AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212190 MtrunA17_Chr2g0311521 88.716 257 27 2 1 256 1 256 1.33e-160 473
Msa0212190 MtrunA17_Chr2g0311551 80.545 257 45 4 1 256 1 253 6.37e-136 408
Msa0212190 MtrunA17_Chr1g0156711 52.290 262 114 5 7 263 7 262 1.06e-92 276
Msa0212190 MtrunA17_Chr3g0142781 53.629 248 108 4 8 252 11 254 5.41e-90 270
Msa0212190 MtrunA17_Chr2g0311561 56.223 233 98 2 23 254 10 239 2.91e-89 266
Msa0212190 MtrunA17_Chr8g0352471 53.219 233 105 2 19 250 21 250 2.27e-87 263
Msa0212190 MtrunA17_Chr2g0311531 55.686 255 78 8 21 269 24 249 1.16e-83 251
Msa0212190 MtrunA17_Chr8g0371781 51.020 245 109 3 23 260 27 267 3.48e-83 251
Msa0212190 MtrunA17_Chr8g0357311 51.709 234 108 3 22 253 24 254 4.94e-83 249
Msa0212190 MtrunA17_Chr4g0037351 50.199 251 118 3 1 247 1 248 1.55e-81 248
Msa0212190 MtrunA17_Chr5g0405581 48.387 248 118 5 5 247 9 251 1.30e-78 240
Msa0212190 MtrunA17_Chr5g0428801 46.667 255 127 4 2 251 4 254 5.16e-78 239
Msa0212190 MtrunA17_Chr1g0154591 51.037 241 105 7 9 247 3 232 2.36e-77 234
Msa0212190 MtrunA17_Chr5g0405611 47.876 259 122 5 4 260 76 323 1.86e-75 234
Msa0212190 MtrunA17_Chr7g0265011 48.035 229 112 5 21 247 64 287 2.41e-74 228
Msa0212190 MtrunA17_Chr2g0312181 45.714 245 127 4 5 247 3 243 8.71e-74 225
Msa0212190 MtrunA17_Chr4g0037331 48.548 241 116 4 6 246 7 239 1.63e-73 228
Msa0212190 MtrunA17_Chr8g0351851 47.917 240 114 6 8 246 8 237 1.66e-73 224
Msa0212190 MtrunA17_Chr1g0180161 45.489 266 130 7 5 268 10 262 1.66e-72 223
Msa0212190 MtrunA17_Chr3g0141341 50.439 228 105 7 26 251 14 235 1.35e-71 219
Msa0212190 MtrunA17_Chr1g0180221 45.935 246 117 6 5 248 52 283 7.25e-71 219
Msa0212190 MtrunA17_Chr1g0179851 46.218 238 121 5 14 249 9 241 2.64e-70 216
Msa0212190 MtrunA17_Chr1g0180121 45.714 245 119 6 5 247 10 242 1.36e-69 215
Msa0212190 MtrunA17_Chr1g0180231 45.749 247 120 6 5 249 10 244 2.75e-69 214
Msa0212190 MtrunA17_Chr1g0179871 45.749 247 120 6 5 249 10 244 2.75e-69 214
Msa0212190 MtrunA17_Chr1g0179891 45.935 246 119 6 6 249 6 239 3.51e-69 214
Msa0212190 MtrunA17_Chr8g0371771 47.718 241 113 6 8 246 14 243 3.09e-68 213
Msa0212190 MtrunA17_Chr8g0392961 48.182 220 105 5 30 247 33 245 1.71e-65 204
Msa0212190 MtrunA17_Chr2g0311501 51.562 192 86 6 69 255 2 191 1.30e-63 198
Msa0212190 MtrunA17_Chr6g0482741 42.041 245 132 6 5 247 4 240 1.94e-63 199
Msa0212190 MtrunA17_Chr7g0239131 41.129 248 139 5 1 247 1 242 4.30e-63 198
Msa0212190 MtrunA17_Chr5g0424221 44.130 247 123 7 1 246 7 239 5.51e-61 194
Msa0212190 MtrunA17_Chr3g0112091 38.843 242 141 5 8 247 1 237 3.94e-60 191
Msa0212190 MtrunA17_Chr6g0452331 40.226 266 146 8 1 258 3 263 1.24e-59 190
Msa0212190 MtrunA17_Chr4g0031221 40.249 241 130 9 13 246 18 251 1.44e-47 159
Msa0212190 MtrunA17_Chr5g0406771 43.011 186 93 4 5 187 1 176 1.50e-47 156
Msa0212190 MtrunA17_Chr5g0397821 40.708 226 110 7 23 247 23 225 4.55e-47 157
Msa0212190 MtrunA17_Chr5g0397831 36.220 254 135 7 1 247 3 236 4.31e-42 144
Msa0212190 MtrunA17_Chr8g0386341 39.442 251 123 10 1 247 23 248 4.53e-40 139
Msa0212190 MtrunA17_Chr2g0309611 30.120 249 157 7 5 245 10 249 3.17e-34 124
Msa0212190 MtrunA17_Chr1g0179911 28.682 258 163 6 1 252 1 243 6.23e-27 105
Msa0212190 MtrunA17_Chr8g0386351 31.837 245 93 10 5 247 46 218 1.25e-22 92.8
Msa0212190 MtrunA17_Chr1g0180181 43.119 109 58 4 163 268 12 119 9.54e-21 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212190 AT1G75800.1 50.388 258 119 4 1 253 1 254 1.02e-86 262
Msa0212190 AT1G20030.2 52.321 237 105 3 21 252 17 250 1.53e-84 256
Msa0212190 AT1G20030.1 52.119 236 105 3 22 252 1 233 6.26e-84 254
Msa0212190 AT2G17860.1 54.506 233 95 5 23 248 22 250 1.64e-81 246
Msa0212190 AT4G36010.1 52.743 237 102 4 21 250 20 253 1.48e-78 240
Msa0212190 AT4G36010.2 52.743 237 102 4 21 250 20 253 1.48e-78 240
Msa0212190 AT4G24180.6 49.200 250 112 5 5 248 17 257 1.32e-77 236
Msa0212190 AT4G24180.1 49.200 250 112 5 5 248 17 257 3.59e-77 237
Msa0212190 AT4G24180.5 48.400 250 109 6 5 248 17 252 1.89e-74 228
Msa0212190 AT4G24180.2 48.400 250 109 6 5 248 17 252 6.54e-74 228
Msa0212190 AT1G75050.1 49.593 246 112 7 7 250 11 246 8.37e-74 226
Msa0212190 AT4G38660.1 48.148 243 118 4 11 253 17 251 1.07e-73 229
Msa0212190 AT4G38670.3 46.939 245 123 4 7 247 6 247 6.98e-73 225
Msa0212190 AT4G38670.1 46.939 245 123 4 7 247 6 247 6.98e-73 225
Msa0212190 AT1G75040.1 46.964 247 123 4 1 247 1 239 2.30e-72 222
Msa0212190 AT4G38660.2 49.138 232 110 4 22 253 6 229 2.93e-72 224
Msa0212190 AT1G75030.1 49.180 244 110 8 7 247 11 243 6.50e-71 219
Msa0212190 AT4G38670.2 48.673 226 109 4 26 247 9 231 8.24e-71 219
Msa0212190 AT1G19320.1 47.154 246 119 5 6 246 7 246 1.12e-70 218
Msa0212190 AT5G38280.1 44.882 254 129 6 1 247 1 250 5.11e-70 228
Msa0212190 AT5G38280.2 44.882 254 129 6 1 247 1 250 1.06e-69 227
Msa0212190 AT5G24620.1 45.238 252 124 6 4 248 8 252 1.90e-69 220
Msa0212190 AT5G24620.4 45.238 252 124 6 4 248 63 307 6.62e-69 221
Msa0212190 AT5G24620.3 45.238 252 124 6 4 248 84 328 7.42e-69 221
Msa0212190 AT4G24180.3 48.291 234 106 5 5 232 17 241 1.36e-68 215
Msa0212190 AT1G73620.1 48.305 236 107 7 14 247 38 260 1.54e-67 211
Msa0212190 AT1G18250.1 46.610 236 111 7 14 247 17 239 3.22e-65 204
Msa0212190 AT4G24180.4 47.863 234 102 6 5 232 17 236 3.28e-65 206
Msa0212190 AT1G18250.2 47.598 229 109 7 23 247 19 240 1.89e-64 202
Msa0212190 AT1G77700.3 44.151 265 132 9 2 265 39 288 6.35e-63 201
Msa0212190 AT1G77700.2 44.223 251 126 8 2 251 39 276 1.52e-62 199
Msa0212190 AT1G77700.1 45.000 240 118 7 26 265 91 316 8.27e-61 196
Msa0212190 AT5G02140.2 39.331 239 140 3 10 247 7 241 3.58e-59 189
Msa0212190 AT5G02140.1 39.271 247 144 4 10 254 7 249 4.47e-59 190
Msa0212190 AT1G70250.1 40.400 250 130 7 22 262 143 382 1.78e-53 186
Msa0212190 AT2G28790.1 39.918 243 133 9 11 246 12 248 7.15e-52 170
Msa0212190 AT2G28790.2 39.918 243 133 9 11 246 37 273 7.22e-52 171
Msa0212190 AT5G40020.1 40.444 225 127 5 26 248 30 249 8.97e-51 167
Msa0212190 AT4G18253.1 35.458 251 151 4 1 250 1 241 9.01e-51 167
Msa0212190 AT4G11650.1 39.357 249 127 8 1 249 1 225 6.01e-47 157
Msa0212190 AT4G18250.1 37.600 250 146 4 1 249 34 274 2.86e-46 164
Msa0212190 AT4G36000.2 51.034 145 64 3 103 247 1 138 5.24e-46 154
Msa0212190 AT4G36000.1 51.034 145 64 3 103 247 1 138 5.24e-46 154
Msa0212190 AT5G24620.2 52.066 121 52 2 134 248 15 135 6.80e-36 130
Msa0212190 AT2G24810.1 50.649 77 38 0 170 246 116 192 1.99e-19 84.0

Find 94 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATGGACTGGTCATTTC+TGG 0.137238 2_1:-54114587 Msa0212190:CDS
TTATATCACAAAAGAAAATT+TGG 0.173764 2_1:-54114975 Msa0212190:five_prime_UTR
ACACTTGGCTCACAAGTATT+TGG 0.205169 2_1:+54114192 None:intergenic
GCACTAGTGGATTTCCTTCC+TGG 0.216731 2_1:+54113657 None:intergenic
TGCAAACTGTTTCTTGTTAT+CGG 0.235613 2_1:-54113966 Msa0212190:three_prime_UTR
GAGAAATTGTTAACCAAGTT+TGG 0.264385 2_1:-54113711 Msa0212190:three_prime_UTR
TGTTGCGTTGGGAATCATTC+AGG 0.295847 2_1:-54114216 Msa0212190:CDS
GCTATACAAATCTGTTATTC+TGG 0.307815 2_1:-54113874 Msa0212190:three_prime_UTR
AGTTAACAATTGCAACTATA+CGG 0.316482 2_1:-54114715 Msa0212190:CDS
TATTAGTTTGCACCCGCTTT+TGG 0.333176 2_1:-54113923 Msa0212190:three_prime_UTR
ATTGTTCCGTTAGGTGGTTC+CGG 0.360511 2_1:-54114369 Msa0212190:CDS
TGGTGCAACGTCACCTACTC+TGG 0.366068 2_1:-54113691 Msa0212190:three_prime_UTR
TGGGACGGTTGTGGCGTGCC+AGG 0.366640 2_1:-54114271 Msa0212190:CDS
CGTGCTGTTACATGACTTAC+CGG 0.371524 2_1:+54114350 None:intergenic
GCCATCACATGCTACTTTGC+CGG 0.403351 2_1:+54114500 None:intergenic
CCAGAAATGACCAGTCCATT+TGG 0.411350 2_1:+54114587 None:intergenic
CAAATGGACTGGTCATTTCT+GGG 0.415506 2_1:-54114586 Msa0212190:CDS
AGTGGATTTCCTTCCTGGCT+TGG 0.415945 2_1:+54113662 None:intergenic
ACAATTGCAACTATACGGTT+TGG 0.427382 2_1:-54114710 Msa0212190:CDS
ATCTAACCTGGCGTTATTTG+AGG 0.441014 2_1:+54114056 None:intergenic
CTGTTTACTGCGTTCTGTGT+TGG 0.441256 2_1:+54113819 None:intergenic
GACCAGCACGTTCACTTGTC+CGG 0.442150 2_1:-54114109 Msa0212190:CDS
GGGGATTGTGATCTGTTGTA+AGG 0.460682 2_1:+54113524 None:intergenic
CTGTAATTGTTGAATTCTCA+CGG 0.465536 2_1:+54114616 None:intergenic
CGGATCACCGCCTTTGACAC+TGG 0.471134 2_1:-54114472 Msa0212190:CDS
AACAAGAAACAGTTTGCAAA+TGG 0.482654 2_1:+54113971 None:intergenic
CCTAGGTTGAAGTCTAAGCT+AGG 0.486020 2_1:+54113577 None:intergenic
TGTGGAAGCTAAAATCGAAA+TGG 0.487823 2_1:+54114922 None:intergenic
GTCACGGGTGACTGTGGATC+CGG 0.488422 2_1:-54114519 Msa0212190:CDS
CCGATGGAAATTGTTCCGTT+AGG 0.488627 2_1:-54114378 Msa0212190:CDS
CAATTACAGCACCTGCCAAA+TGG 0.488705 2_1:-54114602 Msa0212190:CDS
ATCATCATACGCATAGCTAT+AGG 0.489323 2_1:+54114134 None:intergenic
TGAGATGGGATCTCAGATCT+AGG 0.489567 2_1:+54113550 None:intergenic
CATACTACTAGTGGAAATAG+TGG 0.491376 2_1:-54114678 Msa0212190:CDS
CTTCATCTATCAATAACTTC+AGG 0.492218 2_1:-54114864 Msa0212190:intron
GGTGCAACGTCACCTACTCT+GGG 0.493946 2_1:-54113690 Msa0212190:three_prime_UTR
AGGTGACGTTGCACCAAACT+TGG 0.494546 2_1:+54113698 None:intergenic
TTTGTTACTTTCAACTCCGT+TGG 0.499048 2_1:+54114297 None:intergenic
ACGCATAGCTATAGGCTTGA+GGG 0.502843 2_1:+54114142 None:intergenic
TAAAATCGAAATGGAGAAGA+AGG 0.505109 2_1:+54114931 None:intergenic
GACACTGGCGAAAATCTCTC+TGG 0.510712 2_1:-54114457 Msa0212190:CDS
TAACAGACAAGAAACAAAAG+AGG 0.514659 2_1:-54113738 Msa0212190:three_prime_UTR
ATGGAAATTGTTCCGTTAGG+TGG 0.518636 2_1:-54114375 Msa0212190:CDS
AACCTGGCGTTATTTGAGGC+AGG 0.519758 2_1:+54114060 None:intergenic
TAAAAGCAGCACAAGGTCCC+TGG 0.524370 2_1:+54114253 None:intergenic
TGTAATTGTTGAATTCTCAC+GGG 0.526386 2_1:+54114617 None:intergenic
CCACTAGTAGTATGTGAAGC+TGG 0.536657 2_1:+54114687 None:intergenic
TCTCAGATCTAGGAGTTCCT+AGG 0.542825 2_1:+54113560 None:intergenic
AAATGACCAGTCCATTTGGC+AGG 0.543212 2_1:+54114591 None:intergenic
GGGACGGTTGTGGCGTGCCA+GGG 0.544773 2_1:-54114270 Msa0212190:CDS
TCCTGTGTCACGGGTGACTG+TGG 0.545452 2_1:-54114525 Msa0212190:CDS
TCTAAGCTAGGGTAGGTCCT+AGG 0.553553 2_1:+54113589 None:intergenic
GTCCTGCCTCAAATAACGCC+AGG 0.556012 2_1:-54114062 Msa0212190:CDS
CCTAGCTTAGACTTCAACCT+AGG 0.564997 2_1:-54113577 Msa0212190:three_prime_UTR
ATAGATAAGTTAACCAAAAG+CGG 0.565123 2_1:+54113910 None:intergenic
CCAGCTTCACATACTACTAG+TGG 0.566702 2_1:-54114687 Msa0212190:CDS
TTGAATACGGACTGCACTAG+TGG 0.568865 2_1:+54113644 None:intergenic
CACGTTTGCACTTATGACCT+AGG 0.571659 2_1:-54113606 Msa0212190:three_prime_UTR
TAGATAAGTTAACCAAAAGC+GGG 0.577329 2_1:+54113911 None:intergenic
TACGCATAGCTATAGGCTTG+AGG 0.579746 2_1:+54114141 None:intergenic
ACAGCACCTGCCAAATGGAC+TGG 0.581412 2_1:-54114597 Msa0212190:CDS
GGGATTGTGATCTGTTGTAA+GGG 0.586400 2_1:+54113525 None:intergenic
GGACTGGTCATTTCTGGGGA+CGG 0.586901 2_1:-54114581 Msa0212190:CDS
CTGTTGTAAGGGAGTGAGAT+GGG 0.587980 2_1:+54113536 None:intergenic
TATGATGTCAGCTTAGTAGA+CGG 0.592433 2_1:-54114411 Msa0212190:CDS
TCCACAGTCACCCGTGACAC+AGG 0.592636 2_1:+54114524 None:intergenic
ATTAGTATTAGTATCTAACC+TGG 0.597518 2_1:+54114044 None:intergenic
CTAACGGAACAATTTCCATC+GGG 0.598873 2_1:+54114379 None:intergenic
ACAACGTGATAATCGGTGGC+CGG 0.599855 2_1:+54114090 None:intergenic
CTAGGTTGAAGTCTAAGCTA+GGG 0.601015 2_1:+54113578 None:intergenic
CCTAACGGAACAATTTCCAT+CGG 0.605818 2_1:+54114378 None:intergenic
GGCCGGACAAGTGAACGTGC+TGG 0.609375 2_1:+54114107 None:intergenic
CGGTAAGTCATGTAACAGCA+CGG 0.610003 2_1:-54114349 Msa0212190:CDS
TCCGGCAAAGTAGCATGTGA+TGG 0.612293 2_1:-54114501 Msa0212190:CDS
AATCGAAATGGAGAAGAAGG+TGG 0.612396 2_1:+54114934 None:intergenic
GGTAAGTCATGTAACAGCAC+GGG 0.618640 2_1:-54114348 Msa0212190:CDS
AATATCTTAGCATACACACT+TGG 0.620283 2_1:+54114177 None:intergenic
GACTTACCGGAACCACCTAA+CGG 0.626338 2_1:+54114363 None:intergenic
TCTGTTGTAAGGGAGTGAGA+TGG 0.629255 2_1:+54113535 None:intergenic
GTTGAAGTCTAAGCTAGGGT+AGG 0.635037 2_1:+54113582 None:intergenic
TTTGAACGCGGTATGTCCAA+CGG 0.637039 2_1:-54114313 Msa0212190:CDS
CTAGGTCATAAGTGCAAACG+TGG 0.640820 2_1:+54113607 None:intergenic
AATGCAACATTAGCAACCAC+CGG 0.645956 2_1:-54114654 Msa0212190:CDS
AAATGGACTGGTCATTTCTG+GGG 0.649772 2_1:-54114585 Msa0212190:CDS
TGCAACGTCACCTACTCTGG+GGG 0.654112 2_1:-54113688 Msa0212190:three_prime_UTR
GTGCAACGTCACCTACTCTG+GGG 0.656278 2_1:-54113689 Msa0212190:three_prime_UTR
TCAAAGGCGGTGATCCGCTG+CGG 0.664709 2_1:+54114478 None:intergenic
ATGACATTGGCTCAACCATG+TGG 0.665026 2_1:+54114904 None:intergenic
TGCAAATTAAAAGCAGCACA+AGG 0.673976 2_1:+54114246 None:intergenic
GTAGCATGTGATGGCCGCAG+CGG 0.682961 2_1:-54114492 Msa0212190:CDS
AGACGGTTATAATGTCCCGA+TGG 0.683696 2_1:-54114394 Msa0212190:CDS
GTAATTGTTGAATTCTCACG+GGG 0.688217 2_1:+54114618 None:intergenic
CATACCGCGTTCAAATCTGT+AGG 0.700053 2_1:+54114321 None:intergenic
TTGTCCTACAGATTTGAACG+CGG 0.778811 2_1:-54114325 Msa0212190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTTGTGATATAAAA+GGG + chr2_1:54113540-54113559 None:intergenic 15.0%
!!! ATTTTCTTTTGTGATATAAA+AGG + chr2_1:54113541-54113560 None:intergenic 15.0%
!! TTATATCACAAAAGAAAATT+TGG - chr2_1:54113542-54113561 Msa0212190:three_prime_UTR 15.0%
!!! TTTTCTTTTGTGATATAAAA+GGG + chr2_1:54113540-54113559 None:intergenic 15.0%
!!! ATTTTCTTTTGTGATATAAA+AGG + chr2_1:54113541-54113560 None:intergenic 15.0%
!! TTATATCACAAAAGAAAATT+TGG - chr2_1:54113542-54113561 Msa0212190:three_prime_UTR 15.0%
!! AGTTGAAAGTAACAAAAAAT+GGG - chr2_1:54114227-54114246 Msa0212190:CDS 20.0%
!! AGTTGAAAGTAACAAAAAAT+GGG - chr2_1:54114227-54114246 Msa0212190:CDS 20.0%
! AAGAAGAACAAAAATGACAT+TGG + chr2_1:54113629-54113648 None:intergenic 25.0%
!!! TCTTTTTTTCTATTTTGCAG+TGG - chr2_1:54113757-54113776 Msa0212190:three_prime_UTR 25.0%
! AGTTAACAATTGCAACTATA+CGG - chr2_1:54113802-54113821 Msa0212190:three_prime_UTR 25.0%
! GAGTTGAAAGTAACAAAAAA+TGG - chr2_1:54114226-54114245 Msa0212190:CDS 25.0%
! ACAAAAAACAACGTGATAAT+CGG + chr2_1:54114437-54114456 None:intergenic 25.0%
! ATTAGTATTAGTATCTAACC+TGG + chr2_1:54114476-54114495 None:intergenic 25.0%
! ATAGATAAGTTAACCAAAAG+CGG + chr2_1:54114610-54114629 None:intergenic 25.0%
! AAGAAGAACAAAAATGACAT+TGG + chr2_1:54113629-54113648 None:intergenic 25.0%
!!! TCTTTTTTTCTATTTTGCAG+TGG - chr2_1:54113757-54113776 Msa0212190:three_prime_UTR 25.0%
! AGTTAACAATTGCAACTATA+CGG - chr2_1:54113802-54113821 Msa0212190:three_prime_UTR 25.0%
! GAGTTGAAAGTAACAAAAAA+TGG - chr2_1:54114226-54114245 Msa0212190:CDS 25.0%
! ACAAAAAACAACGTGATAAT+CGG + chr2_1:54114437-54114456 None:intergenic 25.0%
! ATTAGTATTAGTATCTAACC+TGG + chr2_1:54114476-54114495 None:intergenic 25.0%
! ATAGATAAGTTAACCAAAAG+CGG + chr2_1:54114610-54114629 None:intergenic 25.0%
TAAAATCGAAATGGAGAAGA+AGG + chr2_1:54113589-54113608 None:intergenic 30.0%
CTTCATCTATCAATAACTTC+AGG - chr2_1:54113653-54113672 Msa0212190:three_prime_UTR 30.0%
TGTAATTGTTGAATTCTCAC+GGG + chr2_1:54113903-54113922 None:intergenic 30.0%
CTGTAATTGTTGAATTCTCA+CGG + chr2_1:54113904-54113923 None:intergenic 30.0%
GAAAGTAACAAAAAATGGGA+CGG - chr2_1:54114231-54114250 Msa0212190:CDS 30.0%
AATATCTTAGCATACACACT+TGG + chr2_1:54114343-54114362 None:intergenic 30.0%
AACAAGAAACAGTTTGCAAA+TGG + chr2_1:54114549-54114568 None:intergenic 30.0%
! TGCAAACTGTTTCTTGTTAT+CGG - chr2_1:54114551-54114570 Msa0212190:CDS 30.0%
TAGATAAGTTAACCAAAAGC+GGG + chr2_1:54114609-54114628 None:intergenic 30.0%
GCTATACAAATCTGTTATTC+TGG - chr2_1:54114643-54114662 Msa0212190:CDS 30.0%
TAACAGACAAGAAACAAAAG+AGG - chr2_1:54114779-54114798 Msa0212190:intron 30.0%
GAGAAATTGTTAACCAAGTT+TGG - chr2_1:54114806-54114825 Msa0212190:intron 30.0%
TAAAATCGAAATGGAGAAGA+AGG + chr2_1:54113589-54113608 None:intergenic 30.0%
CTTCATCTATCAATAACTTC+AGG - chr2_1:54113653-54113672 Msa0212190:three_prime_UTR 30.0%
TGTAATTGTTGAATTCTCAC+GGG + chr2_1:54113903-54113922 None:intergenic 30.0%
CTGTAATTGTTGAATTCTCA+CGG + chr2_1:54113904-54113923 None:intergenic 30.0%
GAAAGTAACAAAAAATGGGA+CGG - chr2_1:54114231-54114250 Msa0212190:CDS 30.0%
AATATCTTAGCATACACACT+TGG + chr2_1:54114343-54114362 None:intergenic 30.0%
AACAAGAAACAGTTTGCAAA+TGG + chr2_1:54114549-54114568 None:intergenic 30.0%
! TGCAAACTGTTTCTTGTTAT+CGG - chr2_1:54114551-54114570 Msa0212190:CDS 30.0%
TAGATAAGTTAACCAAAAGC+GGG + chr2_1:54114609-54114628 None:intergenic 30.0%
GCTATACAAATCTGTTATTC+TGG - chr2_1:54114643-54114662 Msa0212190:CDS 30.0%
TAACAGACAAGAAACAAAAG+AGG - chr2_1:54114779-54114798 Msa0212190:intron 30.0%
GAGAAATTGTTAACCAAGTT+TGG - chr2_1:54114806-54114825 Msa0212190:intron 30.0%
TGTGGAAGCTAAAATCGAAA+TGG + chr2_1:54113598-54113617 None:intergenic 35.0%
!!! TTTCGATTTTAGCTTCCACA+TGG - chr2_1:54113598-54113617 Msa0212190:three_prime_UTR 35.0%
! TTTTGCAGTGGTATTTTCAG+CGG - chr2_1:54113769-54113788 Msa0212190:three_prime_UTR 35.0%
ACAATTGCAACTATACGGTT+TGG - chr2_1:54113807-54113826 Msa0212190:three_prime_UTR 35.0%
CATACTACTAGTGGAAATAG+TGG - chr2_1:54113839-54113858 Msa0212190:three_prime_UTR 35.0%
GTAATTGTTGAATTCTCACG+GGG + chr2_1:54113902-54113921 None:intergenic 35.0%
TATGATGTCAGCTTAGTAGA+CGG - chr2_1:54114106-54114125 Msa0212190:CDS 35.0%
!! TTTGTTACTTTCAACTCCGT+TGG + chr2_1:54114223-54114242 None:intergenic 35.0%
TGCAAATTAAAAGCAGCACA+AGG + chr2_1:54114274-54114293 None:intergenic 35.0%
ATCATCATACGCATAGCTAT+AGG + chr2_1:54114386-54114405 None:intergenic 35.0%
AAAAACAACGTGATAATCGG+TGG + chr2_1:54114434-54114453 None:intergenic 35.0%
! TTGCTGAGAGCTTTTGAATA+CGG + chr2_1:54114889-54114908 None:intergenic 35.0%
TGTGGAAGCTAAAATCGAAA+TGG + chr2_1:54113598-54113617 None:intergenic 35.0%
!!! TTTCGATTTTAGCTTCCACA+TGG - chr2_1:54113598-54113617 Msa0212190:three_prime_UTR 35.0%
! TTTTGCAGTGGTATTTTCAG+CGG - chr2_1:54113769-54113788 Msa0212190:three_prime_UTR 35.0%
ACAATTGCAACTATACGGTT+TGG - chr2_1:54113807-54113826 Msa0212190:three_prime_UTR 35.0%
CATACTACTAGTGGAAATAG+TGG - chr2_1:54113839-54113858 Msa0212190:three_prime_UTR 35.0%
GTAATTGTTGAATTCTCACG+GGG + chr2_1:54113902-54113921 None:intergenic 35.0%
TATGATGTCAGCTTAGTAGA+CGG - chr2_1:54114106-54114125 Msa0212190:CDS 35.0%
!! TTTGTTACTTTCAACTCCGT+TGG + chr2_1:54114223-54114242 None:intergenic 35.0%
TGCAAATTAAAAGCAGCACA+AGG + chr2_1:54114274-54114293 None:intergenic 35.0%
ATCATCATACGCATAGCTAT+AGG + chr2_1:54114386-54114405 None:intergenic 35.0%
AAAAACAACGTGATAATCGG+TGG + chr2_1:54114434-54114453 None:intergenic 35.0%
! TTGCTGAGAGCTTTTGAATA+CGG + chr2_1:54114889-54114908 None:intergenic 35.0%
AATCGAAATGGAGAAGAAGG+TGG + chr2_1:54113586-54113605 None:intergenic 40.0%
AATGCAACATTAGCAACCAC+CGG - chr2_1:54113863-54113882 Msa0212190:three_prime_UTR 40.0%
!! ACGGGGTTTTAACATGAATC+CGG + chr2_1:54113885-54113904 None:intergenic 40.0%
!! CAAATGGACTGGTCATTTCT+GGG - chr2_1:54113931-54113950 Msa0212190:three_prime_UTR 40.0%
!! AAATGGACTGGTCATTTCTG+GGG - chr2_1:54113932-54113951 Msa0212190:three_prime_UTR 40.0%
CAAAAACTTCTCCTGTGTCA+CGG - chr2_1:54113982-54114001 Msa0212190:exon 40.0%
AAAAACTTCTCCTGTGTCAC+GGG - chr2_1:54113983-54114002 Msa0212190:exon 40.0%
CTAACGGAACAATTTCCATC+GGG + chr2_1:54114141-54114160 None:intergenic 40.0%
CCTAACGGAACAATTTCCAT+CGG + chr2_1:54114142-54114161 None:intergenic 40.0%
ATGGAAATTGTTCCGTTAGG+TGG - chr2_1:54114142-54114161 Msa0212190:CDS 40.0%
TTGTCCTACAGATTTGAACG+CGG - chr2_1:54114192-54114211 Msa0212190:CDS 40.0%
AACAAAAAATGGGACGGTTG+TGG - chr2_1:54114237-54114256 Msa0212190:CDS 40.0%
! TTGCAGTTTTTCTGTTGCGT+TGG - chr2_1:54114289-54114308 Msa0212190:CDS 40.0%
! TGCAGTTTTTCTGTTGCGTT+GGG - chr2_1:54114290-54114309 Msa0212190:CDS 40.0%
ACACTTGGCTCACAAGTATT+TGG + chr2_1:54114328-54114347 None:intergenic 40.0%
ATCTAACCTGGCGTTATTTG+AGG + chr2_1:54114464-54114483 None:intergenic 40.0%
!!! TATTAGTTTGCACCCGCTTT+TGG - chr2_1:54114594-54114613 Msa0212190:CDS 40.0%
! CTAGGTTGAAGTCTAAGCTA+GGG + chr2_1:54114942-54114961 None:intergenic 40.0%
AATCGAAATGGAGAAGAAGG+TGG + chr2_1:54113586-54113605 None:intergenic 40.0%
AATGCAACATTAGCAACCAC+CGG - chr2_1:54113863-54113882 Msa0212190:three_prime_UTR 40.0%
!! ACGGGGTTTTAACATGAATC+CGG + chr2_1:54113885-54113904 None:intergenic 40.0%
!! CAAATGGACTGGTCATTTCT+GGG - chr2_1:54113931-54113950 Msa0212190:three_prime_UTR 40.0%
!! AAATGGACTGGTCATTTCTG+GGG - chr2_1:54113932-54113951 Msa0212190:three_prime_UTR 40.0%
CAAAAACTTCTCCTGTGTCA+CGG - chr2_1:54113982-54114001 Msa0212190:exon 40.0%
AAAAACTTCTCCTGTGTCAC+GGG - chr2_1:54113983-54114002 Msa0212190:exon 40.0%
CTAACGGAACAATTTCCATC+GGG + chr2_1:54114141-54114160 None:intergenic 40.0%
CCTAACGGAACAATTTCCAT+CGG + chr2_1:54114142-54114161 None:intergenic 40.0%
ATGGAAATTGTTCCGTTAGG+TGG - chr2_1:54114142-54114161 Msa0212190:CDS 40.0%
TTGTCCTACAGATTTGAACG+CGG - chr2_1:54114192-54114211 Msa0212190:CDS 40.0%
AACAAAAAATGGGACGGTTG+TGG - chr2_1:54114237-54114256 Msa0212190:CDS 40.0%
! TTGCAGTTTTTCTGTTGCGT+TGG - chr2_1:54114289-54114308 Msa0212190:CDS 40.0%
! TGCAGTTTTTCTGTTGCGTT+GGG - chr2_1:54114290-54114309 Msa0212190:CDS 40.0%
ACACTTGGCTCACAAGTATT+TGG + chr2_1:54114328-54114347 None:intergenic 40.0%
ATCTAACCTGGCGTTATTTG+AGG + chr2_1:54114464-54114483 None:intergenic 40.0%
!!! TATTAGTTTGCACCCGCTTT+TGG - chr2_1:54114594-54114613 Msa0212190:CDS 40.0%
! CTAGGTTGAAGTCTAAGCTA+GGG + chr2_1:54114942-54114961 None:intergenic 40.0%
!! ATGACATTGGCTCAACCATG+TGG + chr2_1:54113616-54113635 None:intergenic 45.0%
CCACTAGTAGTATGTGAAGC+TGG + chr2_1:54113833-54113852 None:intergenic 45.0%
CCAGCTTCACATACTACTAG+TGG - chr2_1:54113830-54113849 Msa0212190:three_prime_UTR 45.0%
!! GGGTTTTAACATGAATCCGG+TGG + chr2_1:54113882-54113901 None:intergenic 45.0%
CAATTACAGCACCTGCCAAA+TGG - chr2_1:54113915-54113934 Msa0212190:three_prime_UTR 45.0%
AAATGACCAGTCCATTTGGC+AGG + chr2_1:54113929-54113948 None:intergenic 45.0%
CCAGAAATGACCAGTCCATT+TGG + chr2_1:54113933-54113952 None:intergenic 45.0%
!! CCAAATGGACTGGTCATTTC+TGG - chr2_1:54113930-54113949 Msa0212190:three_prime_UTR 45.0%
! CGTGACACAGGAGAAGTTTT+TGG + chr2_1:54113984-54114003 None:intergenic 45.0%
! ATTTTCGCCAGTGTCAAAGG+CGG + chr2_1:54114055-54114074 None:intergenic 45.0%
! GAGATTTTCGCCAGTGTCAA+AGG + chr2_1:54114058-54114077 None:intergenic 45.0%
AGACGGTTATAATGTCCCGA+TGG - chr2_1:54114123-54114142 Msa0212190:CDS 45.0%
CCGATGGAAATTGTTCCGTT+AGG - chr2_1:54114139-54114158 Msa0212190:CDS 45.0%
ATTGTTCCGTTAGGTGGTTC+CGG - chr2_1:54114148-54114167 Msa0212190:CDS 45.0%
! CGTGCTGTTACATGACTTAC+CGG + chr2_1:54114170-54114189 None:intergenic 45.0%
CGGTAAGTCATGTAACAGCA+CGG - chr2_1:54114168-54114187 Msa0212190:CDS 45.0%
GGTAAGTCATGTAACAGCAC+GGG - chr2_1:54114169-54114188 Msa0212190:CDS 45.0%
CATACCGCGTTCAAATCTGT+AGG + chr2_1:54114199-54114218 None:intergenic 45.0%
TTTGAACGCGGTATGTCCAA+CGG - chr2_1:54114204-54114223 Msa0212190:CDS 45.0%
TGTTGCGTTGGGAATCATTC+AGG - chr2_1:54114301-54114320 Msa0212190:CDS 45.0%
ACGCATAGCTATAGGCTTGA+GGG + chr2_1:54114378-54114397 None:intergenic 45.0%
TACGCATAGCTATAGGCTTG+AGG + chr2_1:54114379-54114398 None:intergenic 45.0%
CTGTTTACTGCGTTCTGTGT+TGG + chr2_1:54114701-54114720 None:intergenic 45.0%
! TTGAATACGGACTGCACTAG+TGG + chr2_1:54114876-54114895 None:intergenic 45.0%
CTAGGTCATAAGTGCAAACG+TGG + chr2_1:54114913-54114932 None:intergenic 45.0%
CACGTTTGCACTTATGACCT+AGG - chr2_1:54114911-54114930 Msa0212190:exon 45.0%
GTTGAAGTCTAAGCTAGGGT+AGG + chr2_1:54114938-54114957 None:intergenic 45.0%
! CCTAGGTTGAAGTCTAAGCT+AGG + chr2_1:54114943-54114962 None:intergenic 45.0%
CCTAGCTTAGACTTCAACCT+AGG - chr2_1:54114940-54114959 Msa0212190:five_prime_UTR 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + chr2_1:54114960-54114979 None:intergenic 45.0%
TGAGATGGGATCTCAGATCT+AGG + chr2_1:54114970-54114989 None:intergenic 45.0%
CTGTTGTAAGGGAGTGAGAT+GGG + chr2_1:54114984-54115003 None:intergenic 45.0%
TCTGTTGTAAGGGAGTGAGA+TGG + chr2_1:54114985-54115004 None:intergenic 45.0%
CTCACTCCCTTACAACAGAT+CGG - chr2_1:54114986-54115005 Msa0212190:five_prime_UTR 45.0%
!! ATGACATTGGCTCAACCATG+TGG + chr2_1:54113616-54113635 None:intergenic 45.0%
CCACTAGTAGTATGTGAAGC+TGG + chr2_1:54113833-54113852 None:intergenic 45.0%
CCAGCTTCACATACTACTAG+TGG - chr2_1:54113830-54113849 Msa0212190:three_prime_UTR 45.0%
!! GGGTTTTAACATGAATCCGG+TGG + chr2_1:54113882-54113901 None:intergenic 45.0%
CAATTACAGCACCTGCCAAA+TGG - chr2_1:54113915-54113934 Msa0212190:three_prime_UTR 45.0%
AAATGACCAGTCCATTTGGC+AGG + chr2_1:54113929-54113948 None:intergenic 45.0%
CCAGAAATGACCAGTCCATT+TGG + chr2_1:54113933-54113952 None:intergenic 45.0%
!! CCAAATGGACTGGTCATTTC+TGG - chr2_1:54113930-54113949 Msa0212190:three_prime_UTR 45.0%
! CGTGACACAGGAGAAGTTTT+TGG + chr2_1:54113984-54114003 None:intergenic 45.0%
! ATTTTCGCCAGTGTCAAAGG+CGG + chr2_1:54114055-54114074 None:intergenic 45.0%
! GAGATTTTCGCCAGTGTCAA+AGG + chr2_1:54114058-54114077 None:intergenic 45.0%
AGACGGTTATAATGTCCCGA+TGG - chr2_1:54114123-54114142 Msa0212190:CDS 45.0%
CCGATGGAAATTGTTCCGTT+AGG - chr2_1:54114139-54114158 Msa0212190:CDS 45.0%
ATTGTTCCGTTAGGTGGTTC+CGG - chr2_1:54114148-54114167 Msa0212190:CDS 45.0%
! CGTGCTGTTACATGACTTAC+CGG + chr2_1:54114170-54114189 None:intergenic 45.0%
CGGTAAGTCATGTAACAGCA+CGG - chr2_1:54114168-54114187 Msa0212190:CDS 45.0%
GGTAAGTCATGTAACAGCAC+GGG - chr2_1:54114169-54114188 Msa0212190:CDS 45.0%
CATACCGCGTTCAAATCTGT+AGG + chr2_1:54114199-54114218 None:intergenic 45.0%
TTTGAACGCGGTATGTCCAA+CGG - chr2_1:54114204-54114223 Msa0212190:CDS 45.0%
TGTTGCGTTGGGAATCATTC+AGG - chr2_1:54114301-54114320 Msa0212190:CDS 45.0%
ACGCATAGCTATAGGCTTGA+GGG + chr2_1:54114378-54114397 None:intergenic 45.0%
TACGCATAGCTATAGGCTTG+AGG + chr2_1:54114379-54114398 None:intergenic 45.0%
CTGTTTACTGCGTTCTGTGT+TGG + chr2_1:54114701-54114720 None:intergenic 45.0%
! TTGAATACGGACTGCACTAG+TGG + chr2_1:54114876-54114895 None:intergenic 45.0%
CTAGGTCATAAGTGCAAACG+TGG + chr2_1:54114913-54114932 None:intergenic 45.0%
CACGTTTGCACTTATGACCT+AGG - chr2_1:54114911-54114930 Msa0212190:exon 45.0%
GTTGAAGTCTAAGCTAGGGT+AGG + chr2_1:54114938-54114957 None:intergenic 45.0%
! CCTAGGTTGAAGTCTAAGCT+AGG + chr2_1:54114943-54114962 None:intergenic 45.0%
CCTAGCTTAGACTTCAACCT+AGG - chr2_1:54114940-54114959 Msa0212190:five_prime_UTR 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + chr2_1:54114960-54114979 None:intergenic 45.0%
TGAGATGGGATCTCAGATCT+AGG + chr2_1:54114970-54114989 None:intergenic 45.0%
CTGTTGTAAGGGAGTGAGAT+GGG + chr2_1:54114984-54115003 None:intergenic 45.0%
TCTGTTGTAAGGGAGTGAGA+TGG + chr2_1:54114985-54115004 None:intergenic 45.0%
TCCGGCAAAGTAGCATGTGA+TGG - chr2_1:54114016-54114035 Msa0212190:CDS 50.0%
!! GCCATCACATGCTACTTTGC+CGG + chr2_1:54114020-54114039 None:intergenic 50.0%
GACACTGGCGAAAATCTCTC+TGG - chr2_1:54114060-54114079 Msa0212190:CDS 50.0%
GACTTACCGGAACCACCTAA+CGG + chr2_1:54114157-54114176 None:intergenic 50.0%
TAAAAGCAGCACAAGGTCCC+TGG + chr2_1:54114267-54114286 None:intergenic 50.0%
ACAACGTGATAATCGGTGGC+CGG + chr2_1:54114430-54114449 None:intergenic 50.0%
! AACCTGGCGTTATTTGAGGC+AGG + chr2_1:54114460-54114479 None:intergenic 50.0%
AGGTGACGTTGCACCAAACT+TGG + chr2_1:54114822-54114841 None:intergenic 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + chr2_1:54114858-54114877 None:intergenic 50.0%
!! GCACTAGTGGATTTCCTTCC+TGG + chr2_1:54114863-54114882 None:intergenic 50.0%
TCTAAGCTAGGGTAGGTCCT+AGG + chr2_1:54114931-54114950 None:intergenic 50.0%
TCCGGCAAAGTAGCATGTGA+TGG - chr2_1:54114016-54114035 Msa0212190:CDS 50.0%
!! GCCATCACATGCTACTTTGC+CGG + chr2_1:54114020-54114039 None:intergenic 50.0%
GACACTGGCGAAAATCTCTC+TGG - chr2_1:54114060-54114079 Msa0212190:CDS 50.0%
GACTTACCGGAACCACCTAA+CGG + chr2_1:54114157-54114176 None:intergenic 50.0%
TAAAAGCAGCACAAGGTCCC+TGG + chr2_1:54114267-54114286 None:intergenic 50.0%
ACAACGTGATAATCGGTGGC+CGG + chr2_1:54114430-54114449 None:intergenic 50.0%
! AACCTGGCGTTATTTGAGGC+AGG + chr2_1:54114460-54114479 None:intergenic 50.0%
AGGTGACGTTGCACCAAACT+TGG + chr2_1:54114822-54114841 None:intergenic 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + chr2_1:54114858-54114877 None:intergenic 50.0%
!! GCACTAGTGGATTTCCTTCC+TGG + chr2_1:54114863-54114882 None:intergenic 50.0%
TCTAAGCTAGGGTAGGTCCT+AGG + chr2_1:54114931-54114950 None:intergenic 50.0%
ACAGCACCTGCCAAATGGAC+TGG - chr2_1:54113920-54113939 Msa0212190:three_prime_UTR 55.0%
!! GGACTGGTCATTTCTGGGGA+CGG - chr2_1:54113936-54113955 Msa0212190:three_prime_UTR 55.0%
GACCAGCACGTTCACTTGTC+CGG - chr2_1:54114408-54114427 Msa0212190:CDS 55.0%
GTCCTGCCTCAAATAACGCC+AGG - chr2_1:54114455-54114474 Msa0212190:CDS 55.0%
TGGTGCAACGTCACCTACTC+TGG - chr2_1:54114826-54114845 Msa0212190:intron 55.0%
GGTGCAACGTCACCTACTCT+GGG - chr2_1:54114827-54114846 Msa0212190:intron 55.0%
GTGCAACGTCACCTACTCTG+GGG - chr2_1:54114828-54114847 Msa0212190:intron 55.0%
TGCAACGTCACCTACTCTGG+GGG - chr2_1:54114829-54114848 Msa0212190:intron 55.0%
ACAGCACCTGCCAAATGGAC+TGG - chr2_1:54113920-54113939 Msa0212190:three_prime_UTR 55.0%
!! GGACTGGTCATTTCTGGGGA+CGG - chr2_1:54113936-54113955 Msa0212190:three_prime_UTR 55.0%
GACCAGCACGTTCACTTGTC+CGG - chr2_1:54114408-54114427 Msa0212190:CDS 55.0%
GTCCTGCCTCAAATAACGCC+AGG - chr2_1:54114455-54114474 Msa0212190:CDS 55.0%
TGGTGCAACGTCACCTACTC+TGG - chr2_1:54114826-54114845 Msa0212190:intron 55.0%
GGTGCAACGTCACCTACTCT+GGG - chr2_1:54114827-54114846 Msa0212190:intron 55.0%
GTGCAACGTCACCTACTCTG+GGG - chr2_1:54114828-54114847 Msa0212190:intron 55.0%
TGCAACGTCACCTACTCTGG+GGG - chr2_1:54114829-54114848 Msa0212190:intron 55.0%
TCCTGTGTCACGGGTGACTG+TGG - chr2_1:54113992-54114011 Msa0212190:exon 60.0%
TCCACAGTCACCCGTGACAC+AGG + chr2_1:54113996-54114015 None:intergenic 60.0%
GTCACGGGTGACTGTGGATC+CGG - chr2_1:54113998-54114017 Msa0212190:exon 60.0%
GTAGCATGTGATGGCCGCAG+CGG - chr2_1:54114025-54114044 Msa0212190:CDS 60.0%
TCAAAGGCGGTGATCCGCTG+CGG + chr2_1:54114042-54114061 None:intergenic 60.0%
CGGATCACCGCCTTTGACAC+TGG - chr2_1:54114045-54114064 Msa0212190:CDS 60.0%
TCCTGTGTCACGGGTGACTG+TGG - chr2_1:54113992-54114011 Msa0212190:exon 60.0%
TCCACAGTCACCCGTGACAC+AGG + chr2_1:54113996-54114015 None:intergenic 60.0%
GTCACGGGTGACTGTGGATC+CGG - chr2_1:54113998-54114017 Msa0212190:exon 60.0%
GTAGCATGTGATGGCCGCAG+CGG - chr2_1:54114025-54114044 Msa0212190:CDS 60.0%
TCAAAGGCGGTGATCCGCTG+CGG + chr2_1:54114042-54114061 None:intergenic 60.0%
CGGATCACCGCCTTTGACAC+TGG - chr2_1:54114045-54114064 Msa0212190:CDS 60.0%
GGCCGGACAAGTGAACGTGC+TGG + chr2_1:54114413-54114432 None:intergenic 65.0%
! GGCTTGGTAGCCCCCAGAGT+AGG + chr2_1:54114842-54114861 None:intergenic 65.0%
! ACTCTGGGGGCTACCAAGCC+AGG - chr2_1:54114842-54114861 Msa0212190:intron 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - chr2_1:54114846-54114865 Msa0212190:intron 65.0%
GGCCGGACAAGTGAACGTGC+TGG + chr2_1:54114413-54114432 None:intergenic 65.0%
! GGCTTGGTAGCCCCCAGAGT+AGG + chr2_1:54114842-54114861 None:intergenic 65.0%
! ACTCTGGGGGCTACCAAGCC+AGG - chr2_1:54114842-54114861 Msa0212190:intron 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - chr2_1:54114846-54114865 Msa0212190:intron 65.0%
TGGGACGGTTGTGGCGTGCC+AGG - chr2_1:54114246-54114265 Msa0212190:CDS 70.0%
GGGACGGTTGTGGCGTGCCA+GGG - chr2_1:54114247-54114266 Msa0212190:CDS 70.0%
TGGGACGGTTGTGGCGTGCC+AGG - chr2_1:54114246-54114265 Msa0212190:CDS 70.0%
GGGACGGTTGTGGCGTGCCA+GGG - chr2_1:54114247-54114266 Msa0212190:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 54113533 54115006 54113533 ID=Msa0212190;Name=Msa0212190
chr2_1 mRNA 54113533 54115006 54113533 ID=Msa0212190-mRNA-1;Parent=Msa0212190;Name=Msa0212190-mRNA-1;_AED=0.39;_eAED=0.39;_QI=84|1|1|1|1|1|2|466|273
chr2_1 exon 54113533 54114762 54113533 ID=Msa0212190-mRNA-1:exon:15007;Parent=Msa0212190-mRNA-1
chr2_1 exon 54114865 54115006 54114865 ID=Msa0212190-mRNA-1:exon:15006;Parent=Msa0212190-mRNA-1
chr2_1 five_prime_UTR 54114923 54115006 54114923 ID=Msa0212190-mRNA-1:five_prime_utr;Parent=Msa0212190-mRNA-1
chr2_1 CDS 54114865 54114922 54114865 ID=Msa0212190-mRNA-1:cds;Parent=Msa0212190-mRNA-1
chr2_1 CDS 54113999 54114762 54113999 ID=Msa0212190-mRNA-1:cds;Parent=Msa0212190-mRNA-1
chr2_1 three_prime_UTR 54113533 54113998 54113533 ID=Msa0212190-mRNA-1:three_prime_utr;Parent=Msa0212190-mRNA-1
Gene Sequence

>Msa0212190

ATGGTTGAGCCAATGTCATTTTTGTTCTTCTTCACACTTCATCTATCAATAACTTCAGTGGTATTTTCAGCGGAATTCACTATAGTTAACAATTGCAACTATACGGTTTGGCCAGCTTCACATACTACTAGTGGAAATAGTGGCAATGCAACATTAGCAACCACCGGATTCATGTTAAAACCCCGTGAGAATTCAACAATTACAGCACCTGCCAAATGGACTGGTCATTTCTGGGGACGGACTCTCTGTACAGATTCTGTCTCCAAAAACTTCTCCTGTGTCACGGGTGACTGTGGATCCGGCAAAGTAGCATGTGATGGCCGCAGCGGATCACCGCCTTTGACACTGGCGAAAATCTCTCTGGACAGTGCTAACAATCAAGATTTTTATGATGTCAGCTTAGTAGACGGTTATAATGTCCCGATGGAAATTGTTCCGTTAGGTGGTTCCGGTAAGTCATGTAACAGCACGGGTTGTCCTACAGATTTGAACGCGGTATGTCCAACGGAGTTGAAAGTAACAAAAAATGGGACGGTTGTGGCGTGCCAGGGACCTTGTGCTGCTTTTAATTTGCAGTTTTTCTGTTGCGTTGGGAATCATTCAGGTCCAAATACTTGTGAGCCAAGTGTGTATGCTAAGATATTCAAGACAACGTGCCCTCAAGCCTATAGCTATGCGTATGATGATCAGACCAGCACGTTCACTTGTCCGGCCACCGATTATCACGTTGTTTTTTGTCCTGCCTCAAATAACGCCAGGTTAGATACTAATACTAATAATAGTTCAAAATATTTTTCATGTCATTTTATATTTATAAAATAG
Protein sequence

>Msa0212190

MVEPMSFLFFFTLHLSITSVVFSAEFTIVNNCNYTVWPASHTTSGNSGNATLATTGFMLKPRENSTITAPAKWTGHFWGRTLCTDSVSKNFSCVTGDCGSGKVACDGRSGSPPLTLAKISLDSANNQDFYDVSLVDGYNVPMEIVPLGGSGKSCNSTGCPTDLNAVCPTELKVTKNGTVVACQGPCAAFNLQFFCCVGNHSGPNTCEPSVYAKIFKTTCPQAYSYAYDDQTSTFTCPATDYHVVFCPASNNARLDTNTNNSSKYFSCHFIFIK*