AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0329560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329560 MtrunA17_Chr2g0311521 88.716 257 27 2 1 256 1 256 1.33e-160 473
Msa0329560 MtrunA17_Chr2g0311551 80.545 257 45 4 1 256 1 253 6.37e-136 408
Msa0329560 MtrunA17_Chr1g0156711 52.290 262 114 5 7 263 7 262 1.06e-92 276
Msa0329560 MtrunA17_Chr3g0142781 53.629 248 108 4 8 252 11 254 5.41e-90 270
Msa0329560 MtrunA17_Chr2g0311561 56.223 233 98 2 23 254 10 239 2.91e-89 266
Msa0329560 MtrunA17_Chr8g0352471 53.219 233 105 2 19 250 21 250 2.27e-87 263
Msa0329560 MtrunA17_Chr2g0311531 55.686 255 78 8 21 269 24 249 1.16e-83 251
Msa0329560 MtrunA17_Chr8g0371781 51.020 245 109 3 23 260 27 267 3.48e-83 251
Msa0329560 MtrunA17_Chr8g0357311 51.709 234 108 3 22 253 24 254 4.94e-83 249
Msa0329560 MtrunA17_Chr4g0037351 50.199 251 118 3 1 247 1 248 1.55e-81 248
Msa0329560 MtrunA17_Chr5g0405581 48.387 248 118 5 5 247 9 251 1.30e-78 240
Msa0329560 MtrunA17_Chr5g0428801 46.667 255 127 4 2 251 4 254 5.16e-78 239
Msa0329560 MtrunA17_Chr1g0154591 51.037 241 105 7 9 247 3 232 2.36e-77 234
Msa0329560 MtrunA17_Chr5g0405611 47.876 259 122 5 4 260 76 323 1.86e-75 234
Msa0329560 MtrunA17_Chr7g0265011 48.035 229 112 5 21 247 64 287 2.41e-74 228
Msa0329560 MtrunA17_Chr2g0312181 45.714 245 127 4 5 247 3 243 8.71e-74 225
Msa0329560 MtrunA17_Chr4g0037331 48.548 241 116 4 6 246 7 239 1.63e-73 228
Msa0329560 MtrunA17_Chr8g0351851 47.917 240 114 6 8 246 8 237 1.66e-73 224
Msa0329560 MtrunA17_Chr1g0180161 45.489 266 130 7 5 268 10 262 1.66e-72 223
Msa0329560 MtrunA17_Chr3g0141341 50.439 228 105 7 26 251 14 235 1.35e-71 219
Msa0329560 MtrunA17_Chr1g0180221 45.935 246 117 6 5 248 52 283 7.25e-71 219
Msa0329560 MtrunA17_Chr1g0179851 46.218 238 121 5 14 249 9 241 2.64e-70 216
Msa0329560 MtrunA17_Chr1g0180121 45.714 245 119 6 5 247 10 242 1.36e-69 215
Msa0329560 MtrunA17_Chr1g0180231 45.749 247 120 6 5 249 10 244 2.75e-69 214
Msa0329560 MtrunA17_Chr1g0179871 45.749 247 120 6 5 249 10 244 2.75e-69 214
Msa0329560 MtrunA17_Chr1g0179891 45.935 246 119 6 6 249 6 239 3.51e-69 214
Msa0329560 MtrunA17_Chr8g0371771 47.718 241 113 6 8 246 14 243 3.09e-68 213
Msa0329560 MtrunA17_Chr8g0392961 48.182 220 105 5 30 247 33 245 1.71e-65 204
Msa0329560 MtrunA17_Chr2g0311501 51.562 192 86 6 69 255 2 191 1.30e-63 198
Msa0329560 MtrunA17_Chr6g0482741 42.041 245 132 6 5 247 4 240 1.94e-63 199
Msa0329560 MtrunA17_Chr7g0239131 41.129 248 139 5 1 247 1 242 4.30e-63 198
Msa0329560 MtrunA17_Chr5g0424221 44.130 247 123 7 1 246 7 239 5.51e-61 194
Msa0329560 MtrunA17_Chr3g0112091 38.843 242 141 5 8 247 1 237 3.94e-60 191
Msa0329560 MtrunA17_Chr6g0452331 40.226 266 146 8 1 258 3 263 1.24e-59 190
Msa0329560 MtrunA17_Chr4g0031221 40.249 241 130 9 13 246 18 251 1.44e-47 159
Msa0329560 MtrunA17_Chr5g0406771 43.011 186 93 4 5 187 1 176 1.50e-47 156
Msa0329560 MtrunA17_Chr5g0397821 40.708 226 110 7 23 247 23 225 4.55e-47 157
Msa0329560 MtrunA17_Chr5g0397831 36.220 254 135 7 1 247 3 236 4.31e-42 144
Msa0329560 MtrunA17_Chr8g0386341 39.442 251 123 10 1 247 23 248 4.53e-40 139
Msa0329560 MtrunA17_Chr2g0309611 30.120 249 157 7 5 245 10 249 3.17e-34 124
Msa0329560 MtrunA17_Chr1g0179911 28.682 258 163 6 1 252 1 243 6.23e-27 105
Msa0329560 MtrunA17_Chr8g0386351 31.837 245 93 10 5 247 46 218 1.25e-22 92.8
Msa0329560 MtrunA17_Chr1g0180181 43.119 109 58 4 163 268 12 119 9.54e-21 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329560 AT1G75800.1 50.388 258 119 4 1 253 1 254 1.02e-86 262
Msa0329560 AT1G20030.2 52.321 237 105 3 21 252 17 250 1.53e-84 256
Msa0329560 AT1G20030.1 52.119 236 105 3 22 252 1 233 6.26e-84 254
Msa0329560 AT2G17860.1 54.506 233 95 5 23 248 22 250 1.64e-81 246
Msa0329560 AT4G36010.1 52.743 237 102 4 21 250 20 253 1.48e-78 240
Msa0329560 AT4G36010.2 52.743 237 102 4 21 250 20 253 1.48e-78 240
Msa0329560 AT4G24180.6 49.200 250 112 5 5 248 17 257 1.32e-77 236
Msa0329560 AT4G24180.1 49.200 250 112 5 5 248 17 257 3.59e-77 237
Msa0329560 AT4G24180.5 48.400 250 109 6 5 248 17 252 1.89e-74 228
Msa0329560 AT4G24180.2 48.400 250 109 6 5 248 17 252 6.54e-74 228
Msa0329560 AT1G75050.1 49.593 246 112 7 7 250 11 246 8.37e-74 226
Msa0329560 AT4G38660.1 48.148 243 118 4 11 253 17 251 1.07e-73 229
Msa0329560 AT4G38670.3 46.939 245 123 4 7 247 6 247 6.98e-73 225
Msa0329560 AT4G38670.1 46.939 245 123 4 7 247 6 247 6.98e-73 225
Msa0329560 AT1G75040.1 46.964 247 123 4 1 247 1 239 2.30e-72 222
Msa0329560 AT4G38660.2 49.138 232 110 4 22 253 6 229 2.93e-72 224
Msa0329560 AT1G75030.1 49.180 244 110 8 7 247 11 243 6.50e-71 219
Msa0329560 AT4G38670.2 48.673 226 109 4 26 247 9 231 8.24e-71 219
Msa0329560 AT1G19320.1 47.154 246 119 5 6 246 7 246 1.12e-70 218
Msa0329560 AT5G38280.1 44.882 254 129 6 1 247 1 250 5.11e-70 228
Msa0329560 AT5G38280.2 44.882 254 129 6 1 247 1 250 1.06e-69 227
Msa0329560 AT5G24620.1 45.238 252 124 6 4 248 8 252 1.90e-69 220
Msa0329560 AT5G24620.4 45.238 252 124 6 4 248 63 307 6.62e-69 221
Msa0329560 AT5G24620.3 45.238 252 124 6 4 248 84 328 7.42e-69 221
Msa0329560 AT4G24180.3 48.291 234 106 5 5 232 17 241 1.36e-68 215
Msa0329560 AT1G73620.1 48.305 236 107 7 14 247 38 260 1.54e-67 211
Msa0329560 AT1G18250.1 46.610 236 111 7 14 247 17 239 3.22e-65 204
Msa0329560 AT4G24180.4 47.863 234 102 6 5 232 17 236 3.28e-65 206
Msa0329560 AT1G18250.2 47.598 229 109 7 23 247 19 240 1.89e-64 202
Msa0329560 AT1G77700.3 44.151 265 132 9 2 265 39 288 6.35e-63 201
Msa0329560 AT1G77700.2 44.223 251 126 8 2 251 39 276 1.52e-62 199
Msa0329560 AT1G77700.1 45.000 240 118 7 26 265 91 316 8.27e-61 196
Msa0329560 AT5G02140.2 39.331 239 140 3 10 247 7 241 3.58e-59 189
Msa0329560 AT5G02140.1 39.271 247 144 4 10 254 7 249 4.47e-59 190
Msa0329560 AT1G70250.1 40.400 250 130 7 22 262 143 382 1.78e-53 186
Msa0329560 AT2G28790.1 39.918 243 133 9 11 246 12 248 7.15e-52 170
Msa0329560 AT2G28790.2 39.918 243 133 9 11 246 37 273 7.22e-52 171
Msa0329560 AT5G40020.1 40.444 225 127 5 26 248 30 249 8.97e-51 167
Msa0329560 AT4G18253.1 35.458 251 151 4 1 250 1 241 9.01e-51 167
Msa0329560 AT4G11650.1 39.357 249 127 8 1 249 1 225 6.01e-47 157
Msa0329560 AT4G18250.1 37.600 250 146 4 1 249 34 274 2.86e-46 164
Msa0329560 AT4G36000.2 51.034 145 64 3 103 247 1 138 5.24e-46 154
Msa0329560 AT4G36000.1 51.034 145 64 3 103 247 1 138 5.24e-46 154
Msa0329560 AT5G24620.2 52.066 121 52 2 134 248 15 135 6.80e-36 130
Msa0329560 AT2G24810.1 50.649 77 38 0 170 246 116 192 1.99e-19 84.0

Find 96 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATGGACTGGTCATTTC+TGG 0.137238 2_4:-43319728 Msa0329560:CDS
TTATATCACAAAAGAAAATT+TGG 0.173764 2_4:-43320116 Msa0329560:five_prime_UTR
ACACTTGGCTCACAAGTATT+TGG 0.205169 2_4:+43319333 None:intergenic
GCACTAGTGGATTTCCTTCC+TGG 0.216731 2_4:+43318798 None:intergenic
TGCAAACTGTTTCTTGTTAT+CGG 0.235613 2_4:-43319107 Msa0329560:three_prime_UTR
TGTTGCGTTGGGAATCATTC+AGG 0.295847 2_4:-43319357 Msa0329560:CDS
GCTATACAAATCTGTTATTC+TGG 0.307815 2_4:-43319015 Msa0329560:three_prime_UTR
AGTTAACAATTGCAACTATA+CGG 0.316482 2_4:-43319856 Msa0329560:CDS
CCTAGGTTGAAGTCTAAGTT+AGG 0.325160 2_4:+43318718 None:intergenic
TATTAGTTTGCACCCGCTTT+TGG 0.333176 2_4:-43319064 Msa0329560:three_prime_UTR
CGGTGCAACGTCACCTACTC+TGG 0.339665 2_4:-43318832 Msa0329560:three_prime_UTR
TGGGACGGTTGTGGCGTGCC+AGG 0.354594 2_4:-43319412 Msa0329560:CDS
ATTGTTCCGTTAGGTGGTTC+CGG 0.360511 2_4:-43319510 Msa0329560:CDS
CGTGCTGTTACATGACTTAC+CGG 0.371524 2_4:+43319491 None:intergenic
GCCATCACATGCTACTTTGC+CGG 0.403351 2_4:+43319641 None:intergenic
GAGAAATTGTTAACCAAGTT+CGG 0.403946 2_4:-43318852 Msa0329560:three_prime_UTR
CCAGAAATGACCAGTCCATT+TGG 0.411350 2_4:+43319728 None:intergenic
CAAATGGACTGGTCATTTCT+GGG 0.415506 2_4:-43319727 Msa0329560:CDS
AGTGGATTTCCTTCCTGGCT+TGG 0.415945 2_4:+43318803 None:intergenic
ACAATTGCAACTATACGGTT+TGG 0.427382 2_4:-43319851 Msa0329560:CDS
CTGTTTACTGCGTTCTGTGT+TGG 0.441256 2_4:+43318960 None:intergenic
GACCAGCACGTTCACTTGTC+CGG 0.442150 2_4:-43319250 Msa0329560:CDS
CAATTACAGCGCCTGCCAAA+TGG 0.445223 2_4:-43319743 Msa0329560:CDS
ATCTAACCTGGCATTATTTG+AGG 0.453031 2_4:+43319197 None:intergenic
GGGGATTGTGATCTGTTGTA+AGG 0.460682 2_4:+43318665 None:intergenic
CTGTAATTGTTGAATTCTCA+CGG 0.465536 2_4:+43319757 None:intergenic
CGGATCACCGCCTTTGACAC+TGG 0.471134 2_4:-43319613 Msa0329560:CDS
GGTGCAACGTCACCTACTCT+GGG 0.475394 2_4:-43318831 Msa0329560:three_prime_UTR
AACAAGAAACAGTTTGCAAA+TGG 0.482654 2_4:+43319112 None:intergenic
TGTGGAAGCTAAAATCGAAA+TGG 0.487823 2_4:+43320063 None:intergenic
GTCACGGGTGACTGTGGATC+CGG 0.488422 2_4:-43319660 Msa0329560:CDS
CCGATGGAAATTGTTCCGTT+AGG 0.488627 2_4:-43319519 Msa0329560:CDS
ATCATCATACGCATAGCTAT+AGG 0.489323 2_4:+43319275 None:intergenic
TGAGATGGGATCTCAGATCT+AGG 0.489567 2_4:+43318691 None:intergenic
CATACTACTAGTGGAAATAG+TGG 0.491376 2_4:-43319819 Msa0329560:CDS
CTTCATCTATCAATAACTTC+AGG 0.492218 2_4:-43320005 Msa0329560:intron
GTCCTGCCTCAAATAATGCC+AGG 0.497866 2_4:-43319203 Msa0329560:CDS
TTTGTTACTTTCAACTCCGT+TGG 0.499048 2_4:+43319438 None:intergenic
ACGCATAGCTATAGGCTTGA+GGG 0.502843 2_4:+43319283 None:intergenic
AGGTGACGTTGCACCGAACT+TGG 0.504443 2_4:+43318839 None:intergenic
TAAAATCGAAATGGAGAAGA+AGG 0.505109 2_4:+43320072 None:intergenic
GACACTGGCGAAAATCTCTC+TGG 0.510712 2_4:-43319598 Msa0329560:CDS
TGTAATTGTTGAATTCTCAC+GGG 0.515013 2_4:+43319758 None:intergenic
ATGGAAATTGTTCCGTTAGG+TGG 0.518636 2_4:-43319516 Msa0329560:CDS
AACCTGGCATTATTTGAGGC+AGG 0.522017 2_4:+43319201 None:intergenic
TTGCTGAGAGCTTTCAAAGA+CGG 0.526485 2_4:+43318772 None:intergenic
GGGACGGTTGTGGCGTGCCA+GGG 0.531682 2_4:-43319411 Msa0329560:CDS
CCACTAGTAGTATGTGAAGC+TGG 0.536657 2_4:+43319828 None:intergenic
AAATGACCAGTCCATTTGGC+AGG 0.537182 2_4:+43319732 None:intergenic
TCTCAGATCTAGGAGTTCCT+AGG 0.542825 2_4:+43318701 None:intergenic
TCCTGTGTCACGGGTGACTG+TGG 0.545452 2_4:-43319666 Msa0329560:CDS
TAACAGACAGGAAAGAAAAG+AGG 0.551315 2_4:-43318879 Msa0329560:three_prime_UTR
TCTAAGTTAGGGTAGGTCCT+AGG 0.556430 2_4:+43318730 None:intergenic
ACAGCGCCTGCCAAATGGAC+TGG 0.564539 2_4:-43319738 Msa0329560:CDS
CTAGGTTGAAGTCTAAGTTA+GGG 0.564715 2_4:+43318719 None:intergenic
CCTAACTTAGACTTCAACCT+AGG 0.564997 2_4:-43318718 Msa0329560:three_prime_UTR
ATAGATAAGTTAACCAAAAG+CGG 0.565123 2_4:+43319051 None:intergenic
CCAGCTTCACATACTACTAG+TGG 0.566702 2_4:-43319828 Msa0329560:CDS
TCAAAGACGGACTGCACTAG+TGG 0.571406 2_4:+43318785 None:intergenic
CACGTTTGCACTTATGACCT+AGG 0.571659 2_4:-43318747 Msa0329560:three_prime_UTR
TAGATAAGTTAACCAAAAGC+GGG 0.577329 2_4:+43319052 None:intergenic
TACGCATAGCTATAGGCTTG+AGG 0.579746 2_4:+43319282 None:intergenic
GGGATTGTGATCTGTTGTAA+GGG 0.586400 2_4:+43318666 None:intergenic
GGACTGGTCATTTCTGGGGA+CGG 0.586901 2_4:-43319722 Msa0329560:CDS
CTGTTGTAAGGGAGTGAGAT+GGG 0.587980 2_4:+43318677 None:intergenic
TATGATGTCAGCTTAGTAGA+CGG 0.592433 2_4:-43319552 Msa0329560:CDS
TCCACAGTCACCCGTGACAC+AGG 0.592636 2_4:+43319665 None:intergenic
TAAAAGCAGCACAAGGACCC+TGG 0.593694 2_4:+43319394 None:intergenic
ATTAGTATTAGTATCTAACC+TGG 0.597518 2_4:+43319185 None:intergenic
CTAACGGAACAATTTCCATC+GGG 0.598873 2_4:+43319520 None:intergenic
ACAACGTGATAATCGGTGGC+CGG 0.599855 2_4:+43319231 None:intergenic
AACAGAGAGAAATAACAGAC+AGG 0.601735 2_4:-43318891 Msa0329560:three_prime_UTR
CCTAACGGAACAATTTCCAT+CGG 0.605818 2_4:+43319519 None:intergenic
GGCCGGACAAGTGAACGTGC+TGG 0.609375 2_4:+43319248 None:intergenic
CGGTAAGTCATGTAACAGCA+CGG 0.610003 2_4:-43319490 Msa0329560:CDS
TCCGGCAAAGTAGCATGTGA+TGG 0.612293 2_4:-43319642 Msa0329560:CDS
AATCGAAATGGAGAAGAAGG+TGG 0.612396 2_4:+43320075 None:intergenic
GGTAAGTCATGTAACAGCAC+GGG 0.618640 2_4:-43319489 Msa0329560:CDS
AATATCTTAGCATACACACT+TGG 0.620283 2_4:+43319318 None:intergenic
TGCAACGTCACCTACTCTGG+GGG 0.623369 2_4:-43318829 Msa0329560:three_prime_UTR
GACTTACCGGAACCACCTAA+CGG 0.626338 2_4:+43319504 None:intergenic
TCTGTTGTAAGGGAGTGAGA+TGG 0.629255 2_4:+43318676 None:intergenic
GTTGAAGTCTAAGTTAGGGT+AGG 0.636132 2_4:+43318723 None:intergenic
TTTGAACGCGGTATGTCCAA+CGG 0.637039 2_4:-43319454 Msa0329560:CDS
CTAGGTCATAAGTGCAAACG+TGG 0.640820 2_4:+43318748 None:intergenic
AATGCAACATTAGCAACCAC+CGG 0.645956 2_4:-43319795 Msa0329560:CDS
AAATGGACTGGTCATTTCTG+GGG 0.649772 2_4:-43319726 Msa0329560:CDS
GTGCAACGTCACCTACTCTG+GGG 0.651302 2_4:-43318830 Msa0329560:three_prime_UTR
TCAAAGGCGGTGATCCGCTG+CGG 0.664709 2_4:+43319619 None:intergenic
ATGACATTGGCTCAACCATG+TGG 0.665026 2_4:+43320045 None:intergenic
GTAATTGTTGAATTCTCACG+GGG 0.675678 2_4:+43319759 None:intergenic
TGCAAATTAAAAGCAGCACA+AGG 0.677516 2_4:+43319387 None:intergenic
GTAGCATGTGATGGCCGCAG+CGG 0.682961 2_4:-43319633 Msa0329560:CDS
AGACGGTTATAATGTCCCGA+TGG 0.683696 2_4:-43319535 Msa0329560:CDS
CATACCGCGTTCAAATCTGT+AGG 0.700053 2_4:+43319462 None:intergenic
TTGTCCTACAGATTTGAACG+CGG 0.778811 2_4:-43319466 Msa0329560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTTGTGATATAAAA+GGG + chr2_4:43318681-43318700 None:intergenic 15.0%
!!! ATTTTCTTTTGTGATATAAA+AGG + chr2_4:43318682-43318701 None:intergenic 15.0%
!! TTATATCACAAAAGAAAATT+TGG - chr2_4:43318683-43318702 Msa0329560:three_prime_UTR 15.0%
!!! TTTTCTTTTGTGATATAAAA+GGG + chr2_4:43318681-43318700 None:intergenic 15.0%
!!! ATTTTCTTTTGTGATATAAA+AGG + chr2_4:43318682-43318701 None:intergenic 15.0%
!! TTATATCACAAAAGAAAATT+TGG - chr2_4:43318683-43318702 Msa0329560:three_prime_UTR 15.0%
!! AGTTGAAAGTAACAAAAAAT+GGG - chr2_4:43319368-43319387 Msa0329560:CDS 20.0%
!! AGTTGAAAGTAACAAAAAAT+GGG - chr2_4:43319368-43319387 Msa0329560:CDS 20.0%
! AAGAAGAACAAAAATGACAT+TGG + chr2_4:43318770-43318789 None:intergenic 25.0%
!!! TCTTTTTTTCTATTTTGCAG+TGG - chr2_4:43318898-43318917 Msa0329560:three_prime_UTR 25.0%
! AGTTAACAATTGCAACTATA+CGG - chr2_4:43318943-43318962 Msa0329560:three_prime_UTR 25.0%
! GAGTTGAAAGTAACAAAAAA+TGG - chr2_4:43319367-43319386 Msa0329560:CDS 25.0%
! ACAAAAAACAACGTGATAAT+CGG + chr2_4:43319578-43319597 None:intergenic 25.0%
! ATTAGTATTAGTATCTAACC+TGG + chr2_4:43319617-43319636 None:intergenic 25.0%
! ATAGATAAGTTAACCAAAAG+CGG + chr2_4:43319751-43319770 None:intergenic 25.0%
! AAGAAGAACAAAAATGACAT+TGG + chr2_4:43318770-43318789 None:intergenic 25.0%
!!! TCTTTTTTTCTATTTTGCAG+TGG - chr2_4:43318898-43318917 Msa0329560:three_prime_UTR 25.0%
! AGTTAACAATTGCAACTATA+CGG - chr2_4:43318943-43318962 Msa0329560:three_prime_UTR 25.0%
! GAGTTGAAAGTAACAAAAAA+TGG - chr2_4:43319367-43319386 Msa0329560:CDS 25.0%
! ACAAAAAACAACGTGATAAT+CGG + chr2_4:43319578-43319597 None:intergenic 25.0%
! ATTAGTATTAGTATCTAACC+TGG + chr2_4:43319617-43319636 None:intergenic 25.0%
! ATAGATAAGTTAACCAAAAG+CGG + chr2_4:43319751-43319770 None:intergenic 25.0%
TAAAATCGAAATGGAGAAGA+AGG + chr2_4:43318730-43318749 None:intergenic 30.0%
CTTCATCTATCAATAACTTC+AGG - chr2_4:43318794-43318813 Msa0329560:three_prime_UTR 30.0%
TGTAATTGTTGAATTCTCAC+GGG + chr2_4:43319044-43319063 None:intergenic 30.0%
CTGTAATTGTTGAATTCTCA+CGG + chr2_4:43319045-43319064 None:intergenic 30.0%
GAAAGTAACAAAAAATGGGA+CGG - chr2_4:43319372-43319391 Msa0329560:CDS 30.0%
AATATCTTAGCATACACACT+TGG + chr2_4:43319484-43319503 None:intergenic 30.0%
AACAAGAAACAGTTTGCAAA+TGG + chr2_4:43319690-43319709 None:intergenic 30.0%
! TGCAAACTGTTTCTTGTTAT+CGG - chr2_4:43319692-43319711 Msa0329560:CDS 30.0%
TAGATAAGTTAACCAAAAGC+GGG + chr2_4:43319750-43319769 None:intergenic 30.0%
GCTATACAAATCTGTTATTC+TGG - chr2_4:43319784-43319803 Msa0329560:CDS 30.0%
GAGAAATTGTTAACCAAGTT+CGG - chr2_4:43319947-43319966 Msa0329560:intron 30.0%
TAAAATCGAAATGGAGAAGA+AGG + chr2_4:43318730-43318749 None:intergenic 30.0%
CTTCATCTATCAATAACTTC+AGG - chr2_4:43318794-43318813 Msa0329560:three_prime_UTR 30.0%
TGTAATTGTTGAATTCTCAC+GGG + chr2_4:43319044-43319063 None:intergenic 30.0%
CTGTAATTGTTGAATTCTCA+CGG + chr2_4:43319045-43319064 None:intergenic 30.0%
GAAAGTAACAAAAAATGGGA+CGG - chr2_4:43319372-43319391 Msa0329560:CDS 30.0%
AATATCTTAGCATACACACT+TGG + chr2_4:43319484-43319503 None:intergenic 30.0%
AACAAGAAACAGTTTGCAAA+TGG + chr2_4:43319690-43319709 None:intergenic 30.0%
! TGCAAACTGTTTCTTGTTAT+CGG - chr2_4:43319692-43319711 Msa0329560:CDS 30.0%
TAGATAAGTTAACCAAAAGC+GGG + chr2_4:43319750-43319769 None:intergenic 30.0%
GCTATACAAATCTGTTATTC+TGG - chr2_4:43319784-43319803 Msa0329560:CDS 30.0%
GAGAAATTGTTAACCAAGTT+CGG - chr2_4:43319947-43319966 Msa0329560:intron 30.0%
TGTGGAAGCTAAAATCGAAA+TGG + chr2_4:43318739-43318758 None:intergenic 35.0%
!!! TTTCGATTTTAGCTTCCACA+TGG - chr2_4:43318739-43318758 Msa0329560:three_prime_UTR 35.0%
! TTTTGCAGTGGTATTTTCAG+CGG - chr2_4:43318910-43318929 Msa0329560:three_prime_UTR 35.0%
ACAATTGCAACTATACGGTT+TGG - chr2_4:43318948-43318967 Msa0329560:three_prime_UTR 35.0%
CATACTACTAGTGGAAATAG+TGG - chr2_4:43318980-43318999 Msa0329560:three_prime_UTR 35.0%
GTAATTGTTGAATTCTCACG+GGG + chr2_4:43319043-43319062 None:intergenic 35.0%
TATGATGTCAGCTTAGTAGA+CGG - chr2_4:43319247-43319266 Msa0329560:CDS 35.0%
!! TTTGTTACTTTCAACTCCGT+TGG + chr2_4:43319364-43319383 None:intergenic 35.0%
TGCAAATTAAAAGCAGCACA+AGG + chr2_4:43319415-43319434 None:intergenic 35.0%
ATCATCATACGCATAGCTAT+AGG + chr2_4:43319527-43319546 None:intergenic 35.0%
AAAAACAACGTGATAATCGG+TGG + chr2_4:43319575-43319594 None:intergenic 35.0%
ATCTAACCTGGCATTATTTG+AGG + chr2_4:43319605-43319624 None:intergenic 35.0%
AACAGAGAGAAATAACAGAC+AGG - chr2_4:43319908-43319927 Msa0329560:intron 35.0%
TAACAGACAGGAAAGAAAAG+AGG - chr2_4:43319920-43319939 Msa0329560:intron 35.0%
! CTAGGTTGAAGTCTAAGTTA+GGG + chr2_4:43320083-43320102 None:intergenic 35.0%
TGTGGAAGCTAAAATCGAAA+TGG + chr2_4:43318739-43318758 None:intergenic 35.0%
!!! TTTCGATTTTAGCTTCCACA+TGG - chr2_4:43318739-43318758 Msa0329560:three_prime_UTR 35.0%
! TTTTGCAGTGGTATTTTCAG+CGG - chr2_4:43318910-43318929 Msa0329560:three_prime_UTR 35.0%
ACAATTGCAACTATACGGTT+TGG - chr2_4:43318948-43318967 Msa0329560:three_prime_UTR 35.0%
CATACTACTAGTGGAAATAG+TGG - chr2_4:43318980-43318999 Msa0329560:three_prime_UTR 35.0%
GTAATTGTTGAATTCTCACG+GGG + chr2_4:43319043-43319062 None:intergenic 35.0%
TATGATGTCAGCTTAGTAGA+CGG - chr2_4:43319247-43319266 Msa0329560:CDS 35.0%
!! TTTGTTACTTTCAACTCCGT+TGG + chr2_4:43319364-43319383 None:intergenic 35.0%
TGCAAATTAAAAGCAGCACA+AGG + chr2_4:43319415-43319434 None:intergenic 35.0%
ATCATCATACGCATAGCTAT+AGG + chr2_4:43319527-43319546 None:intergenic 35.0%
AAAAACAACGTGATAATCGG+TGG + chr2_4:43319575-43319594 None:intergenic 35.0%
ATCTAACCTGGCATTATTTG+AGG + chr2_4:43319605-43319624 None:intergenic 35.0%
AACAGAGAGAAATAACAGAC+AGG - chr2_4:43319908-43319927 Msa0329560:intron 35.0%
TAACAGACAGGAAAGAAAAG+AGG - chr2_4:43319920-43319939 Msa0329560:intron 35.0%
! CTAGGTTGAAGTCTAAGTTA+GGG + chr2_4:43320083-43320102 None:intergenic 35.0%
AATCGAAATGGAGAAGAAGG+TGG + chr2_4:43318727-43318746 None:intergenic 40.0%
AATGCAACATTAGCAACCAC+CGG - chr2_4:43319004-43319023 Msa0329560:three_prime_UTR 40.0%
!! ACGGGGTTTTAACATGAATC+CGG + chr2_4:43319026-43319045 None:intergenic 40.0%
!! CAAATGGACTGGTCATTTCT+GGG - chr2_4:43319072-43319091 Msa0329560:three_prime_UTR 40.0%
!! AAATGGACTGGTCATTTCTG+GGG - chr2_4:43319073-43319092 Msa0329560:three_prime_UTR 40.0%
CAAAAACTTCTCCTGTGTCA+CGG - chr2_4:43319123-43319142 Msa0329560:exon 40.0%
AAAAACTTCTCCTGTGTCAC+GGG - chr2_4:43319124-43319143 Msa0329560:exon 40.0%
CTAACGGAACAATTTCCATC+GGG + chr2_4:43319282-43319301 None:intergenic 40.0%
CCTAACGGAACAATTTCCAT+CGG + chr2_4:43319283-43319302 None:intergenic 40.0%
ATGGAAATTGTTCCGTTAGG+TGG - chr2_4:43319283-43319302 Msa0329560:CDS 40.0%
TTGTCCTACAGATTTGAACG+CGG - chr2_4:43319333-43319352 Msa0329560:CDS 40.0%
AACAAAAAATGGGACGGTTG+TGG - chr2_4:43319378-43319397 Msa0329560:CDS 40.0%
! TTGCAGTTTTTCTGTTGCGT+TGG - chr2_4:43319430-43319449 Msa0329560:CDS 40.0%
! TGCAGTTTTTCTGTTGCGTT+GGG - chr2_4:43319431-43319450 Msa0329560:CDS 40.0%
ACACTTGGCTCACAAGTATT+TGG + chr2_4:43319469-43319488 None:intergenic 40.0%
!!! TATTAGTTTGCACCCGCTTT+TGG - chr2_4:43319735-43319754 Msa0329560:CDS 40.0%
TTGCTGAGAGCTTTCAAAGA+CGG + chr2_4:43320030-43320049 None:intergenic 40.0%
GTTGAAGTCTAAGTTAGGGT+AGG + chr2_4:43320079-43320098 None:intergenic 40.0%
! CCTAGGTTGAAGTCTAAGTT+AGG + chr2_4:43320084-43320103 None:intergenic 40.0%
CCTAACTTAGACTTCAACCT+AGG - chr2_4:43320081-43320100 Msa0329560:five_prime_UTR 40.0%
AATCGAAATGGAGAAGAAGG+TGG + chr2_4:43318727-43318746 None:intergenic 40.0%
AATGCAACATTAGCAACCAC+CGG - chr2_4:43319004-43319023 Msa0329560:three_prime_UTR 40.0%
!! ACGGGGTTTTAACATGAATC+CGG + chr2_4:43319026-43319045 None:intergenic 40.0%
!! CAAATGGACTGGTCATTTCT+GGG - chr2_4:43319072-43319091 Msa0329560:three_prime_UTR 40.0%
!! AAATGGACTGGTCATTTCTG+GGG - chr2_4:43319073-43319092 Msa0329560:three_prime_UTR 40.0%
CAAAAACTTCTCCTGTGTCA+CGG - chr2_4:43319123-43319142 Msa0329560:exon 40.0%
AAAAACTTCTCCTGTGTCAC+GGG - chr2_4:43319124-43319143 Msa0329560:exon 40.0%
CTAACGGAACAATTTCCATC+GGG + chr2_4:43319282-43319301 None:intergenic 40.0%
CCTAACGGAACAATTTCCAT+CGG + chr2_4:43319283-43319302 None:intergenic 40.0%
ATGGAAATTGTTCCGTTAGG+TGG - chr2_4:43319283-43319302 Msa0329560:CDS 40.0%
TTGTCCTACAGATTTGAACG+CGG - chr2_4:43319333-43319352 Msa0329560:CDS 40.0%
AACAAAAAATGGGACGGTTG+TGG - chr2_4:43319378-43319397 Msa0329560:CDS 40.0%
! TTGCAGTTTTTCTGTTGCGT+TGG - chr2_4:43319430-43319449 Msa0329560:CDS 40.0%
! TGCAGTTTTTCTGTTGCGTT+GGG - chr2_4:43319431-43319450 Msa0329560:CDS 40.0%
ACACTTGGCTCACAAGTATT+TGG + chr2_4:43319469-43319488 None:intergenic 40.0%
!!! TATTAGTTTGCACCCGCTTT+TGG - chr2_4:43319735-43319754 Msa0329560:CDS 40.0%
TTGCTGAGAGCTTTCAAAGA+CGG + chr2_4:43320030-43320049 None:intergenic 40.0%
GTTGAAGTCTAAGTTAGGGT+AGG + chr2_4:43320079-43320098 None:intergenic 40.0%
! CCTAGGTTGAAGTCTAAGTT+AGG + chr2_4:43320084-43320103 None:intergenic 40.0%
CCTAACTTAGACTTCAACCT+AGG - chr2_4:43320081-43320100 Msa0329560:five_prime_UTR 40.0%
!! ATGACATTGGCTCAACCATG+TGG + chr2_4:43318757-43318776 None:intergenic 45.0%
CCACTAGTAGTATGTGAAGC+TGG + chr2_4:43318974-43318993 None:intergenic 45.0%
CCAGCTTCACATACTACTAG+TGG - chr2_4:43318971-43318990 Msa0329560:three_prime_UTR 45.0%
!! GGGTTTTAACATGAATCCGG+TGG + chr2_4:43319023-43319042 None:intergenic 45.0%
AAATGACCAGTCCATTTGGC+AGG + chr2_4:43319070-43319089 None:intergenic 45.0%
CCAGAAATGACCAGTCCATT+TGG + chr2_4:43319074-43319093 None:intergenic 45.0%
!! CCAAATGGACTGGTCATTTC+TGG - chr2_4:43319071-43319090 Msa0329560:three_prime_UTR 45.0%
! CGTGACACAGGAGAAGTTTT+TGG + chr2_4:43319125-43319144 None:intergenic 45.0%
! ATTTTCGCCAGTGTCAAAGG+CGG + chr2_4:43319196-43319215 None:intergenic 45.0%
! GAGATTTTCGCCAGTGTCAA+AGG + chr2_4:43319199-43319218 None:intergenic 45.0%
AGACGGTTATAATGTCCCGA+TGG - chr2_4:43319264-43319283 Msa0329560:CDS 45.0%
CCGATGGAAATTGTTCCGTT+AGG - chr2_4:43319280-43319299 Msa0329560:CDS 45.0%
ATTGTTCCGTTAGGTGGTTC+CGG - chr2_4:43319289-43319308 Msa0329560:CDS 45.0%
! CGTGCTGTTACATGACTTAC+CGG + chr2_4:43319311-43319330 None:intergenic 45.0%
CGGTAAGTCATGTAACAGCA+CGG - chr2_4:43319309-43319328 Msa0329560:CDS 45.0%
GGTAAGTCATGTAACAGCAC+GGG - chr2_4:43319310-43319329 Msa0329560:CDS 45.0%
CATACCGCGTTCAAATCTGT+AGG + chr2_4:43319340-43319359 None:intergenic 45.0%
TTTGAACGCGGTATGTCCAA+CGG - chr2_4:43319345-43319364 Msa0329560:CDS 45.0%
TGTTGCGTTGGGAATCATTC+AGG - chr2_4:43319442-43319461 Msa0329560:CDS 45.0%
ACGCATAGCTATAGGCTTGA+GGG + chr2_4:43319519-43319538 None:intergenic 45.0%
TACGCATAGCTATAGGCTTG+AGG + chr2_4:43319520-43319539 None:intergenic 45.0%
! AACCTGGCATTATTTGAGGC+AGG + chr2_4:43319601-43319620 None:intergenic 45.0%
CTGTTTACTGCGTTCTGTGT+TGG + chr2_4:43319842-43319861 None:intergenic 45.0%
CTAGGTCATAAGTGCAAACG+TGG + chr2_4:43320054-43320073 None:intergenic 45.0%
CACGTTTGCACTTATGACCT+AGG - chr2_4:43320052-43320071 Msa0329560:exon 45.0%
TCTAAGTTAGGGTAGGTCCT+AGG + chr2_4:43320072-43320091 None:intergenic 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + chr2_4:43320101-43320120 None:intergenic 45.0%
TGAGATGGGATCTCAGATCT+AGG + chr2_4:43320111-43320130 None:intergenic 45.0%
CTGTTGTAAGGGAGTGAGAT+GGG + chr2_4:43320125-43320144 None:intergenic 45.0%
TCTGTTGTAAGGGAGTGAGA+TGG + chr2_4:43320126-43320145 None:intergenic 45.0%
CTCACTCCCTTACAACAGAT+CGG - chr2_4:43320127-43320146 Msa0329560:five_prime_UTR 45.0%
!! ATGACATTGGCTCAACCATG+TGG + chr2_4:43318757-43318776 None:intergenic 45.0%
CCACTAGTAGTATGTGAAGC+TGG + chr2_4:43318974-43318993 None:intergenic 45.0%
CCAGCTTCACATACTACTAG+TGG - chr2_4:43318971-43318990 Msa0329560:three_prime_UTR 45.0%
!! GGGTTTTAACATGAATCCGG+TGG + chr2_4:43319023-43319042 None:intergenic 45.0%
AAATGACCAGTCCATTTGGC+AGG + chr2_4:43319070-43319089 None:intergenic 45.0%
CCAGAAATGACCAGTCCATT+TGG + chr2_4:43319074-43319093 None:intergenic 45.0%
!! CCAAATGGACTGGTCATTTC+TGG - chr2_4:43319071-43319090 Msa0329560:three_prime_UTR 45.0%
! CGTGACACAGGAGAAGTTTT+TGG + chr2_4:43319125-43319144 None:intergenic 45.0%
! ATTTTCGCCAGTGTCAAAGG+CGG + chr2_4:43319196-43319215 None:intergenic 45.0%
! GAGATTTTCGCCAGTGTCAA+AGG + chr2_4:43319199-43319218 None:intergenic 45.0%
AGACGGTTATAATGTCCCGA+TGG - chr2_4:43319264-43319283 Msa0329560:CDS 45.0%
CCGATGGAAATTGTTCCGTT+AGG - chr2_4:43319280-43319299 Msa0329560:CDS 45.0%
ATTGTTCCGTTAGGTGGTTC+CGG - chr2_4:43319289-43319308 Msa0329560:CDS 45.0%
! CGTGCTGTTACATGACTTAC+CGG + chr2_4:43319311-43319330 None:intergenic 45.0%
CGGTAAGTCATGTAACAGCA+CGG - chr2_4:43319309-43319328 Msa0329560:CDS 45.0%
GGTAAGTCATGTAACAGCAC+GGG - chr2_4:43319310-43319329 Msa0329560:CDS 45.0%
CATACCGCGTTCAAATCTGT+AGG + chr2_4:43319340-43319359 None:intergenic 45.0%
TTTGAACGCGGTATGTCCAA+CGG - chr2_4:43319345-43319364 Msa0329560:CDS 45.0%
TGTTGCGTTGGGAATCATTC+AGG - chr2_4:43319442-43319461 Msa0329560:CDS 45.0%
ACGCATAGCTATAGGCTTGA+GGG + chr2_4:43319519-43319538 None:intergenic 45.0%
TACGCATAGCTATAGGCTTG+AGG + chr2_4:43319520-43319539 None:intergenic 45.0%
! AACCTGGCATTATTTGAGGC+AGG + chr2_4:43319601-43319620 None:intergenic 45.0%
CTGTTTACTGCGTTCTGTGT+TGG + chr2_4:43319842-43319861 None:intergenic 45.0%
CTAGGTCATAAGTGCAAACG+TGG + chr2_4:43320054-43320073 None:intergenic 45.0%
CACGTTTGCACTTATGACCT+AGG - chr2_4:43320052-43320071 Msa0329560:exon 45.0%
TCTAAGTTAGGGTAGGTCCT+AGG + chr2_4:43320072-43320091 None:intergenic 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + chr2_4:43320101-43320120 None:intergenic 45.0%
TGAGATGGGATCTCAGATCT+AGG + chr2_4:43320111-43320130 None:intergenic 45.0%
CTGTTGTAAGGGAGTGAGAT+GGG + chr2_4:43320125-43320144 None:intergenic 45.0%
TCTGTTGTAAGGGAGTGAGA+TGG + chr2_4:43320126-43320145 None:intergenic 45.0%
CAATTACAGCGCCTGCCAAA+TGG - chr2_4:43319056-43319075 Msa0329560:three_prime_UTR 50.0%
TCCGGCAAAGTAGCATGTGA+TGG - chr2_4:43319157-43319176 Msa0329560:CDS 50.0%
!! GCCATCACATGCTACTTTGC+CGG + chr2_4:43319161-43319180 None:intergenic 50.0%
GACACTGGCGAAAATCTCTC+TGG - chr2_4:43319201-43319220 Msa0329560:CDS 50.0%
GACTTACCGGAACCACCTAA+CGG + chr2_4:43319298-43319317 None:intergenic 50.0%
TAAAAGCAGCACAAGGACCC+TGG + chr2_4:43319408-43319427 None:intergenic 50.0%
ACAACGTGATAATCGGTGGC+CGG + chr2_4:43319571-43319590 None:intergenic 50.0%
GTCCTGCCTCAAATAATGCC+AGG - chr2_4:43319596-43319615 Msa0329560:CDS 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + chr2_4:43319999-43320018 None:intergenic 50.0%
!! GCACTAGTGGATTTCCTTCC+TGG + chr2_4:43320004-43320023 None:intergenic 50.0%
!! TCAAAGACGGACTGCACTAG+TGG + chr2_4:43320017-43320036 None:intergenic 50.0%
CAATTACAGCGCCTGCCAAA+TGG - chr2_4:43319056-43319075 Msa0329560:three_prime_UTR 50.0%
TCCGGCAAAGTAGCATGTGA+TGG - chr2_4:43319157-43319176 Msa0329560:CDS 50.0%
!! GCCATCACATGCTACTTTGC+CGG + chr2_4:43319161-43319180 None:intergenic 50.0%
GACACTGGCGAAAATCTCTC+TGG - chr2_4:43319201-43319220 Msa0329560:CDS 50.0%
GACTTACCGGAACCACCTAA+CGG + chr2_4:43319298-43319317 None:intergenic 50.0%
TAAAAGCAGCACAAGGACCC+TGG + chr2_4:43319408-43319427 None:intergenic 50.0%
ACAACGTGATAATCGGTGGC+CGG + chr2_4:43319571-43319590 None:intergenic 50.0%
GTCCTGCCTCAAATAATGCC+AGG - chr2_4:43319596-43319615 Msa0329560:CDS 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + chr2_4:43319999-43320018 None:intergenic 50.0%
!! GCACTAGTGGATTTCCTTCC+TGG + chr2_4:43320004-43320023 None:intergenic 50.0%
!! TCAAAGACGGACTGCACTAG+TGG + chr2_4:43320017-43320036 None:intergenic 50.0%
!! GGACTGGTCATTTCTGGGGA+CGG - chr2_4:43319077-43319096 Msa0329560:three_prime_UTR 55.0%
GACCAGCACGTTCACTTGTC+CGG - chr2_4:43319549-43319568 Msa0329560:CDS 55.0%
AGGTGACGTTGCACCGAACT+TGG + chr2_4:43319963-43319982 None:intergenic 55.0%
GGTGCAACGTCACCTACTCT+GGG - chr2_4:43319968-43319987 Msa0329560:intron 55.0%
GTGCAACGTCACCTACTCTG+GGG - chr2_4:43319969-43319988 Msa0329560:intron 55.0%
TGCAACGTCACCTACTCTGG+GGG - chr2_4:43319970-43319989 Msa0329560:intron 55.0%
!! GGACTGGTCATTTCTGGGGA+CGG - chr2_4:43319077-43319096 Msa0329560:three_prime_UTR 55.0%
GACCAGCACGTTCACTTGTC+CGG - chr2_4:43319549-43319568 Msa0329560:CDS 55.0%
AGGTGACGTTGCACCGAACT+TGG + chr2_4:43319963-43319982 None:intergenic 55.0%
GGTGCAACGTCACCTACTCT+GGG - chr2_4:43319968-43319987 Msa0329560:intron 55.0%
GTGCAACGTCACCTACTCTG+GGG - chr2_4:43319969-43319988 Msa0329560:intron 55.0%
TGCAACGTCACCTACTCTGG+GGG - chr2_4:43319970-43319989 Msa0329560:intron 55.0%
ACAGCGCCTGCCAAATGGAC+TGG - chr2_4:43319061-43319080 Msa0329560:three_prime_UTR 60.0%
TCCTGTGTCACGGGTGACTG+TGG - chr2_4:43319133-43319152 Msa0329560:exon 60.0%
TCCACAGTCACCCGTGACAC+AGG + chr2_4:43319137-43319156 None:intergenic 60.0%
GTCACGGGTGACTGTGGATC+CGG - chr2_4:43319139-43319158 Msa0329560:exon 60.0%
GTAGCATGTGATGGCCGCAG+CGG - chr2_4:43319166-43319185 Msa0329560:CDS 60.0%
TCAAAGGCGGTGATCCGCTG+CGG + chr2_4:43319183-43319202 None:intergenic 60.0%
CGGATCACCGCCTTTGACAC+TGG - chr2_4:43319186-43319205 Msa0329560:CDS 60.0%
CGGTGCAACGTCACCTACTC+TGG - chr2_4:43319967-43319986 Msa0329560:intron 60.0%
ACAGCGCCTGCCAAATGGAC+TGG - chr2_4:43319061-43319080 Msa0329560:three_prime_UTR 60.0%
TCCTGTGTCACGGGTGACTG+TGG - chr2_4:43319133-43319152 Msa0329560:exon 60.0%
TCCACAGTCACCCGTGACAC+AGG + chr2_4:43319137-43319156 None:intergenic 60.0%
GTCACGGGTGACTGTGGATC+CGG - chr2_4:43319139-43319158 Msa0329560:exon 60.0%
GTAGCATGTGATGGCCGCAG+CGG - chr2_4:43319166-43319185 Msa0329560:CDS 60.0%
TCAAAGGCGGTGATCCGCTG+CGG + chr2_4:43319183-43319202 None:intergenic 60.0%
CGGATCACCGCCTTTGACAC+TGG - chr2_4:43319186-43319205 Msa0329560:CDS 60.0%
CGGTGCAACGTCACCTACTC+TGG - chr2_4:43319967-43319986 Msa0329560:intron 60.0%
GGCCGGACAAGTGAACGTGC+TGG + chr2_4:43319554-43319573 None:intergenic 65.0%
! GGCTTGGTAGCCCCCAGAGT+AGG + chr2_4:43319983-43320002 None:intergenic 65.0%
! ACTCTGGGGGCTACCAAGCC+AGG - chr2_4:43319983-43320002 Msa0329560:intron 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - chr2_4:43319987-43320006 Msa0329560:intron 65.0%
GGCCGGACAAGTGAACGTGC+TGG + chr2_4:43319554-43319573 None:intergenic 65.0%
! GGCTTGGTAGCCCCCAGAGT+AGG + chr2_4:43319983-43320002 None:intergenic 65.0%
! ACTCTGGGGGCTACCAAGCC+AGG - chr2_4:43319983-43320002 Msa0329560:intron 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - chr2_4:43319987-43320006 Msa0329560:intron 65.0%
TGGGACGGTTGTGGCGTGCC+AGG - chr2_4:43319387-43319406 Msa0329560:CDS 70.0%
GGGACGGTTGTGGCGTGCCA+GGG - chr2_4:43319388-43319407 Msa0329560:CDS 70.0%
TGGGACGGTTGTGGCGTGCC+AGG - chr2_4:43319387-43319406 Msa0329560:CDS 70.0%
GGGACGGTTGTGGCGTGCCA+GGG - chr2_4:43319388-43319407 Msa0329560:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 43318674 43320147 43318674 ID=Msa0329560;Name=Msa0329560
chr2_4 mRNA 43318674 43320147 43318674 ID=Msa0329560-mRNA-1;Parent=Msa0329560;Name=Msa0329560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=84|1|1|1|1|1|2|466|273
chr2_4 exon 43318674 43319903 43318674 ID=Msa0329560-mRNA-1:exon:13204;Parent=Msa0329560-mRNA-1
chr2_4 exon 43320006 43320147 43320006 ID=Msa0329560-mRNA-1:exon:13203;Parent=Msa0329560-mRNA-1
chr2_4 five_prime_UTR 43320064 43320147 43320064 ID=Msa0329560-mRNA-1:five_prime_utr;Parent=Msa0329560-mRNA-1
chr2_4 CDS 43320006 43320063 43320006 ID=Msa0329560-mRNA-1:cds;Parent=Msa0329560-mRNA-1
chr2_4 CDS 43319140 43319903 43319140 ID=Msa0329560-mRNA-1:cds;Parent=Msa0329560-mRNA-1
chr2_4 three_prime_UTR 43318674 43319139 43318674 ID=Msa0329560-mRNA-1:three_prime_utr;Parent=Msa0329560-mRNA-1
Gene Sequence

>Msa0329560

ATGGTTGAGCCAATGTCATTTTTGTTCTTCTTCACACTTCATCTATCAATAACTTCAGTGGTATTTTCAGCGGAATTCACTATAGTTAACAATTGCAACTATACGGTTTGGCCAGCTTCACATACTACTAGTGGAAATAGTGGCAATGCAACATTAGCAACCACCGGATTCATGTTAAAACCCCGTGAGAATTCAACAATTACAGCGCCTGCCAAATGGACTGGTCATTTCTGGGGACGGACTCTCTGTACAGATTCTGTCTCCAAAAACTTCTCCTGTGTCACGGGTGACTGTGGATCCGGCAAAGTAGCATGTGATGGCCGCAGCGGATCACCGCCTTTGACACTGGCGAAAATCTCTCTGGACAGTGCTAACAATCAAGATTTTTATGATGTCAGCTTAGTAGACGGTTATAATGTCCCGATGGAAATTGTTCCGTTAGGTGGTTCCGGTAAGTCATGTAACAGCACGGGTTGTCCTACAGATTTGAACGCGGTATGTCCAACGGAGTTGAAAGTAACAAAAAATGGGACGGTTGTGGCGTGCCAGGGTCCTTGTGCTGCTTTTAATTTGCAGTTTTTCTGTTGCGTTGGGAATCATTCAGGTCCAAATACTTGTGAGCCAAGTGTGTATGCTAAGATATTCAAGACAACGTGCCCTCAAGCCTATAGCTATGCGTATGATGATCAGACCAGCACGTTCACTTGTCCGGCCACCGATTATCACGTTGTTTTTTGTCCTGCCTCAAATAATGCCAGGTTAGATACTAATACTAATAATAGTTCAAAATATTTTTCATGTCATTTTATATTTATAAAATAG
Protein sequence

>Msa0329560

MVEPMSFLFFFTLHLSITSVVFSAEFTIVNNCNYTVWPASHTTSGNSGNATLATTGFMLKPRENSTITAPAKWTGHFWGRTLCTDSVSKNFSCVTGDCGSGKVACDGRSGSPPLTLAKISLDSANNQDFYDVSLVDGYNVPMEIVPLGGSGKSCNSTGCPTDLNAVCPTELKVTKNGTVVACQGPCAAFNLQFFCCVGNHSGPNTCEPSVYAKIFKTTCPQAYSYAYDDQTSTFTCPATDYHVVFCPASNNARLDTNTNNSSKYFSCHFIFIK*