AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1136760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136760 MtrunA17_Chr7g0259291 95.697 581 23 2 1 580 1 580 0.0 1154
Msa1136760 MtrunA17_Chr7g0259401 85.870 276 11 3 131 405 1 249 2.47e-169 481
Msa1136760 MtrunA17_Chr7g0275471 35.140 572 339 14 5 565 11 561 1.60e-96 306
Msa1136760 MtrunA17_Chr8g0347381 33.275 574 350 15 5 568 11 561 1.13e-90 290
Msa1136760 MtrunA17_Chr8g0347421 33.682 573 349 14 5 568 11 561 8.98e-90 288
Msa1136760 MtrunA17_Chr5g0421331 30.944 572 366 11 4 569 19 567 5.42e-87 281
Msa1136760 MtrunA17_Chr8g0347391 32.000 575 356 14 5 568 18 568 1.18e-85 277
Msa1136760 MtrunA17_Chr2g0318991 31.058 586 354 14 11 569 20 582 1.68e-83 272
Msa1136760 MtrunA17_Chr5g0401641 29.809 577 375 12 5 569 21 579 1.63e-80 264
Msa1136760 MtrunA17_Chr8g0361551 30.189 583 372 13 4 568 14 579 4.17e-79 261
Msa1136760 MtrunA17_Chr1g0195771 30.123 571 371 12 5 559 54 612 2.38e-78 259
Msa1136760 MtrunA17_Chr4g0023301 31.006 487 313 9 91 568 9 481 1.35e-76 251
Msa1136760 MtrunA17_Chr4g0022401 31.051 409 259 10 5 397 19 420 2.20e-66 223
Msa1136760 MtrunA17_Chr8g0347431 33.508 382 232 8 184 559 11 376 4.63e-64 215
Msa1136760 MtrunA17_Chr5g0401631 32.713 376 234 6 198 569 1 361 3.54e-62 210
Msa1136760 MtrunA17_Chr8g0352391 28.763 299 150 7 266 559 7 247 1.98e-26 108
Msa1136760 MtrunA17_Chr1g0169871 37.209 172 99 3 316 482 138 305 7.19e-26 108
Msa1136760 MtrunA17_Chr8g0352401 36.220 127 77 2 5 131 2 124 2.21e-19 84.3
Msa1136760 MtrunA17_Chr8g0347441 40.000 105 61 1 5 109 11 113 2.05e-16 76.3
Msa1136760 MtrunA17_Chr4g0022391 29.730 185 108 6 398 575 11 180 9.32e-16 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1136760 AT1G28130.1 30.465 581 378 8 8 569 14 587 5.93e-94 300
Msa1136760 AT1G59500.1 31.414 573 372 11 3 569 19 576 6.88e-94 300
Msa1136760 AT1G23160.1 32.297 579 352 13 8 570 15 569 1.03e-91 293
Msa1136760 AT5G13320.3 31.754 570 363 11 9 569 13 565 2.91e-90 290
Msa1136760 AT5G13320.1 31.754 570 363 11 9 569 13 565 2.91e-90 290
Msa1136760 AT1G48660.1 32.815 579 355 12 8 575 7 562 4.60e-90 289
Msa1136760 AT5G13320.2 32.281 570 360 12 9 569 28 580 5.87e-90 289
Msa1136760 AT1G48660.2 32.759 580 357 13 8 575 7 565 7.76e-90 288
Msa1136760 AT4G37390.1 30.862 580 370 12 4 569 20 582 4.56e-88 285
Msa1136760 AT2G23170.1 30.541 573 374 11 4 569 19 574 2.38e-87 283
Msa1136760 AT4G03400.2 31.481 594 366 15 5 575 9 584 7.97e-86 278
Msa1136760 AT4G03400.1 31.481 594 366 15 5 575 9 584 7.97e-86 278
Msa1136760 AT5G13360.1 32.105 570 360 13 11 569 17 570 9.43e-86 278
Msa1136760 AT5G13360.2 32.105 570 360 13 11 569 17 570 9.43e-86 278
Msa1136760 AT2G14960.1 30.261 575 367 11 4 569 19 568 2.88e-85 277
Msa1136760 AT5G13360.3 32.105 570 360 13 11 569 95 648 4.29e-85 279
Msa1136760 AT5G51470.1 31.746 567 361 11 11 570 16 563 7.67e-85 276
Msa1136760 AT2G46370.1 32.292 576 354 16 5 568 11 562 5.63e-84 273
Msa1136760 AT2G46370.2 32.292 576 354 16 5 568 11 562 5.63e-84 273
Msa1136760 AT2G46370.4 32.292 576 354 16 5 568 22 573 6.10e-84 273
Msa1136760 AT4G27260.1 31.434 579 362 12 8 568 25 586 2.73e-83 272
Msa1136760 AT5G13370.1 31.349 571 364 11 11 569 17 571 2.00e-82 270
Msa1136760 AT5G54510.1 30.743 579 366 12 8 568 25 586 1.78e-81 268
Msa1136760 AT5G13350.1 30.473 571 369 12 11 569 17 571 8.35e-80 263
Msa1136760 AT5G13350.2 30.473 571 369 12 11 569 17 571 8.35e-80 263
Msa1136760 AT2G47750.1 31.250 576 354 17 5 562 9 560 7.81e-78 257
Msa1136760 AT5G13380.1 30.634 568 371 11 11 569 47 600 1.88e-76 254
Msa1136760 AT1G28130.2 31.207 439 281 5 149 569 9 444 4.94e-75 246
Msa1136760 AT5G51470.2 31.493 489 312 9 89 570 1 473 8.50e-73 241
Msa1136760 AT2G46370.3 32.150 507 310 14 72 568 1 483 2.90e-72 240
Msa1136760 AT1G48670.1 29.655 580 337 12 1 575 1 514 3.56e-72 241
Msa1136760 AT1G48670.2 33.496 409 256 6 172 575 6 403 2.95e-71 235

Find 119 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAAGCTGCCTCCTTTCT+TGG 0.216718 7_4:-5522694 Msa1136760:CDS
TACAACTAAACGTGGCTTAA+AGG 0.223574 7_4:-5522467 Msa1136760:CDS
TCATGATTCCTTATAATCTT+TGG 0.243867 7_4:+5521257 None:intergenic
CTCTTCTCTGCTTCTTCTAT+AGG 0.284728 7_4:-5523037 Msa1136760:intron
TTTCGATCAGTTATCAGATT+TGG 0.291888 7_4:-5521318 Msa1136760:CDS
AGTCCCCTGGAAGTTATAAT+TGG 0.292019 7_4:-5522373 Msa1136760:CDS
CGCTCAATCCTTCAACATAA+TGG 0.298742 7_4:-5523218 Msa1136760:CDS
TGTTGAGTTTGCAAGTTTCT+TGG 0.299538 7_4:-5521543 Msa1136760:CDS
TCCTCTCTTGAGAATGGTTT+AGG 0.317132 7_4:-5521413 Msa1136760:CDS
TCAAAGTAAGGGATCAGTTT+TGG 0.319994 7_4:+5522727 None:intergenic
CATAGGATCTTGTTTACATT+TGG 0.326061 7_4:+5522517 None:intergenic
AGTTTGTGAAGGTAAGAATT+GGG 0.327806 7_4:-5522095 Msa1136760:CDS
ATAAGCCACCAAAGATTATA+AGG 0.328611 7_4:-5521265 Msa1136760:CDS
TCATGAAGTTGTCAAGTTCT+TGG 0.335217 7_4:-5521240 Msa1136760:CDS
ATAAATACCTTCAACTGCTT+TGG 0.348086 7_4:+5521506 None:intergenic
TAGATCCAATTATAACTTCC+AGG 0.355197 7_4:+5522368 None:intergenic
AGGAATCTTGATGTTATAGA+TGG 0.357105 7_4:-5522304 Msa1136760:CDS
ATCTTGTTTACATTTGGCCT+TGG 0.360685 7_4:+5522523 None:intergenic
TACAAGGTGCAGAGAGAAAA+AGG 0.360703 7_4:-5521383 Msa1136760:CDS
GGCGATATAGTTAGAGTTGT+TGG 0.370089 7_4:-5521713 Msa1136760:CDS
GAAAGGCTTGAATCAAAGTA+AGG 0.381997 7_4:+5522715 None:intergenic
GTTTGCAAGTTTCTTGGATC+AGG 0.392810 7_4:-5521537 Msa1136760:CDS
TCATCTGAAATTTCATGACT+TGG 0.392995 7_4:+5522187 None:intergenic
GCCACCTTCTCTGTGGCCTT+AGG 0.400497 7_4:-5522324 Msa1136760:CDS
TAGTTTGTGAAGGTAAGAAT+TGG 0.402669 7_4:-5522096 Msa1136760:CDS
TCATTCTCATTCATCTCAAA+TGG 0.405812 7_4:+5521842 None:intergenic
TCTTCATACTCTTTACAAAC+TGG 0.413261 7_4:-5522433 Msa1136760:CDS
TACACATAGCTGCTCCCATT+TGG 0.419597 7_4:+5522228 None:intergenic
TGTATTTCCTCTCTTGAGAA+TGG 0.427898 7_4:-5521419 Msa1136760:CDS
TAGTACGAACCGTGTTGTCT+CGG 0.428215 7_4:+5521895 None:intergenic
TTGTTTACATTTGGCCTTGG+AGG 0.432776 7_4:+5522526 None:intergenic
TAACAGAACCATTATGTTGA+AGG 0.435178 7_4:+5523210 None:intergenic
GGTGGCTTATATTGACTAGC+TGG 0.437086 7_4:+5521278 None:intergenic
TAAACGTGGCTTAAAGGTTA+TGG 0.437413 7_4:-5522461 Msa1136760:CDS
AGTTCATCATCTGTCATCAT+TGG 0.437707 7_4:+5523299 None:intergenic
TTTATCAAGTGCGTTACAAC+AGG 0.439169 7_4:-5522037 Msa1136760:CDS
AAAGTCAACGTAATCATCAT+AGG 0.442906 7_4:+5523115 None:intergenic
ATAGATTGTTTCCGAATGTT+CGG 0.446193 7_4:-5522060 Msa1136760:CDS
TGATTCCTTATAATCTTTGG+TGG 0.451928 7_4:+5521260 None:intergenic
TTAATCAAACCTATGGCATA+AGG 0.457001 7_4:+5522271 None:intergenic
AGTCTAATAACTTGAAGGAA+TGG 0.458645 7_4:-5521460 Msa1136760:CDS
TTTGCTTCTGAGTGTTGTGT+AGG 0.460989 7_4:-5521944 Msa1136760:CDS
AATTTCCATCTTGCACTAAG+AGG 0.462310 7_4:-5521593 Msa1136760:CDS
TCCTACAATCGGTACATCTC+CGG 0.465120 7_4:+5521976 None:intergenic
GAAGCTGTAATCAACACTAT+TGG 0.466393 7_4:-5522154 Msa1136760:CDS
GTCTAATAACTTGAAGGAAT+GGG 0.466720 7_4:-5521459 Msa1136760:CDS
ACCTTCAACTGCTTTGGCAT+CGG 0.468257 7_4:+5521512 None:intergenic
AGTACGAACCGTGTTGTCTC+GGG 0.470826 7_4:+5521896 None:intergenic
GATCGAAAGCTCCTTGCCTT+AGG 0.471571 7_4:+5521333 None:intergenic
GAAGGTATTTATAGAAGTAG+AGG 0.481000 7_4:-5521495 Msa1136760:CDS
CACTTGATAAACCGAACATT+CGG 0.481170 7_4:+5522049 None:intergenic
AAATGCTTTAATCAAACCTA+TGG 0.485080 7_4:+5522264 None:intergenic
ATTAGTACTCCTTATGCCAT+AGG 0.485763 7_4:-5522280 Msa1136760:CDS
GTTTGTGAAGGTAAGAATTG+GGG 0.497604 7_4:-5522094 Msa1136760:CDS
CAAATGTAAACAAGATCCTA+TGG 0.504271 7_4:-5522516 Msa1136760:CDS
ACAGCCTCGGTGACCAAGAA+AGG 0.505851 7_4:+5522681 None:intergenic
GATCTTTGCGGCGTTGAGGT+TGG 0.507445 7_4:-5521791 Msa1136760:CDS
ACCGATGCCAAAGCAGTTGA+AGG 0.508276 7_4:-5521513 Msa1136760:CDS
GCCGGAGATGTACCGATTGT+AGG 0.513506 7_4:-5521977 Msa1136760:CDS
CGTTGACTTTATCCATCAGA+TGG 0.513550 7_4:-5523102 Msa1136760:CDS
GTTCTCCATCAGCCATCTGA+TGG 0.514275 7_4:+5523090 None:intergenic
ACAAGACTTGTGAAAGAAGC+AGG 0.515362 7_4:+5523149 None:intergenic
GAGAATGATGAGGATGTTGT+TGG 0.515858 7_4:-5521827 Msa1136760:CDS
TTGAGCGAAGAGTTTCCAAC+TGG 0.520470 7_4:+5523234 None:intergenic
AAGTAATCTCCTCCTACAAT+CGG 0.525370 7_4:+5521965 None:intergenic
AGAGGAGTCTAATAACTTGA+AGG 0.526734 7_4:-5521465 Msa1136760:CDS
TGCAACGTTCTCTAGTCCCC+TGG 0.529657 7_4:-5522386 Msa1136760:CDS
ATACTCTTTACAAACTGGTA+AGG 0.530086 7_4:-5522428 Msa1136760:CDS
AGAATCTCAGCTGAAGACTT+AGG 0.531876 7_4:+5521647 None:intergenic
AGAAGTAGAGGAAGTTCAAG+AGG 0.534240 7_4:-5521483 Msa1136760:CDS
TTTATCCATCAGATGGCTGA+TGG 0.535596 7_4:-5523095 Msa1136760:CDS
CTATTTGACAATTCATGTTG+AGG 0.536323 7_4:+5522127 None:intergenic
CAACTTGAGGTGATGAATTG+TGG 0.539457 7_4:+5521687 None:intergenic
AGAATAAGATTAGTTTGTGA+AGG 0.542973 7_4:-5522106 Msa1136760:CDS
GAGCAAACAGTGGATCTTTG+CGG 0.554405 7_4:-5521803 Msa1136760:CDS
AGATCCAATTATAACTTCCA+GGG 0.558522 7_4:+5522369 None:intergenic
CTTGCACTAAGAGGTGCTAC+GGG 0.560278 7_4:-5521584 Msa1136760:CDS
TCTTGCACTAAGAGGTGCTA+CGG 0.561894 7_4:-5521585 Msa1136760:CDS
TGTGAAGGTAAGAATTGGGG+TGG 0.563626 7_4:-5522091 Msa1136760:CDS
AAATGGAAGAAACTCAAAGT+AGG 0.564938 7_4:+5521859 None:intergenic
AGTTATAATTGGATCTAATG+TGG 0.566485 7_4:-5522362 Msa1136760:CDS
AACTCAAAGTAGGCAAAAGT+AGG 0.567325 7_4:+5521869 None:intergenic
AAGTCATGAAATTTCAGATG+AGG 0.571087 7_4:-5522185 Msa1136760:CDS
GCTGTATCGCTGTTCTTCAA+AGG 0.571437 7_4:-5522663 Msa1136760:intron
AGTGGATCTTTGCGGCGTTG+AGG 0.572967 7_4:-5521795 Msa1136760:CDS
TAGCACCTCTTAGTGCAAGA+TGG 0.573998 7_4:+5521588 None:intergenic
TGGTTTAGGAGCATTGTACA+AGG 0.576214 7_4:-5521399 Msa1136760:CDS
CTCATAACAAATTCAACTTG+AGG 0.577362 7_4:+5521674 None:intergenic
GATTCCTAAGGCCACAGAGA+AGG 0.577447 7_4:+5522320 None:intergenic
ACTTAATGATAATTATCCTA+AGG 0.579665 7_4:-5521349 Msa1136760:CDS
ATGATAATTATCCTAAGGCA+AGG 0.584299 7_4:-5521344 Msa1136760:CDS
GCTGTAATCAACACTATTGG+TGG 0.584574 7_4:-5522151 Msa1136760:CDS
AAAGGCTTGAATCAAAGTAA+GGG 0.587333 7_4:+5522716 None:intergenic
TCCTAAGGCCACAGAGAAGG+TGG 0.588668 7_4:+5522323 None:intergenic
CTATAGAAGAAGCAGAGAAG+AGG 0.590382 7_4:+5523038 None:intergenic
CTATGTGTAGATCTTGATTG+TGG 0.591963 7_4:-5522214 Msa1136760:CDS
TCCTAAACCATTCTCAAGAG+AGG 0.592651 7_4:+5521412 None:intergenic
CTATAACATCAAGATTCCTA+AGG 0.593541 7_4:+5522308 None:intergenic
GAAGAACAGCGATACAGCCT+CGG 0.604012 7_4:+5522668 None:intergenic
GGATGCAAAACATCACCAGT+TGG 0.610098 7_4:-5523249 Msa1136760:CDS
GGAGATGTACCGATTGTAGG+AGG 0.617561 7_4:-5521974 Msa1136760:CDS
AACGTTGCAAGTTGTTGTTG+AGG 0.618828 7_4:+5522400 None:intergenic
GATGCAGGATGTTTCCTCCA+AGG 0.619465 7_4:-5522540 Msa1136760:intron
ACGAACCGTGTTGTCTCGGG+TGG 0.628593 7_4:+5521899 None:intergenic
TGTCAGCGTAGAGAAACCAT+AGG 0.638254 7_4:+5522500 None:intergenic
CACAACCACCCGAGACAACA+CGG 0.644768 7_4:-5521904 Msa1136760:CDS
GATCCAATTATAACTTCCAG+GGG 0.646433 7_4:+5522370 None:intergenic
GCCTCCTTTCTTGGTCACCG+AGG 0.653577 7_4:-5522685 Msa1136760:CDS
GGTTGGAAAGATGTATGAAG+TGG 0.655471 7_4:-5521774 Msa1136760:CDS
AGTTTGTAAAGAGTATGAAG+AGG 0.658887 7_4:+5522435 None:intergenic
ATTACTACTACAACTAAACG+TGG 0.671461 7_4:-5522475 Msa1136760:CDS
TAATCATCATAGGAAGACAA+AGG 0.675878 7_4:+5523125 None:intergenic
GAAGCTAGAAGAGTTGACAA+TGG 0.676230 7_4:-5523270 Msa1136760:CDS
ATGTATTGCCACCTTCTCTG+TGG 0.676460 7_4:-5522331 Msa1136760:CDS
GCCTCGGTGACCAAGAAAGG+AGG 0.681075 7_4:+5522684 None:intergenic
ATTTGTATCGATAAAATCCG+CGG 0.690641 7_4:+5521738 None:intergenic
TGAGATGAATGAGAATGATG+AGG 0.693524 7_4:-5521837 Msa1136760:CDS
TGTTGTTGGTGAGCAAACAG+TGG 0.703428 7_4:-5521813 Msa1136760:CDS
GTGGTTGTTACTACTTACCG+CGG 0.726364 7_4:-5521755 Msa1136760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTTGTTTATAAATTAT+AGG + chr7_4:5521655-5521674 None:intergenic 10.0%
!!! CAATTTTGTTTATAAATTAT+AGG + chr7_4:5521655-5521674 None:intergenic 10.0%
!!! AATGCAATTTCATTAATTTT+AGG - chr7_4:5521613-5521632 Msa1136760:CDS 15.0%
!!! AATGCAATTTCATTAATTTT+AGG - chr7_4:5521613-5521632 Msa1136760:CDS 15.0%
!!! TTTCAATTAGTTCTTTTTCT+AGG - chr7_4:5521506-5521525 Msa1136760:CDS 20.0%
!! TCAATGATTTAGATCAAAAA+GGG + chr7_4:5521572-5521591 None:intergenic 20.0%
!!! GATTAAAGCATTTAGTTTTT+TGG - chr7_4:5522244-5522263 Msa1136760:CDS 20.0%
!! ACTTAATGATAATTATCCTA+AGG - chr7_4:5523149-5523168 Msa1136760:CDS 20.0%
!!! TTTCAATTAGTTCTTTTTCT+AGG - chr7_4:5521506-5521525 Msa1136760:CDS 20.0%
!! TCAATGATTTAGATCAAAAA+GGG + chr7_4:5521572-5521591 None:intergenic 20.0%
!!! GATTAAAGCATTTAGTTTTT+TGG - chr7_4:5522244-5522263 Msa1136760:CDS 20.0%
!! ACTTAATGATAATTATCCTA+AGG - chr7_4:5523149-5523168 Msa1136760:CDS 20.0%
!!! AACACTTTTGTTATTGTTGA+AGG + chr7_4:5521326-5521345 None:intergenic 25.0%
! TTGAAATGAAGAGTTAAAAG+TGG + chr7_4:5521492-5521511 None:intergenic 25.0%
! TCTGTTATAGGAGAATTTAT+TGG - chr7_4:5521530-5521549 Msa1136760:CDS 25.0%
! GTCAATGATTTAGATCAAAA+AGG + chr7_4:5521573-5521592 None:intergenic 25.0%
!! AAATTGCATTTTCAATGCAA+AGG + chr7_4:5521603-5521622 None:intergenic 25.0%
! ACGTAAGAACTTTCAAAATT+TGG + chr7_4:5521899-5521918 None:intergenic 25.0%
! AGTTATAATTGGATCTAATG+TGG - chr7_4:5522136-5522155 Msa1136760:CDS 25.0%
! AAATGCTTTAATCAAACCTA+TGG + chr7_4:5522237-5522256 None:intergenic 25.0%
!!! AGAATAAGATTAGTTTGTGA+AGG - chr7_4:5522392-5522411 Msa1136760:CDS 25.0%
!!! CAAAAACTTAAGTTTTATGC+CGG - chr7_4:5522503-5522522 Msa1136760:CDS 25.0%
!! GGATTTTATCGATACAAATT+GGG - chr7_4:5522764-5522783 Msa1136760:intron 25.0%
! TCATGATTCCTTATAATCTT+TGG + chr7_4:5523244-5523263 None:intergenic 25.0%
!!! TTCTTTTGTTAGAGTATCAA+TGG - chr7_4:5523288-5523307 Msa1136760:CDS 25.0%
!!! AACACTTTTGTTATTGTTGA+AGG + chr7_4:5521326-5521345 None:intergenic 25.0%
! TTGAAATGAAGAGTTAAAAG+TGG + chr7_4:5521492-5521511 None:intergenic 25.0%
! TCTGTTATAGGAGAATTTAT+TGG - chr7_4:5521530-5521549 Msa1136760:CDS 25.0%
! GTCAATGATTTAGATCAAAA+AGG + chr7_4:5521573-5521592 None:intergenic 25.0%
!! AAATTGCATTTTCAATGCAA+AGG + chr7_4:5521603-5521622 None:intergenic 25.0%
! ACGTAAGAACTTTCAAAATT+TGG + chr7_4:5521899-5521918 None:intergenic 25.0%
! AGTTATAATTGGATCTAATG+TGG - chr7_4:5522136-5522155 Msa1136760:CDS 25.0%
! AAATGCTTTAATCAAACCTA+TGG + chr7_4:5522237-5522256 None:intergenic 25.0%
!!! AGAATAAGATTAGTTTGTGA+AGG - chr7_4:5522392-5522411 Msa1136760:CDS 25.0%
!!! CAAAAACTTAAGTTTTATGC+CGG - chr7_4:5522503-5522522 Msa1136760:CDS 25.0%
!! GGATTTTATCGATACAAATT+GGG - chr7_4:5522764-5522783 Msa1136760:intron 25.0%
! TCATGATTCCTTATAATCTT+TGG + chr7_4:5523244-5523263 None:intergenic 25.0%
!!! TTCTTTTGTTAGAGTATCAA+TGG - chr7_4:5523288-5523307 Msa1136760:CDS 25.0%
TAACAGAACCATTATGTTGA+AGG + chr7_4:5521291-5521310 None:intergenic 30.0%
TAATCATCATAGGAAGACAA+AGG + chr7_4:5521376-5521395 None:intergenic 30.0%
AAAGTCAACGTAATCATCAT+AGG + chr7_4:5521386-5521405 None:intergenic 30.0%
AAAGGCTTGAATCAAAGTAA+GGG + chr7_4:5521785-5521804 None:intergenic 30.0%
! CATAGGATCTTGTTTACATT+TGG + chr7_4:5521984-5522003 None:intergenic 30.0%
CAAATGTAAACAAGATCCTA+TGG - chr7_4:5521982-5522001 Msa1136760:CDS 30.0%
ATTACTACTACAACTAAACG+TGG - chr7_4:5522023-5522042 Msa1136760:CDS 30.0%
! AGTTTGTAAAGAGTATGAAG+AGG + chr7_4:5522066-5522085 None:intergenic 30.0%
TCTTCATACTCTTTACAAAC+TGG - chr7_4:5522065-5522084 Msa1136760:CDS 30.0%
ATACTCTTTACAAACTGGTA+AGG - chr7_4:5522070-5522089 Msa1136760:CDS 30.0%
AGATCCAATTATAACTTCCA+GGG + chr7_4:5522132-5522151 None:intergenic 30.0%
TAGATCCAATTATAACTTCC+AGG + chr7_4:5522133-5522152 None:intergenic 30.0%
CTATAACATCAAGATTCCTA+AGG + chr7_4:5522193-5522212 None:intergenic 30.0%
AGGAATCTTGATGTTATAGA+TGG - chr7_4:5522194-5522213 Msa1136760:CDS 30.0%
TTAATCAAACCTATGGCATA+AGG + chr7_4:5522230-5522249 None:intergenic 30.0%
!!! TTAGTTTTTTGGAGTCCAAA+TGG - chr7_4:5522255-5522274 Msa1136760:CDS 30.0%
!!! TAGTTTTTTGGAGTCCAAAT+GGG - chr7_4:5522256-5522275 Msa1136760:CDS 30.0%
! TCATCTGAAATTTCATGACT+TGG + chr7_4:5522314-5522333 None:intergenic 30.0%
AAGTCATGAAATTTCAGATG+AGG - chr7_4:5522313-5522332 Msa1136760:CDS 30.0%
CTATTTGACAATTCATGTTG+AGG + chr7_4:5522374-5522393 None:intergenic 30.0%
! TAGTTTGTGAAGGTAAGAAT+TGG - chr7_4:5522402-5522421 Msa1136760:CDS 30.0%
AGTTTGTGAAGGTAAGAATT+GGG - chr7_4:5522403-5522422 Msa1136760:CDS 30.0%
ATAGATTGTTTCCGAATGTT+CGG - chr7_4:5522438-5522457 Msa1136760:CDS 30.0%
AAATGGAAGAAACTCAAAGT+AGG + chr7_4:5522642-5522661 None:intergenic 30.0%
TCATTCTCATTCATCTCAAA+TGG + chr7_4:5522659-5522678 None:intergenic 30.0%
! ATTTGTATCGATAAAATCCG+CGG + chr7_4:5522763-5522782 None:intergenic 30.0%
! CGGATTTTATCGATACAAAT+TGG - chr7_4:5522763-5522782 Msa1136760:intron 30.0%
CTCATAACAAATTCAACTTG+AGG + chr7_4:5522827-5522846 None:intergenic 30.0%
ATAAATACCTTCAACTGCTT+TGG + chr7_4:5522995-5523014 None:intergenic 30.0%
!! GAAGGTATTTATAGAAGTAG+AGG - chr7_4:5523003-5523022 Msa1136760:intron 30.0%
AGTCTAATAACTTGAAGGAA+TGG - chr7_4:5523038-5523057 Msa1136760:CDS 30.0%
GTCTAATAACTTGAAGGAAT+GGG - chr7_4:5523039-5523058 Msa1136760:CDS 30.0%
AGAGAGAAAAAGGTCATATA+AGG - chr7_4:5523125-5523144 Msa1136760:CDS 30.0%
ATGATAATTATCCTAAGGCA+AGG - chr7_4:5523154-5523173 Msa1136760:CDS 30.0%
TTTCGATCAGTTATCAGATT+TGG - chr7_4:5523180-5523199 Msa1136760:CDS 30.0%
!!! TCAGATTTGGCTTTTAAGAA+TGG - chr7_4:5523193-5523212 Msa1136760:CDS 30.0%
ATAAGCCACCAAAGATTATA+AGG - chr7_4:5523233-5523252 Msa1136760:CDS 30.0%
TGATTCCTTATAATCTTTGG+TGG + chr7_4:5523241-5523260 None:intergenic 30.0%
TAACAGAACCATTATGTTGA+AGG + chr7_4:5521291-5521310 None:intergenic 30.0%
TAATCATCATAGGAAGACAA+AGG + chr7_4:5521376-5521395 None:intergenic 30.0%
AAAGTCAACGTAATCATCAT+AGG + chr7_4:5521386-5521405 None:intergenic 30.0%
AAAGGCTTGAATCAAAGTAA+GGG + chr7_4:5521785-5521804 None:intergenic 30.0%
! CATAGGATCTTGTTTACATT+TGG + chr7_4:5521984-5522003 None:intergenic 30.0%
CAAATGTAAACAAGATCCTA+TGG - chr7_4:5521982-5522001 Msa1136760:CDS 30.0%
ATTACTACTACAACTAAACG+TGG - chr7_4:5522023-5522042 Msa1136760:CDS 30.0%
! AGTTTGTAAAGAGTATGAAG+AGG + chr7_4:5522066-5522085 None:intergenic 30.0%
TCTTCATACTCTTTACAAAC+TGG - chr7_4:5522065-5522084 Msa1136760:CDS 30.0%
ATACTCTTTACAAACTGGTA+AGG - chr7_4:5522070-5522089 Msa1136760:CDS 30.0%
AGATCCAATTATAACTTCCA+GGG + chr7_4:5522132-5522151 None:intergenic 30.0%
TAGATCCAATTATAACTTCC+AGG + chr7_4:5522133-5522152 None:intergenic 30.0%
CTATAACATCAAGATTCCTA+AGG + chr7_4:5522193-5522212 None:intergenic 30.0%
AGGAATCTTGATGTTATAGA+TGG - chr7_4:5522194-5522213 Msa1136760:CDS 30.0%
TTAATCAAACCTATGGCATA+AGG + chr7_4:5522230-5522249 None:intergenic 30.0%
!!! TTAGTTTTTTGGAGTCCAAA+TGG - chr7_4:5522255-5522274 Msa1136760:CDS 30.0%
!!! TAGTTTTTTGGAGTCCAAAT+GGG - chr7_4:5522256-5522275 Msa1136760:CDS 30.0%
! TCATCTGAAATTTCATGACT+TGG + chr7_4:5522314-5522333 None:intergenic 30.0%
AAGTCATGAAATTTCAGATG+AGG - chr7_4:5522313-5522332 Msa1136760:CDS 30.0%
CTATTTGACAATTCATGTTG+AGG + chr7_4:5522374-5522393 None:intergenic 30.0%
! TAGTTTGTGAAGGTAAGAAT+TGG - chr7_4:5522402-5522421 Msa1136760:CDS 30.0%
AGTTTGTGAAGGTAAGAATT+GGG - chr7_4:5522403-5522422 Msa1136760:CDS 30.0%
ATAGATTGTTTCCGAATGTT+CGG - chr7_4:5522438-5522457 Msa1136760:CDS 30.0%
AAATGGAAGAAACTCAAAGT+AGG + chr7_4:5522642-5522661 None:intergenic 30.0%
TCATTCTCATTCATCTCAAA+TGG + chr7_4:5522659-5522678 None:intergenic 30.0%
! ATTTGTATCGATAAAATCCG+CGG + chr7_4:5522763-5522782 None:intergenic 30.0%
! CGGATTTTATCGATACAAAT+TGG - chr7_4:5522763-5522782 Msa1136760:intron 30.0%
CTCATAACAAATTCAACTTG+AGG + chr7_4:5522827-5522846 None:intergenic 30.0%
ATAAATACCTTCAACTGCTT+TGG + chr7_4:5522995-5523014 None:intergenic 30.0%
!! GAAGGTATTTATAGAAGTAG+AGG - chr7_4:5523003-5523022 Msa1136760:intron 30.0%
AGTCTAATAACTTGAAGGAA+TGG - chr7_4:5523038-5523057 Msa1136760:CDS 30.0%
GTCTAATAACTTGAAGGAAT+GGG - chr7_4:5523039-5523058 Msa1136760:CDS 30.0%
AGAGAGAAAAAGGTCATATA+AGG - chr7_4:5523125-5523144 Msa1136760:CDS 30.0%
ATGATAATTATCCTAAGGCA+AGG - chr7_4:5523154-5523173 Msa1136760:CDS 30.0%
TTTCGATCAGTTATCAGATT+TGG - chr7_4:5523180-5523199 Msa1136760:CDS 30.0%
!!! TCAGATTTGGCTTTTAAGAA+TGG - chr7_4:5523193-5523212 Msa1136760:CDS 30.0%
ATAAGCCACCAAAGATTATA+AGG - chr7_4:5523233-5523252 Msa1136760:CDS 30.0%
TGATTCCTTATAATCTTTGG+TGG + chr7_4:5523241-5523260 None:intergenic 30.0%
! CTTTTTCTAGGCTCTGTTAT+AGG - chr7_4:5521518-5521537 Msa1136760:CDS 35.0%
! TTTTCAATGCAAAGGTGATG+AGG + chr7_4:5521595-5521614 None:intergenic 35.0%
TTACTCTGATGTGATTGTGA+TGG - chr7_4:5521680-5521699 Msa1136760:CDS 35.0%
! TCAAAGTAAGGGATCAGTTT+TGG + chr7_4:5521774-5521793 None:intergenic 35.0%
GAAAGGCTTGAATCAAAGTA+AGG + chr7_4:5521786-5521805 None:intergenic 35.0%
! ATCTTGTTTACATTTGGCCT+TGG + chr7_4:5521978-5521997 None:intergenic 35.0%
TACAACTAAACGTGGCTTAA+AGG - chr7_4:5522031-5522050 Msa1136760:CDS 35.0%
TAAACGTGGCTTAAAGGTTA+TGG - chr7_4:5522037-5522056 Msa1136760:CDS 35.0%
GATCCAATTATAACTTCCAG+GGG + chr7_4:5522131-5522150 None:intergenic 35.0%
ATTAGTACTCCTTATGCCAT+AGG - chr7_4:5522218-5522237 Msa1136760:CDS 35.0%
CTATGTGTAGATCTTGATTG+TGG - chr7_4:5522284-5522303 Msa1136760:CDS 35.0%
GAAGCTGTAATCAACACTAT+TGG - chr7_4:5522344-5522363 Msa1136760:CDS 35.0%
GTTTGTGAAGGTAAGAATTG+GGG - chr7_4:5522404-5522423 Msa1136760:CDS 35.0%
CACTTGATAAACCGAACATT+CGG + chr7_4:5522452-5522471 None:intergenic 35.0%
TTTATCAAGTGCGTTACAAC+AGG - chr7_4:5522461-5522480 Msa1136760:CDS 35.0%
AAGTAATCTCCTCCTACAAT+CGG + chr7_4:5522536-5522555 None:intergenic 35.0%
AACTCAAAGTAGGCAAAAGT+AGG + chr7_4:5522632-5522651 None:intergenic 35.0%
TGAGATGAATGAGAATGATG+AGG - chr7_4:5522661-5522680 Msa1136760:intron 35.0%
AATTTCCATCTTGCACTAAG+AGG - chr7_4:5522905-5522924 Msa1136760:intron 35.0%
TGTTGAGTTTGCAAGTTTCT+TGG - chr7_4:5522955-5522974 Msa1136760:intron 35.0%
AGAGGAGTCTAATAACTTGA+AGG - chr7_4:5523033-5523052 Msa1136760:intron 35.0%
TGTATTTCCTCTCTTGAGAA+TGG - chr7_4:5523079-5523098 Msa1136760:CDS 35.0%
TCATGAAGTTGTCAAGTTCT+TGG - chr7_4:5523258-5523277 Msa1136760:CDS 35.0%
! CTTTTTCTAGGCTCTGTTAT+AGG - chr7_4:5521518-5521537 Msa1136760:CDS 35.0%
! TTTTCAATGCAAAGGTGATG+AGG + chr7_4:5521595-5521614 None:intergenic 35.0%
TTACTCTGATGTGATTGTGA+TGG - chr7_4:5521680-5521699 Msa1136760:CDS 35.0%
! TCAAAGTAAGGGATCAGTTT+TGG + chr7_4:5521774-5521793 None:intergenic 35.0%
GAAAGGCTTGAATCAAAGTA+AGG + chr7_4:5521786-5521805 None:intergenic 35.0%
! ATCTTGTTTACATTTGGCCT+TGG + chr7_4:5521978-5521997 None:intergenic 35.0%
TACAACTAAACGTGGCTTAA+AGG - chr7_4:5522031-5522050 Msa1136760:CDS 35.0%
TAAACGTGGCTTAAAGGTTA+TGG - chr7_4:5522037-5522056 Msa1136760:CDS 35.0%
GATCCAATTATAACTTCCAG+GGG + chr7_4:5522131-5522150 None:intergenic 35.0%
ATTAGTACTCCTTATGCCAT+AGG - chr7_4:5522218-5522237 Msa1136760:CDS 35.0%
CTATGTGTAGATCTTGATTG+TGG - chr7_4:5522284-5522303 Msa1136760:CDS 35.0%
GAAGCTGTAATCAACACTAT+TGG - chr7_4:5522344-5522363 Msa1136760:CDS 35.0%
GTTTGTGAAGGTAAGAATTG+GGG - chr7_4:5522404-5522423 Msa1136760:CDS 35.0%
CACTTGATAAACCGAACATT+CGG + chr7_4:5522452-5522471 None:intergenic 35.0%
TTTATCAAGTGCGTTACAAC+AGG - chr7_4:5522461-5522480 Msa1136760:CDS 35.0%
AAGTAATCTCCTCCTACAAT+CGG + chr7_4:5522536-5522555 None:intergenic 35.0%
AACTCAAAGTAGGCAAAAGT+AGG + chr7_4:5522632-5522651 None:intergenic 35.0%
TGAGATGAATGAGAATGATG+AGG - chr7_4:5522661-5522680 Msa1136760:intron 35.0%
AATTTCCATCTTGCACTAAG+AGG - chr7_4:5522905-5522924 Msa1136760:intron 35.0%
TGTTGAGTTTGCAAGTTTCT+TGG - chr7_4:5522955-5522974 Msa1136760:intron 35.0%
AGAGGAGTCTAATAACTTGA+AGG - chr7_4:5523033-5523052 Msa1136760:intron 35.0%
TGTATTTCCTCTCTTGAGAA+TGG - chr7_4:5523079-5523098 Msa1136760:CDS 35.0%
TCATGAAGTTGTCAAGTTCT+TGG - chr7_4:5523258-5523277 Msa1136760:CDS 35.0%
GAAGCTAGAAGAGTTGACAA+TGG - chr7_4:5521228-5521247 Msa1136760:CDS 40.0%
CGCTCAATCCTTCAACATAA+TGG - chr7_4:5521280-5521299 Msa1136760:CDS 40.0%
ACAAGACTTGTGAAAGAAGC+AGG + chr7_4:5521352-5521371 None:intergenic 40.0%
!! CGTTGACTTTATCCATCAGA+TGG - chr7_4:5521396-5521415 Msa1136760:CDS 40.0%
TTTATCCATCAGATGGCTGA+TGG - chr7_4:5521403-5521422 Msa1136760:CDS 40.0%
CTATAGAAGAAGCAGAGAAG+AGG + chr7_4:5521463-5521482 None:intergenic 40.0%
CTCTTCTCTGCTTCTTCTAT+AGG - chr7_4:5521461-5521480 Msa1136760:CDS 40.0%
!!! GATCAGTTTTGGTTTCATGG+AGG + chr7_4:5521763-5521782 None:intergenic 40.0%
!!! AGGGATCAGTTTTGGTTTCA+TGG + chr7_4:5521766-5521785 None:intergenic 40.0%
! ATTTGAAACCTCCATGATGC+AGG - chr7_4:5521943-5521962 Msa1136760:CDS 40.0%
!! TTGTTTACATTTGGCCTTGG+AGG + chr7_4:5521975-5521994 None:intergenic 40.0%
! AACGTTGCAAGTTGTTGTTG+AGG + chr7_4:5522101-5522120 None:intergenic 40.0%
AGTCCCCTGGAAGTTATAAT+TGG - chr7_4:5522125-5522144 Msa1136760:CDS 40.0%
GCTGTAATCAACACTATTGG+TGG - chr7_4:5522347-5522366 Msa1136760:CDS 40.0%
! TTTGCTTCTGAGTGTTGTGT+AGG - chr7_4:5522554-5522573 Msa1136760:intron 40.0%
GAGAATGATGAGGATGTTGT+TGG - chr7_4:5522671-5522690 Msa1136760:CDS 40.0%
GGTTGGAAAGATGTATGAAG+TGG - chr7_4:5522724-5522743 Msa1136760:CDS 40.0%
GGCGATATAGTTAGAGTTGT+TGG - chr7_4:5522785-5522804 Msa1136760:intron 40.0%
CAACTTGAGGTGATGAATTG+TGG + chr7_4:5522814-5522833 None:intergenic 40.0%
AGAATCTCAGCTGAAGACTT+AGG + chr7_4:5522854-5522873 None:intergenic 40.0%
GTTTGCAAGTTTCTTGGATC+AGG - chr7_4:5522961-5522980 Msa1136760:intron 40.0%
AGAAGTAGAGGAAGTTCAAG+AGG - chr7_4:5523015-5523034 Msa1136760:intron 40.0%
TCCTCTCTTGAGAATGGTTT+AGG - chr7_4:5523085-5523104 Msa1136760:CDS 40.0%
TCCTAAACCATTCTCAAGAG+AGG + chr7_4:5523089-5523108 None:intergenic 40.0%
!! TGGTTTAGGAGCATTGTACA+AGG - chr7_4:5523099-5523118 Msa1136760:CDS 40.0%
TACAAGGTGCAGAGAGAAAA+AGG - chr7_4:5523115-5523134 Msa1136760:CDS 40.0%
GAAGCTAGAAGAGTTGACAA+TGG - chr7_4:5521228-5521247 Msa1136760:CDS 40.0%
CGCTCAATCCTTCAACATAA+TGG - chr7_4:5521280-5521299 Msa1136760:CDS 40.0%
ACAAGACTTGTGAAAGAAGC+AGG + chr7_4:5521352-5521371 None:intergenic 40.0%
!! CGTTGACTTTATCCATCAGA+TGG - chr7_4:5521396-5521415 Msa1136760:CDS 40.0%
TTTATCCATCAGATGGCTGA+TGG - chr7_4:5521403-5521422 Msa1136760:CDS 40.0%
CTATAGAAGAAGCAGAGAAG+AGG + chr7_4:5521463-5521482 None:intergenic 40.0%
CTCTTCTCTGCTTCTTCTAT+AGG - chr7_4:5521461-5521480 Msa1136760:CDS 40.0%
!!! GATCAGTTTTGGTTTCATGG+AGG + chr7_4:5521763-5521782 None:intergenic 40.0%
!!! AGGGATCAGTTTTGGTTTCA+TGG + chr7_4:5521766-5521785 None:intergenic 40.0%
! ATTTGAAACCTCCATGATGC+AGG - chr7_4:5521943-5521962 Msa1136760:CDS 40.0%
!! TTGTTTACATTTGGCCTTGG+AGG + chr7_4:5521975-5521994 None:intergenic 40.0%
! AACGTTGCAAGTTGTTGTTG+AGG + chr7_4:5522101-5522120 None:intergenic 40.0%
AGTCCCCTGGAAGTTATAAT+TGG - chr7_4:5522125-5522144 Msa1136760:CDS 40.0%
GCTGTAATCAACACTATTGG+TGG - chr7_4:5522347-5522366 Msa1136760:CDS 40.0%
! TTTGCTTCTGAGTGTTGTGT+AGG - chr7_4:5522554-5522573 Msa1136760:intron 40.0%
GAGAATGATGAGGATGTTGT+TGG - chr7_4:5522671-5522690 Msa1136760:CDS 40.0%
GGTTGGAAAGATGTATGAAG+TGG - chr7_4:5522724-5522743 Msa1136760:CDS 40.0%
GGCGATATAGTTAGAGTTGT+TGG - chr7_4:5522785-5522804 Msa1136760:intron 40.0%
CAACTTGAGGTGATGAATTG+TGG + chr7_4:5522814-5522833 None:intergenic 40.0%
AGAATCTCAGCTGAAGACTT+AGG + chr7_4:5522854-5522873 None:intergenic 40.0%
GTTTGCAAGTTTCTTGGATC+AGG - chr7_4:5522961-5522980 Msa1136760:intron 40.0%
AGAAGTAGAGGAAGTTCAAG+AGG - chr7_4:5523015-5523034 Msa1136760:intron 40.0%
TCCTCTCTTGAGAATGGTTT+AGG - chr7_4:5523085-5523104 Msa1136760:CDS 40.0%
TCCTAAACCATTCTCAAGAG+AGG + chr7_4:5523089-5523108 None:intergenic 40.0%
!! TGGTTTAGGAGCATTGTACA+AGG - chr7_4:5523099-5523118 Msa1136760:CDS 40.0%
TACAAGGTGCAGAGAGAAAA+AGG - chr7_4:5523115-5523134 Msa1136760:CDS 40.0%
GGATGCAAAACATCACCAGT+TGG - chr7_4:5521249-5521268 Msa1136760:CDS 45.0%
TTGAGCGAAGAGTTTCCAAC+TGG + chr7_4:5521267-5521286 None:intergenic 45.0%
GACTTTGTCTTTCTCAGCTC+AGG - chr7_4:5521732-5521751 Msa1136760:CDS 45.0%
! GAAAGGAGGCAGCTTTTGAA+AGG + chr7_4:5521803-5521822 None:intergenic 45.0%
TCAAAAGCTGCCTCCTTTCT+TGG - chr7_4:5521804-5521823 Msa1136760:CDS 45.0%
GCTGTATCGCTGTTCTTCAA+AGG - chr7_4:5521835-5521854 Msa1136760:CDS 45.0%
TGTCAGCGTAGAGAAACCAT+AGG + chr7_4:5522001-5522020 None:intergenic 45.0%
ATGTATTGCCACCTTCTCTG+TGG - chr7_4:5522167-5522186 Msa1136760:CDS 45.0%
TACACATAGCTGCTCCCATT+TGG + chr7_4:5522273-5522292 None:intergenic 45.0%
TGTGAAGGTAAGAATTGGGG+TGG - chr7_4:5522407-5522426 Msa1136760:CDS 45.0%
TCCTACAATCGGTACATCTC+CGG + chr7_4:5522525-5522544 None:intergenic 45.0%
TAGTACGAACCGTGTTGTCT+CGG + chr7_4:5522606-5522625 None:intergenic 45.0%
! TGTTGTTGGTGAGCAAACAG+TGG - chr7_4:5522685-5522704 Msa1136760:CDS 45.0%
GAGCAAACAGTGGATCTTTG+CGG - chr7_4:5522695-5522714 Msa1136760:CDS 45.0%
GTGGTTGTTACTACTTACCG+CGG - chr7_4:5522743-5522762 Msa1136760:CDS 45.0%
TAGCACCTCTTAGTGCAAGA+TGG + chr7_4:5522913-5522932 None:intergenic 45.0%
!! TCTTGCACTAAGAGGTGCTA+CGG - chr7_4:5522913-5522932 Msa1136760:intron 45.0%
ACCTTCAACTGCTTTGGCAT+CGG + chr7_4:5522989-5523008 None:intergenic 45.0%
! GGTGGCTTATATTGACTAGC+TGG + chr7_4:5523223-5523242 None:intergenic 45.0%
GGATGCAAAACATCACCAGT+TGG - chr7_4:5521249-5521268 Msa1136760:CDS 45.0%
TTGAGCGAAGAGTTTCCAAC+TGG + chr7_4:5521267-5521286 None:intergenic 45.0%
GACTTTGTCTTTCTCAGCTC+AGG - chr7_4:5521732-5521751 Msa1136760:CDS 45.0%
! GAAAGGAGGCAGCTTTTGAA+AGG + chr7_4:5521803-5521822 None:intergenic 45.0%
TCAAAAGCTGCCTCCTTTCT+TGG - chr7_4:5521804-5521823 Msa1136760:CDS 45.0%
GCTGTATCGCTGTTCTTCAA+AGG - chr7_4:5521835-5521854 Msa1136760:CDS 45.0%
TGTCAGCGTAGAGAAACCAT+AGG + chr7_4:5522001-5522020 None:intergenic 45.0%
ATGTATTGCCACCTTCTCTG+TGG - chr7_4:5522167-5522186 Msa1136760:CDS 45.0%
TACACATAGCTGCTCCCATT+TGG + chr7_4:5522273-5522292 None:intergenic 45.0%
TGTGAAGGTAAGAATTGGGG+TGG - chr7_4:5522407-5522426 Msa1136760:CDS 45.0%
TCCTACAATCGGTACATCTC+CGG + chr7_4:5522525-5522544 None:intergenic 45.0%
TAGTACGAACCGTGTTGTCT+CGG + chr7_4:5522606-5522625 None:intergenic 45.0%
! TGTTGTTGGTGAGCAAACAG+TGG - chr7_4:5522685-5522704 Msa1136760:CDS 45.0%
GAGCAAACAGTGGATCTTTG+CGG - chr7_4:5522695-5522714 Msa1136760:CDS 45.0%
GTGGTTGTTACTACTTACCG+CGG - chr7_4:5522743-5522762 Msa1136760:CDS 45.0%
TAGCACCTCTTAGTGCAAGA+TGG + chr7_4:5522913-5522932 None:intergenic 45.0%
!! TCTTGCACTAAGAGGTGCTA+CGG - chr7_4:5522913-5522932 Msa1136760:intron 45.0%
ACCTTCAACTGCTTTGGCAT+CGG + chr7_4:5522989-5523008 None:intergenic 45.0%
! GGTGGCTTATATTGACTAGC+TGG + chr7_4:5523223-5523242 None:intergenic 45.0%
GTTCTCCATCAGCCATCTGA+TGG + chr7_4:5521411-5521430 None:intergenic 50.0%
GAAGAACAGCGATACAGCCT+CGG + chr7_4:5521833-5521852 None:intergenic 50.0%
GGAAACATCCTGCATCATGG+AGG + chr7_4:5521954-5521973 None:intergenic 50.0%
GGAGGAAACATCCTGCATCA+TGG + chr7_4:5521957-5521976 None:intergenic 50.0%
GATGCAGGATGTTTCCTCCA+AGG - chr7_4:5521958-5521977 Msa1136760:CDS 50.0%
GATTCCTAAGGCCACAGAGA+AGG + chr7_4:5522181-5522200 None:intergenic 50.0%
!! GGAGATGTACCGATTGTAGG+AGG - chr7_4:5522524-5522543 Msa1136760:CDS 50.0%
AGTACGAACCGTGTTGTCTC+GGG + chr7_4:5522605-5522624 None:intergenic 50.0%
!! CTTGCACTAAGAGGTGCTAC+GGG - chr7_4:5522914-5522933 Msa1136760:intron 50.0%
ACCGATGCCAAAGCAGTTGA+AGG - chr7_4:5522985-5523004 Msa1136760:intron 50.0%
GATCGAAAGCTCCTTGCCTT+AGG + chr7_4:5523168-5523187 None:intergenic 50.0%
GTTCTCCATCAGCCATCTGA+TGG + chr7_4:5521411-5521430 None:intergenic 50.0%
GAAGAACAGCGATACAGCCT+CGG + chr7_4:5521833-5521852 None:intergenic 50.0%
GGAAACATCCTGCATCATGG+AGG + chr7_4:5521954-5521973 None:intergenic 50.0%
GGAGGAAACATCCTGCATCA+TGG + chr7_4:5521957-5521976 None:intergenic 50.0%
GATGCAGGATGTTTCCTCCA+AGG - chr7_4:5521958-5521977 Msa1136760:CDS 50.0%
GATTCCTAAGGCCACAGAGA+AGG + chr7_4:5522181-5522200 None:intergenic 50.0%
!! GGAGATGTACCGATTGTAGG+AGG - chr7_4:5522524-5522543 Msa1136760:CDS 50.0%
AGTACGAACCGTGTTGTCTC+GGG + chr7_4:5522605-5522624 None:intergenic 50.0%
!! CTTGCACTAAGAGGTGCTAC+GGG - chr7_4:5522914-5522933 Msa1136760:intron 50.0%
ACCGATGCCAAAGCAGTTGA+AGG - chr7_4:5522985-5523004 Msa1136760:intron 50.0%
GATCGAAAGCTCCTTGCCTT+AGG + chr7_4:5523168-5523187 None:intergenic 50.0%
ACAGCCTCGGTGACCAAGAA+AGG + chr7_4:5521820-5521839 None:intergenic 55.0%
TGCAACGTTCTCTAGTCCCC+TGG - chr7_4:5522112-5522131 Msa1136760:CDS 55.0%
TCCTAAGGCCACAGAGAAGG+TGG + chr7_4:5522178-5522197 None:intergenic 55.0%
!! GCCGGAGATGTACCGATTGT+AGG - chr7_4:5522521-5522540 Msa1136760:CDS 55.0%
CACAACCACCCGAGACAACA+CGG - chr7_4:5522594-5522613 Msa1136760:intron 55.0%
AGTGGATCTTTGCGGCGTTG+AGG - chr7_4:5522703-5522722 Msa1136760:CDS 55.0%
! GATCTTTGCGGCGTTGAGGT+TGG - chr7_4:5522707-5522726 Msa1136760:CDS 55.0%
ACAGCCTCGGTGACCAAGAA+AGG + chr7_4:5521820-5521839 None:intergenic 55.0%
TGCAACGTTCTCTAGTCCCC+TGG - chr7_4:5522112-5522131 Msa1136760:CDS 55.0%
TCCTAAGGCCACAGAGAAGG+TGG + chr7_4:5522178-5522197 None:intergenic 55.0%
!! GCCGGAGATGTACCGATTGT+AGG - chr7_4:5522521-5522540 Msa1136760:CDS 55.0%
CACAACCACCCGAGACAACA+CGG - chr7_4:5522594-5522613 Msa1136760:intron 55.0%
AGTGGATCTTTGCGGCGTTG+AGG - chr7_4:5522703-5522722 Msa1136760:CDS 55.0%
! GATCTTTGCGGCGTTGAGGT+TGG - chr7_4:5522707-5522726 Msa1136760:CDS 55.0%
GCCTCCTTTCTTGGTCACCG+AGG - chr7_4:5521813-5521832 Msa1136760:CDS 60.0%
GCCTCGGTGACCAAGAAAGG+AGG + chr7_4:5521817-5521836 None:intergenic 60.0%
GCCACCTTCTCTGTGGCCTT+AGG - chr7_4:5522174-5522193 Msa1136760:CDS 60.0%
ACGAACCGTGTTGTCTCGGG+TGG + chr7_4:5522602-5522621 None:intergenic 60.0%
GCCTCCTTTCTTGGTCACCG+AGG - chr7_4:5521813-5521832 Msa1136760:CDS 60.0%
GCCTCGGTGACCAAGAAAGG+AGG + chr7_4:5521817-5521836 None:intergenic 60.0%
GCCACCTTCTCTGTGGCCTT+AGG - chr7_4:5522174-5522193 Msa1136760:CDS 60.0%
ACGAACCGTGTTGTCTCGGG+TGG + chr7_4:5522602-5522621 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 5521202 5523318 5521202 ID=Msa1136760;Name=Msa1136760
chr7_4 mRNA 5521202 5523318 5521202 ID=Msa1136760-mRNA-1;Parent=Msa1136760;Name=Msa1136760-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|580
chr7_4 exon 5523038 5523318 5523038 ID=Msa1136760-mRNA-1:exon:1446;Parent=Msa1136760-mRNA-1
chr7_4 exon 5522664 5522771 5522664 ID=Msa1136760-mRNA-1:exon:1445;Parent=Msa1136760-mRNA-1
chr7_4 exon 5521202 5522555 5521202 ID=Msa1136760-mRNA-1:exon:1444;Parent=Msa1136760-mRNA-1
chr7_4 CDS 5523038 5523318 5523038 ID=Msa1136760-mRNA-1:cds;Parent=Msa1136760-mRNA-1
chr7_4 CDS 5522664 5522771 5522664 ID=Msa1136760-mRNA-1:cds;Parent=Msa1136760-mRNA-1
chr7_4 CDS 5521202 5522555 5521202 ID=Msa1136760-mRNA-1:cds;Parent=Msa1136760-mRNA-1
Gene Sequence

>Msa1136760

ATGATGACAGATGATGAACTTATACAGAAGCTAGAAGAGTTGACAATGGATGCAAAACATCACCAGTTGGAAACTCTTCGCTCAATCCTTCAACATAATGGTTCTGTTAGATATCTTCAATCCTTCAACAATAACAAAAGTGTTGATCCTGCTTCTTTCACAAGTCTTGTTCCTTTGTCTTCCTATGATGATTACGTTGACTTTATCCATCAGATGGCTGATGGAGAACATGATCATCATGATCTTCTTTCTGTTGATCCTCTTCTCTGCTTCTTCTATAGCTCAGGAACAACCTCCATGAAACCAAAACTGATCCCTTACTTTGATTCAAGCCTTTCAAAAGCTGCCTCCTTTCTTGGTCACCGAGGCTGTATCGCTGTTCTTCAAAGGATGTTTCCTCCAAGGCCAAATGTAAACAAGATCCTATGGTTTCTCTACGCTGACAAAATTACTACTACAACTAAACGTGGCTTAAAGGTTATGGCAGCCTCTTCATACTCTTTACAAACTGGTAAGGTAACTCCTCAACAACAACTTGCAACGTTCTCTAGTCCCCTGGAAGTTATAATTGGATCTAATGTGGAACAACAAATGTATTGCCACCTTCTCTGTGGCCTTAGGAATCTTGATGTTATAGATGGAATTAGTACTCCTTATGCCATAGGTTTGATTAAAGCATTTAGTTTTTTGGAGTCCAAATGGGAGCAGCTATGTGTAGATCTTGATTGTGGATTTCCAAGTCATGAAATTTCAGATGAGGAAATGAGAGAAGCTGTAATCAACACTATTGGTGGTCCTCAACATGAATTGTCAAATAGAATAAGATTAGTTTGTGAAGGTAAGAATTGGGGTGGAATTGTACATAGATTGTTTCCGAATGTTCGGTTTATCAAGTGCGTTACAACAGGAAGCATGAAGCAGTACTATCAAAAACTTAAGTTTTATGCCGGAGATGTACCGATTGTAGGAGGAGATTACTTTGCTTCTGAGTGTTGTGTAGGTTTAAATTTAGACATAACACAACCACCCGAGACAACACGGTTCGTACTACTTCCTACTTTTGCCTACTTTGAGTTTCTTCCATTTGAGATGAATGAGAATGATGAGGATGTTGTTGGTGAGCAAACAGTGGATCTTTGCGGCGTTGAGGTTGGAAAGATGTATGAAGTGGTTGTTACTACTTACCGCGGATTTTATCGATACAAATTGGGCGATATAGTTAGAGTTGTTGGTTTCCACAATTCATCACCTCAAGTTGAATTTGTTATGAGAGCACCTAAGTCTTCAGCTGAGATTCTCAATGAGAAAGACTTGATTTCAGCAGTTGAAAATTTCCATCTTGCACTAAGAGGTGCTACGGGAATCAATTCAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGATCAGGAACCGATGCCAAAGCAGTTGAAGGTATTTATAGAAGTAGAGGAAGTTCAAGAGGAGTCTAATAACTTGAAGGAATGGGTTAAAGTGTTTAAAAGTTGTATTTCCTCTCTTGAGAATGGTTTAGGAGCATTGTACAAGGTGCAGAGAGAAAAAGGTCATATAAGGAACTTAATGATAATTATCCTAAGGCAAGGAGCTTTCGATCAGTTATCAGATTTGGCTTTTAAGAATGGAACACCAGCTAGTCAATATAAGCCACCAAAGATTATAAGGAATCATGAAGTTGTCAAGTTCTTGGAAAAGTTTTCTTTTGTTAGAGTATCAATGGATGACTAA

Protein sequence

>Msa1136760

MMTDDELIQKLEELTMDAKHHQLETLRSILQHNGSVRYLQSFNNNKSVDPASFTSLVPLSSYDDYVDFIHQMADGEHDHHDLLSVDPLLCFFYSSGTTSMKPKLIPYFDSSLSKAASFLGHRGCIAVLQRMFPPRPNVNKILWFLYADKITTTTKRGLKVMAASSYSLQTGKVTPQQQLATFSSPLEVIIGSNVEQQMYCHLLCGLRNLDVIDGISTPYAIGLIKAFSFLESKWEQLCVDLDCGFPSHEISDEEMREAVINTIGGPQHELSNRIRLVCEGKNWGGIVHRLFPNVRFIKCVTTGSMKQYYQKLKFYAGDVPIVGGDYFASECCVGLNLDITQPPETTRFVLLPTFAYFEFLPFEMNENDEDVVGEQTVDLCGVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFHNSSPQVEFVMRAPKSSAEILNEKDLISAVENFHLALRGATGINSIEIVEFASFLDQEPMPKQLKVFIEVEEVQEESNNLKEWVKVFKSCISSLENGLGALYKVQREKGHIRNLMIIILRQGAFDQLSDLAFKNGTPASQYKPPKIIRNHEVVKFLEKFSFVRVSMDD*