None:intergenic	50.0%
	GTCGAGGATCCGATAACCGA+TGG	+	chr7_2:71939423-71939442	Msa1074200:CDS	55.0%
	CGATGAAGGAACGGCGTTTG+TGG	+	chr7_2:71939461-71939480	Msa1074200:CDS	55.0%
	AAGGAACGGCGTTTGTGGTG+TGG	+	chr7_2:71939466-71939485	Msa1074200:CDS	55.0%
	TGAGAAACGAGGATGGTCCG+GGG	-	chr7_2:71940125-71940144	None:intergenic	55.0%
	GTCGAGGATCCGATAACCGA+TGG	+	chr7_2:71939423-71939442	Msa1074200:CDS	55.0%
	CGATGAAGGAACGGCGTTTG+TGG	+	chr7_2:71939461-71939480	Msa1074200:CDS	55.0%
	AAGGAACGGCGTTTGTGGTG+TGG	+	chr7_2:71939466-71939485	Msa1074200:CDS	55.0%
	TGAGAAACGAGGATGGTCCG+GGG	-	chr7_2:71940125-71940144	None:intergenic	55.0%
	GGCGTTTGTGGTGTGGCAGC+CGG	+	chr7_2:71939473-71939492	Msa1074200:CDS	65.0%
	GTTTGTGGTGTGGCAGCCGG+CGG	+	chr7_2:71939476-71939495	Msa1074200:CDS	65.0%
	GGCGTTTGTGGTGTGGCAGC+CGG	+	chr7_2:71939473-71939492	Msa1074200:CDS	65.0%
	GTTTGTGGTGTGGCAGCCGG+CGG	+	chr7_2:71939476-71939495	Msa1074200:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	71938986	71941069	71938986	ID=Msa1074200;Name=Msa1074200
chr7_2	mRNA	71938986	71941069	71938986	ID=Msa1074200-mRNA-1;Parent=Msa1074200;Name=Msa1074200-mRNA-1;_AED=0.06;_eAED=0.06;_QI=347\|1\|0.5\|1\|1\|1\|2\|0\|233
chr7_2	exon	71938986	71939575	71938986	ID=Msa1074200-mRNA-1:exon:16417;Parent=Msa1074200-mRNA-1
chr7_2	exon	71940611	71941069	71940611	ID=Msa1074200-mRNA-1:exon:16418;Parent=Msa1074200-mRNA-1
chr7_2	five_prime_UTR	71938986	71939332	71938986	ID=Msa1074200-mRNA-1:five_prime_utr;Parent=Msa1074200-mRNA-1
chr7_2	CDS	71939333	71939575	71939333	ID=Msa1074200-mRNA-1:cds;Parent=Msa1074200-mRNA-1
chr7_2	CDS	71940611	71941069	71940611	ID=Msa1074200-mRNA-1:cds;Parent=Msa1074200-mRNA-1

Gene Sequence

>Msa1074200

ATGGAAGGAGTAGTTATTAGTGAGAAGGGATTGTTGGAATGTGGAAGAAAGTGCAGTCCATCACCCTTCTTGTTGAAGACATACATGTTGGTCGAGGATCCGATAACCGATGGTGTGATATCGTGGAACGATGAAGGAACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATATCCTTCCAACACTCTTCAAGCATAGCAACTTCTCTAGTTTTGTACGGCAGCTCAATACCTATGGATTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTGCAATGAAAGATTCAAGAAAGGTGAAAGAGAGTTACTATCCGAGATTCGGAGAAGAAAAGCTTGGAGCAACAAGCAACAACAAACGGTACAAAATCAAGATTCTGATGAAGATCAAAGATCATCATCAACCTCATCAACTTCGGGTTACACTAATCTAGTGGATGAAAACAAGCGACTCAAAGAGGAAAATGTGGTGTTGAATTCTGAGCTAACAAGCATGAAAAGGAAGTGTAAAGAACTACTTGATTTGGTTTCAATTTATACCAAAAAAATGGAAGAAGAGGAAGCTAAAGATGATGATAAAAGGCCAATGCTGTTTGGGGTGAGATTGGATGTTCAACAAGGAGAAAGAAGGATTAAAAGGACTAGAGCTGAGATTAGTGAAAACGCAAGCATTTTGTTGTCTCAATCATGCAAATAG

Protein sequence

>Msa1074200

MEGVVISEKGLLECGRKCSPSPFLLKTYMLVEDPITDGVISWNDEGTAFVVWQPAEFARDILPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNERFKKGERELLSEIRRRKAWSNKQQQTVQNQDSDEDQRSSSTSSTSGYTNLVDENKRLKEENVVLNSELTSMKRKCKELLDLVSIYTKKMEEEEAKDDDKRPMLFGVRLDVQQGERRIKRTRAEISENASILLSQSCK*