AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0213200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0213200 MtrunA17_Chr2g0312921 95.973 298 10 2 1 296 1 298 0.0 584
Msa0213200 MtrunA17_Chr8g0344401 39.171 217 122 4 89 295 17 233 4.45e-47 157
Msa0213200 MtrunA17_Chr4g0044581 39.171 217 122 4 89 295 29 245 4.07e-46 155
Msa0213200 MtrunA17_Chr4g0051041 38.914 221 122 5 86 294 8 227 4.54e-45 152
Msa0213200 MtrunA17_Chr4g0053031 37.500 224 116 6 89 295 30 246 3.37e-43 148
Msa0213200 MtrunA17_Chr4g0053241 38.496 226 111 7 89 295 30 246 3.12e-41 143
Msa0213200 MtrunA17_Chr4g0053331 37.445 227 112 9 89 295 25 241 3.75e-41 142
Msa0213200 MtrunA17_Chr8g0389361 40.741 216 119 4 89 295 23 238 6.43e-41 142
Msa0213200 MtrunA17_Chr6g0487981 36.111 216 129 3 89 295 21 236 2.01e-40 140
Msa0213200 MtrunA17_Chr4g0053021 36.000 225 118 7 89 295 28 244 2.03e-40 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0213200 AT3G62000.1 75.099 253 60 1 47 296 26 278 1.61e-141 400
Msa0213200 AT3G62000.2 73.859 241 60 1 47 284 26 266 2.22e-129 372
Msa0213200 AT3G61990.1 75.877 228 52 1 69 296 66 290 4.28e-124 356
Msa0213200 AT4G26220.1 42.009 219 112 4 89 295 15 230 3.82e-52 171
Msa0213200 AT4G34050.1 39.631 217 121 4 89 295 41 257 1.52e-47 160
Msa0213200 AT4G34050.3 39.631 217 121 4 89 295 68 284 3.15e-47 160
Msa0213200 AT1G67990.1 39.171 217 121 4 89 295 16 231 2.51e-45 153
Msa0213200 AT1G67980.1 38.710 217 121 4 89 295 16 230 3.91e-45 153
Msa0213200 AT1G24735.1 35.484 217 130 3 89 295 22 238 3.19e-41 143
Msa0213200 AT1G24735.3 35.789 190 117 1 111 295 4 193 8.02e-39 135
Msa0213200 AT1G24735.2 35.789 190 117 1 111 295 100 289 4.27e-38 136
Msa0213200 AT1G67980.2 32.051 156 99 2 145 295 9 162 6.97e-21 87.8
Msa0213200 AT4G34050.2 39.316 117 64 3 186 295 30 146 1.13e-20 86.7

Find 99 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTGCAATTGAACCATTC+AGG 0.256625 2_1:-55831787 Msa0213200:three_prime_UTR
GCAATGCTTGTGCAGATTCT+TGG 0.287926 2_1:-55833730 Msa0213200:CDS
GCAACTAAACGACCTGATTC+TGG 0.314053 2_1:+55833066 None:intergenic
TTGAGATTTACCGGTCTCTT+TGG 0.314458 2_1:-55831700 Msa0213200:three_prime_UTR
CATTCATAATTAGAAATTCT+AGG 0.329217 2_1:+55832809 None:intergenic
TGGTTGTATTTCAGATTCTA+AGG 0.329998 2_1:-55835205 Msa0213200:intron
AAATTGCCTTGCAGAGAAAT+TGG 0.331385 2_1:-55835739 Msa0213200:five_prime_UTR
TCTTAGAACTTGAGATTTAC+CGG 0.357191 2_1:-55831709 Msa0213200:three_prime_UTR
TATTGTATAATGGTAATTAT+AGG 0.372911 2_1:-55835659 Msa0213200:exon
AATAGATTCAGATGTGTAGA+TGG 0.376969 2_1:-55831466 Msa0213200:three_prime_UTR
TTTGATTCTCACAACATTTG+TGG 0.377153 2_1:+55831624 None:intergenic
ATTATGTTCTCGAAAATGTT+CGG 0.386238 2_1:-55835379 Msa0213200:CDS
CGAGAACATAATCATACAAC+CGG 0.392943 2_1:+55835390 None:intergenic
GCATTAGTCCTTCCAGAATC+AGG 0.399144 2_1:-55833078 Msa0213200:CDS
TTCTTCATTATGCAGTTCTC+AGG 0.409880 2_1:+55831660 None:intergenic
TTGGTGGCTTAGGTACCTAT+TGG 0.412007 2_1:-55831871 Msa0213200:intron
TCTTTGAGCTTTACTAGTAC+TGG 0.412893 2_1:+55835514 None:intergenic
TTATGTTCTCGAAAATGTTC+GGG 0.415226 2_1:-55835378 Msa0213200:CDS
ATAATAGGTGTCTCCTGATC+AGG 0.424494 2_1:-55833764 Msa0213200:intron
CTAGAATTTCTAATTATGAA+TGG 0.426859 2_1:-55832808 Msa0213200:CDS
GCTTGCTGGTGTTTCACATA+AGG 0.430882 2_1:-55832995 Msa0213200:intron
AAGAAGTATTATCAGCTTGC+TGG 0.435455 2_1:-55833009 Msa0213200:CDS
GCCAGTAGTTGTGCCTGATC+AGG 0.436714 2_1:+55833751 None:intergenic
TCTATGTATAAAGCTACAAA+AGG 0.436800 2_1:+55835854 None:intergenic
ATTGCTAGTGATGAAAAGTA+TGG 0.438769 2_1:-55835440 Msa0213200:CDS
TCCTGATCAGGCACAACTAC+TGG 0.443207 2_1:-55833752 Msa0213200:CDS
ATTAACTTGGTGTTTCATCA+TGG 0.444634 2_1:-55835620 Msa0213200:CDS
TAATTTGAATTATGCAACTT+GGG 0.452966 2_1:-55835543 Msa0213200:CDS
TTGTAATTGATAATGTCCTT+TGG 0.454375 2_1:-55832160 Msa0213200:CDS
CTCTAAAATTGAAATGATGA+TGG 0.456173 2_1:-55835924 Msa0213200:five_prime_UTR
CTTGCAGAGAAATTGGCAAA+AGG 0.457524 2_1:-55835732 Msa0213200:five_prime_UTR
CCATTGGATGGATAACATAC+AGG 0.460954 2_1:-55831542 Msa0213200:three_prime_UTR
AAGAGAGTTACGTGGAAGAT+AGG 0.465396 2_1:-55835688 Msa0213200:five_prime_UTR
ATGAGAATGTTTCCATTGGA+TGG 0.468886 2_1:-55831554 Msa0213200:three_prime_UTR
TAAGCGTGTAAGCATCAGTA+TGG 0.471614 2_1:-55831985 Msa0213200:intron
ATTGTCATCCCATCTCCAAT+AGG 0.475142 2_1:+55831856 None:intergenic
CTTAGCAACATCAAGAGATC+TGG 0.475859 2_1:+55833029 None:intergenic
TTGCAGAGAAATTGGCAAAA+GGG 0.478046 2_1:-55835731 Msa0213200:five_prime_UTR
CATTGCAATTGAACCATTCA+GGG 0.480710 2_1:-55831786 Msa0213200:three_prime_UTR
CTAATTATGAATGGTGAAGC+TGG 0.488384 2_1:-55832799 Msa0213200:CDS
AGTAAAGCTCAAAGATTGAA+AGG 0.493916 2_1:-55835506 Msa0213200:CDS
TGATGGGAGATACCTGCATC+TGG 0.495028 2_1:+55835147 None:intergenic
CTGTTGCAGGTGAGGATTGG+AGG 0.496022 2_1:-55832188 Msa0213200:intron
GCTTGAACTGAATCTTATAG+AGG 0.497638 2_1:+55835882 None:intergenic
TAGGTCGGTGTATTGTATAA+TGG 0.502343 2_1:-55835669 Msa0213200:exon
ATTCATAATTAGAAATTCTA+GGG 0.503168 2_1:+55832810 None:intergenic
GCTTAGGTACCTATTGGAGA+TGG 0.503427 2_1:-55831865 Msa0213200:intron
TACTAGGTGGATGTAAAACT+TGG 0.505836 2_1:-55832847 Msa0213200:intron
TTAACTTGGTGTTTCATCAT+GGG 0.511784 2_1:-55835619 Msa0213200:CDS
GACAAATAGTAGCATTAACT+TGG 0.515595 2_1:-55835633 Msa0213200:CDS
GATGGATAACATACAGGTGC+AGG 0.516029 2_1:-55831536 Msa0213200:three_prime_UTR
TTAATTTGAATTATGCAACT+TGG 0.516265 2_1:-55835544 Msa0213200:CDS
TATAAAGCTACAAAAGGGTA+AGG 0.520044 2_1:+55835860 None:intergenic
ATAAGTATAACTACCCTGAA+TGG 0.522769 2_1:+55831773 None:intergenic
CAAATGTTGTGAGAATCAAA+TGG 0.526988 2_1:-55831621 Msa0213200:three_prime_UTR
GCAGAACGGTGTATTGAAGT+TGG 0.528745 2_1:-55833706 Msa0213200:CDS
CACATCTGAATCTATTTCCC+AGG 0.533699 2_1:+55831473 None:intergenic
TATAATGAGAATGTTTCCAT+TGG 0.535762 2_1:-55831558 Msa0213200:three_prime_UTR
CTTGAACTGAATCTTATAGA+GGG 0.541705 2_1:+55835883 None:intergenic
TCTTTGGCTGACCTTGCGGA+AGG 0.543119 2_1:-55831684 Msa0213200:three_prime_UTR
GTAAAGCTCAAAGATTGAAA+GGG 0.544679 2_1:-55835505 Msa0213200:CDS
GCAATTTCACAAACACTTGG+TGG 0.544952 2_1:+55835755 None:intergenic
GTGCTGTTGCAGGTGAGGAT+TGG 0.549400 2_1:-55832191 Msa0213200:intron
TATGCATGGAAGCCAGATGC+AGG 0.552563 2_1:-55835159 Msa0213200:intron
AGATCTGGCATCTCTTTCAC+AGG 0.558087 2_1:+55833044 None:intergenic
ATTGATAATGTCCTTTGGCA+TGG 0.562307 2_1:-55832155 Msa0213200:CDS
TGGAAAAGTTGCTGATCCAT+TGG 0.563254 2_1:-55832135 Msa0213200:intron
CTTAGGTACCTATTGGAGAT+GGG 0.563487 2_1:-55831864 Msa0213200:intron
CCTGTATGTTATCCATCCAA+TGG 0.567400 2_1:+55831542 None:intergenic
TGAAAAGTATGGCAATAAGC+AGG 0.568686 2_1:-55835429 Msa0213200:CDS
GCAAGGTCAGCCAAAGAGAC+CGG 0.570499 2_1:+55831690 None:intergenic
AGCAATAACGACCTCACCGA+TGG 0.573827 2_1:+55835457 None:intergenic
AATTTGAATTATGCAACTTG+GGG 0.573910 2_1:-55835542 Msa0213200:CDS
CAATTTCACAAACACTTGGT+GGG 0.576133 2_1:+55835756 None:intergenic
GGTCTCTTTGGCTGACCTTG+CGG 0.576531 2_1:-55831688 Msa0213200:three_prime_UTR
TCTAAAATTGAAATGATGAT+GGG 0.579002 2_1:-55835923 Msa0213200:five_prime_UTR
TGCAGATTCTTGGAGCAGAA+CGG 0.585514 2_1:-55833720 Msa0213200:CDS
TTATGAATGGTGAAGCTGGA+AGG 0.590746 2_1:-55832795 Msa0213200:intron
AAAATTGAAATGATGATGGG+TGG 0.595679 2_1:-55835920 Msa0213200:five_prime_UTR
ATAGATTCAGATGTGTAGAT+GGG 0.598351 2_1:-55831465 Msa0213200:three_prime_UTR
CTATGTATAAAGCTACAAAA+GGG 0.600901 2_1:+55835855 None:intergenic
CTTGTAAGAAACAGTTCCAT+CGG 0.605174 2_1:-55835473 Msa0213200:CDS
AAGGCAATTTCACAAACACT+TGG 0.606245 2_1:+55835752 None:intergenic
CTGAATCTATTTCCCAGGCT+AGG 0.613420 2_1:+55831478 None:intergenic
GAGTTACGTGGAAGATAGGT+CGG 0.615102 2_1:-55835684 Msa0213200:five_prime_UTR
GCGGAGACTGCATCTATGCA+TGG 0.626495 2_1:-55835173 Msa0213200:CDS
CGAAAATGTTCGGGAACCAG+AGG 0.628168 2_1:-55835369 Msa0213200:intron
TTCAAATTAAATCTTGCACA+AGG 0.634077 2_1:+55835557 None:intergenic
GATTCTAAGGCAGTTACGAG+CGG 0.637191 2_1:-55835192 Msa0213200:CDS
AGTTCTCAGGTCCTTCCGCA+AGG 0.637239 2_1:+55831673 None:intergenic
AGTGAAGATACATGTTCATG+AGG 0.637993 2_1:+55835587 None:intergenic
GAGATGGGATGACAATCTGT+CGG 0.642936 2_1:-55831849 Msa0213200:CDS
AGGTTGTTAGTCTTACGCCC+CGG 0.659105 2_1:-55835409 Msa0213200:CDS
CTAAACGACCTGATTCTGGA+AGG 0.659892 2_1:+55833070 None:intergenic
TTGAACTGAATCTTATAGAG+GGG 0.685534 2_1:+55835884 None:intergenic
AGGAAAATAAGAGAGTTACG+TGG 0.697686 2_1:-55835696 Msa0213200:five_prime_UTR
AAGAAACAGTTCCATCGGTG+AGG 0.701250 2_1:-55835468 Msa0213200:CDS
GAGAACATAATCATACAACC+GGG 0.710659 2_1:+55835391 None:intergenic
AGAACATAATCATACAACCG+GGG 0.758190 2_1:+55835392 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTATTATTATTTTT+TGG + chr2_1:55833271-55833290 None:intergenic 0.0%
!! AACAAAAATAAAGATAAAAA+AGG + chr2_1:55831588-55831607 None:intergenic 10.0%
!!! TATATAGACTATTTTTATAT+TGG - chr2_1:55834487-55834506 Msa0213200:intron 10.0%
!! TATTGTATAATGGTAATTAT+AGG - chr2_1:55831737-55831756 Msa0213200:three_prime_UTR 15.0%
!! AAATACAATAAATCAGTAAT+GGG + chr2_1:55832071-55832090 None:intergenic 15.0%
!!! TAGTTTTAAATTGTGAAATT+TGG - chr2_1:55833473-55833492 Msa0213200:intron 15.0%
!! TAAATTGTCTTAATCTTAAT+AGG - chr2_1:55833837-55833856 Msa0213200:intron 15.0%
!! AAATTGTCTTAATCTTAATA+GGG - chr2_1:55833838-55833857 Msa0213200:intron 15.0%
!! AAATCTTTCTATATTATCAT+AGG + chr2_1:55834063-55834082 None:intergenic 15.0%
!! ATTCATAATTAGAAATTCTA+GGG + chr2_1:55834589-55834608 None:intergenic 15.0%
!! GTATTAGTAATTAGAAAAAA+TGG + chr2_1:55835447-55835466 None:intergenic 15.0%
!!! TCTAAAATTGAAATGATGAT+GGG - chr2_1:55831473-55831492 Msa0213200:three_prime_UTR 20.0%
!!! TTAATTTGAATTATGCAACT+TGG - chr2_1:55831852-55831871 Msa0213200:CDS 20.0%
!! TAATTTGAATTATGCAACTT+GGG - chr2_1:55831853-55831872 Msa0213200:CDS 20.0%
!! CAAATACAATAAATCAGTAA+TGG + chr2_1:55832072-55832091 None:intergenic 20.0%
!! AATTTGCATAACAAAATGAT+GGG + chr2_1:55832268-55832287 None:intergenic 20.0%
!! AAATTTGCATAACAAAATGA+TGG + chr2_1:55832269-55832288 None:intergenic 20.0%
!!! GAAAATTTAACTTTTTGAGT+AGG + chr2_1:55832851-55832870 None:intergenic 20.0%
!!! TTTGATTTTAGGATTTAAGT+CGG - chr2_1:55833428-55833447 Msa0213200:intron 20.0%
!!! TTTTAAATTGTGAAATTTGG+CGG - chr2_1:55833476-55833495 Msa0213200:intron 20.0%
!! TGATACATTGTCTTTATAAT+AGG - chr2_1:55833617-55833636 Msa0213200:intron 20.0%
!!! TCCTTTATTTTTAACAGTAT+AGG - chr2_1:55833728-55833747 Msa0213200:CDS 20.0%
!!! ATTATATTGTTAATTTGACC+AGG - chr2_1:55834275-55834294 Msa0213200:intron 20.0%
!!! TTATATTGTTAATTTGACCA+GGG - chr2_1:55834276-55834295 Msa0213200:intron 20.0%
!!! AGTTTTAATGTAATGATACT+AGG - chr2_1:55834533-55834552 Msa0213200:intron 20.0%
!! CATTCATAATTAGAAATTCT+AGG + chr2_1:55834590-55834609 None:intergenic 20.0%
!! CTAGAATTTCTAATTATGAA+TGG - chr2_1:55834588-55834607 Msa0213200:intron 20.0%
!! TTTGGATAAACTACTTAATT+AGG + chr2_1:55834845-55834864 None:intergenic 20.0%
!!! ATTTGATGTTTCTCTTTTTT+AGG - chr2_1:55834911-55834930 Msa0213200:intron 20.0%
!!! TTTGATGTTTCTCTTTTTTA+GGG - chr2_1:55834912-55834931 Msa0213200:intron 20.0%
!!! GCATTAGAAATTTTAATCAA+CGG - chr2_1:55835377-55835396 Msa0213200:CDS 20.0%
!!! AAATTTTAATCAACGGTTAA+TGG - chr2_1:55835384-55835403 Msa0213200:CDS 20.0%
!!! CTCTAAAATTGAAATGATGA+TGG - chr2_1:55831472-55831491 Msa0213200:three_prime_UTR 25.0%
! CTATGTATAAAGCTACAAAA+GGG + chr2_1:55831544-55831563 None:intergenic 25.0%
! TCTATGTATAAAGCTACAAA+AGG + chr2_1:55831545-55831564 None:intergenic 25.0%
! TTCAAATTAAATCTTGCACA+AGG + chr2_1:55831842-55831861 None:intergenic 25.0%
! AATTTGAATTATGCAACTTG+GGG - chr2_1:55831854-55831873 Msa0213200:CDS 25.0%
! ATTATGTTCTCGAAAATGTT+CGG - chr2_1:55832017-55832036 Msa0213200:CDS 25.0%
! CATAAGTATGTGATATCAAT+TGG - chr2_1:55832171-55832190 Msa0213200:CDS 25.0%
! TTTGATTCATCTCAAACATA+AGG + chr2_1:55832703-55832722 None:intergenic 25.0%
!! AGGTTTGTTCTAATGTTTAT+GGG + chr2_1:55832903-55832922 None:intergenic 25.0%
!! TAGGTTTGTTCTAATGTTTA+TGG + chr2_1:55832904-55832923 None:intergenic 25.0%
! TTCTTTAAACTACCAAATGT+AGG + chr2_1:55832923-55832942 None:intergenic 25.0%
!! ATTTGGTAGTTTAAAGAACA+AGG - chr2_1:55832925-55832944 Msa0213200:intron 25.0%
!! TTTGGTAGTTTAAAGAACAA+GGG - chr2_1:55832926-55832945 Msa0213200:intron 25.0%
!!! GCTAATTACCTTATTAGTTT+TGG - chr2_1:55833063-55833082 Msa0213200:CDS 25.0%
!!! TTGATTTTAGGATTTAAGTC+GGG - chr2_1:55833429-55833448 Msa0213200:intron 25.0%
!! TCAACATTTTACTTCATAGA+AGG + chr2_1:55833597-55833616 None:intergenic 25.0%
! GCCTATACTGTTAAAAATAA+AGG + chr2_1:55833732-55833751 None:intergenic 25.0%
! TATGTAGAACAAGATCTAAT+TGG + chr2_1:55833786-55833805 None:intergenic 25.0%
! ATTAGATCTTGTTCTACATA+TGG - chr2_1:55833786-55833805 Msa0213200:intron 25.0%
!! GTCTCTATAACCTTAATTTT+TGG - chr2_1:55833950-55833969 Msa0213200:intron 25.0%
! TGAGTTTCATCCAAAAATTA+AGG + chr2_1:55833963-55833982 None:intergenic 25.0%
! GTTTACTCTTTAGATTCAAA+TGG + chr2_1:55834039-55834058 None:intergenic 25.0%
! AACAATGATGTGCATATTAT+AGG - chr2_1:55834189-55834208 Msa0213200:intron 25.0%
! GATGTCAAGTTTAAAAATCT+TGG + chr2_1:55834233-55834252 None:intergenic 25.0%
! TATATTTCAAAGTGAAAGTG+TGG + chr2_1:55834471-55834490 None:intergenic 25.0%
! ATTAAAACTTCAGAGAATTC+AGG + chr2_1:55834522-55834541 None:intergenic 25.0%
! TTTAATGTAATGATACTAGG+TGG - chr2_1:55834536-55834555 Msa0213200:intron 25.0%
!! AATAAGTTGAAAACAGCTTA+TGG + chr2_1:55834720-55834739 None:intergenic 25.0%
! ATTAAGTAGTTTATCCAAAC+AGG - chr2_1:55834846-55834865 Msa0213200:intron 25.0%
! TTAAGTAGTTTATCCAAACA+GGG - chr2_1:55834847-55834866 Msa0213200:intron 25.0%
! CATTTATTGATGCTGAAAAA+AGG - chr2_1:55835042-55835061 Msa0213200:intron 25.0%
! TATTACAGATTGAACAATGT+TGG + chr2_1:55835124-55835143 None:intergenic 25.0%
!!! TTGTAATTGATAATGTCCTT+TGG - chr2_1:55835236-55835255 Msa0213200:intron 25.0%
!! ATATGATATATCGTCTCTTT+TGG - chr2_1:55835506-55835525 Msa0213200:CDS 25.0%
! TATAATGAGAATGTTTCCAT+TGG - chr2_1:55835838-55835857 Msa0213200:intron 25.0%
!! AAAATTGAAATGATGATGGG+TGG - chr2_1:55831476-55831495 Msa0213200:three_prime_UTR 30.0%
TTGAACTGAATCTTATAGAG+GGG + chr2_1:55831515-55831534 None:intergenic 30.0%
CTTGAACTGAATCTTATAGA+GGG + chr2_1:55831516-55831535 None:intergenic 30.0%
TATAAAGCTACAAAAGGGTA+AGG + chr2_1:55831539-55831558 None:intergenic 30.0%
TGTTGTATGTATATATCAGC+TGG - chr2_1:55831604-55831623 Msa0213200:three_prime_UTR 30.0%
GACAAATAGTAGCATTAACT+TGG - chr2_1:55831763-55831782 Msa0213200:three_prime_UTR 30.0%
!! ATTAACTTGGTGTTTCATCA+TGG - chr2_1:55831776-55831795 Msa0213200:three_prime_UTR 30.0%
!! TTAACTTGGTGTTTCATCAT+GGG - chr2_1:55831777-55831796 Msa0213200:three_prime_UTR 30.0%
AGTAAAGCTCAAAGATTGAA+AGG - chr2_1:55831890-55831909 Msa0213200:intron 30.0%
GTAAAGCTCAAAGATTGAAA+GGG - chr2_1:55831891-55831910 Msa0213200:intron 30.0%
ATTGCTAGTGATGAAAAGTA+TGG - chr2_1:55831956-55831975 Msa0213200:intron 30.0%
TTATGTTCTCGAAAATGTTC+GGG - chr2_1:55832018-55832037 Msa0213200:CDS 30.0%
TGGTTGTATTTCAGATTCTA+AGG - chr2_1:55832191-55832210 Msa0213200:intron 30.0%
TGTACAAACGTCAAACAATT+TGG + chr2_1:55832314-55832333 None:intergenic 30.0%
! ATTCAAAACTACTAGTTTCC+TGG + chr2_1:55832496-55832515 None:intergenic 30.0%
!!! AACTAGTAGTTTTGAATCAG+TGG - chr2_1:55832499-55832518 Msa0213200:intron 30.0%
TCTGCATATTCATAGTTACA+AGG + chr2_1:55832549-55832568 None:intergenic 30.0%
TTATGAGATAGAAGCTTTCA+AGG + chr2_1:55832579-55832598 None:intergenic 30.0%
CTGTTGCTCAATTATAAGAT+AGG + chr2_1:55832668-55832687 None:intergenic 30.0%
TCATCTCAAACATAAGGATA+GGG + chr2_1:55832697-55832716 None:intergenic 30.0%
TTCATCTCAAACATAAGGAT+AGG + chr2_1:55832698-55832717 None:intergenic 30.0%
! GGTTTGTTCTAATGTTTATG+GGG + chr2_1:55832902-55832921 None:intergenic 30.0%
CATTAGAACAAACCTACATT+TGG - chr2_1:55832908-55832927 Msa0213200:intron 30.0%
GTAATTAGCAATCAAATACC+AGG + chr2_1:55832969-55832988 None:intergenic 30.0%
GTACTGCAAAAAATGTATCT+TGG + chr2_1:55833025-55833044 None:intergenic 30.0%
TAATTAGCAATCAAATACGC+GGG + chr2_1:55833051-55833070 None:intergenic 30.0%
GTAATTAGCAATCAAATACG+CGG + chr2_1:55833052-55833071 None:intergenic 30.0%
AAAATCGCAATCAAAATCGA+AGG - chr2_1:55833174-55833193 Msa0213200:intron 30.0%
! AAATCGAAGGATTTTACTCA+TGG - chr2_1:55833187-55833206 Msa0213200:intron 30.0%
! GACTTTTGTAGAATCGATAT+AGG - chr2_1:55833209-55833228 Msa0213200:intron 30.0%
AAAATCGCAATCAAAATCGA+TGG - chr2_1:55833174-55833193 Msa0213200:intron 30.0%
!! GTCGCAAAATCTTTGATTTT+AGG - chr2_1:55833417-55833436 Msa0213200:intron 30.0%
AATATGTATGTGATACCCTT+TGG - chr2_1:55833991-55834010 Msa0213200:intron 30.0%
ATAACAAATGTGACTCCAAA+GGG + chr2_1:55834009-55834028 None:intergenic 30.0%
TATAACAAATGTGACTCCAA+AGG + chr2_1:55834010-55834029 None:intergenic 30.0%
TCTTTGCAGATTATGATGAA+CGG - chr2_1:55834110-55834129 Msa0213200:intron 30.0%
TCTTTCTTTAGTAACTGATG+AGG - chr2_1:55834251-55834270 Msa0213200:intron 30.0%
! GTTATGCTTTTGATCTCATA+AGG - chr2_1:55834428-55834447 Msa0213200:intron 30.0%
AAGTGTGGAACTACAAATAT+TGG + chr2_1:55834456-55834475 None:intergenic 30.0%
TCAAATAAGCTAGTTGAAAC+AGG + chr2_1:55834654-55834673 None:intergenic 30.0%
!! CTTATTTTCGTAAGCTATCT+AGG - chr2_1:55834734-55834753 Msa0213200:intron 30.0%
AAAGTCATAGCTGCATAAAA+AGG + chr2_1:55835021-55835040 None:intergenic 30.0%
!! TTTTGGGAAACATAGTTAGA+AGG + chr2_1:55835159-55835178 None:intergenic 30.0%
! GAACTGGTATAACAACTTTT+GGG + chr2_1:55835175-55835194 None:intergenic 30.0%
! TGAACTGGTATAACAACTTT+TGG + chr2_1:55835176-55835195 None:intergenic 30.0%
! TCGTATTTGTTCGTTATTTC+CGG - chr2_1:55835297-55835316 Msa0213200:intron 30.0%
AATACACTTCCAATACACTT+AGG - chr2_1:55835462-55835481 Msa0213200:CDS 30.0%
ATACACTTCCAATACACTTA+GGG - chr2_1:55835463-55835482 Msa0213200:CDS 30.0%
ATAAGTATAACTACCCTGAA+TGG + chr2_1:55835626-55835645 None:intergenic 30.0%
TCTTAGAACTTGAGATTTAC+CGG - chr2_1:55835687-55835706 Msa0213200:five_prime_UTR 30.0%
TTTGATTCTCACAACATTTG+TGG + chr2_1:55835775-55835794 None:intergenic 30.0%
CAAATGTTGTGAGAATCAAA+TGG - chr2_1:55835775-55835794 Msa0213200:intron 30.0%
AATAGATTCAGATGTGTAGA+TGG - chr2_1:55835930-55835949 Msa0213200:five_prime_UTR 30.0%
GCTTGAACTGAATCTTATAG+AGG + chr2_1:55831517-55831536 None:intergenic 35.0%
CAATTTCACAAACACTTGGT+GGG + chr2_1:55831643-55831662 None:intergenic 35.0%
AAGGCAATTTCACAAACACT+TGG + chr2_1:55831647-55831666 None:intergenic 35.0%
AAATTGCCTTGCAGAGAAAT+TGG - chr2_1:55831657-55831676 Msa0213200:three_prime_UTR 35.0%
TTGCAGAGAAATTGGCAAAA+GGG - chr2_1:55831665-55831684 Msa0213200:three_prime_UTR 35.0%
!! CAAAAGGGCTTTTGAGAATA+AGG - chr2_1:55831680-55831699 Msa0213200:three_prime_UTR 35.0%
AGGAAAATAAGAGAGTTACG+TGG - chr2_1:55831700-55831719 Msa0213200:three_prime_UTR 35.0%
TAGGTCGGTGTATTGTATAA+TGG - chr2_1:55831727-55831746 Msa0213200:three_prime_UTR 35.0%
AGTGAAGATACATGTTCATG+AGG + chr2_1:55831812-55831831 None:intergenic 35.0%
TCTTTGAGCTTTACTAGTAC+TGG + chr2_1:55831885-55831904 None:intergenic 35.0%
CTTGTAAGAAACAGTTCCAT+CGG - chr2_1:55831923-55831942 Msa0213200:intron 35.0%
! TGAAAAGTATGGCAATAAGC+AGG - chr2_1:55831967-55831986 Msa0213200:intron 35.0%
AGAACATAATCATACAACCG+GGG + chr2_1:55832007-55832026 None:intergenic 35.0%
GAGAACATAATCATACAACC+GGG + chr2_1:55832008-55832027 None:intergenic 35.0%
CGAGAACATAATCATACAAC+CGG + chr2_1:55832009-55832028 None:intergenic 35.0%
TTTGCAAGATTCTGATTCCA+TGG - chr2_1:55832115-55832134 Msa0213200:intron 35.0%
CTTATGCTCGAAAAACACAA+GGG + chr2_1:55832157-55832176 None:intergenic 35.0%
ACTTATGCTCGAAAAACACA+AGG + chr2_1:55832158-55832177 None:intergenic 35.0%
TATTCACACAGTTCACTCAT+TGG - chr2_1:55832288-55832307 Msa0213200:intron 35.0%
CATGAAAATCTATACTGACC+AGG - chr2_1:55832475-55832494 Msa0213200:intron 35.0%
!!! TAGTTTTGAATCAGTGGAGT+TGG - chr2_1:55832505-55832524 Msa0213200:intron 35.0%
!!! GGAGTTGGTTTTGAACATAT+TGG - chr2_1:55832520-55832539 Msa0213200:intron 35.0%
GGATATGATTGGATAAGAGT+AGG - chr2_1:55832614-55832633 Msa0213200:intron 35.0%
TGATTGGATAAGAGTAGGAT+AGG - chr2_1:55832619-55832638 Msa0213200:intron 35.0%
GATTGGATAAGAGTAGGATA+GGG - chr2_1:55832620-55832639 Msa0213200:intron 35.0%
GACAGACACCAAAACTAATA+AGG + chr2_1:55833074-55833093 None:intergenic 35.0%
TCAATATCTTGTCCATGCTA+TGG - chr2_1:55833094-55833113 Msa0213200:CDS 35.0%
CATGCTATGGTTGTCAAAAT+CGG - chr2_1:55833107-55833126 Msa0213200:intron 35.0%
ATGCTATGGTTGTCAAAATC+GGG - chr2_1:55833108-55833127 Msa0213200:intron 35.0%
TCGAAAGGGAATAGCAAAAT+CGG - chr2_1:55833144-55833163 Msa0213200:intron 35.0%
CTGTAAACTCGCAATCAAAA+TGG - chr2_1:55833235-55833254 Msa0213200:intron 35.0%
AAACTCGCAATCAAAATGGA+TGG - chr2_1:55833239-55833258 Msa0213200:intron 35.0%
!! TCGATGGATTTTGCTTAGTT+TGG - chr2_1:55833356-55833375 Msa0213200:intron 35.0%
!! CGATGGATTTTGCTTAGTTT+GGG - chr2_1:55833357-55833376 Msa0213200:intron 35.0%
! CTTAGTTTGGGATTCTACTA+TGG - chr2_1:55833369-55833388 Msa0213200:intron 35.0%
CTATGGATTTAAGTCGTTGA+AGG - chr2_1:55833386-55833405 Msa0213200:intron 35.0%
TTACTTCATAGAAGGCAAGT+GGG + chr2_1:55833589-55833608 None:intergenic 35.0%
TTTACTTCATAGAAGGCAAG+TGG + chr2_1:55833590-55833609 None:intergenic 35.0%
ATAGTTATTCAATGCCGTGT+GGG + chr2_1:55833904-55833923 None:intergenic 35.0%
! TCTGAAGAGTACACAAATGA+AGG + chr2_1:55833930-55833949 None:intergenic 35.0%
!! AAGAAGTATTATCAGCTTGC+TGG - chr2_1:55834387-55834406 Msa0213200:intron 35.0%
TACTAGGTGGATGTAAAACT+TGG - chr2_1:55834549-55834568 Msa0213200:intron 35.0%
CTAATTATGAATGGTGAAGC+TGG - chr2_1:55834597-55834616 Msa0213200:intron 35.0%
!! ATTGATAATGTCCTTTGGCA+TGG - chr2_1:55835241-55835260 Msa0213200:intron 35.0%
CTGATCCATTGGTGAATAAA+TGG - chr2_1:55835272-55835291 Msa0213200:intron 35.0%
AGAAGTCAAGGTCATTTAAC+CGG + chr2_1:55835319-55835338 None:intergenic 35.0%
ACATGGTACATTAGAAGTCA+AGG + chr2_1:55835331-55835350 None:intergenic 35.0%
! TGATATATCGTCTCTTTTGG+TGG - chr2_1:55835509-55835528 Msa0213200:CDS 35.0%
TCATTGCAATTGAACCATTC+AGG - chr2_1:55835609-55835628 Msa0213200:CDS 35.0%
CATTGCAATTGAACCATTCA+GGG - chr2_1:55835610-55835629 Msa0213200:CDS 35.0%
TTCTTCATTATGCAGTTCTC+AGG + chr2_1:55835739-55835758 None:intergenic 35.0%
ATGAGAATGTTTCCATTGGA+TGG - chr2_1:55835842-55835861 Msa0213200:intron 35.0%
GCAATTTCACAAACACTTGG+TGG + chr2_1:55831644-55831663 None:intergenic 40.0%
! CTTTTGCCAATTTCTCTGCA+AGG + chr2_1:55831666-55831685 None:intergenic 40.0%
CTTGCAGAGAAATTGGCAAA+AGG - chr2_1:55831664-55831683 Msa0213200:three_prime_UTR 40.0%
AAGAGAGTTACGTGGAAGAT+AGG - chr2_1:55831708-55831727 Msa0213200:three_prime_UTR 40.0%
GCAGTCATATATTCAAGCCA+TGG + chr2_1:55832135-55832154 None:intergenic 40.0%
TATGTCTTCGCTATGCAAGT+TGG - chr2_1:55832335-55832354 Msa0213200:CDS 40.0%
ATGTCTTCGCTATGCAAGTT+GGG - chr2_1:55832336-55832355 Msa0213200:CDS 40.0%
! TTGGGTTTCTACTGCACTTT+TGG - chr2_1:55832354-55832373 Msa0213200:CDS 40.0%
CTTCTATCTCATAAAGTCCC+CGG - chr2_1:55832585-55832604 Msa0213200:intron 40.0%
TCCAATCATATCCACCAAAC+CGG + chr2_1:55832607-55832626 None:intergenic 40.0%
GTTTAAAGAACAAGGGCTTC+AGG - chr2_1:55832933-55832952 Msa0213200:intron 40.0%
!! CGATTTTGACAACCATAGCA+TGG + chr2_1:55833109-55833128 None:intergenic 40.0%
CAAAATCGGGACTTTACTTC+AGG - chr2_1:55833121-55833140 Msa0213200:intron 40.0%
GACTTTACTTCAGGTCGAAA+GGG - chr2_1:55833130-55833149 Msa0213200:intron 40.0%
CGAAAGGGAATAGCAAAATC+GGG - chr2_1:55833145-55833164 Msa0213200:intron 40.0%
ATAATAGGTGTCTCCTGATC+AGG - chr2_1:55833632-55833651 Msa0213200:intron 40.0%
AGACATTCATGTAACCCACA+CGG - chr2_1:55833887-55833906 Msa0213200:intron 40.0%
CATAGTTATTCAATGCCGTG+TGG + chr2_1:55833905-55833924 None:intergenic 40.0%
CTTAGCAACATCAAGAGATC+TGG + chr2_1:55834370-55834389 None:intergenic 40.0%
TTATGAATGGTGAAGCTGGA+AGG - chr2_1:55834601-55834620 Msa0213200:intron 40.0%
TAAGCTAGTTGAAACAGGCA+CGG + chr2_1:55834649-55834668 None:intergenic 40.0%
TTGTCCTCATTAGACTGTAG+TGG - chr2_1:55834872-55834891 Msa0213200:intron 40.0%
CTCATTAGACTGTAGTGGTT+GGG - chr2_1:55834877-55834896 Msa0213200:intron 40.0%
!!! TTTTGAGATGCTACTGCAAC+TGG - chr2_1:55835079-55835098 Msa0213200:intron 40.0%
TGGAAAAGTTGCTGATCCAT+TGG - chr2_1:55835261-55835280 Msa0213200:intron 40.0%
CGAAGCCATTTATTCACCAA+TGG + chr2_1:55835280-55835299 None:intergenic 40.0%
ACTTCTAATGTACCATGTGC+AGG - chr2_1:55835333-55835352 Msa0213200:intron 40.0%
TAAGCGTGTAAGCATCAGTA+TGG - chr2_1:55835411-55835430 Msa0213200:CDS 40.0%
GAATCTCTCCCTAAGTGTAT+TGG + chr2_1:55835474-55835493 None:intergenic 40.0%
CTTAGGTACCTATTGGAGAT+GGG - chr2_1:55835532-55835551 Msa0213200:CDS 40.0%
ATTGTCATCCCATCTCCAAT+AGG + chr2_1:55835543-55835562 None:intergenic 40.0%
TTGAGATTTACCGGTCTCTT+TGG - chr2_1:55835696-55835715 Msa0213200:five_prime_UTR 40.0%
CCTGTATGTTATCCATCCAA+TGG + chr2_1:55835857-55835876 None:intergenic 40.0%
CCATTGGATGGATAACATAC+AGG - chr2_1:55835854-55835873 Msa0213200:five_prime_UTR 40.0%
!! TTTTTCTAAGAGCCTAGCCT+GGG - chr2_1:55835906-55835925 Msa0213200:five_prime_UTR 40.0%
CACATCTGAATCTATTTCCC+AGG + chr2_1:55835926-55835945 None:intergenic 40.0%
GAGTTACGTGGAAGATAGGT+CGG - chr2_1:55831712-55831731 Msa0213200:three_prime_UTR 45.0%
AAGAAACAGTTCCATCGGTG+AGG - chr2_1:55831928-55831947 Msa0213200:intron 45.0%
!! GATTCTAAGGCAGTTACGAG+CGG - chr2_1:55832204-55832223 Msa0213200:intron 45.0%
ATCTCATAAAGTCCCCGGTT+TGG - chr2_1:55832590-55832609 Msa0213200:intron 45.0%
CAATCATATCCACCAAACCG+GGG + chr2_1:55832605-55832624 None:intergenic 45.0%
CCAATCATATCCACCAAACC+GGG + chr2_1:55832606-55832625 None:intergenic 45.0%
GGACTTTACTTCAGGTCGAA+AGG - chr2_1:55833129-55833148 Msa0213200:intron 45.0%
GCAATGCTTGTGCAGATTCT+TGG - chr2_1:55833666-55833685 Msa0213200:intron 45.0%
TGCAGATTCTTGGAGCAGAA+CGG - chr2_1:55833676-55833695 Msa0213200:intron 45.0%
GCAGAACGGTGTATTGAAGT+TGG - chr2_1:55833690-55833709 Msa0213200:intron 45.0%
AATGCACCACATCAGTTGTG+CGG - chr2_1:55834148-55834167 Msa0213200:intron 45.0%
ATAGATCCGCACAACTGATG+TGG + chr2_1:55834157-55834176 None:intergenic 45.0%
GCATTAGTCCTTCCAGAATC+AGG - chr2_1:55834318-55834337 Msa0213200:intron 45.0%
CTAAACGACCTGATTCTGGA+AGG + chr2_1:55834329-55834348 None:intergenic 45.0%
GCAACTAAACGACCTGATTC+TGG + chr2_1:55834333-55834352 None:intergenic 45.0%
AGATCTGGCATCTCTTTCAC+AGG + chr2_1:55834355-55834374 None:intergenic 45.0%
! GCTTGCTGGTGTTTCACATA+AGG - chr2_1:55834401-55834420 Msa0213200:intron 45.0%
CCAACCACTACAGTCTAATG+AGG + chr2_1:55834879-55834898 None:intergenic 45.0%
CCTCATTAGACTGTAGTGGT+TGG - chr2_1:55834876-55834895 Msa0213200:intron 45.0%
CAGCACTTCATTCAGTGAAC+TGG + chr2_1:55835191-55835210 None:intergenic 45.0%
!! ACTGAATGAAGTGCTGTTGC+AGG - chr2_1:55835195-55835214 Msa0213200:intron 45.0%
! CAGCAACTTTTCCATGCCAA+AGG + chr2_1:55835255-55835274 None:intergenic 45.0%
!! TAGTGTCACTTACCTGCACA+TGG + chr2_1:55835348-55835367 None:intergenic 45.0%
ACACTTAGGGAGAGATTCTC+AGG - chr2_1:55835476-55835495 Msa0213200:CDS 45.0%
!! ATCGTCTCTTTTGGTGGCTT+AGG - chr2_1:55835515-55835534 Msa0213200:CDS 45.0%
! TTGGTGGCTTAGGTACCTAT+TGG - chr2_1:55835525-55835544 Msa0213200:CDS 45.0%
GCTTAGGTACCTATTGGAGA+TGG - chr2_1:55835531-55835550 Msa0213200:CDS 45.0%
GAGATGGGATGACAATCTGT+CGG - chr2_1:55835547-55835566 Msa0213200:CDS 45.0%
GATGGATAACATACAGGTGC+AGG - chr2_1:55835860-55835879 Msa0213200:five_prime_UTR 45.0%
!! GTTTTTCTAAGAGCCTAGCC+TGG - chr2_1:55835905-55835924 Msa0213200:five_prime_UTR 45.0%
CTGAATCTATTTCCCAGGCT+AGG + chr2_1:55835921-55835940 None:intergenic 45.0%
!! AATAATAAATATGTTATAAA+TGG - chr2_1:55833280-55833299 Msa0213200:intron 5.0%
! CACAAACACTTGGTGGGCAA+TGG + chr2_1:55831637-55831656 None:intergenic 50.0%
AGCAATAACGACCTCACCGA+TGG + chr2_1:55831942-55831961 None:intergenic 50.0%
!! AGGTTGTTAGTCTTACGCCC+CGG - chr2_1:55831987-55832006 Msa0213200:CDS 50.0%
CGAAAATGTTCGGGAACCAG+AGG - chr2_1:55832027-55832046 Msa0213200:CDS 50.0%
TCTTCGTCAATCCTCACCTC+TGG + chr2_1:55832046-55832065 None:intergenic 50.0%
TATGCATGGAAGCCAGATGC+AGG - chr2_1:55832237-55832256 Msa0213200:intron 50.0%
TGATGGGAGATACCTGCATC+TGG + chr2_1:55832252-55832271 None:intergenic 50.0%
!! TCATAAAGTCCCCGGTTTGG+TGG - chr2_1:55832593-55832612 Msa0213200:intron 50.0%
!! CCCGGTTTGGTGGATATGAT+TGG - chr2_1:55832603-55832622 Msa0213200:intron 50.0%
TCCTGATCAGGCACAACTAC+TGG - chr2_1:55833644-55833663 Msa0213200:intron 50.0%
AATGAGGACAACGCCCTGTT+TGG + chr2_1:55834863-55834882 None:intergenic 50.0%
!! ATGAAGTGCTGTTGCAGGTG+AGG - chr2_1:55835200-55835219 Msa0213200:intron 50.0%
! CACTTGGTGGGCAATGGACT+TGG + chr2_1:55831631-55831650 None:intergenic 55.0%
ATGTTCGGGAACCAGAGGTG+AGG - chr2_1:55832032-55832051 Msa0213200:CDS 55.0%
GCGGAGACTGCATCTATGCA+TGG - chr2_1:55832223-55832242 Msa0213200:intron 55.0%
GAACAAGGGCTTCAGGTGTC+TGG - chr2_1:55832940-55832959 Msa0213200:intron 55.0%
GCTTCAGGTGTCTGGTATCC+TGG - chr2_1:55832948-55832967 Msa0213200:intron 55.0%
GCCAGTAGTTGTGCCTGATC+AGG + chr2_1:55833648-55833667 None:intergenic 55.0%
TCGCTAGTGATGAGTAGCCC+TGG + chr2_1:55834296-55834315 None:intergenic 55.0%
! GTGCTGTTGCAGGTGAGGAT+TGG - chr2_1:55835205-55835224 Msa0213200:intron 55.0%
CTGTTGCAGGTGAGGATTGG+AGG - chr2_1:55835208-55835227 Msa0213200:intron 55.0%
GCAAGGTCAGCCAAAGAGAC+CGG + chr2_1:55835709-55835728 None:intergenic 55.0%
GGTCTCTTTGGCTGACCTTG+CGG - chr2_1:55835708-55835727 Msa0213200:five_prime_UTR 55.0%
TCTTTGGCTGACCTTGCGGA+AGG - chr2_1:55835712-55835731 Msa0213200:five_prime_UTR 55.0%
AGTTCTCAGGTCCTTCCGCA+AGG + chr2_1:55835726-55835745 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 55831465 55835953 55831465 ID=Msa0213200;Name=Msa0213200
chr2_1 mRNA 55831465 55835953 55831465 ID=Msa0213200-mRNA-1;Parent=Msa0213200;Name=Msa0213200-mRNA-1;_AED=0.13;_eAED=0.13;_QI=219|1|1|1|0.88|0.8|10|375|296
chr2_1 exon 55831465 55831881 55831465 ID=Msa0213200-mRNA-1:exon:15513;Parent=Msa0213200-mRNA-1
chr2_1 exon 55831986 55832063 55831986 ID=Msa0213200-mRNA-1:exon:15512;Parent=Msa0213200-mRNA-1
chr2_1 exon 55832136 55832201 55832136 ID=Msa0213200-mRNA-1:exon:15511;Parent=Msa0213200-mRNA-1
chr2_1 exon 55832318 55832387 55832318 ID=Msa0213200-mRNA-1:exon:15510;Parent=Msa0213200-mRNA-1
chr2_1 exon 55832796 55832863 55832796 ID=Msa0213200-mRNA-1:exon:15509;Parent=Msa0213200-mRNA-1
chr2_1 exon 55832996 55833121 55832996 ID=Msa0213200-mRNA-1:exon:15508;Parent=Msa0213200-mRNA-1
chr2_1 exon 55833696 55833779 55833696 ID=Msa0213200-mRNA-1:exon:15507;Parent=Msa0213200-mRNA-1
chr2_1 exon 55835160 55835213 55835160 ID=Msa0213200-mRNA-1:exon:15506;Parent=Msa0213200-mRNA-1
chr2_1 exon 55835370 55835780 55835370 ID=Msa0213200-mRNA-1:exon:15505;Parent=Msa0213200-mRNA-1
chr2_1 exon 55835843 55835953 55835843 ID=Msa0213200-mRNA-1:exon:15504;Parent=Msa0213200-mRNA-1
chr2_1 five_prime_UTR 55835843 55835953 55835843 ID=Msa0213200-mRNA-1:five_prime_utr;Parent=Msa0213200-mRNA-1
chr2_1 five_prime_UTR 55835673 55835780 55835673 ID=Msa0213200-mRNA-1:five_prime_utr;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55835370 55835672 55835370 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55835160 55835213 55835160 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55833696 55833779 55833696 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55832996 55833121 55832996 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55832796 55832863 55832796 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55832318 55832387 55832318 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55832136 55832201 55832136 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55831986 55832063 55831986 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 CDS 55831840 55831881 55831840 ID=Msa0213200-mRNA-1:cds;Parent=Msa0213200-mRNA-1
chr2_1 three_prime_UTR 55831465 55831839 55831465 ID=Msa0213200-mRNA-1:three_prime_utr;Parent=Msa0213200-mRNA-1
Gene Sequence

>Msa0213200

ATGGTAATTATAGGAATGACAAATAGTAGCATTAACTTGGTGTTTCATCATGGGTCAACATTGCCTCATGAACATGTATCTTCACTAGTGAGACCTTGTGCAAGATTTAATTTGAATTATGCAACTTGGGGTGTTACCAGTACTAGTAAAGCTCAAAGATTGAAAGGGTATAAGCAGCTTGTAAGAAACAGTTCCATCGGTGAGGTCGTTATTGCTAGTGATGAAAAGTATGGCAATAAGCAGGTTGTTAGTCTTACGCCCCGGTTGTATGATTATGTTCTCGAAAATGTTCGGGAACCAGAGATTCTAAGGCAGTTACGAGCGGAGACTGCATCTATGCATGGAAGCCAGATGCAGGTGTCTCCTGATCAGGCACAACTACTGGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGCGTTTATACTGGCTACTCATCACTAGCGATAGCATTAGTCCTTCCAGAATCAGGTCGTTTAGTTGCCTGTGAAAGAGATGCCAGATCTCTTGATGTTGCTAAGAAGTATTATCAGCTTGCTGGTGTTTCACATAAGGTGGATGTAAAACTTGGACTTGCAGCAGATTCCCTAGAATTTCTAATTATGAATGGTGAAGCTGGAAGCTATGACTTTGCATTTATTGATGCTGAAAAAAGGATGACTGAGAAATATTTTGAGATGCTACTGCAACTGGTGAGGATTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGATCCATTGGTAAGTGACACTAAAACGATCAGCATTAGAAATTTTAATCAACGGTTAATGGAAGATAAGCGTGTAAGCATCAGTATGGTACCTATTGGAGATGGGATGACAATCTGTCGGAAAAGATAA

Protein sequence

>Msa0213200

MVIIGMTNSSINLVFHHGSTLPHEHVSSLVRPCARFNLNYATWGVTSTSKAQRLKGYKQLVRNSSIGEVVIASDEKYGNKQVVSLTPRLYDYVLENVREPEILRQLRAETASMHGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDARSLDVAKKYYQLAGVSHKVDVKLGLAADSLEFLIMNGEAGSYDFAFIDAEKRMTEKYFEMLLQLVRIGGLIVIDNVLWHGKVADPLVSDTKTISIRNFNQRLMEDKRVSISMVPIGDGMTICRKR*