AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0211440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0211440 MtrunA17_Chr4g0045441 70.655 351 102 1 1 350 1 351 0.0 528
Msa0211440 MtrunA17_Chr4g0045431 68.661 351 109 1 1 350 1 351 0.0 510
Msa0211440 MtrunA17_Chr4g0045471 67.521 351 112 2 1 349 1 351 1.14e-178 499
Msa0211440 MtrunA17_Chr4g0045451 67.143 350 114 1 1 349 1 350 4.87e-178 497
Msa0211440 MtrunA17_Chr4g0045461 66.667 348 114 2 1 347 1 347 3.29e-161 455
Msa0211440 MtrunA17_Chr1g0162321 56.534 352 150 1 1 349 44 395 8.16e-148 422
Msa0211440 MtrunA17_Chr1g0162351 55.966 352 152 1 1 349 44 395 1.54e-147 422
Msa0211440 MtrunA17_Chr4g0045411 54.213 356 151 3 1 350 1 350 1.74e-133 384
Msa0211440 MtrunA17_Chr1g0162361 52.707 351 157 2 1 350 1 343 2.88e-129 373
Msa0211440 MtrunA17_Chr8g0375601 33.333 333 197 7 1 326 19 333 4.11e-57 189
Msa0211440 MtrunA17_Chr4g0006371 37.582 306 168 10 26 325 62 350 5.27e-57 189
Msa0211440 MtrunA17_Chr7g0242551 32.938 337 197 8 1 325 23 342 8.10e-55 183
Msa0211440 MtrunA17_Chr8g0375571 31.742 356 214 9 1 350 19 351 8.11e-54 181
Msa0211440 MtrunA17_Chr8g0375671 32.722 327 195 8 1 321 26 333 1.32e-53 180
Msa0211440 MtrunA17_Chr1g0191201 34.639 332 199 7 4 331 33 350 3.91e-53 179
Msa0211440 MtrunA17_Chr5g0437181 33.956 321 188 11 4 317 25 328 9.56e-52 175
Msa0211440 MtrunA17_Chr8g0345831 34.545 330 190 7 1 325 15 323 1.01e-51 175
Msa0211440 MtrunA17_Chr3g0113641 35.016 317 182 10 8 317 30 329 6.01e-51 173
Msa0211440 MtrunA17_Chr3g0128001 32.716 324 189 8 7 325 18 317 7.34e-51 172
Msa0211440 MtrunA17_Chr7g0239111 33.435 329 193 9 3 326 30 337 1.74e-50 172
Msa0211440 MtrunA17_Chr8g0351101 33.951 324 194 7 4 322 33 341 4.57e-50 171
Msa0211440 MtrunA17_Chr2g0296371 31.231 333 207 6 4 330 28 344 9.18e-49 167
Msa0211440 MtrunA17_Chr3g0109041 30.746 335 204 9 1 326 18 333 9.95e-49 167
Msa0211440 MtrunA17_Chr7g0239821 32.174 345 187 9 3 330 39 353 1.45e-48 167
Msa0211440 MtrunA17_Chr5g0421011 31.707 328 199 9 3 326 23 329 3.53e-48 166
Msa0211440 MtrunA17_Chr1g0184151 32.335 334 196 9 4 329 15 326 3.84e-48 165
Msa0211440 MtrunA17_Chr5g0412651 31.498 327 199 9 7 326 18 326 5.08e-48 165
Msa0211440 MtrunA17_Chr1g0184121 32.670 352 203 11 4 348 14 338 1.24e-47 164
Msa0211440 MtrunA17_Chr5g0412671 31.832 333 188 9 8 326 19 326 5.96e-47 162
Msa0211440 MtrunA17_Chr7g0239101 31.562 320 195 7 10 326 39 337 1.20e-46 162
Msa0211440 MtrunA17_Chr8g0336781 30.769 351 201 9 10 349 81 400 1.22e-46 163
Msa0211440 MtrunA17_Chr6g0474391 31.988 322 196 8 8 322 47 352 1.65e-46 162
Msa0211440 MtrunA17_Chr1g0204181 31.595 326 204 7 6 326 40 351 2.57e-46 161
Msa0211440 MtrunA17_Chr8g0336851 30.514 331 197 8 26 349 60 364 5.15e-46 160
Msa0211440 MtrunA17_Chr8g0348081 30.747 348 204 11 10 349 46 364 6.63e-46 160
Msa0211440 MtrunA17_Chr6g0455481 32.628 331 185 11 4 324 19 321 1.33e-45 159
Msa0211440 MtrunA17_Chr7g0239121 32.424 330 196 11 3 326 26 334 1.51e-45 159
Msa0211440 MtrunA17_Chr4g0066121 30.484 351 211 9 7 349 41 366 2.12e-45 159
Msa0211440 MtrunA17_Chr1g0184111 31.722 331 196 9 4 327 14 321 2.67e-45 158
Msa0211440 MtrunA17_Chr5g0420951 31.699 306 178 10 19 317 46 327 4.61e-45 157
Msa0211440 MtrunA17_Chr8g0384461 32.372 312 179 7 22 322 43 333 5.00e-45 157
Msa0211440 MtrunA17_Chr8g0336751 34.448 299 168 8 26 318 94 370 6.06e-45 158
Msa0211440 MtrunA17_Chr2g0311831 31.068 309 183 8 26 327 68 353 1.06e-44 157
Msa0211440 MtrunA17_Chr8g0336761 31.014 345 207 9 10 349 46 364 1.07e-44 157
Msa0211440 MtrunA17_Chr3g0126741 32.797 311 171 7 23 320 56 341 1.73e-44 156
Msa0211440 MtrunA17_Chr8g0336631 31.519 349 201 12 10 349 46 365 1.82e-44 156
Msa0211440 MtrunA17_Chr2g0332191 32.722 327 179 10 21 336 47 343 7.64e-44 155
Msa0211440 MtrunA17_Chr2g0314401 32.026 306 186 8 26 328 51 337 7.81e-44 154
Msa0211440 MtrunA17_Chr5g0412681 30.938 320 186 8 12 323 18 310 8.08e-44 154
Msa0211440 MtrunA17_Chr1g0184161 29.940 334 204 9 4 329 15 326 1.31e-43 153
Msa0211440 MtrunA17_Chr8g0336861 30.448 335 194 8 26 349 60 366 1.54e-43 154
Msa0211440 MtrunA17_Chr1g0179801 32.558 301 173 8 26 317 66 345 1.72e-43 154
Msa0211440 MtrunA17_Chr3g0102041 30.065 306 195 6 4 306 16 305 3.32e-43 152
Msa0211440 MtrunA17_Chr5g0405411 29.545 308 192 7 5 306 17 305 4.92e-43 152
Msa0211440 MtrunA17_Chr8g0375681 33.721 258 153 6 63 317 15 257 6.34e-43 150
Msa0211440 MtrunA17_Chr3g0125421 32.036 334 205 8 4 331 16 333 1.12e-42 151
Msa0211440 MtrunA17_Chr3g0130391 31.464 321 201 7 8 323 49 355 1.27e-42 152
Msa0211440 MtrunA17_Chr3g0145171 32.886 298 177 9 26 319 52 330 1.33e-42 151
Msa0211440 MtrunA17_Chr8g0375701 32.753 287 173 7 48 329 71 342 1.40e-42 151
Msa0211440 MtrunA17_Chr7g0265221 28.809 361 212 9 1 338 35 373 1.41e-42 152
Msa0211440 MtrunA17_Chr5g0423191 29.118 340 203 12 3 330 23 336 1.41e-42 151
Msa0211440 MtrunA17_Chr1g0167911 30.548 347 209 8 8 348 35 355 1.66e-42 151
Msa0211440 MtrunA17_Chr5g0398291 30.792 341 203 12 1 326 16 338 2.27e-42 150
Msa0211440 MtrunA17_Chr2g0314391 30.938 320 191 8 26 340 70 364 2.77e-42 150
Msa0211440 MtrunA17_Chr2g0311631 29.464 336 204 7 3 328 32 344 3.37e-42 150
Msa0211440 MtrunA17_Chr2g0314381 32.680 306 184 9 26 328 77 363 3.71e-42 150
Msa0211440 MtrunA17_Chr1g0162191 31.457 302 173 7 26 318 47 323 8.78e-42 149
Msa0211440 MtrunA17_Chr3g0114861 32.743 339 199 9 1 333 14 329 1.08e-41 148
Msa0211440 MtrunA17_Chr1g0167961 32.013 303 178 6 22 318 65 345 2.12e-41 148
Msa0211440 MtrunA17_Chr2g0311701 31.329 316 181 10 26 329 69 360 2.33e-41 148
Msa0211440 MtrunA17_Chr5g0424211 31.677 322 185 11 4 314 18 315 2.41e-41 147
Msa0211440 MtrunA17_Chr2g0311761 31.894 301 174 10 26 318 68 345 2.76e-41 148
Msa0211440 MtrunA17_Chr5g0423201 30.968 310 189 9 21 326 42 330 3.41e-41 147
Msa0211440 MtrunA17_Chr5g0423221 29.697 330 204 12 21 344 66 373 4.09e-41 148
Msa0211440 MtrunA17_Chr5g0420901 28.875 329 195 8 1 318 20 320 5.75e-41 147
Msa0211440 MtrunA17_Chr2g0311681 30.284 317 195 4 25 334 62 359 6.35e-41 147
Msa0211440 MtrunA17_Chr8g0371921 30.645 310 188 9 4 306 16 305 7.20e-41 147
Msa0211440 MtrunA17_Chr8g0371931 29.126 309 194 7 4 306 16 305 8.60e-41 146
Msa0211440 MtrunA17_Chr5g0426891 28.165 316 193 9 20 326 33 323 2.54e-40 145
Msa0211440 MtrunA17_Chr1g0187821 31.034 319 184 9 14 318 47 343 4.10e-40 145
Msa0211440 MtrunA17_Chr2g0285931 31.661 319 174 11 19 322 21 310 4.44e-40 144
Msa0211440 MtrunA17_Chr1g0187811 31.148 305 172 9 26 318 188 466 4.51e-40 147
Msa0211440 MtrunA17_Chr2g0311691 31.230 317 190 6 26 334 63 359 5.49e-40 144
Msa0211440 MtrunA17_Chr5g0423251 27.864 323 202 9 3 318 23 321 5.49e-40 144
Msa0211440 MtrunA17_Chr5g0421041 31.090 312 186 11 26 330 45 334 7.12e-40 144
Msa0211440 MtrunA17_Chr5g0421101 30.743 296 181 7 26 318 47 321 1.33e-39 143
Msa0211440 MtrunA17_Chr1g0184241 28.986 345 211 9 8 347 49 364 1.36e-39 143
Msa0211440 MtrunA17_Chr5g0424201 30.588 340 201 10 4 333 20 334 1.39e-39 142
Msa0211440 MtrunA17_Chr5g0423211 28.319 339 198 11 3 326 23 331 1.92e-39 142
Msa0211440 MtrunA17_Chr5g0421091 27.714 350 213 9 1 338 19 340 2.62e-39 142
Msa0211440 MtrunA17_Chr4g0053251 30.938 320 193 13 26 329 8 315 3.84e-39 141
Msa0211440 MtrunA17_Chr8g0370711 31.879 298 180 9 26 319 52 330 5.56e-39 141
Msa0211440 MtrunA17_Chr5g0420981 29.032 310 190 8 16 317 40 327 6.56e-39 141
Msa0211440 MtrunA17_Chr2g0311921 30.565 301 178 11 26 318 54 331 1.01e-38 141
Msa0211440 MtrunA17_Chr8g0384481 31.402 328 203 9 2 324 36 346 1.20e-38 141
Msa0211440 MtrunA17_Chr1g0167951 30.372 349 208 9 8 349 35 355 1.37e-38 140
Msa0211440 MtrunA17_Chr7g0250511 29.697 330 209 8 1 326 22 332 1.49e-38 140
Msa0211440 MtrunA17_Chr4g0064781 32.673 303 176 10 26 323 50 329 1.71e-38 140
Msa0211440 MtrunA17_Chr8g0354241 28.412 359 222 10 1 349 41 374 3.64e-38 140
Msa0211440 MtrunA17_Chr8g0354261 28.406 345 214 9 13 349 55 374 4.67e-38 139
Msa0211440 MtrunA17_Chr7g0239071 32.727 275 166 7 55 326 24 282 5.28e-38 138
Msa0211440 MtrunA17_Chr2g0311711 29.321 324 195 8 17 329 55 355 6.81e-38 139
Msa0211440 MtrunA17_Chr7g0220011 29.518 332 197 12 4 326 16 319 7.08e-38 138
Msa0211440 MtrunA17_Chr1g0187831 30.897 301 177 8 26 318 70 347 1.21e-37 139
Msa0211440 MtrunA17_Chr8g0365241 28.859 298 185 8 26 318 57 332 1.26e-37 138
Msa0211440 MtrunA17_Chr3g0125201 31.962 316 171 11 25 326 2 287 1.89e-37 136
Msa0211440 MtrunA17_Chr3g0087031 30.868 311 188 9 26 330 60 349 2.08e-37 137
Msa0211440 MtrunA17_Chr3g0105281 28.529 340 184 13 14 341 22 314 3.66e-37 136
Msa0211440 MtrunA17_Chr7g0239091 30.877 285 173 6 54 337 182 443 6.31e-37 138
Msa0211440 MtrunA17_Chr8g0370721 32.215 298 179 10 26 319 52 330 7.04e-37 136
Msa0211440 MtrunA17_Chr1g0194321 30.218 321 186 10 21 325 15 313 1.09e-36 135
Msa0211440 MtrunA17_Chr8g0364471 30.464 302 179 9 26 318 67 346 1.10e-36 135
Msa0211440 MtrunA17_Chr4g0055591 29.904 311 183 9 26 328 61 344 2.66e-36 134
Msa0211440 MtrunA17_Chr1g0184101 28.313 332 204 8 4 326 14 320 4.05e-36 134
Msa0211440 MtrunA17_Chr5g0420941 25.070 355 230 8 1 345 19 347 4.94e-36 134
Msa0211440 MtrunA17_Chr2g0311741 28.333 360 210 12 4 349 2 327 5.94e-36 133
Msa0211440 MtrunA17_Chr2g0289341 29.097 299 179 10 27 319 5 276 6.98e-36 132
Msa0211440 MtrunA17_Chr7g0232161 34.375 256 144 8 26 278 60 294 8.45e-36 132
Msa0211440 MtrunA17_Chr7g0235951 28.065 310 191 7 19 318 59 346 1.37e-35 133
Msa0211440 MtrunA17_Chr7g0220001 29.940 334 203 9 4 331 18 326 1.88e-35 132
Msa0211440 MtrunA17_Chr7g0225881 29.755 326 189 10 8 318 43 343 2.92e-35 132
Msa0211440 MtrunA17_Chr8g0358941 29.355 310 180 11 26 322 27 310 3.29e-35 131
Msa0211440 MtrunA17_Chr5g0394071 39.881 168 93 2 158 325 4 163 4.80e-35 126
Msa0211440 MtrunA17_Chr4g0037611 41.615 161 85 3 166 325 1 153 6.85e-35 126
Msa0211440 MtrunA17_Chr5g0439011 29.643 280 173 5 45 320 19 278 1.92e-34 129
Msa0211440 MtrunA17_Chr2g0319491 28.526 312 190 7 17 325 24 305 5.86e-34 127
Msa0211440 MtrunA17_Chr7g0266651 31.193 327 185 9 8 321 39 338 6.30e-34 128
Msa0211440 MtrunA17_Chr1g0167931 29.524 315 160 8 8 318 35 291 6.65e-34 127
Msa0211440 MtrunA17_Chr6g0486831 31.132 318 194 10 42 345 29 335 6.99e-34 127
Msa0211440 MtrunA17_Chr2g0311861 30.667 300 158 9 26 318 64 320 7.07e-34 127
Msa0211440 MtrunA17_Chr4g0055911 32.722 327 175 13 21 329 4 303 1.13e-33 126
Msa0211440 MtrunA17_Chr6g0472861 30.183 328 188 12 8 318 43 346 2.09e-33 127
Msa0211440 MtrunA17_Chr1g0161111 30.793 328 193 8 26 348 132 430 2.35e-33 128
Msa0211440 MtrunA17_Chr7g0247741 28.025 314 194 7 26 332 11 299 4.93e-33 125
Msa0211440 MtrunA17_Chr4g0050031 29.429 333 193 10 26 344 62 366 1.28e-32 125
Msa0211440 MtrunA17_Chr4g0068891 29.032 341 187 13 30 350 18 323 1.74e-32 123
Msa0211440 MtrunA17_Chr7g0235981 29.766 299 177 9 61 350 54 328 3.44e-32 123
Msa0211440 MtrunA17_Chr3g0145181 30.537 298 185 12 26 318 49 329 4.08e-32 123
Msa0211440 MtrunA17_Chr8g0389941 31.494 308 173 11 44 329 44 335 5.95e-32 122
Msa0211440 MtrunA17_Chr8g0348951 28.349 321 185 10 26 332 10 299 1.05e-31 121
Msa0211440 MtrunA17_Chr1g0161041 29.814 322 196 7 26 342 96 392 1.06e-31 123
Msa0211440 MtrunA17_Chr2g0313111 27.353 340 205 13 19 350 21 326 1.10e-31 121
Msa0211440 MtrunA17_Chr4g0052251 30.556 324 186 13 24 337 27 321 1.24e-31 121
Msa0211440 MtrunA17_Chr1g0148771 28.832 274 166 7 22 292 59 306 1.50e-31 122
Msa0211440 MtrunA17_Chr3g0121141 29.259 270 167 5 48 313 21 270 1.52e-31 120
Msa0211440 MtrunA17_Chr1g0161081 29.653 317 189 8 26 337 73 360 7.66e-31 120
Msa0211440 MtrunA17_Chr3g0145201 30.000 310 192 11 17 318 672 964 1.58e-30 122
Msa0211440 MtrunA17_Chr5g0420721 32.955 176 113 3 146 318 50 223 2.22e-30 116
Msa0211440 MtrunA17_Chr4g0055871 30.061 326 190 11 21 334 4 303 4.07e-30 117
Msa0211440 MtrunA17_Chr3g0092531 29.940 334 198 10 26 349 6 313 5.03e-30 117
Msa0211440 MtrunA17_Chr7g0233661 40.000 145 79 2 181 325 1 137 6.13e-30 112
Msa0211440 MtrunA17_Chr8g0335411 29.032 310 188 7 19 318 59 346 1.63e-29 116
Msa0211440 MtrunA17_Chr4g0066991 28.618 304 162 8 26 318 67 326 1.76e-29 116
Msa0211440 MtrunA17_Chr3g0114871 29.371 286 166 10 4 281 18 275 2.59e-29 114
Msa0211440 MtrunA17_Chr7g0265351 27.723 303 194 5 51 349 56 337 5.66e-29 114
Msa0211440 MtrunA17_Chr8g0336801 37.179 156 87 4 198 349 8 156 7.81e-29 109
Msa0211440 MtrunA17_Chr7g0247991 28.896 308 178 7 25 318 66 346 8.17e-29 114
Msa0211440 MtrunA17_Chr3g0093741 27.114 343 197 9 21 349 51 354 8.94e-29 114
Msa0211440 MtrunA17_Chr2g0314371 29.078 282 178 9 26 295 52 323 1.37e-28 113
Msa0211440 MtrunA17_Chr3g0093761 25.826 333 213 8 21 349 51 353 6.32e-27 109
Msa0211440 MtrunA17_Chr4g0011311 28.980 245 147 6 26 266 67 288 1.52e-26 107
Msa0211440 MtrunA17_Chr3g0126761 34.078 179 113 3 156 332 44 219 4.20e-26 104
Msa0211440 MtrunA17_Chr3g0093751 25.150 334 215 8 21 349 51 354 1.97e-25 105
Msa0211440 MtrunA17_Chr5g0407731 27.545 334 205 10 4 329 5 309 4.78e-25 103
Msa0211440 MtrunA17_Chr5g0407781 29.022 317 191 11 26 340 5 289 1.12e-24 102
Msa0211440 MtrunA17_Chr7g0236011 27.362 307 182 9 26 318 67 346 4.48e-24 101
Msa0211440 MtrunA17_Chr1g0170631 33.129 163 108 1 156 318 3 164 1.70e-23 96.3
Msa0211440 MtrunA17_Chr2g0319521 36.508 126 78 1 141 266 1 124 1.21e-22 92.4
Msa0211440 MtrunA17_Chr5g0420881 35.294 119 74 2 201 318 1 117 1.22e-22 92.4
Msa0211440 MtrunA17_Chr6g0488511 26.623 308 174 11 25 317 2 272 3.73e-22 95.1
Msa0211440 MtrunA17_Chr2g0293931 34.270 178 104 8 159 325 10 185 4.92e-22 92.8
Msa0211440 MtrunA17_Chr4g0064771 36.420 162 99 3 159 318 29 188 8.95e-22 92.0
Msa0211440 MtrunA17_Chr4g0004061 26.384 307 189 11 26 321 9 289 1.84e-20 90.5
Msa0211440 MtrunA17_Chr8g0362741 25.714 245 140 5 26 266 67 273 5.69e-20 88.6
Msa0211440 MtrunA17_Chr4g0004071 26.282 312 192 9 26 326 9 293 1.45e-19 87.8
Msa0211440 MtrunA17_Chr8g0336831 29.703 202 121 4 26 224 60 243 4.63e-19 85.5
Msa0211440 MtrunA17_Chr4g0075471 37.288 118 70 3 196 311 23 138 8.09e-18 79.7
Msa0211440 MtrunA17_Chr4g0009561 29.952 207 122 8 133 326 103 299 1.08e-17 82.8
Msa0211440 MtrunA17_Chr8g0336871 28.108 185 116 5 169 349 3 174 1.90e-17 79.0
Msa0211440 MtrunA17_Chr8g0364171 36.937 111 68 1 156 266 18 126 1.97e-17 78.2
Msa0211440 MtrunA17_Chr2g0311611 46.479 71 33 1 201 266 1 71 2.95e-17 75.5
Msa0211440 MtrunA17_Chr1g0162341 52.381 63 30 0 288 350 9 71 3.64e-17 75.1
Msa0211440 MtrunA17_Chr3g0092581 35.443 158 95 5 166 320 1 154 2.40e-16 76.3
Msa0211440 MtrunA17_Chr3g0138351 25.260 289 183 10 45 322 28 294 4.85e-16 77.8
Msa0211440 MtrunA17_Chr8g0375581 36.364 88 53 2 177 263 1 86 5.65e-16 72.4
Msa0211440 MtrunA17_Chr7g0256741 27.778 162 113 3 159 319 129 287 1.65e-15 76.3
Msa0211440 MtrunA17_Chr4g0009541 26.486 185 127 6 149 326 114 296 2.74e-14 72.8
Msa0211440 MtrunA17_Chr1g0148781 28.249 177 112 4 162 326 129 302 4.42e-14 72.4
Msa0211440 MtrunA17_Chr1g0167921 35.537 121 70 2 158 272 51 169 4.82e-14 69.7
Msa0211440 MtrunA17_Chr7g0219991 36.111 108 65 3 158 264 250 354 7.97e-14 71.6
Msa0211440 MtrunA17_Chr1g0158011 28.488 172 119 3 158 326 72 242 4.07e-13 68.6
Msa0211440 MtrunA17_Chr8g0375641 31.707 123 79 3 1 120 26 146 1.83e-12 65.1
Msa0211440 MtrunA17_Chr1g0161101 37.113 97 49 3 202 297 407 492 1.86e-12 68.2
Msa0211440 MtrunA17_Chr1g0158021 24.255 235 143 5 12 238 35 242 2.30e-12 66.2
Msa0211440 MtrunA17_Chr8g0375591 37.975 79 47 1 26 104 46 122 2.98e-11 60.5
Msa0211440 MtrunA17_Chr8g0375661 30.534 131 85 4 1 128 26 153 3.25e-11 61.2
Msa0211440 MtrunA17_Chr8g0336791 41.558 77 43 1 26 102 60 134 5.19e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0211440 AT3G19000.1 51.412 354 163 2 1 348 1 351 3.22e-124 361
Msa0211440 AT3G19010.1 49.573 351 171 2 1 349 1 347 7.67e-123 357
Msa0211440 AT3G19010.4 49.573 351 171 2 1 349 1 347 7.67e-123 357
Msa0211440 AT3G19010.3 44.729 351 158 3 1 349 1 317 3.15e-103 306
Msa0211440 AT3G19000.2 49.265 272 129 2 1 266 1 269 1.69e-92 278
Msa0211440 AT3G19010.2 49.254 268 130 2 1 266 1 264 1.25e-88 268
Msa0211440 AT2G38240.1 35.652 345 189 10 4 337 23 345 1.51e-58 193
Msa0211440 AT4G25420.1 34.043 329 199 7 2 326 38 352 1.07e-56 189
Msa0211440 AT5G05600.1 33.735 332 196 9 1 325 35 349 7.38e-56 187
Msa0211440 AT3G21420.1 35.082 305 176 5 26 325 55 342 1.05e-53 181
Msa0211440 AT4G10490.1 33.030 330 193 9 4 326 18 326 1.40e-53 180
Msa0211440 AT3G55970.1 33.333 336 197 10 1 325 22 341 1.54e-53 180
Msa0211440 AT4G10500.1 34.385 317 178 9 4 313 20 313 2.13e-53 179
Msa0211440 AT3G11180.1 34.954 329 182 10 8 325 71 378 2.63e-53 181
Msa0211440 AT3G11180.2 34.954 329 182 10 8 325 71 378 3.10e-53 181
Msa0211440 AT5G51810.1 33.435 329 197 7 2 326 40 350 1.57e-49 170
Msa0211440 AT5G07200.1 33.435 329 193 7 8 326 41 353 2.10e-49 170
Msa0211440 AT1G60980.1 33.951 324 195 9 8 326 40 349 2.94e-48 167
Msa0211440 AT1G55290.1 32.492 317 178 8 8 314 41 331 2.57e-46 161
Msa0211440 AT5G24530.1 31.611 329 189 9 7 325 18 320 5.13e-46 160
Msa0211440 AT1G78550.1 31.104 299 184 7 26 321 53 332 1.46e-45 159
Msa0211440 AT4G16330.2 31.210 314 176 8 22 326 63 345 4.63e-45 158
Msa0211440 AT4G21200.1 33.681 288 160 8 17 298 30 292 7.04e-45 157
Msa0211440 AT1G15550.1 31.609 348 198 11 11 335 17 347 7.75e-44 155
Msa0211440 AT1G03400.1 29.582 311 188 8 46 349 65 351 7.99e-44 154
Msa0211440 AT5G08640.2 32.249 338 190 9 8 333 23 333 1.18e-43 154
Msa0211440 AT5G08640.1 32.249 338 190 9 8 333 23 333 1.18e-43 154
Msa0211440 AT1G17020.1 31.667 300 177 8 26 318 53 331 3.66e-43 153
Msa0211440 AT1G04350.1 29.834 362 210 11 1 349 30 360 6.20e-43 152
Msa0211440 AT1G17010.1 30.488 328 201 9 26 349 54 358 6.21e-43 152
Msa0211440 AT1G03410.2 30.030 333 196 10 26 349 57 361 7.34e-43 152
Msa0211440 AT1G77330.1 32.722 327 175 11 25 337 2 297 8.75e-43 150
Msa0211440 AT4G25420.2 33.457 269 161 7 2 266 38 292 1.75e-42 149
Msa0211440 AT1G03410.1 30.030 333 196 10 26 349 94 398 2.18e-42 152
Msa0211440 AT1G80330.1 32.615 325 179 11 24 336 47 343 3.41e-42 150
Msa0211440 AT4G25300.1 34.191 272 152 8 26 291 52 302 3.75e-42 150
Msa0211440 AT3G13610.1 29.143 350 210 9 8 349 42 361 5.32e-42 150
Msa0211440 AT5G59530.1 29.305 331 203 7 26 349 58 364 5.98e-42 150
Msa0211440 AT5G43440.1 30.530 321 191 8 26 338 62 358 2.43e-41 148
Msa0211440 AT3G51240.1 29.355 310 194 7 3 306 14 304 5.24e-41 147
Msa0211440 AT2G36690.2 32.523 329 188 13 1 317 29 335 6.90e-41 147
Msa0211440 AT2G36690.1 32.523 329 188 13 1 317 29 335 6.90e-41 147
Msa0211440 AT5G59540.1 29.393 313 188 8 15 318 51 339 8.24e-41 147
Msa0211440 AT1G44090.1 33.007 306 183 9 26 324 63 353 1.63e-40 147
Msa0211440 AT4G25310.1 33.829 269 156 8 54 318 76 326 2.38e-40 145
Msa0211440 AT1G06620.1 32.781 302 169 10 26 318 62 338 2.94e-40 145
Msa0211440 AT3G60290.1 30.747 348 212 11 4 343 27 353 4.41e-40 145
Msa0211440 AT4G22880.1 30.000 310 196 8 26 329 47 341 6.49e-40 144
Msa0211440 AT4G22880.2 30.000 310 196 8 26 329 47 341 6.49e-40 144
Msa0211440 AT4G22880.3 30.000 310 196 8 26 329 47 341 6.49e-40 144
Msa0211440 AT5G43450.1 29.494 356 201 10 1 338 32 355 1.73e-39 143
Msa0211440 AT3G46500.5 31.511 311 187 10 42 336 25 325 1.12e-38 140
Msa0211440 AT1G03400.2 27.729 339 186 10 46 349 65 379 1.18e-38 141
Msa0211440 AT2G44800.1 31.420 331 199 10 3 326 26 335 1.73e-38 140
Msa0211440 AT5G05600.2 33.083 266 154 9 8 266 42 290 2.99e-38 138
Msa0211440 AT1G50960.1 29.560 318 191 7 13 325 25 314 3.45e-38 139
Msa0211440 AT1G80340.1 30.990 313 183 8 26 331 50 336 7.42e-38 139
Msa0211440 AT1G78550.2 30.943 265 165 6 60 321 5 254 8.12e-38 137
Msa0211440 AT2G30830.1 31.561 301 175 10 26 318 54 331 1.16e-37 138
Msa0211440 AT1G04380.1 29.464 336 200 9 21 349 40 345 1.23e-37 138
Msa0211440 AT1G78440.1 30.031 323 185 10 26 337 18 310 2.34e-37 137
Msa0211440 AT5G51810.2 33.088 272 160 7 2 269 40 293 3.60e-37 135
Msa0211440 AT1G06650.2 30.357 336 196 12 24 349 62 369 3.97e-37 137
Msa0211440 AT3G61400.1 30.421 309 175 11 26 318 60 344 4.63e-37 137
Msa0211440 AT3G12900.1 29.042 334 207 9 1 328 30 339 7.48e-37 136
Msa0211440 AT3G55970.2 32.130 277 161 10 1 266 22 282 2.54e-36 133
Msa0211440 AT5G58660.1 33.333 297 161 9 26 303 34 312 2.69e-36 135
Msa0211440 AT4G21690.1 28.788 330 191 9 21 335 42 342 2.90e-36 134
Msa0211440 AT5G20400.1 29.153 295 191 7 26 318 45 323 3.25e-36 134
Msa0211440 AT1G30040.1 28.923 325 195 12 20 337 25 320 1.04e-35 133
Msa0211440 AT2G30840.1 29.102 323 187 11 14 318 37 335 6.01e-35 131
Msa0211440 AT1G06645.1 28.228 333 204 12 24 349 75 379 2.09e-34 130
Msa0211440 AT4G16330.1 32.016 253 142 7 83 326 8 239 2.28e-34 127
Msa0211440 AT3G50210.4 27.219 338 212 9 21 334 3 330 7.66e-34 127
Msa0211440 AT3G50210.1 27.219 338 212 9 21 334 3 330 7.66e-34 127
Msa0211440 AT3G50210.3 27.219 338 212 9 21 334 3 330 7.66e-34 127
Msa0211440 AT1G05010.1 31.618 272 153 8 48 310 21 268 9.66e-34 127
Msa0211440 AT1G12010.1 28.289 304 187 8 27 326 8 284 1.51e-33 126
Msa0211440 AT5G63600.2 28.990 307 190 8 23 326 30 311 3.23e-33 126
Msa0211440 AT3G46490.1 30.000 320 207 9 26 333 9 323 5.51e-33 125
Msa0211440 AT1G49390.1 28.956 297 189 8 26 318 45 323 5.72e-33 125
Msa0211440 AT3G49630.1 27.052 329 210 9 26 335 9 326 1.38e-32 124
Msa0211440 AT5G63600.1 28.431 306 192 7 23 326 30 310 3.09e-32 123
Msa0211440 AT1G47990.1 28.527 319 175 9 26 325 15 299 3.51e-32 123
Msa0211440 AT3G49620.1 27.356 329 207 11 26 334 34 350 4.97e-32 123
Msa0211440 AT5G63590.1 31.333 300 180 10 26 320 14 292 5.85e-32 122
Msa0211440 AT1G62380.1 27.632 304 189 8 27 326 8 284 7.93e-32 122
Msa0211440 AT1G06640.1 29.545 308 177 10 24 318 62 342 1.55e-31 122
Msa0211440 AT1G02400.1 29.655 290 176 9 47 325 37 309 4.74e-31 120
Msa0211440 AT3G46500.7 30.268 261 162 9 42 292 25 275 4.80e-31 119
Msa0211440 AT5G20550.1 27.687 307 203 9 26 329 45 335 5.28e-31 120
Msa0211440 AT3G46490.2 30.565 301 191 10 26 313 9 304 5.53e-31 119
Msa0211440 AT2G25450.1 27.429 350 213 11 14 349 37 359 1.17e-30 119
Msa0211440 AT3G49630.3 26.380 326 210 9 29 335 8 322 1.23e-30 119
Msa0211440 AT5G54000.2 27.119 295 197 7 26 318 46 324 1.32e-30 119
Msa0211440 AT2G30840.3 28.483 323 183 12 14 318 37 329 1.39e-30 119
Msa0211440 AT2G34555.1 29.560 318 189 12 26 337 27 315 2.78e-30 118
Msa0211440 AT5G12270.1 27.108 332 215 8 1 326 30 340 4.79e-30 118
Msa0211440 AT3G51240.2 31.443 194 120 3 113 306 40 220 5.19e-30 116
Msa0211440 AT4G25300.2 41.007 139 78 3 155 291 72 208 9.49e-30 115
Msa0211440 AT5G58660.2 33.205 259 137 8 26 266 34 274 1.26e-29 115
Msa0211440 AT3G46500.10 33.493 209 124 6 140 336 46 251 1.42e-29 114
Msa0211440 AT3G46500.1 33.493 209 124 6 140 336 46 251 1.42e-29 114
Msa0211440 AT1G06620.2 32.389 247 136 9 26 266 62 283 1.19e-28 112
Msa0211440 AT4G25310.2 29.630 270 144 7 54 321 76 301 2.85e-28 112
Msa0211440 AT5G07480.1 27.812 320 209 8 4 318 24 326 3.72e-28 113
Msa0211440 AT3G46500.4 34.211 190 112 5 159 336 1 189 4.00e-28 108
Msa0211440 AT3G47190.1 29.965 287 157 13 54 324 48 306 7.00e-28 111
Msa0211440 AT5G43440.2 30.000 250 148 6 26 271 62 288 9.70e-28 110
Msa0211440 AT5G59540.2 27.519 258 157 7 15 266 51 284 1.09e-27 110
Msa0211440 AT5G51310.1 28.086 324 191 10 26 332 5 303 1.74e-27 110
Msa0211440 AT4G23340.1 27.986 293 173 9 54 332 30 298 2.49e-27 110
Msa0211440 AT5G43935.1 28.797 316 171 9 23 329 16 286 7.82e-27 108
Msa0211440 AT5G43450.2 28.571 287 158 9 1 272 32 286 1.69e-26 107
Msa0211440 AT3G61400.2 29.032 248 150 8 26 266 60 288 1.91e-26 107
Msa0211440 AT1G35190.1 30.671 313 191 10 48 346 26 326 2.88e-26 107
Msa0211440 AT5G54000.1 27.132 258 169 6 65 318 2 244 1.18e-25 104
Msa0211440 AT1G49390.2 27.907 258 167 7 65 318 2 244 2.68e-25 103
Msa0211440 AT4G16765.6 35.052 194 116 5 143 329 49 239 3.56e-25 102
Msa0211440 AT4G16765.1 35.052 194 116 5 143 329 49 239 3.56e-25 102
Msa0211440 AT4G16765.2 35.052 194 116 5 143 329 49 239 3.56e-25 102
Msa0211440 AT5G63580.2 29.839 248 147 6 23 266 16 240 4.26e-25 102
Msa0211440 AT1G06650.1 29.388 245 149 6 24 265 62 285 6.83e-25 103
Msa0211440 AT2G19590.1 28.197 305 170 11 26 318 11 278 8.06e-25 102
Msa0211440 AT1G04380.2 28.968 252 149 7 21 268 40 265 9.82e-25 102
Msa0211440 AT1G35190.2 28.939 311 176 10 48 346 26 303 1.42e-24 102
Msa0211440 AT5G63580.1 29.675 246 146 6 23 264 16 238 2.06e-24 100
Msa0211440 AT4G16765.3 36.264 182 106 5 143 317 49 227 4.29e-24 99.4
Msa0211440 AT1G30040.2 29.134 254 148 11 20 266 25 253 1.20e-23 99.0
Msa0211440 AT5G63595.1 25.987 304 175 9 9 301 3 267 4.50e-23 97.4
Msa0211440 AT2G30840.2 26.592 267 157 8 14 265 37 279 1.22e-22 97.1
Msa0211440 AT3G49630.2 30.000 190 125 4 152 335 66 253 1.38e-22 95.9
Msa0211440 AT1G14130.1 27.852 298 186 7 26 321 9 279 1.39e-22 96.7
Msa0211440 AT3G46500.3 30.435 184 113 6 115 292 27 201 5.12e-22 93.2
Msa0211440 AT3G50210.2 29.381 194 125 4 152 334 56 248 1.05e-21 93.2
Msa0211440 AT1G06640.2 28.235 255 153 7 24 272 62 292 5.72e-21 92.4
Msa0211440 AT3G46500.9 30.288 208 108 6 140 336 46 227 7.97e-21 90.1
Msa0211440 AT1G52800.1 26.032 315 192 9 19 321 3 288 1.61e-20 90.9
Msa0211440 AT5G07480.2 31.977 172 111 3 152 318 47 217 5.37e-20 88.2
Msa0211440 AT1G06640.3 28.112 249 149 7 24 266 62 286 6.03e-20 89.0
Msa0211440 AT3G46500.6 32.857 140 87 4 159 292 32 170 6.43e-20 86.7
Msa0211440 AT3G46500.8 32.857 140 87 4 159 292 32 170 6.43e-20 86.7
Msa0211440 AT2G19590.2 28.727 275 152 10 56 318 21 263 7.03e-20 89.0
Msa0211440 AT3G46480.1 29.577 284 145 10 80 345 37 283 7.71e-20 88.6
Msa0211440 AT4G23340.2 29.348 184 116 5 159 332 1 180 1.33e-19 86.3
Msa0211440 AT1G14120.2 25.817 306 199 7 20 323 1 280 5.26e-19 86.7
Msa0211440 AT1G14120.1 25.817 306 199 7 20 323 1 280 5.26e-19 86.7
Msa0211440 AT1G14120.3 25.817 306 199 7 20 323 1 280 5.26e-19 86.7
Msa0211440 AT1G02400.2 28.049 246 150 8 47 282 37 265 2.09e-18 84.3
Msa0211440 AT3G46500.2 29.697 165 102 5 115 273 27 183 7.29e-18 80.9
Msa0211440 AT4G16765.5 37.288 118 70 2 215 329 77 193 1.14e-16 77.8
Msa0211440 AT1G52820.1 22.896 297 211 9 26 321 12 291 1.40e-16 79.7
Msa0211440 AT1G80320.1 27.094 203 139 5 149 345 116 315 1.46e-16 79.7
Msa0211440 AT4G16770.1 29.386 228 136 8 26 245 22 232 8.50e-15 73.9
Msa0211440 AT4G16765.4 34.058 138 82 4 143 273 49 184 1.69e-14 71.6
Msa0211440 AT4G03070.1 24.024 333 211 11 4 326 1 301 5.37e-14 72.4
Msa0211440 AT4G22870.1 36.471 85 53 1 243 326 10 94 2.61e-13 66.2
Msa0211440 AT1G52790.1 26.471 170 118 4 154 321 120 284 3.52e-13 69.7
Msa0211440 AT4G22870.2 37.349 83 51 1 245 326 53 135 6.44e-13 66.2
Msa0211440 AT1G15540.1 23.151 311 204 9 22 321 5 291 1.33e-11 65.1
Msa0211440 AT1G15540.4 23.151 311 204 9 22 321 5 291 1.33e-11 65.1
Msa0211440 AT1G15540.2 23.151 311 204 9 22 321 8 294 1.33e-11 65.1
Msa0211440 AT1G15540.3 23.151 311 204 9 22 321 12 298 1.54e-11 65.1

Find 97 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAACAATTACCTAAAATT+TGG 0.169045 2_1:+52716888 None:intergenic
ATCTTGGCCAAGAATATTTA+TGG 0.172376 2_1:+52715311 None:intergenic
CTGCTGGTTGTTGGAATATT+GGG 0.183332 2_1:+52717249 None:intergenic
TTTCCAGTCTTTGATATTCT+TGG 0.204695 2_1:+52717016 None:intergenic
CTATCTTATAGTGATAAATT+TGG 0.242697 2_1:+52713372 None:intergenic
TCTGCTGGTTGTTGGAATAT+TGG 0.289137 2_1:+52717248 None:intergenic
CAAAATATAGACCTTTCAAT+TGG 0.314729 2_1:-52713454 Msa0211440:CDS
GCTTCTGTGATGGAGAAATT+TGG 0.321050 2_1:+52717299 None:intergenic
ATTGTTCTTTGCTCAAAGTA+TGG 0.321834 2_1:-52717102 Msa0211440:CDS
AAATTTGGTCTGTGTTCTTC+GGG 0.323812 2_1:+52717314 None:intergenic
TAAAATTTGGAGGATATAGA+AGG 0.325245 2_1:+52716901 None:intergenic
GAAATTTGGTCTGTGTTCTT+CGG 0.331399 2_1:+52717313 None:intergenic
TAACATTGGTGATCTCATTC+AGG 0.331758 2_1:-52715208 Msa0211440:intron
GTCAATTACGGGAACTCCTT+TGG 0.341162 2_1:+52717277 None:intergenic
ATGTTAACAATGTAAGCATT+TGG 0.341220 2_1:+52715225 None:intergenic
TGTTAACAATGTAAGCATTT+GGG 0.344715 2_1:+52715226 None:intergenic
GTTGGCACCATAAATATTCT+TGG 0.352029 2_1:-52715318 Msa0211440:CDS
CTTGGCCAAGATGAGGTTGC+AGG 0.377825 2_1:-52715300 Msa0211440:CDS
AAAATATAGACCTTTCAATT+GGG 0.388445 2_1:-52713453 Msa0211440:CDS
GAACTTATAGCTTTGAGCTT+AGG 0.396485 2_1:-52715459 Msa0211440:CDS
CCCATGGTTGTTCTAATGCT+AGG 0.399692 2_1:+52717362 None:intergenic
ACGAGTGACTACAACTGAAT+TGG 0.410959 2_1:-52713300 Msa0211440:three_prime_UTR
CCTTCCCCTCACCTAGCTCT+TGG 0.425670 2_1:-52715360 Msa0211440:CDS
TATTGGGGAGAGGTCAATTA+CGG 0.426320 2_1:+52717265 None:intergenic
CCATGGTTGTTCTAATGCTA+GGG 0.431191 2_1:+52717363 None:intergenic
ATGGAGGAGAAGAGGAAGGT+TGG 0.434612 2_1:-52717083 Msa0211440:CDS
TTTGGAGGATATAGAAGGGT+TGG 0.445504 2_1:+52716906 None:intergenic
AACTCCTTTGGCTTCTGTGA+TGG 0.447426 2_1:+52717289 None:intergenic
AGCGTAAAATAGATCAAGAA+TGG 0.449486 2_1:-52715266 Msa0211440:CDS
CTACACCAATGTAAAGCCTT+TGG 0.451048 2_1:-52713504 Msa0211440:CDS
AACCTAGTGAAGGAAATTGC+AGG 0.466714 2_1:-52717209 Msa0211440:CDS
TCTTATAGTGATAAATTTGG+AGG 0.482272 2_1:+52713375 None:intergenic
CAAGACCTGCAACCTCATCT+TGG 0.484026 2_1:+52715295 None:intergenic
TATTGAAGAGATGGAAAAGT+TGG 0.485176 2_1:-52715496 Msa0211440:CDS
AACAATTACCTAAAATTTGG+AGG 0.489440 2_1:+52716891 None:intergenic
CCTCACCTAGCTCTTGGCGT+TGG 0.492532 2_1:-52715354 Msa0211440:CDS
CAGATGGATCTGCTGGTTGT+TGG 0.495324 2_1:+52717240 None:intergenic
ACAATGTAAGCATTTGGGAT+TGG 0.498237 2_1:+52715231 None:intergenic
TGAATAGCAGATGGATCTGC+TGG 0.503422 2_1:+52717233 None:intergenic
TGCAGGTGCATGCAAGGAGT+GGG 0.505336 2_1:-52717192 Msa0211440:CDS
ATTGGGGAGAGGTCAATTAC+GGG 0.505761 2_1:+52717266 None:intergenic
AAATATAGACCTTTCAATTG+GGG 0.507294 2_1:-52713452 Msa0211440:CDS
AGTCCAAGTGGTTATCATGA+TGG 0.526871 2_1:-52717047 Msa0211440:CDS
AATGCTTACATTGTTAACAT+TGG 0.527333 2_1:-52715222 Msa0211440:CDS
CTCAAAGTATGGAGGAGAAG+AGG 0.536685 2_1:-52717091 Msa0211440:CDS
GGAAATTGCAGGTGCATGCA+AGG 0.538125 2_1:-52717198 Msa0211440:CDS
CCAAGAGCTAGGTGAGGGGA+AGG 0.538254 2_1:+52715360 None:intergenic
GCACGAGTATATTGAAGAGA+TGG 0.539012 2_1:-52715505 Msa0211440:CDS
ATGATGATCGACTTACTCAA+TGG 0.540360 2_1:-52716935 Msa0211440:CDS
TTACATTGGTGTAGTGTGAT+GGG 0.545365 2_1:+52713513 None:intergenic
TAGAACAACCATGGGAGAAG+TGG 0.545383 2_1:-52717354 Msa0211440:exon
TCACCAAGAATATCAAAGAC+TGG 0.547783 2_1:-52717019 Msa0211440:CDS
GCGTAAAATAGATCAAGAAT+GGG 0.551367 2_1:-52715265 Msa0211440:CDS
TTCTTGCAAGTCACAAACCA+TGG 0.552007 2_1:-52717167 Msa0211440:CDS
CACCAATGTAAAGCCTTTGG+AGG 0.553153 2_1:-52713501 Msa0211440:CDS
TTTACATTGGTGTAGTGTGA+TGG 0.553629 2_1:+52713512 None:intergenic
CACCTGCAATTTCCTTCACT+AGG 0.560293 2_1:+52717207 None:intergenic
GTTGGAAGTCACAAGGATGT+TGG 0.560770 2_1:-52715336 Msa0211440:CDS
AAAGTTGGCACATAAACTGC+TGG 0.561160 2_1:-52715481 Msa0211440:CDS
TGCTATTCAAAACCTAGTGA+AGG 0.568428 2_1:-52717219 Msa0211440:CDS
GACTTCCAACGCCAAGAGCT+AGG 0.570091 2_1:+52715349 None:intergenic
AGATGCTTGCCCCAATTGAA+AGG 0.576941 2_1:+52713443 None:intergenic
GTTGTTGGAATATTGGGGAG+AGG 0.580421 2_1:+52717255 None:intergenic
TCTTGCAAGTCACAAACCAT+GGG 0.585796 2_1:-52717166 Msa0211440:CDS
AAAATTTGGAGGATATAGAA+GGG 0.586653 2_1:+52716902 None:intergenic
TTGCAGGTGCATGCAAGGAG+TGG 0.589476 2_1:-52717193 Msa0211440:CDS
GGTTTGTAAATCAACGTATG+TGG 0.593126 2_1:+52717384 None:intergenic
CAACGCCAAGAGCTAGGTGA+GGG 0.595616 2_1:+52715355 None:intergenic
CCCTAGCATTAGAACAACCA+TGG 0.597806 2_1:-52717363 Msa0211440:exon
TGTAAATCAACGTATGTGGA+AGG 0.600888 2_1:+52717388 None:intergenic
ATCCTCCAAAGGCTTTACAT+TGG 0.602076 2_1:+52713499 None:intergenic
AAATATTCTTGGCCAAGATG+AGG 0.602704 2_1:-52715307 Msa0211440:CDS
AGGTGAGGGGAAGGGCATTG+AGG 0.604097 2_1:+52715369 None:intergenic
GTTCTTTGCTCAAAGTATGG+AGG 0.604774 2_1:-52717099 Msa0211440:CDS
AAGTATGGAGGAGAAGAGGA+AGG 0.606963 2_1:-52717087 Msa0211440:CDS
TCATTTATAAGATCCTCCAA+AGG 0.608031 2_1:+52713488 None:intergenic
AGATGAGTCCACTTCTCCCA+TGG 0.616174 2_1:+52717346 None:intergenic
AGTCTCTGTCTAATACTCAA+AGG 0.616671 2_1:+52717140 None:intergenic
TGCTGGTTGTTGGAATATTG+GGG 0.624256 2_1:+52717250 None:intergenic
CAAGAGCTAGGTGAGGGGAA+GGG 0.624760 2_1:+52715361 None:intergenic
GTGTGATGGGTACAAACCAA+AGG 0.626445 2_1:+52713526 None:intergenic
TCAGTGAGAGGAACCACGGT+AGG 0.632946 2_1:+52716966 None:intergenic
CAATGATGCTTATGAGAGTG+TGG 0.635076 2_1:-52713594 Msa0211440:CDS
TCTCCATCATGATAACCACT+TGG 0.636774 2_1:+52717044 None:intergenic
CCTAGCATTAGAACAACCAT+GGG 0.637693 2_1:-52717362 Msa0211440:exon
TTCTCCATCACAGAAGCCAA+AGG 0.639030 2_1:-52717293 Msa0211440:CDS
TCATGTTCATCATCAGTGAG+AGG 0.645293 2_1:+52716954 None:intergenic
TAATACTCAAAGGTACCCCA+TGG 0.654571 2_1:+52717150 None:intergenic
GCAGGTGCATGCAAGGAGTG+GGG 0.659561 2_1:-52717191 Msa0211440:CDS
AAGTGGTTATCATGATGGAG+AGG 0.662165 2_1:-52717042 Msa0211440:CDS
ATCATCAGTGAGAGGAACCA+CGG 0.665108 2_1:+52716962 None:intergenic
TCTTGGCGTTGGAAGTCACA+AGG 0.671209 2_1:-52715343 Msa0211440:CDS
AGAGATGATATCAGTCCAAG+TGG 0.677627 2_1:-52717059 Msa0211440:CDS
AACGCCAAGAGCTAGGTGAG+GGG 0.677724 2_1:+52715356 None:intergenic
CCAACGCCAAGAGCTAGGTG+AGG 0.678847 2_1:+52715354 None:intergenic
TCTTTGCAGAGATCCTACCG+TGG 0.750480 2_1:-52716979 Msa0211440:CDS
CTTGCAAGTCACAAACCATG+GGG 0.765055 2_1:-52717165 Msa0211440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAACTTAAATAATTTAAG+TGG + chr2_1:52714021-52714040 None:intergenic 10.0%
!! GTTATTTAATTGTAATAAAT+TGG + chr2_1:52714084-52714103 None:intergenic 10.0%
!! TTTATTACAATTAAATAACA+AGG - chr2_1:52714085-52714104 Msa0211440:intron 10.0%
!!! CAAATAAAAAAATTAGTTTT+TGG + chr2_1:52714207-52714226 None:intergenic 10.0%
!! ATATAAGTAAACAAATATTA+TGG - chr2_1:52714508-52714527 Msa0211440:intron 10.0%
!!! AAATATTTTAATTTGATGTT+TGG - chr2_1:52715486-52715505 Msa0211440:CDS 10.0%
!! ATTCTATAAATAAATATGTA+TGG + chr2_1:52715560-52715579 None:intergenic 10.0%
!!! AAAGTTATTGTTTAAATTTT+AGG + chr2_1:52716133-52716152 None:intergenic 10.0%
!!! ATAACTTTTAACTAATTAAT+TGG - chr2_1:52716145-52716164 Msa0211440:intron 10.0%
!!! TTTTAAAAATTATAAAAGTG+TGG - chr2_1:52716554-52716573 Msa0211440:intron 10.0%
!! TAAATAACTTAAAAGGATTA+TGG + chr2_1:52713963-52713982 None:intergenic 15.0%
!! TTACAGTTAAATAACTTAAA+AGG + chr2_1:52713970-52713989 None:intergenic 15.0%
!! ATTAATTTAAAAGACTTAAG+TGG - chr2_1:52714039-52714058 Msa0211440:intron 15.0%
!! TTAGCCAATAATTTATTATT+TGG - chr2_1:52714121-52714140 Msa0211440:intron 15.0%
!!! TAGTTAAATATATTTTACCA+GGG + chr2_1:52714290-52714309 None:intergenic 15.0%
!! ATATATATATATAGTGAGAA+TGG - chr2_1:52714574-52714593 Msa0211440:intron 15.0%
!!! TTGTTCATATTATTTTTTCT+GGG - chr2_1:52714795-52714814 Msa0211440:intron 15.0%
!!! AGGTTTATAATTTAATTTAC+TGG - chr2_1:52714862-52714881 Msa0211440:intron 15.0%
!!! GGTTTATAATTTAATTTACT+GGG - chr2_1:52714863-52714882 Msa0211440:intron 15.0%
!!! AATTAAAATCATGTGTTTTA+CGG + chr2_1:52714922-52714941 None:intergenic 15.0%
!!! GATTTTAATTTTTGTATAAG+TGG - chr2_1:52714932-52714951 Msa0211440:intron 15.0%
!! TTAAAATTTCAATCTTAAGT+GGG + chr2_1:52716582-52716601 None:intergenic 15.0%
!! TACTATATGAATTGTATTTA+TGG - chr2_1:52716922-52716941 Msa0211440:CDS 15.0%
!! ACTATATGAATTGTATTTAT+GGG - chr2_1:52716923-52716942 Msa0211440:CDS 15.0%
!! TGAAACAATTACCTAAAATT+TGG + chr2_1:52713692-52713711 None:intergenic 20.0%
!! GTTGTTTAACCTAAATTATT+CGG + chr2_1:52713939-52713958 None:intergenic 20.0%
!!! GTAGTTAAATATATTTTACC+AGG + chr2_1:52714291-52714310 None:intergenic 20.0%
!! AGATAAGAAAGATTATGAAA+AGG + chr2_1:52714745-52714764 None:intergenic 20.0%
!!! CTTGTTCATATTATTTTTTC+TGG - chr2_1:52714794-52714813 Msa0211440:intron 20.0%
!!! AAATTGACTCTCAAATAAAT+TGG - chr2_1:52715009-52715028 Msa0211440:intron 20.0%
!!! AAGTTTTGAAGAATTTTTCA+AGG - chr2_1:52715153-52715172 Msa0211440:intron 20.0%
!! TTTGTCTCTTGATTAATTAA+GGG + chr2_1:52715469-52715488 None:intergenic 20.0%
!! ATTTGTCTCTTGATTAATTA+AGG + chr2_1:52715470-52715489 None:intergenic 20.0%
!! TTGAATTTCATTCATATTTC+CGG + chr2_1:52715655-52715674 None:intergenic 20.0%
!! GATAATGTGTTTATAAATGA+GGG + chr2_1:52716062-52716081 None:intergenic 20.0%
!!! TGATAATGTGTTTATAAATG+AGG + chr2_1:52716063-52716082 None:intergenic 20.0%
!! TCATTTAAGTACTCAAAAAT+TGG + chr2_1:52716350-52716369 None:intergenic 20.0%
!!! TTGAGTACTTAAATGATTTT+CGG - chr2_1:52716354-52716373 Msa0211440:intron 20.0%
!! GTTAAAATTTCAATCTTAAG+TGG + chr2_1:52716583-52716602 None:intergenic 20.0%
!! TACTAATTAGATACCTTTAT+TGG + chr2_1:52716646-52716665 None:intergenic 20.0%
!!! AAAGATATTTTGATATGTTG+AGG + chr2_1:52716902-52716921 None:intergenic 20.0%
!! AAAATATAGACCTTTCAATT+GGG - chr2_1:52717124-52717143 Msa0211440:CDS 20.0%
!!! TATTTTCAAGAAGAAAAATG+TGG - chr2_1:52717175-52717194 Msa0211440:CDS 20.0%
!!! ATTTTCAAGAAGAAAAATGT+GGG - chr2_1:52717176-52717195 Msa0211440:CDS 20.0%
!! CTATCTTATAGTGATAAATT+TGG + chr2_1:52717208-52717227 None:intergenic 20.0%
! AAAATTTGGAGGATATAGAA+GGG + chr2_1:52713678-52713697 None:intergenic 25.0%
! TAAAATTTGGAGGATATAGA+AGG + chr2_1:52713679-52713698 None:intergenic 25.0%
!! TTCTATATCCTCCAAATTTT+AGG - chr2_1:52713678-52713697 Msa0211440:intron 25.0%
! AACAATTACCTAAAATTTGG+AGG + chr2_1:52713689-52713708 None:intergenic 25.0%
! CGATCAATGAATAATGAATA+TGG + chr2_1:52713723-52713742 None:intergenic 25.0%
!!! TTTTTGGTTCCGAATAATTT+AGG - chr2_1:52713833-52713852 Msa0211440:intron 25.0%
! CAATTAAATAACAAGGACTT+CGG - chr2_1:52714092-52714111 Msa0211440:intron 25.0%
! GTGGCCAAATAATAAATTAT+TGG + chr2_1:52714128-52714147 None:intergenic 25.0%
! TTTCATCATATTGACACATT+CGG - chr2_1:52714385-52714404 Msa0211440:intron 25.0%
! CGGTATATTAAACAACTAAA+AGG - chr2_1:52714405-52714424 Msa0211440:intron 25.0%
! TGTTAACAATGTAAGCATTT+GGG + chr2_1:52715354-52715373 None:intergenic 25.0%
! ATGTTAACAATGTAAGCATT+TGG + chr2_1:52715355-52715374 None:intergenic 25.0%
! AATGCTTACATTGTTAACAT+TGG - chr2_1:52715355-52715374 Msa0211440:CDS 25.0%
! TTGTCTCTTGATTAATTAAG+GGG + chr2_1:52715468-52715487 None:intergenic 25.0%
!!! ATTACTACTAGTTTTTGAAG+AGG - chr2_1:52716256-52716275 Msa0211440:intron 25.0%
!! TGAGTACTTAAATGATTTTC+GGG - chr2_1:52716355-52716374 Msa0211440:intron 25.0%
! AAAAATGTGTATGAGATGTT+GGG + chr2_1:52716482-52716501 None:intergenic 25.0%
! TAAAAATGTGTATGAGATGT+TGG + chr2_1:52716483-52716502 None:intergenic 25.0%
! TTACAAAGGAAAAAAACACA+CGG + chr2_1:52716743-52716762 None:intergenic 25.0%
! GTACACTATATGATTTACAA+AGG + chr2_1:52716757-52716776 None:intergenic 25.0%
! TTGCACGTCTAATATAATAT+CGG + chr2_1:52716779-52716798 None:intergenic 25.0%
! ATTATATTAGACGTGCAAAA+TGG - chr2_1:52716781-52716800 Msa0211440:intron 25.0%
!!! CGTTTATGATTTTTTTGGAT+AGG + chr2_1:52716833-52716852 None:intergenic 25.0%
!!! TGAAAGGTCTATATTTTGAA+GGG + chr2_1:52717121-52717140 None:intergenic 25.0%
!!! TTGAAAGGTCTATATTTTGA+AGG + chr2_1:52717122-52717141 None:intergenic 25.0%
! CAAAATATAGACCTTTCAAT+TGG - chr2_1:52717123-52717142 Msa0211440:CDS 25.0%
! AAATATAGACCTTTCAATTG+GGG - chr2_1:52717125-52717144 Msa0211440:CDS 25.0%
!!! TTTTCAAGAAGAAAAATGTG+GGG - chr2_1:52717177-52717196 Msa0211440:CDS 25.0%
! TCTTATAGTGATAAATTTGG+AGG + chr2_1:52717205-52717224 None:intergenic 25.0%
ATTGTTCTTTGCTCAAAGTA+TGG - chr2_1:52713475-52713494 Msa0211440:CDS 30.0%
TTTCCAGTCTTTGATATTCT+TGG + chr2_1:52713564-52713583 None:intergenic 30.0%
TTCATAGTCTCAATTTGGTT+TGG - chr2_1:52713743-52713762 Msa0211440:intron 30.0%
!! ACATGTCACAGTTTACTTTT+TGG - chr2_1:52713817-52713836 Msa0211440:intron 30.0%
!!! CTTTTTGGTTCCGAATAATT+TGG - chr2_1:52713832-52713851 Msa0211440:intron 30.0%
!! ACATGTCACAGTTTACTTTT+TGG - chr2_1:52713817-52713836 Msa0211440:intron 30.0%
TATTATATATTTAGCTGCCC+TGG - chr2_1:52714270-52714289 Msa0211440:intron 30.0%
!! GTCTTTAGTCTTTACTCTTT+TGG - chr2_1:52714440-52714459 Msa0211440:intron 30.0%
AAAGATTATGAAAAGGTAGC+AGG + chr2_1:52714738-52714757 None:intergenic 30.0%
!! GGGTTAGCTTCATAAATAAT+TGG - chr2_1:52714815-52714834 Msa0211440:intron 30.0%
! AAATCATGTGTTTTACGGTT+TGG + chr2_1:52714917-52714936 None:intergenic 30.0%
! TTACCATTATAGAGTGTTAG+TGG + chr2_1:52714991-52715010 None:intergenic 30.0%
AAATTGATGTCAATATGAGC+AGG - chr2_1:52715041-52715060 Msa0211440:intron 30.0%
AATTGATGTCAATATGAGCA+GGG - chr2_1:52715042-52715061 Msa0211440:intron 30.0%
TATTGAAGAGATGGAAAAGT+TGG - chr2_1:52715081-52715100 Msa0211440:intron 30.0%
ATCTTGGCCAAGAATATTTA+TGG + chr2_1:52715269-52715288 None:intergenic 30.0%
AGCGTAAAATAGATCAAGAA+TGG - chr2_1:52715311-52715330 Msa0211440:CDS 30.0%
GCGTAAAATAGATCAAGAAT+GGG - chr2_1:52715312-52715331 Msa0211440:CDS 30.0%
TACTTATGGGGTTATTCATA+CGG - chr2_1:52715392-52715411 Msa0211440:CDS 30.0%
AGCTATGCAATTCATAACAA+TGG + chr2_1:52715435-52715454 None:intergenic 30.0%
TTCTTATAAACACCATGAAC+TGG + chr2_1:52715624-52715643 None:intergenic 30.0%
TTAGATACCTTTATTGGAGA+GGG + chr2_1:52716640-52716659 None:intergenic 30.0%
ATTAGATACCTTTATTGGAG+AGG + chr2_1:52716641-52716660 None:intergenic 30.0%
!!! GTTGGCGTTTATGATTTTTT+TGG + chr2_1:52716838-52716857 None:intergenic 30.0%
AATTTCCAATTCTCAACACT+AGG + chr2_1:52716862-52716881 None:intergenic 30.0%
! TTGAAAACCTCTCTTTTTCT+GGG + chr2_1:52717028-52717047 None:intergenic 30.0%
! ATTGAAAACCTCTCTTTTTC+TGG + chr2_1:52717029-52717048 None:intergenic 30.0%
TCATTTATAAGATCCTCCAA+AGG + chr2_1:52717092-52717111 None:intergenic 30.0%
GGTTTGTAAATCAACGTATG+TGG + chr2_1:52713196-52713215 None:intergenic 35.0%
AAATTTGGTCTGTGTTCTTC+GGG + chr2_1:52713266-52713285 None:intergenic 35.0%
GAAATTTGGTCTGTGTTCTT+CGG + chr2_1:52713267-52713286 None:intergenic 35.0%
!!! ACTAGGTTTTGAATAGCAGA+TGG + chr2_1:52713356-52713375 None:intergenic 35.0%
TGCTATTCAAAACCTAGTGA+AGG - chr2_1:52713358-52713377 Msa0211440:exon 35.0%
AGTCTCTGTCTAATACTCAA+AGG + chr2_1:52713440-52713459 None:intergenic 35.0%
TCACCAAGAATATCAAAGAC+TGG - chr2_1:52713558-52713577 Msa0211440:CDS 35.0%
! ATGATGATCGACTTACTCAA+TGG - chr2_1:52713642-52713661 Msa0211440:intron 35.0%
GATCGTTCATAGTCTCAATT+TGG - chr2_1:52713738-52713757 Msa0211440:intron 35.0%
!! AGTCTCAATTTGGTTTGGAT+CGG - chr2_1:52713748-52713767 Msa0211440:intron 35.0%
TGGTTCCGAATAATTTGGTT+TGG - chr2_1:52713837-52713856 Msa0211440:intron 35.0%
CCGATCCAAACCAAATTATT+CGG + chr2_1:52713845-52713864 None:intergenic 35.0%
!! CCGAATAATTTGGTTTGGAT+CGG - chr2_1:52713842-52713861 Msa0211440:intron 35.0%
! GAGAATGAATTTTCAGCCTT+TGG - chr2_1:52714616-52714635 Msa0211440:intron 35.0%
GCCTTTGGATTCACATTTAA+TGG - chr2_1:52714631-52714650 Msa0211440:intron 35.0%
GCCATTAAATGTGAATCCAA+AGG + chr2_1:52714635-52714654 None:intergenic 35.0%
GTGAACGTGGTTATAAGAAA+TGG + chr2_1:52714697-52714716 None:intergenic 35.0%
GAAGCTTGAATTTGAACTTG+AGG + chr2_1:52714967-52714986 None:intergenic 35.0%
TCACCACTAACACTCTATAA+TGG - chr2_1:52714985-52715004 Msa0211440:intron 35.0%
!! GAACTTATAGCTTTGAGCTT+AGG - chr2_1:52715118-52715137 Msa0211440:intron 35.0%
GTTGGCACCATAAATATTCT+TGG - chr2_1:52715259-52715278 Msa0211440:CDS 35.0%
AAATATTCTTGGCCAAGATG+AGG - chr2_1:52715270-52715289 Msa0211440:CDS 35.0%
! ACAATGTAAGCATTTGGGAT+TGG + chr2_1:52715349-52715368 None:intergenic 35.0%
! TAACATTGGTGATCTCATTC+AGG - chr2_1:52715369-52715388 Msa0211440:CDS 35.0%
TGATCTCATTCAGGTACTTA+TGG - chr2_1:52715378-52715397 Msa0211440:CDS 35.0%
GATCTCATTCAGGTACTTAT+GGG - chr2_1:52715379-52715398 Msa0211440:CDS 35.0%
ATCTCATTCAGGTACTTATG+GGG - chr2_1:52715380-52715399 Msa0211440:CDS 35.0%
TAGAGTTAGAGGTTTGTAGA+CGG + chr2_1:52715528-52715547 None:intergenic 35.0%
!! GGTTCAATCTTTAGAGTTAG+AGG + chr2_1:52715539-52715558 None:intergenic 35.0%
!!! TGTTTTCTAAGACGTGTACT+CGG + chr2_1:52715692-52715711 None:intergenic 35.0%
AGTACACGTCTTAGAAAACA+TGG - chr2_1:52715692-52715711 Msa0211440:intron 35.0%
TGTACTCGGGTATTATAAGT+GGG + chr2_1:52715757-52715776 None:intergenic 35.0%
!!! TGTTTTCTAAGACGTGTACT+CGG + chr2_1:52715692-52715711 None:intergenic 35.0%
AGTACACGTCTTAGAAAACA+TGG - chr2_1:52715692-52715711 Msa0211440:intron 35.0%
AAAGTGAAGTTCACTTCTCA+AGG + chr2_1:52716171-52716190 None:intergenic 35.0%
TCATTAAAGTGATAAGCCAC+TGG - chr2_1:52716190-52716209 Msa0211440:intron 35.0%
GTAATACTAGTAGTTATGCC+TGG + chr2_1:52716241-52716260 None:intergenic 35.0%
!!! ACTACTAGTTTTTGAAGAGG+TGG - chr2_1:52716259-52716278 Msa0211440:intron 35.0%
ACAATTTCCCTCTCCAATAA+AGG - chr2_1:52716630-52716649 Msa0211440:intron 35.0%
! AATGTTTAAGACTCTCCCAT+TGG - chr2_1:52716676-52716695 Msa0211440:intron 35.0%
TAGACTATCTCCAATCCAAT+GGG + chr2_1:52716694-52716713 None:intergenic 35.0%
TTAGACTATCTCCAATCCAA+TGG + chr2_1:52716695-52716714 None:intergenic 35.0%
TGTTGAGAATTGGAAATTGC+AGG - chr2_1:52716864-52716883 Msa0211440:intron 35.0%
! GAGAGGTTTTCAATTACCTT+TGG - chr2_1:52717035-52717054 Msa0211440:CDS 35.0%
TTACATTGGTGTAGTGTGAT+GGG + chr2_1:52717067-52717086 None:intergenic 35.0%
TTTACATTGGTGTAGTGTGA+TGG + chr2_1:52717068-52717087 None:intergenic 35.0%
CCATGGTTGTTCTAATGCTA+GGG + chr2_1:52713217-52713236 None:intergenic 40.0%
CCTAGCATTAGAACAACCAT+GGG - chr2_1:52713215-52713234 Msa0211440:three_prime_UTR 40.0%
! GCTTCTGTGATGGAGAAATT+TGG + chr2_1:52713281-52713300 None:intergenic 40.0%
TATTGGGGAGAGGTCAATTA+CGG + chr2_1:52713315-52713334 None:intergenic 40.0%
! TGCTGGTTGTTGGAATATTG+GGG + chr2_1:52713330-52713349 None:intergenic 40.0%
! CTGCTGGTTGTTGGAATATT+GGG + chr2_1:52713331-52713350 None:intergenic 40.0%
! TCTGCTGGTTGTTGGAATAT+TGG + chr2_1:52713332-52713351 None:intergenic 40.0%
AACCTAGTGAAGGAAATTGC+AGG - chr2_1:52713368-52713387 Msa0211440:CDS 40.0%
TTCTTGCAAGTCACAAACCA+TGG - chr2_1:52713410-52713429 Msa0211440:CDS 40.0%
TCTTGCAAGTCACAAACCAT+GGG - chr2_1:52713411-52713430 Msa0211440:CDS 40.0%
!! TAATACTCAAAGGTACCCCA+TGG + chr2_1:52713430-52713449 None:intergenic 40.0%
GTTCTTTGCTCAAAGTATGG+AGG - chr2_1:52713478-52713497 Msa0211440:CDS 40.0%
AGAGATGATATCAGTCCAAG+TGG - chr2_1:52713518-52713537 Msa0211440:CDS 40.0%
AGTCCAAGTGGTTATCATGA+TGG - chr2_1:52713530-52713549 Msa0211440:CDS 40.0%
TCTCCATCATGATAACCACT+TGG + chr2_1:52713536-52713555 None:intergenic 40.0%
! AAGTGGTTATCATGATGGAG+AGG - chr2_1:52713535-52713554 Msa0211440:CDS 40.0%
TCATGTTCATCATCAGTGAG+AGG + chr2_1:52713626-52713645 None:intergenic 40.0%
TTTGGAGGATATAGAAGGGT+TGG + chr2_1:52713674-52713693 None:intergenic 40.0%
TCTAGTCACACTTACGAACA+AGG - chr2_1:52714148-52714167 Msa0211440:intron 40.0%
CTAGTCACACTTACGAACAA+GGG - chr2_1:52714149-52714168 Msa0211440:intron 40.0%
CGTGGTTATAAGAAATGGAG+AGG + chr2_1:52714692-52714711 None:intergenic 40.0%
ATGAAAAGGTAGCAGGTATG+TGG + chr2_1:52714731-52714750 None:intergenic 40.0%
GCACGAGTATATTGAAGAGA+TGG - chr2_1:52715072-52715091 Msa0211440:intron 40.0%
AAAGTTGGCACATAAACTGC+TGG - chr2_1:52715096-52715115 Msa0211440:intron 40.0%
GTTCATGCAAAACCAGTTCA+TGG - chr2_1:52715609-52715628 Msa0211440:intron 40.0%
GTTTATAAGAACCAGTTCGC+CGG - chr2_1:52715633-52715652 Msa0211440:intron 40.0%
!!! GTTTTCTAAGACGTGTACTC+GGG + chr2_1:52715691-52715710 None:intergenic 40.0%
TACTCGGGTATTATAAGTGG+GGG + chr2_1:52715755-52715774 None:intergenic 40.0%
GTACTCGGGTATTATAAGTG+GGG + chr2_1:52715756-52715775 None:intergenic 40.0%
GTGTACTCGGGTATTATAAG+TGG + chr2_1:52715758-52715777 None:intergenic 40.0%
!!! GTTTTCTAAGACGTGTACTC+GGG + chr2_1:52715691-52715710 None:intergenic 40.0%
TAGGACATGACGTCATAAGT+GGG + chr2_1:52715836-52715855 None:intergenic 40.0%
ATAGGACATGACGTCATAAG+TGG + chr2_1:52715837-52715856 None:intergenic 40.0%
! TTAGGCTTGGTAGCACTATT+AGG - chr2_1:52715899-52715918 Msa0211440:intron 40.0%
TGTTGTTAAGAGTCCCACAT+CGG + chr2_1:52716099-52716118 None:intergenic 40.0%
ATGTGGGACTCTTAACAACA+CGG - chr2_1:52716099-52716118 Msa0211440:intron 40.0%
ATGTGTATGAGATGTTGGGT+TGG + chr2_1:52716478-52716497 None:intergenic 40.0%
ATTGGAGAGGGAAATTGTTG+AGG + chr2_1:52716628-52716647 None:intergenic 40.0%
TTAAGACTCTCCCATTGGAT+TGG - chr2_1:52716681-52716700 Msa0211440:intron 40.0%
ATAGTCTAAGTGCCAGATGT+GGG - chr2_1:52716706-52716725 Msa0211440:intron 40.0%
CAATTCTCAACACTAGGTGT+TGG + chr2_1:52716856-52716875 None:intergenic 40.0%
! CAACACCTAGTGTTGAGAAT+TGG - chr2_1:52716854-52716873 Msa0211440:intron 40.0%
GAGAATTGGAAATTGCAGGT+TGG - chr2_1:52716868-52716887 Msa0211440:intron 40.0%
!!! GCAAACTGTTTTGTTTGTGC+AGG - chr2_1:52716953-52716972 Msa0211440:CDS 40.0%
!!! CTGTTTTGTTTGTGCAGGTT+TGG - chr2_1:52716958-52716977 Msa0211440:CDS 40.0%
CAATGATGCTTATGAGAGTG+TGG - chr2_1:52716983-52717002 Msa0211440:CDS 40.0%
CTACACCAATGTAAAGCCTT+TGG - chr2_1:52717073-52717092 Msa0211440:CDS 40.0%
ATCCTCCAAAGGCTTTACAT+TGG + chr2_1:52717081-52717100 None:intergenic 40.0%
ACGAGTGACTACAACTGAAT+TGG - chr2_1:52717277-52717296 Msa0211440:CDS 40.0%
CCCTAGCATTAGAACAACCA+TGG - chr2_1:52713214-52713233 Msa0211440:three_prime_UTR 45.0%
CCCATGGTTGTTCTAATGCT+AGG + chr2_1:52713218-52713237 None:intergenic 45.0%
TAGAACAACCATGGGAGAAG+TGG - chr2_1:52713223-52713242 Msa0211440:three_prime_UTR 45.0%
TTCTCCATCACAGAAGCCAA+AGG - chr2_1:52713284-52713303 Msa0211440:three_prime_UTR 45.0%
! AACTCCTTTGGCTTCTGTGA+TGG + chr2_1:52713291-52713310 None:intergenic 45.0%
GTCAATTACGGGAACTCCTT+TGG + chr2_1:52713303-52713322 None:intergenic 45.0%
ATTGGGGAGAGGTCAATTAC+GGG + chr2_1:52713314-52713333 None:intergenic 45.0%
GTTGTTGGAATATTGGGGAG+AGG + chr2_1:52713325-52713344 None:intergenic 45.0%
TGAATAGCAGATGGATCTGC+TGG + chr2_1:52713347-52713366 None:intergenic 45.0%
CACCTGCAATTTCCTTCACT+AGG + chr2_1:52713373-52713392 None:intergenic 45.0%
CTTGCAAGTCACAAACCATG+GGG - chr2_1:52713412-52713431 Msa0211440:CDS 45.0%
CTCAAAGTATGGAGGAGAAG+AGG - chr2_1:52713486-52713505 Msa0211440:CDS 45.0%
AAGTATGGAGGAGAAGAGGA+AGG - chr2_1:52713490-52713509 Msa0211440:CDS 45.0%
ATCATCAGTGAGAGGAACCA+CGG + chr2_1:52713618-52713637 None:intergenic 45.0%
GTTCGTAAGTGTGACTAGAG+TGG + chr2_1:52714147-52714166 None:intergenic 45.0%
! ACTTACGAACAAGGGTGTAG+TGG - chr2_1:52714157-52714176 Msa0211440:intron 45.0%
! CTTACGAACAAGGGTGTAGT+GGG - chr2_1:52714158-52714177 Msa0211440:intron 45.0%
CAGGTATGTGGAAGAAGATG+GGG + chr2_1:52714719-52714738 None:intergenic 45.0%
GCAGGTATGTGGAAGAAGAT+GGG + chr2_1:52714720-52714739 None:intergenic 45.0%
AGCAGGTATGTGGAAGAAGA+TGG + chr2_1:52714721-52714740 None:intergenic 45.0%
GTTGGAAGTCACAAGGATGT+TGG - chr2_1:52715241-52715260 Msa0211440:CDS 45.0%
! GTTTTGCATGAACCAGTTCG+AGG + chr2_1:52715602-52715621 None:intergenic 45.0%
CATTCATATTTCCGGCGAAC+TGG + chr2_1:52715647-52715666 None:intergenic 45.0%
CCTCACAAGTCAGTTGTGTT+AGG + chr2_1:52715723-52715742 None:intergenic 45.0%
!! CCTAACACAACTGACTTGTG+AGG - chr2_1:52715720-52715739 Msa0211440:intron 45.0%
CCTCACAAGTCAGTTGTGTT+AGG + chr2_1:52715723-52715742 None:intergenic 45.0%
!! CCTAACACAACTGACTTGTG+AGG - chr2_1:52715720-52715739 Msa0211440:intron 45.0%
AGGACATGACGTCATAAGTG+GGG + chr2_1:52715835-52715854 None:intergenic 45.0%
! CTTGGTAGCACTATTAGGCT+TGG - chr2_1:52715904-52715923 Msa0211440:intron 45.0%
! GCTTGGTTCGTGGACATAAA+TGG - chr2_1:52715921-52715940 Msa0211440:intron 45.0%
TGGTTCGTGGACATAAATGG+TGG - chr2_1:52715924-52715943 Msa0211440:intron 45.0%
GGTTCGTGGACATAAATGGT+GGG - chr2_1:52715925-52715944 Msa0211440:intron 45.0%
TGCTATCAGGTTTCCGCTAT+CGG + chr2_1:52715955-52715974 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+CGG - chr2_1:52716018-52716037 Msa0211440:intron 45.0%
AAGTCATGTCCTATCCGATG+TGG - chr2_1:52716082-52716101 Msa0211440:intron 45.0%
AGTCATGTCCTATCCGATGT+GGG - chr2_1:52716083-52716102 Msa0211440:intron 45.0%
TTAAGAGTCCCACATCGGAT+AGG + chr2_1:52716094-52716113 None:intergenic 45.0%
GATAGTCTAAGTGCCAGATG+TGG - chr2_1:52716705-52716724 Msa0211440:intron 45.0%
GTAAAGAGAAGTCCCACATC+TGG + chr2_1:52716721-52716740 None:intergenic 45.0%
TCGTCAACCCAGAAAAAGAG+AGG - chr2_1:52717018-52717037 Msa0211440:CDS 45.0%
!! GTGTGATGGGTACAAACCAA+AGG + chr2_1:52717054-52717073 None:intergenic 45.0%
CACCAATGTAAAGCCTTTGG+AGG - chr2_1:52717076-52717095 Msa0211440:CDS 45.0%
AGATGCTTGCCCCAATTGAA+AGG + chr2_1:52717137-52717156 None:intergenic 45.0%
!!! AAATAAAAAAATTAGTTTTT+GGG + chr2_1:52714206-52714225 None:intergenic 5.0%
!!! TTTTATTTTATTTTATTGAA+GGG + chr2_1:52717368-52717387 None:intergenic 5.0%
!!! ATTTTATTTTATTTTATTGA+AGG + chr2_1:52717369-52717388 None:intergenic 5.0%
AGATGAGTCCACTTCTCCCA+TGG + chr2_1:52713234-52713253 None:intergenic 50.0%
! CAGATGGATCTGCTGGTTGT+TGG + chr2_1:52713340-52713359 None:intergenic 50.0%
GGAAATTGCAGGTGCATGCA+AGG - chr2_1:52713379-52713398 Msa0211440:CDS 50.0%
ATGGAGGAGAAGAGGAAGGT+TGG - chr2_1:52713494-52713513 Msa0211440:CDS 50.0%
TCTTTGCAGAGATCCTACCG+TGG - chr2_1:52713598-52713617 Msa0211440:CDS 50.0%
!! GAACAAGGGTGTAGTGGGTA+AGG - chr2_1:52714163-52714182 Msa0211440:intron 50.0%
!! AAGGGTGTAGTGGGTAAGGA+TGG - chr2_1:52714167-52714186 Msa0211440:intron 50.0%
!! AGGGTGTAGTGGGTAAGGAT+GGG - chr2_1:52714168-52714187 Msa0211440:intron 50.0%
! TCTTGGCGTTGGAAGTCACA+AGG - chr2_1:52715234-52715253 Msa0211440:CDS 50.0%
CAAGACCTGCAACCTCATCT+TGG + chr2_1:52715285-52715304 None:intergenic 50.0%
! GAACCAGTTCGAGGCTTGTT+GGG + chr2_1:52715593-52715612 None:intergenic 50.0%
TGAACCAGTTCGAGGCTTGT+TGG + chr2_1:52715594-52715613 None:intergenic 50.0%
!! CACAACTGACTTGTGAGGTG+AGG - chr2_1:52715725-52715744 Msa0211440:intron 50.0%
!! CACAACTGACTTGTGAGGTG+AGG - chr2_1:52715725-52715744 Msa0211440:intron 50.0%
GGACATGACGTCATAAGTGG+GGG + chr2_1:52715834-52715853 None:intergenic 50.0%
TTAAGAGTCCCACGTCGGAT+AGG + chr2_1:52715855-52715874 None:intergenic 50.0%
GTGTGTTAAGAGTCCCACGT+CGG + chr2_1:52715860-52715879 None:intergenic 50.0%
!! TAATAGTGCTGGTCGTGAGG+GGG + chr2_1:52715882-52715901 None:intergenic 50.0%
!! CTAATAGTGCTGGTCGTGAG+GGG + chr2_1:52715883-52715902 None:intergenic 50.0%
!! CCTAATAGTGCTGGTCGTGA+GGG + chr2_1:52715884-52715903 None:intergenic 50.0%
ACGACCAGCACTATTAGGCT+TGG - chr2_1:52715886-52715905 Msa0211440:intron 50.0%
GCTACCAAGCCTAATAGTGC+TGG + chr2_1:52715893-52715912 None:intergenic 50.0%
! GCACTATTAGGCTTGGTTCG+TGG - chr2_1:52715911-52715930 Msa0211440:intron 50.0%
GCTATCAGGTTTCCGCTATC+GGG + chr2_1:52715954-52715973 None:intergenic 50.0%
TGTGTTAGGCCCAACCACTT+GGG + chr2_1:52716006-52716025 None:intergenic 50.0%
TTGTGTTAGGCCCAACCACT+TGG + chr2_1:52716007-52716026 None:intergenic 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG + chr2_1:52716020-52716039 None:intergenic 50.0%
!! ACCTCACAAGCCGGTTTTGT+GGG + chr2_1:52716031-52716050 None:intergenic 50.0%
GTTATCCTCACCTCACAAGC+CGG + chr2_1:52716040-52716059 None:intergenic 50.0%
TTATGCCTGGCATGTTGTGC+TGG + chr2_1:52716228-52716247 None:intergenic 50.0%
TTGCAGGTGCATGCAAGGAG+TGG - chr2_1:52713384-52713403 Msa0211440:CDS 55.0%
TGCAGGTGCATGCAAGGAGT+GGG - chr2_1:52713385-52713404 Msa0211440:CDS 55.0%
TCAGTGAGAGGAACCACGGT+AGG + chr2_1:52713614-52713633 None:intergenic 55.0%
!! GGGTGTAGTGGGTAAGGATG+GGG - chr2_1:52714169-52714188 Msa0211440:intron 55.0%
TGGGTAAGGATGGGGTAGCT+TGG - chr2_1:52714177-52714196 Msa0211440:intron 55.0%
GGAAGAAGATGGGGTGAACG+TGG + chr2_1:52714710-52714729 None:intergenic 55.0%
CTTCGTCGCTGCTTACGACA+AGG - chr2_1:52714842-52714861 Msa0211440:intron 55.0%
CAAGAGCTAGGTGAGGGGAA+GGG + chr2_1:52715219-52715238 None:intergenic 55.0%
AACGCCAAGAGCTAGGTGAG+GGG + chr2_1:52715224-52715243 None:intergenic 55.0%
CAACGCCAAGAGCTAGGTGA+GGG + chr2_1:52715225-52715244 None:intergenic 55.0%
GACTTCCAACGCCAAGAGCT+AGG + chr2_1:52715231-52715250 None:intergenic 55.0%
CTTGGCCAAGATGAGGTTGC+AGG - chr2_1:52715277-52715296 Msa0211440:CDS 55.0%
GAACCCAACAAGCCTCGAAC+TGG - chr2_1:52715587-52715606 Msa0211440:intron 55.0%
ACGTCATGTCCTATCCGACG+TGG - chr2_1:52715843-52715862 Msa0211440:intron 55.0%
CGTCATGTCCTATCCGACGT+GGG - chr2_1:52715844-52715863 Msa0211440:intron 55.0%
CCCTCACGACCAGCACTATT+AGG - chr2_1:52715881-52715900 Msa0211440:intron 55.0%
!! GCCTAATAGTGCTGGTCGTG+AGG + chr2_1:52715885-52715904 None:intergenic 55.0%
!! AATGGTGGGTGACCCGATAG+CGG - chr2_1:52715939-52715958 Msa0211440:intron 55.0%
AGCGGAAACCTGATAGCACG+TGG - chr2_1:52715957-52715976 Msa0211440:intron 55.0%
CCACGTAGGTCCAACCACTT+GGG + chr2_1:52715983-52716002 None:intergenic 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG + chr2_1:52716030-52716049 None:intergenic 55.0%
!! CACCTCACAAGCCGGTTTTG+TGG + chr2_1:52716032-52716051 None:intergenic 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG - chr2_1:52716032-52716051 Msa0211440:intron 55.0%
! ATGTTGTGCTGGTCCCTGGT+GGG + chr2_1:52716217-52716236 None:intergenic 55.0%
GCAGGTGCATGCAAGGAGTG+GGG - chr2_1:52713386-52713405 Msa0211440:CDS 60.0%
!! AGGTGAGGGGAAGGGCATTG+AGG + chr2_1:52715211-52715230 None:intergenic 60.0%
CCAAGAGCTAGGTGAGGGGA+AGG + chr2_1:52715220-52715239 None:intergenic 60.0%
! CCTTCCCCTCACCTAGCTCT+TGG - chr2_1:52715217-52715236 Msa0211440:CDS 60.0%
CCAACGCCAAGAGCTAGGTG+AGG + chr2_1:52715226-52715245 None:intergenic 60.0%
! CCTCACCTAGCTCTTGGCGT+TGG - chr2_1:52715223-52715242 Msa0211440:CDS 60.0%
CACTTGGGCCACGTGCTATC+AGG + chr2_1:52715968-52715987 None:intergenic 60.0%
CTGATAGCACGTGGCCCAAG+TGG - chr2_1:52715966-52715985 Msa0211440:intron 60.0%
TAGCACGTGGCCCAAGTGGT+TGG - chr2_1:52715970-52715989 Msa0211440:intron 60.0%
CCCAAGTGGTTGGACCTACG+TGG - chr2_1:52715980-52715999 Msa0211440:intron 60.0%
GCCACGTAGGTCCAACCACT+TGG + chr2_1:52715984-52716003 None:intergenic 60.0%
TTGGACCTACGTGGCCCAAG+TGG - chr2_1:52715989-52716008 Msa0211440:intron 60.0%
ACCTACGTGGCCCAAGTGGT+TGG - chr2_1:52715993-52716012 Msa0211440:intron 60.0%
CCTACGTGGCCCAAGTGGTT+GGG - chr2_1:52715994-52716013 Msa0211440:intron 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG - chr2_1:52716027-52716046 Msa0211440:intron 60.0%
ATAAGCCACTGGCCCCACCA+GGG - chr2_1:52716201-52716220 Msa0211440:intron 60.0%
! TGTTGTGCTGGTCCCTGGTG+GGG + chr2_1:52716216-52716235 None:intergenic 60.0%
! CATGTTGTGCTGGTCCCTGG+TGG + chr2_1:52716218-52716237 None:intergenic 60.0%
! TGGCATGTTGTGCTGGTCCC+TGG + chr2_1:52716221-52716240 None:intergenic 60.0%
AGGGACCAGCACAACATGCC+AGG - chr2_1:52716220-52716239 Msa0211440:intron 60.0%
CCCAACCACTTGGGCCACGT+AGG + chr2_1:52715997-52716016 None:intergenic 65.0%
GATAAGCCACTGGCCCCACC+AGG - chr2_1:52716200-52716219 Msa0211440:intron 65.0%
CTGGTCCCTGGTGGGGCCAG+TGG + chr2_1:52716209-52716228 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 52713192 52717407 52713192 ID=Msa0211440;Name=Msa0211440
chr2_1 mRNA 52713192 52717407 52713192 ID=Msa0211440-mRNA-1;Parent=Msa0211440;Name=Msa0211440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=41|1|1|1|1|1|3|175|350
chr2_1 exon 52713192 52713624 52713192 ID=Msa0211440-mRNA-1:exon:14681;Parent=Msa0211440-mRNA-1
chr2_1 exon 52715209 52715536 52715209 ID=Msa0211440-mRNA-1:exon:14680;Parent=Msa0211440-mRNA-1
chr2_1 exon 52716900 52717407 52716900 ID=Msa0211440-mRNA-1:exon:14679;Parent=Msa0211440-mRNA-1
chr2_1 five_prime_UTR 52717367 52717407 52717367 ID=Msa0211440-mRNA-1:five_prime_utr;Parent=Msa0211440-mRNA-1
chr2_1 CDS 52716900 52717366 52716900 ID=Msa0211440-mRNA-1:cds;Parent=Msa0211440-mRNA-1
chr2_1 CDS 52715209 52715536 52715209 ID=Msa0211440-mRNA-1:cds;Parent=Msa0211440-mRNA-1
chr2_1 CDS 52713367 52713624 52713367 ID=Msa0211440-mRNA-1:cds;Parent=Msa0211440-mRNA-1
chr2_1 three_prime_UTR 52713192 52713366 52713192 ID=Msa0211440-mRNA-1:three_prime_utr;Parent=Msa0211440-mRNA-1
Gene Sequence

>Msa0211440

ATGGGAGAAGTGGACTCATCTTTTGTTCAACCCGAAGAACACAGACCAAATTTCTCCATCACAGAAGCCAAAGGAGTTCCCGTAATTGACCTCTCCCCAATATTCCAACAACCAGCAGATCCATCTGCTATTCAAAACCTAGTGAAGGAAATTGCAGGTGCATGCAAGGAGTGGGGATTCTTGCAAGTCACAAACCATGGGGTACCTTTGAGTATTAGACAGAGACTCGACGAAGCGTCTAAATTGTTCTTTGCTCAAAGTATGGAGGAGAAGAGGAAGGTTGGCAGAGATGATATCAGTCCAAGTGGTTATCATGATGGAGAGGTCACCAAGAATATCAAAGACTGGAAAGAATGCTTTGATTTTCTTTGCAGAGATCCTACCGTGGTTCCTCTCACTGATGATGAACATGATGATCGACTTACTCAATGGACTAATCCAACCCTTCTATATCCTCCAAATTTTAGGGTGATAATGCACGAGTATATTGAAGAGATGGAAAAGTTGGCACATAAACTGCTGGAACTTATAGCTTTGAGCTTAGGACTTAAAGCAGAAAGTTTTGAAGAATTTTTCAAGGATCAAACTAATTTTTTAAAACTCAATCACTATCCTCAATGCCCTTCCCCTCACCTAGCTCTTGGCGTTGGAAGTCACAAGGATGTTGGCACCATAAATATTCTTGGCCAAGATGAGGTTGCAGGTCTTGAAGTGAAGCGTAAAATAGATCAAGAATGGGTTCTTGTGAAACCAATCCCAAATGCTTACATTGTTAACATTGGTGATCTCATTCAGGTTTGGAGCAATGATGCTTATGAGAGTGTGGAACACAGAGTTATCGTCAACCCAGAAAAAGAGAGGTTTTCAATTACCTTTGGTTTGTACCCATCACACTACACCAATGTAAAGCCTTTGGAGGATCTTATAAATGAAGAGAACCCTTCAAAATATAGACCTTTCAATTGGGGCAAGCATCTTGTCAATAGAAAGAACAGTATTTTCAAGAAGAAAAATGTGGGGAACCTCCAAATTTATCACTATAAGATAGCATAA
Protein sequence

>Msa0211440

MGEVDSSFVQPEEHRPNFSITEAKGVPVIDLSPIFQQPADPSAIQNLVKEIAGACKEWGFLQVTNHGVPLSIRQRLDEASKLFFAQSMEEKRKVGRDDISPSGYHDGEVTKNIKDWKECFDFLCRDPTVVPLTDDEHDDRLTQWTNPTLLYPPNFRVIMHEYIEEMEKLAHKLLELIALSLGLKAESFEEFFKDQTNFLKLNHYPQCPSPHLALGVGSHKDVGTINILGQDEVAGLEVKRKIDQEWVLVKPIPNAYIVNIGDLIQVWSNDAYESVEHRVIVNPEKERFSITFGLYPSHYTNVKPLEDLINEENPSKYRPFNWGKHLVNRKNSIFKKKNVGNLQIYHYKIA*