Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219350 | XP_003596781.2 | 94.236 | 347 | 20 | 0 | 2 | 348 | 61 | 407 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219350 | sp|Q93ZB9|FACR3_ARATH | 60.588 | 340 | 133 | 1 | 2 | 341 | 65 | 403 | 6.56e-146 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219350 | G7IRD7 | 94.236 | 347 | 20 | 0 | 2 | 348 | 61 | 407 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0219340 | Msa0219350 | 0.852364 | 4.845757e-61 | -8.615850e-47 |
| Msa0219350 | Msa0297900 | 0.844219 | 8.657729e-59 | -8.615850e-47 |
| Msa0219350 | Msa0297910 | 0.824931 | 6.178041e-54 | -8.615850e-47 |
| Msa0219350 | Msa0931620 | 0.854342 | 1.311758e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219350 | MtrunA17_Chr2g0321181 | 94.236 | 347 | 20 | 0 | 2 | 348 | 61 | 407 | 0.0 | 677 |
| Msa0219350 | MtrunA17_Chr4g0026701 | 72.647 | 340 | 93 | 0 | 2 | 341 | 62 | 401 | 0.0 | 526 |
| Msa0219350 | MtrunA17_Chr2g0321201 | 70.294 | 340 | 100 | 1 | 2 | 341 | 63 | 401 | 3.49e-177 | 501 |
| Msa0219350 | MtrunA17_Chr4g0026691 | 66.176 | 340 | 115 | 0 | 2 | 341 | 61 | 400 | 3.48e-166 | 473 |
| Msa0219350 | MtrunA17_Chr6g0465391 | 48.916 | 323 | 163 | 2 | 1 | 321 | 60 | 382 | 8.46e-106 | 318 |
| Msa0219350 | MtrunA17_Chr4g0026771 | 45.317 | 331 | 178 | 1 | 7 | 334 | 63 | 393 | 6.10e-105 | 317 |
| Msa0219350 | MtrunA17_Chr4g0026711 | 44.444 | 351 | 191 | 2 | 2 | 348 | 61 | 411 | 2.49e-103 | 313 |
| Msa0219350 | MtrunA17_Chr1g0176054 | 40.816 | 343 | 183 | 5 | 2 | 331 | 175 | 510 | 1.36e-78 | 253 |
| Msa0219350 | MtrunA17_Chr5g0419501 | 33.918 | 342 | 169 | 3 | 2 | 340 | 61 | 348 | 6.82e-61 | 199 |
| Msa0219350 | MtrunA17_Chr4g0026891 | 43.820 | 178 | 95 | 3 | 7 | 180 | 63 | 239 | 1.08e-43 | 153 |
| Msa0219350 | MtrunA17_Chr5g0431251 | 49.612 | 129 | 65 | 0 | 122 | 250 | 2 | 130 | 7.20e-43 | 146 |
| Msa0219350 | MtrunA17_Chr6g0465381 | 45.752 | 153 | 80 | 3 | 184 | 333 | 1 | 153 | 2.26e-32 | 119 |
| Msa0219350 | MtrunA17_Chr4g0026901 | 63.793 | 58 | 21 | 0 | 168 | 225 | 16 | 73 | 1.65e-22 | 90.5 |
| Msa0219350 | MtrunA17_Chr5g0431271 | 52.239 | 67 | 32 | 0 | 184 | 250 | 1 | 67 | 1.19e-20 | 86.7 |
| Msa0219350 | MtrunA17_Chr5g0431261 | 37.363 | 91 | 57 | 0 | 250 | 340 | 3 | 93 | 3.91e-15 | 70.5 |
| Msa0219350 | MtrunA17_Chr5g0431281 | 37.234 | 94 | 59 | 0 | 250 | 343 | 28 | 121 | 4.90e-15 | 73.6 |
| Msa0219350 | MtrunA17_Chr4g0026911 | 36.792 | 106 | 62 | 2 | 250 | 354 | 3 | 104 | 3.07e-14 | 70.5 |
| Msa0219350 | MtrunA17_Chr5g0431241 | 46.377 | 69 | 35 | 1 | 2 | 70 | 61 | 127 | 1.42e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219350 | AT4G33790.1 | 60.588 | 340 | 133 | 1 | 2 | 341 | 65 | 403 | 6.66e-147 | 425 |
| Msa0219350 | AT4G33790.2 | 62.543 | 291 | 108 | 1 | 51 | 341 | 1 | 290 | 2.67e-131 | 381 |
| Msa0219350 | AT5G22500.2 | 51.940 | 335 | 158 | 2 | 7 | 340 | 65 | 397 | 1.54e-126 | 370 |
| Msa0219350 | AT5G22500.1 | 51.026 | 341 | 164 | 2 | 2 | 341 | 60 | 398 | 3.45e-125 | 369 |
| Msa0219350 | AT3G44540.1 | 50.725 | 345 | 169 | 1 | 2 | 345 | 60 | 404 | 1.87e-124 | 368 |
| Msa0219350 | AT3G44550.1 | 49.854 | 343 | 168 | 3 | 2 | 341 | 60 | 401 | 5.36e-120 | 356 |
| Msa0219350 | AT3G44560.2 | 50.737 | 339 | 163 | 3 | 6 | 341 | 64 | 401 | 3.71e-112 | 333 |
| Msa0219350 | AT3G44560.3 | 50.442 | 339 | 164 | 3 | 6 | 341 | 64 | 401 | 5.86e-111 | 332 |
| Msa0219350 | AT3G44560.1 | 50.442 | 339 | 164 | 3 | 6 | 341 | 64 | 401 | 4.09e-110 | 331 |
| Msa0219350 | AT5G22420.4 | 51.342 | 298 | 140 | 2 | 56 | 353 | 6 | 298 | 8.89e-108 | 321 |
| Msa0219350 | AT3G44550.2 | 52.069 | 290 | 136 | 2 | 54 | 341 | 4 | 292 | 4.08e-107 | 320 |
| Msa0219350 | AT5G22420.1 | 48.822 | 297 | 147 | 2 | 57 | 353 | 43 | 334 | 2.55e-100 | 303 |
| Msa0219350 | AT5G22420.3 | 50.526 | 285 | 136 | 2 | 69 | 353 | 3 | 282 | 3.88e-100 | 301 |
| Msa0219350 | AT5G22420.6 | 50.526 | 285 | 136 | 2 | 69 | 353 | 3 | 282 | 3.88e-100 | 301 |
| Msa0219350 | AT3G44540.2 | 51.984 | 252 | 120 | 1 | 2 | 252 | 60 | 311 | 5.66e-92 | 278 |
| Msa0219350 | AT3G44540.3 | 51.984 | 252 | 120 | 1 | 2 | 252 | 60 | 311 | 5.66e-92 | 278 |
| Msa0219350 | AT5G22420.5 | 48.594 | 249 | 123 | 2 | 105 | 353 | 4 | 247 | 2.81e-82 | 254 |
| Msa0219350 | AT3G11980.1 | 41.056 | 341 | 185 | 6 | 2 | 331 | 179 | 514 | 2.20e-77 | 250 |
| Msa0219350 | AT5G22420.2 | 48.707 | 232 | 114 | 2 | 122 | 353 | 2 | 228 | 2.41e-77 | 241 |
| Msa0219350 | AT5G22420.7 | 48.707 | 232 | 114 | 2 | 122 | 353 | 2 | 228 | 2.41e-77 | 241 |
| Msa0219350 | AT3G56700.2 | 36.340 | 377 | 213 | 6 | 2 | 362 | 132 | 497 | 3.54e-69 | 227 |
| Msa0219350 | AT3G56700.1 | 33.952 | 377 | 201 | 7 | 2 | 362 | 132 | 476 | 3.91e-58 | 197 |
Find 80 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTACTTGCTTCCTTTAA+AGG | 0.109660 | 2_1:+66909534 | Msa0219350:CDS |
| TTTATTAGAGCTACTAAATA+TGG | 0.217777 | 2_1:+66908529 | Msa0219350:intron |
| AAGTAATTAAGTACCTTTAA+AGG | 0.225958 | 2_1:-66909547 | None:intergenic |
| GGAGAAATTGAATCAATTTC+AGG | 0.252213 | 2_1:+66908345 | Msa0219350:CDS |
| CGCTACGGTGTGTCACTAAA+TGG | 0.280988 | 2_1:+66908280 | Msa0219350:CDS |
| TCCAGGACTTGACATTAATA+TGG | 0.292005 | 2_1:+66908306 | Msa0219350:CDS |
| CTGAAAGTACGGTACGTAAT+TGG | 0.300474 | 2_1:-66909391 | None:intergenic |
| TAAATTGCTGAAGGAAAATC+AGG | 0.305746 | 2_1:+66905661 | Msa0219350:CDS |
| CCTTTCCCTGGATGGGTTGA+AGG | 0.316231 | 2_1:+66908670 | Msa0219350:CDS |
| GTGTGTGATATGTAGATAAT+AGG | 0.330986 | 2_1:+66905626 | Msa0219350:intron |
| TTCCATACCCAAGTCCTTCA+TGG | 0.332535 | 2_1:-66908401 | None:intergenic |
| CAAGGATGGAAAATCGATTA+AGG | 0.341341 | 2_1:+66909456 | Msa0219350:CDS |
| CTGGATGGGTTGAAGGCTTA+AGG | 0.363182 | 2_1:+66908677 | Msa0219350:CDS |
| AATGCTTGTAGAAACTTTCA+AGG | 0.385570 | 2_1:+66908591 | Msa0219350:CDS |
| TTAGTAAACACATATGTGTT+TGG | 0.387989 | 2_1:-66908556 | None:intergenic |
| GACAGTGTAGTCGTTGCTTA+TGG | 0.394920 | 2_1:+66909094 | Msa0219350:CDS |
| TAAAGAAGGCTTGAATTTGA+AGG | 0.399264 | 2_1:+66905742 | Msa0219350:CDS |
| AGCAACGACTACACTGTCTA+TGG | 0.401408 | 2_1:-66909089 | None:intergenic |
| GCATTGGGTATAAATACATT+AGG | 0.408311 | 2_1:+66905943 | Msa0219350:CDS |
| GTGCTTGTCCACGTTTCAAC+AGG | 0.413950 | 2_1:+66906012 | Msa0219350:CDS |
| GTGTCACTAAATGGAGTTCC+AGG | 0.414231 | 2_1:+66908289 | Msa0219350:CDS |
| CTTAAGCCTTCAACCCATCC+AGG | 0.415537 | 2_1:-66908676 | None:intergenic |
| TTTCCATCCTTGTTTATCAA+TGG | 0.421890 | 2_1:-66909445 | None:intergenic |
| TGCAATTATAGTAGCTATGA+TGG | 0.435605 | 2_1:+66909309 | Msa0219350:CDS |
| TTCAGATACGATGTTGCATT+GGG | 0.438035 | 2_1:+66905928 | Msa0219350:intron |
| GCAAATCTCCTCTTCTAGAA+TGG | 0.446223 | 2_1:-66905768 | None:intergenic |
| TGTCTCTGAAAAGTTGACTT+TGG | 0.454864 | 2_1:+66905703 | Msa0219350:CDS |
| ATTCAGATACGATGTTGCAT+TGG | 0.456501 | 2_1:+66905927 | Msa0219350:intron |
| TGAAGTGGCCATGAAGGACT+TGG | 0.457057 | 2_1:+66908393 | Msa0219350:CDS |
| TCCATATTAATGTCAAGTCC+TGG | 0.464243 | 2_1:-66908307 | None:intergenic |
| GGGAGGAGGACTCATATTAG+AGG | 0.478325 | 2_1:+66908249 | Msa0219350:CDS |
| CCTGGAGACATTTCTAAAGA+AGG | 0.479101 | 2_1:+66905728 | Msa0219350:CDS |
| TAGAGAACCTTTCCCTGGAT+GGG | 0.479839 | 2_1:+66908663 | Msa0219350:CDS |
| TTAGCAACATAGCTAGCTTC+CGG | 0.485475 | 2_1:+66909497 | Msa0219350:CDS |
| GAAAAGTTGACTTTGGTGCC+TGG | 0.486113 | 2_1:+66905710 | Msa0219350:CDS |
| AAAAGGAATGTGAATTGTAA+TGG | 0.487393 | 2_1:-66909587 | None:intergenic |
| AGGAAAGTTAACAAGCTTCA+TGG | 0.489678 | 2_1:+66909120 | Msa0219350:CDS |
| GCATTTACCACCATGTCTGC+TGG | 0.493984 | 2_1:-66909289 | None:intergenic |
| TAATATGGAAAAGAAATTAG+TGG | 0.500685 | 2_1:+66908321 | Msa0219350:CDS |
| AGCATATGAACATGTATCTC+CGG | 0.504087 | 2_1:-66909516 | None:intergenic |
| GGCCATGAAGGACTTGGGTA+TGG | 0.510522 | 2_1:+66908399 | Msa0219350:CDS |
| ATAGAGAACCTTTCCCTGGA+TGG | 0.514953 | 2_1:+66908662 | Msa0219350:CDS |
| CCTTCTTTAGAAATGTCTCC+AGG | 0.515347 | 2_1:-66905728 | None:intergenic |
| GTAGTCGTTGCTTATGGTAA+AGG | 0.516394 | 2_1:+66909100 | Msa0219350:CDS |
| TATGTGTTTACTAAAGCAAT+GGG | 0.517278 | 2_1:+66908565 | Msa0219350:CDS |
| ACTTATAGAGAACCTTTCCC+TGG | 0.521820 | 2_1:+66908658 | Msa0219350:CDS |
| TGTGTGATATGTAGATAATA+GGG | 0.522338 | 2_1:+66905627 | Msa0219350:intron |
| GGACTTGTTTAAATTGCTGA+AGG | 0.524442 | 2_1:+66905652 | Msa0219350:CDS |
| GATGGAAAATCGATTAAGGT+TGG | 0.528376 | 2_1:+66909460 | Msa0219350:CDS |
| TTGAATCAATTTCAGGCACA+TGG | 0.537509 | 2_1:+66908352 | Msa0219350:CDS |
| GGTTATAGTCTCTGAAAGTA+CGG | 0.548641 | 2_1:-66909402 | None:intergenic |
| TATGTGTGTGGCGAGGGAGG+AGG | 0.556285 | 2_1:+66908235 | Msa0219350:CDS |
| TGATATTGAAGTGGCCATGA+AGG | 0.557614 | 2_1:+66908387 | Msa0219350:CDS |
| GAAGGAATCCATTCTAGAAG+AGG | 0.557792 | 2_1:+66905760 | Msa0219350:CDS |
| CCTTCAACCCATCCAGGGAA+AGG | 0.559711 | 2_1:-66908670 | None:intergenic |
| GCAGCTTATGTGTGTGGCGA+GGG | 0.560041 | 2_1:+66908229 | Msa0219350:intron |
| CAACAACAAAATTTGATGAA+AGG | 0.560811 | 2_1:+66905822 | Msa0219350:CDS |
| AACTGAACATGATATTGAAG+TGG | 0.563421 | 2_1:+66908378 | Msa0219350:CDS |
| TGAGCAGATACCAGCAGACA+TGG | 0.567707 | 2_1:+66909279 | Msa0219350:intron |
| TCTATAAGTGCTAGTAACAA+TGG | 0.567851 | 2_1:-66908644 | None:intergenic |
| AAACCATTGATAAACAAGGA+TGG | 0.580526 | 2_1:+66909442 | Msa0219350:CDS |
| TTAGAGCTACTAAATATGGA+TGG | 0.583899 | 2_1:+66908533 | Msa0219350:intron |
| ATATGTGTTTACTAAAGCAA+TGG | 0.585671 | 2_1:+66908564 | Msa0219350:CDS |
| TGCAGCTTATGTGTGTGGCG+AGG | 0.595421 | 2_1:+66908228 | Msa0219350:intron |
| TTAAGCCTTCAACCCATCCA+GGG | 0.602292 | 2_1:-66908675 | None:intergenic |
| GATCATATCATATATCATGT+TGG | 0.604822 | 2_1:+66909352 | Msa0219350:CDS |
| TGATATATGATATGATCACT+AGG | 0.608722 | 2_1:-66909346 | None:intergenic |
| TAAGTGCTAGTAACAATGGT+AGG | 0.608943 | 2_1:-66908640 | None:intergenic |
| TTAGAGGATCCTCATCGCTA+CGG | 0.609694 | 2_1:+66908265 | Msa0219350:CDS |
| TACCTTGCAGCTTATGTGTG+TGG | 0.614766 | 2_1:+66908223 | Msa0219350:intron |
| TGAAGGACTTGGGTATGGAA+AGG | 0.621339 | 2_1:+66908404 | Msa0219350:CDS |
| GAAGTGGCCATGAAGGACTT+GGG | 0.622183 | 2_1:+66908394 | Msa0219350:CDS |
| GCTTATGTGTGTGGCGAGGG+AGG | 0.631650 | 2_1:+66908232 | Msa0219350:intron |
| TATACCAACCTGTTGAAACG+TGG | 0.633034 | 2_1:-66906020 | None:intergenic |
| TATGGAAAAGAAATTAGTGG+AGG | 0.640125 | 2_1:+66908324 | Msa0219350:CDS |
| TGATATGTAGATAATAGGGA+AGG | 0.651637 | 2_1:+66905631 | Msa0219350:intron |
| AAATTGCTGAAGGAAAATCA+GGG | 0.670151 | 2_1:+66905662 | Msa0219350:CDS |
| CGTAATTGGATTTCTGACAG+AGG | 0.697454 | 2_1:-66909377 | None:intergenic |
| AGTGACACACCGTAGCGATG+AGG | 0.698254 | 2_1:-66908274 | None:intergenic |
| GCAGATACCAGCAGACATGG+TGG | 0.717961 | 2_1:+66909282 | Msa0219350:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAGATATATATATTTTTTT+AGG | - | chr2_1:66904149-66904168 | None:intergenic | 10.0% |
| !!! | AATTTTGAGTTATTAATATT+CGG | + | chr2_1:66904411-66904430 | Msa0219350:intron | 10.0% |
| !! | TTATTAGTTAAATTTCATAT+AGG | + | chr2_1:66904582-66904601 | Msa0219350:intron | 10.0% |
| !!! | TTTTATTTGTTCAAATTTAT+GGG | - | chr2_1:66904648-66904667 | None:intergenic | 10.0% |
| !!! | TTTTTATTTGTTCAAATTTA+TGG | - | chr2_1:66904649-66904668 | None:intergenic | 10.0% |
| !!! | ATACTATAATATTTTTTTGA+GGG | - | chr2_1:66904780-66904799 | None:intergenic | 10.0% |
| !!! | AATACTATAATATTTTTTTG+AGG | - | chr2_1:66904781-66904800 | None:intergenic | 10.0% |
| !!! | TCAAGTAAAAATAATAATTT+TGG | - | chr2_1:66905301-66905320 | None:intergenic | 10.0% |
| !! | AAAACATTAGAATAATTAAA+AGG | + | chr2_1:66905441-66905460 | Msa0219350:intron | 10.0% |
| !! | TATAGTTAATAATAGTATAT+TGG | + | chr2_1:66906194-66906213 | Msa0219350:intron | 10.0% |
| !!! | TTTTGTATTTTATTTTGTTA+GGG | - | chr2_1:66906270-66906289 | None:intergenic | 10.0% |
| !! | TTAGTAAATGTAAATATATT+AGG | - | chr2_1:66906604-66906623 | None:intergenic | 10.0% |
| !! | TGTAAACTAATAAATTTAAA+TGG | + | chr2_1:66906661-66906680 | Msa0219350:intron | 10.0% |
| !!! | AATATGTTCATTATTTTTTT+AGG | + | chr2_1:66907508-66907527 | Msa0219350:intron | 10.0% |
| !!! | ATATGTTCATTATTTTTTTA+GGG | + | chr2_1:66907509-66907528 | Msa0219350:intron | 10.0% |
| !! | TAATAGAATAAGATATAATT+TGG | - | chr2_1:66908710-66908729 | None:intergenic | 10.0% |
| !! | AAAAAAAAACTAATATTTCT+TGG | + | chr2_1:66908903-66908922 | Msa0219350:intron | 10.0% |
| !!! | TATAATTTTTCTCTAATTTT+AGG | + | chr2_1:66908987-66909006 | Msa0219350:intron | 10.0% |
| !! | AACAAGAAAAAAAAAATATT+TGG | - | chr2_1:66909180-66909199 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTTTTCTTGTTT+TGG | + | chr2_1:66909181-66909200 | Msa0219350:intron | 10.0% |
| !! | TGATGATAATAAAATGAAAA+TGG | - | chr2_1:66903536-66903555 | None:intergenic | 15.0% |
| !! | AATGATAATCTCTAATAAAA+AGG | - | chr2_1:66903814-66903833 | None:intergenic | 15.0% |
| !! | TGTGAATTTAATGATAAATA+AGG | - | chr2_1:66903972-66903991 | None:intergenic | 15.0% |
| !!! | TTTTGGAATATAATAGTTTA+TGG | + | chr2_1:66904092-66904111 | Msa0219350:intron | 15.0% |
| !!! | TTAGATTTTAAGTGATTTTT+AGG | + | chr2_1:66904207-66904226 | Msa0219350:intron | 15.0% |
| !! | AATCTAGAAATTTATTGAAT+GGG | - | chr2_1:66904270-66904289 | None:intergenic | 15.0% |
| !! | AATACTATAGTATTATTAAG+TGG | - | chr2_1:66904751-66904770 | None:intergenic | 15.0% |
| !!! | TACTATAATATTTTTTTGAG+GGG | - | chr2_1:66904779-66904798 | None:intergenic | 15.0% |
| !! | ACATATATATAATTAAGTCA+TGG | - | chr2_1:66905056-66905075 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTATTTTGTTAG+GGG | - | chr2_1:66906269-66906288 | None:intergenic | 15.0% |
| !!! | GTTTTGTATTTTATTTTGTT+AGG | - | chr2_1:66906271-66906290 | None:intergenic | 15.0% |
| !! | AATTAAAAAAAATACACATG+TGG | - | chr2_1:66906367-66906386 | None:intergenic | 15.0% |
| !!! | CAAATTAGAGAAATTATTTT+AGG | + | chr2_1:66906951-66906970 | Msa0219350:intron | 15.0% |
| !! | TATTCACTTACATTTAAATT+GGG | - | chr2_1:66906983-66907002 | None:intergenic | 15.0% |
| !! | TTATTCACTTACATTTAAAT+TGG | - | chr2_1:66906984-66907003 | None:intergenic | 15.0% |
| !! | CTTTACACATATATATATAA+TGG | - | chr2_1:66907136-66907155 | None:intergenic | 15.0% |
| !!! | TTACTTTTTTTTTCTTTTCA+AGG | - | chr2_1:66907425-66907444 | None:intergenic | 15.0% |
| !!! | TATGTTCATTATTTTTTTAG+GGG | + | chr2_1:66907510-66907529 | Msa0219350:intron | 15.0% |
| !! | TATGTTTATATGTTATTGTA+TGG | + | chr2_1:66907537-66907556 | Msa0219350:intron | 15.0% |
| !! | TTATTGAACTAATATTTCTT+CGG | + | chr2_1:66908875-66908894 | Msa0219350:intron | 15.0% |
| !!! | TCTACTTTACTTTTTATCAA+TGG | - | chr2_1:66903597-66903616 | None:intergenic | 20.0% |
| !! | ACAACTACTTTAATAGTTTA+TGG | + | chr2_1:66904010-66904029 | Msa0219350:intron | 20.0% |
| !!! | CACTAAAACATCAAAATTTT+TGG | + | chr2_1:66904075-66904094 | Msa0219350:intron | 20.0% |
| !! | ATCTAGAAATTTATTGAATG+GGG | - | chr2_1:66904269-66904288 | None:intergenic | 20.0% |
| !! | GAATCTAGAAATTTATTGAA+TGG | - | chr2_1:66904271-66904290 | None:intergenic | 20.0% |
| !! | TCACTCTAAATATAAGTTTA+TGG | - | chr2_1:66904467-66904486 | None:intergenic | 20.0% |
| !!! | AGTATTATTAAGTGGTTTTT+AGG | - | chr2_1:66904743-66904762 | None:intergenic | 20.0% |
| !! | TATGTCTATATAAAGACATA+TGG | + | chr2_1:66904810-66904829 | Msa0219350:intron | 20.0% |
| !! | TATATAAAGACATATGGTAT+TGG | + | chr2_1:66904816-66904835 | Msa0219350:intron | 20.0% |
| !!! | ATTTCTTCCTTTATTTCAAA+TGG | + | chr2_1:66904928-66904947 | Msa0219350:intron | 20.0% |
| !! | TATTAGAACAAATATAAGCA+TGG | + | chr2_1:66905223-66905242 | Msa0219350:intron | 20.0% |
| !!! | CTTTAGTTGAATACATTTTT+TGG | - | chr2_1:66905992-66906011 | None:intergenic | 20.0% |
| !! | CAAAAAATGTATTCAACTAA+AGG | + | chr2_1:66905990-66906009 | Msa0219350:CDS | 20.0% |
| !!! | TTGTATTTTATTTTGTTAGG+GGG | - | chr2_1:66906268-66906287 | None:intergenic | 20.0% |
| !! | CACATATGTAAATATACTAT+TGG | - | chr2_1:66906632-66906651 | None:intergenic | 20.0% |
| !! | ATCAAAAAACTATCGTAATT+TGG | + | chr2_1:66906692-66906711 | Msa0219350:intron | 20.0% |
| !! | TCAAAAAACTATCGTAATTT+GGG | + | chr2_1:66906693-66906712 | Msa0219350:intron | 20.0% |
| !! | TTGTTAAAATAGATATTTGG+GGG | - | chr2_1:66906854-66906873 | None:intergenic | 20.0% |
| !! | CTTGTTAAAATAGATATTTG+GGG | - | chr2_1:66906855-66906874 | None:intergenic | 20.0% |
| !! | CCTTGTTAAAATAGATATTT+GGG | - | chr2_1:66906856-66906875 | None:intergenic | 20.0% |
| !! | ACCTTGTTAAAATAGATATT+TGG | - | chr2_1:66906857-66906876 | None:intergenic | 20.0% |
| !!! | GGAAAAATATGAAAAGTATA+GGG | + | chr2_1:66906880-66906899 | Msa0219350:intron | 20.0% |
| !!! | GAAAAATATGAAAAGTATAG+GGG | + | chr2_1:66906881-66906900 | Msa0219350:intron | 20.0% |
| !! | ATTAGGAAGACATTATTAAA+TGG | - | chr2_1:66907055-66907074 | None:intergenic | 20.0% |
| !! | TAATAATTGATGAGTGTATT+AGG | - | chr2_1:66907072-66907091 | None:intergenic | 20.0% |
| !! | ATACACTCATCAATTATTAT+CGG | + | chr2_1:66907073-66907092 | Msa0219350:intron | 20.0% |
| !! | AAAAATGATTGATGAAATCT+AGG | + | chr2_1:66907188-66907207 | Msa0219350:intron | 20.0% |
| !!! | ATTTTAAACTTCTTAACAAG+AGG | + | chr2_1:66907274-66907293 | Msa0219350:intron | 20.0% |
| !!! | TTTTAAACTTCTTAACAAGA+GGG | + | chr2_1:66907275-66907294 | Msa0219350:intron | 20.0% |
| !!! | ATTTGACTTTATTATATGGA+TGG | - | chr2_1:66907578-66907597 | None:intergenic | 20.0% |
| !!! | GAAGATTTGACTTTATTATA+TGG | - | chr2_1:66907582-66907601 | None:intergenic | 20.0% |
| !! | TCGATTCAAAAAAATATAAG+TGG | - | chr2_1:66907692-66907711 | None:intergenic | 20.0% |
| !! | AGCATATATATTTCTCAAAA+AGG | + | chr2_1:66907783-66907802 | Msa0219350:intron | 20.0% |
| !!! | ACATAATCACTAGTTTTATT+AGG | - | chr2_1:66907892-66907911 | None:intergenic | 20.0% |
| !!! | ACTACTGAAACTATTATTTT+AGG | - | chr2_1:66907924-66907943 | None:intergenic | 20.0% |
| !! | TAATATGGAAAAGAAATTAG+TGG | + | chr2_1:66908321-66908340 | Msa0219350:CDS | 20.0% |
| !! | TTTATTAGAGCTACTAAATA+TGG | + | chr2_1:66908529-66908548 | Msa0219350:intron | 20.0% |
| !! | ATTAATGAAAGTGACATTAA+TGG | + | chr2_1:66908779-66908798 | Msa0219350:intron | 20.0% |
| !! | TTATCTAACGTAATTAAAGA+TGG | + | chr2_1:66908963-66908982 | Msa0219350:intron | 20.0% |
| !! | AACTCCAAATATAAGAAAAA+TGG | - | chr2_1:66909059-66909078 | None:intergenic | 20.0% |
| !!! | GTTTTTTGGTGAAATATTTA+AGG | - | chr2_1:66909426-66909445 | None:intergenic | 20.0% |
| !! | AAGTAATTAAGTACCTTTAA+AGG | - | chr2_1:66909550-66909569 | None:intergenic | 20.0% |
| !!! | AAATCAAAACCTTTTACAAA+AGG | - | chr2_1:66909607-66909626 | None:intergenic | 20.0% |
| !!! | TTTTGTAAAAGGTTTTGATT+TGG | + | chr2_1:66909606-66909625 | Msa0219350:CDS | 20.0% |
| ! | TAAAAAGTAAAGTAGAGAAG+AGG | + | chr2_1:66903601-66903620 | Msa0219350:intron | 25.0% |
| ! | GATAGAGCACAATAATATTA+TGG | + | chr2_1:66903709-66903728 | Msa0219350:intron | 25.0% |
| ! | GATAATCTCTAATAAAAAGG+CGG | - | chr2_1:66903811-66903830 | None:intergenic | 25.0% |
| ! | AAACATCAAAAGAAAAGGAA+TGG | - | chr2_1:66903880-66903899 | None:intergenic | 25.0% |
| ! | AGCTAAAACATCAAAAGAAA+AGG | - | chr2_1:66903885-66903904 | None:intergenic | 25.0% |
| ! | GGATCTTAATTTCAACTTAA+AGG | - | chr2_1:66904311-66904330 | None:intergenic | 25.0% |
| ! | AAAATTATATGTGATCCACA+TGG | - | chr2_1:66904618-66904637 | None:intergenic | 25.0% |
| !! | ATGTGGATCACATATAATTT+TGG | + | chr2_1:66904617-66904636 | Msa0219350:intron | 25.0% |
| ! | GGAAAAAGAAAATATGATGT+AGG | - | chr2_1:66904718-66904737 | None:intergenic | 25.0% |
| !!! | TTATTAAGTGGTTTTTAGGT+AGG | - | chr2_1:66904739-66904758 | None:intergenic | 25.0% |
| ! | AATTATGATTAATGCCTTGA+TGG | - | chr2_1:66904849-66904868 | None:intergenic | 25.0% |
| !! | TCCTTTATTTCAAATGGAAT+TGG | + | chr2_1:66904934-66904953 | Msa0219350:intron | 25.0% |
| !! | CCTTTATTTCAAATGGAATT+GGG | + | chr2_1:66904935-66904954 | Msa0219350:intron | 25.0% |
| ! | AGATAAAGTTTCTTCACATT+TGG | - | chr2_1:66905132-66905151 | None:intergenic | 25.0% |
| !!! | TTTTAAGATTTTTGATGCTC+TGG | - | chr2_1:66905487-66905506 | None:intergenic | 25.0% |
| ! | AGCATCAAAAATCTTAAAAC+CGG | + | chr2_1:66905488-66905507 | Msa0219350:intron | 25.0% |
| ! | GAAAATGAGACTTATATTCA+GGG | - | chr2_1:66905514-66905533 | None:intergenic | 25.0% |
| ! | TGTGTGATATGTAGATAATA+GGG | + | chr2_1:66905627-66905646 | Msa0219350:intron | 25.0% |
| ! | CAACAACAAAATTTGATGAA+AGG | + | chr2_1:66905822-66905841 | Msa0219350:CDS | 25.0% |
| ! | TTAGAAAAAAATTACACACG+TGG | + | chr2_1:66906430-66906449 | Msa0219350:intron | 25.0% |
| !!! | CATATTTTAACCCTTTAAAG+AGG | + | chr2_1:66906782-66906801 | Msa0219350:intron | 25.0% |
| ! | CTGAAAATTACCTCTTTAAA+GGG | - | chr2_1:66906795-66906814 | None:intergenic | 25.0% |
| ! | ACTGAAAATTACCTCTTTAA+AGG | - | chr2_1:66906796-66906815 | None:intergenic | 25.0% |
| !!! | CCCAAATATCTATTTTAACA+AGG | + | chr2_1:66906853-66906872 | Msa0219350:intron | 25.0% |
| !!! | ATATCTATTTTAACAAGGTG+AGG | + | chr2_1:66906858-66906877 | Msa0219350:intron | 25.0% |
| !!! | TATCTATTTTAACAAGGTGA+GGG | + | chr2_1:66906859-66906878 | Msa0219350:intron | 25.0% |
| !! | GGGAAAAATATGAAAAGTAT+AGG | + | chr2_1:66906879-66906898 | Msa0219350:intron | 25.0% |
| ! | TGCATTCAACATATTAAAAC+AGG | - | chr2_1:66907232-66907251 | None:intergenic | 25.0% |
| ! | TTTATTCACAAAATACTTGC+AGG | - | chr2_1:66908138-66908157 | None:intergenic | 25.0% |
| ! | AATCATCTAAGTTGTACTTA+TGG | + | chr2_1:66908176-66908195 | Msa0219350:intron | 25.0% |
| ! | TTAGTAAACACATATGTGTT+TGG | - | chr2_1:66908559-66908578 | None:intergenic | 25.0% |
| ! | ATATGTGTTTACTAAAGCAA+TGG | + | chr2_1:66908564-66908583 | Msa0219350:CDS | 25.0% |
| ! | TATGTGTTTACTAAAGCAAT+GGG | + | chr2_1:66908565-66908584 | Msa0219350:CDS | 25.0% |
| !! | TCATTTTACAATTGTTACCT+AGG | + | chr2_1:66908806-66908825 | Msa0219350:intron | 25.0% |
| !!! | TCCTCCATTTTTCTTATATT+TGG | + | chr2_1:66909052-66909071 | Msa0219350:intron | 25.0% |
| ! | TCCAAATATAAGAAAAATGG+AGG | - | chr2_1:66909056-66909075 | None:intergenic | 25.0% |
| ! | ATTGTACTACTATCAATTTG+TGG | - | chr2_1:66909238-66909257 | None:intergenic | 25.0% |
| ! | TGATATATGATATGATCACT+AGG | - | chr2_1:66909349-66909368 | None:intergenic | 25.0% |
| ! | GATCATATCATATATCATGT+TGG | + | chr2_1:66909352-66909371 | Msa0219350:CDS | 25.0% |
| !!! | CTTGTTTATCAATGGTTTTT+TGG | - | chr2_1:66909440-66909459 | None:intergenic | 25.0% |
| ! | CAAAAAACCATTGATAAACA+AGG | + | chr2_1:66909438-66909457 | Msa0219350:CDS | 25.0% |
| ! | AAAAGGAATGTGAATTGTAA+TGG | - | chr2_1:66909590-66909609 | None:intergenic | 25.0% |
| !! | ATTCACATTCCTTTTGTAAA+AGG | + | chr2_1:66909595-66909614 | Msa0219350:CDS | 25.0% |
| !! | GTTTTAGTGGTTTGATCAAA+AGG | - | chr2_1:66903738-66903757 | None:intergenic | 30.0% |
| ATCAAAAGAAAAGGAATGGA+GGG | - | chr2_1:66903876-66903895 | None:intergenic | 30.0% | |
| !!! | TCTTTTGATGTTTTAGCTCT+TGG | + | chr2_1:66903887-66903906 | Msa0219350:intron | 30.0% |
| ATTCACATGTGATAAACCAA+AGG | + | chr2_1:66903985-66904004 | Msa0219350:intron | 30.0% | |
| ATTAAAGTAGTTGTGACCTT+TGG | - | chr2_1:66904004-66904023 | None:intergenic | 30.0% | |
| CTTAATTTCAACTTAAAGGC+AGG | - | chr2_1:66904307-66904326 | None:intergenic | 30.0% | |
| ! | TTTGAAACTCTAACAACGAT+AGG | - | chr2_1:66904496-66904515 | None:intergenic | 30.0% |
| ! | AGAGTATGTTTCTGTACAAA+AGG | - | chr2_1:66904559-66904578 | None:intergenic | 30.0% |
| TCGCTACAAATGAATGAAAT+GGG | - | chr2_1:66904891-66904910 | None:intergenic | 30.0% | |
| TTCGCTACAAATGAATGAAA+TGG | - | chr2_1:66904892-66904911 | None:intergenic | 30.0% | |
| ! | CCCAATTCCATTTGAAATAA+AGG | - | chr2_1:66904938-66904957 | None:intergenic | 30.0% |
| AAGCATATTGAACTTTCTTG+AGG | + | chr2_1:66904958-66904977 | Msa0219350:intron | 30.0% | |
| AGCATATTGAACTTTCTTGA+GGG | + | chr2_1:66904959-66904978 | Msa0219350:intron | 30.0% | |
| !! | AGATATGTATACTTTTTGCG+AGG | - | chr2_1:66905018-66905037 | None:intergenic | 30.0% |
| !!! | CTTGTTTAGTTTTGCAGTTT+TGG | + | chr2_1:66905083-66905102 | Msa0219350:intron | 30.0% |
| ! | TTATCTTCTTCTAAGAGCTA+AGG | + | chr2_1:66905146-66905165 | Msa0219350:intron | 30.0% |
| AAATATTCATCACCTCATTG+CGG | - | chr2_1:66905197-66905216 | None:intergenic | 30.0% | |
| AAATATAAGCATGGTCCTAA+GGG | + | chr2_1:66905232-66905251 | Msa0219350:intron | 30.0% | |
| CGAAAATGAGACTTATATTC+AGG | - | chr2_1:66905515-66905534 | None:intergenic | 30.0% | |
| GTGTGTGATATGTAGATAAT+AGG | + | chr2_1:66905626-66905645 | Msa0219350:intron | 30.0% | |
| TGATATGTAGATAATAGGGA+AGG | + | chr2_1:66905631-66905650 | Msa0219350:intron | 30.0% | |
| TAAATTGCTGAAGGAAAATC+AGG | + | chr2_1:66905661-66905680 | Msa0219350:CDS | 30.0% | |
| AAATTGCTGAAGGAAAATCA+GGG | + | chr2_1:66905662-66905681 | Msa0219350:CDS | 30.0% | |
| TAAAGAAGGCTTGAATTTGA+AGG | + | chr2_1:66905742-66905761 | Msa0219350:CDS | 30.0% | |
| AGAAATTAACGTGACACATA+AGG | - | chr2_1:66905863-66905882 | None:intergenic | 30.0% | |
| GTGTCACGTTAATTTCTTTA+TGG | + | chr2_1:66905866-66905885 | Msa0219350:intron | 30.0% | |
| GCATTGGGTATAAATACATT+AGG | + | chr2_1:66905943-66905962 | Msa0219350:CDS | 30.0% | |
| TGAAAATTACTACTCTCTGA+GGG | + | chr2_1:66906055-66906074 | Msa0219350:intron | 30.0% | |
| ! | GGTTAGACTTTTAAATGCTT+AGG | + | chr2_1:66906096-66906115 | Msa0219350:intron | 30.0% |
| ACAACTTCTTGAAACATAAG+GGG | - | chr2_1:66906237-66906256 | None:intergenic | 30.0% | |
| CACAACTTCTTGAAACATAA+GGG | - | chr2_1:66906238-66906257 | None:intergenic | 30.0% | |
| TCACAACTTCTTGAAACATA+AGG | - | chr2_1:66906239-66906258 | None:intergenic | 30.0% | |
| ! | GTTTCAAGAAGTTGTGATTT+TGG | + | chr2_1:66906242-66906261 | Msa0219350:intron | 30.0% |
| !! | TGCATTGACTTGGTTAAAAT+TGG | + | chr2_1:66906463-66906482 | Msa0219350:intron | 30.0% |
| TGCAAAAGGGGTAATATTTA+GGG | + | chr2_1:66906501-66906520 | Msa0219350:intron | 30.0% | |
| !!! | TTTTAAGACGTTGCGATTTT+GGG | - | chr2_1:66906555-66906574 | None:intergenic | 30.0% |
| TTATGTAGAAGAAAAACCAC+AGG | + | chr2_1:66906733-66906752 | Msa0219350:intron | 30.0% | |
| !! | AGGTTCAACTCTAGAAATTT+TGG | + | chr2_1:66906753-66906772 | Msa0219350:intron | 30.0% |
| ! | TTTAAAATTGTCCTCGCAAA+AGG | - | chr2_1:66906827-66906846 | None:intergenic | 30.0% |
| TATATGTTATTGTATGGCAG+AGG | + | chr2_1:66907543-66907562 | Msa0219350:intron | 30.0% | |
| ATATGTTATTGTATGGCAGA+GGG | + | chr2_1:66907544-66907563 | Msa0219350:intron | 30.0% | |
| CATGCATGTTTGAATACAAA+GGG | - | chr2_1:66907617-66907636 | None:intergenic | 30.0% | |
| ACATGCATGTTTGAATACAA+AGG | - | chr2_1:66907618-66907637 | None:intergenic | 30.0% | |
| CCACATCAAAAATTTAGTCT+TGG | - | chr2_1:66907843-66907862 | None:intergenic | 30.0% | |
| ! | CCAAGACTAAATTTTTGATG+TGG | + | chr2_1:66907840-66907859 | Msa0219350:intron | 30.0% |
| GTTAGTGTTACAAATGAACT+TGG | - | chr2_1:66907991-66908010 | None:intergenic | 30.0% | |
| CTCCATCCTATGTAAAAATA+TGG | + | chr2_1:66908069-66908088 | Msa0219350:intron | 30.0% | |
| !! | CACCATATTTTTACATAGGA+TGG | - | chr2_1:66908074-66908093 | None:intergenic | 30.0% |
| !! | AGCACACCATATTTTTACAT+AGG | - | chr2_1:66908078-66908097 | None:intergenic | 30.0% |
| !! | ATTTAGCATAAGGATTGGTT+TGG | - | chr2_1:66908106-66908125 | None:intergenic | 30.0% |
| TATGGAAAAGAAATTAGTGG+AGG | + | chr2_1:66908324-66908343 | Msa0219350:CDS | 30.0% | |
| GGAGAAATTGAATCAATTTC+AGG | + | chr2_1:66908345-66908364 | Msa0219350:CDS | 30.0% | |
| AACTGAACATGATATTGAAG+TGG | + | chr2_1:66908378-66908397 | Msa0219350:CDS | 30.0% | |
| TTAGAGCTACTAAATATGGA+TGG | + | chr2_1:66908533-66908552 | Msa0219350:intron | 30.0% | |
| AATGCTTGTAGAAACTTTCA+AGG | + | chr2_1:66908591-66908610 | Msa0219350:CDS | 30.0% | |
| TCTATAAGTGCTAGTAACAA+TGG | - | chr2_1:66908647-66908666 | None:intergenic | 30.0% | |
| ATGAAAGTGACATTAATGGT+TGG | + | chr2_1:66908783-66908802 | Msa0219350:intron | 30.0% | |
| ! | TTTTACAATTGTTACCTAGG+CGG | + | chr2_1:66908809-66908828 | Msa0219350:intron | 30.0% |
| TGCAATTATAGTAGCTATGA+TGG | + | chr2_1:66909309-66909328 | Msa0219350:CDS | 30.0% | |
| AAACCATTGATAAACAAGGA+TGG | + | chr2_1:66909442-66909461 | Msa0219350:CDS | 30.0% | |
| ! | TTTCCATCCTTGTTTATCAA+TGG | - | chr2_1:66909448-66909467 | None:intergenic | 30.0% |
| AAAGTAAAGTAGAGAAGAGG+TGG | + | chr2_1:66903604-66903623 | Msa0219350:intron | 35.0% | |
| AAAAAATGAGTTGCTGCAAG+TGG | + | chr2_1:66903632-66903651 | Msa0219350:intron | 35.0% | |
| GAAAGAATGGTTGAGAAAGA+TGG | + | chr2_1:66903667-66903686 | Msa0219350:intron | 35.0% | |
| CATCAAAAGAAAAGGAATGG+AGG | - | chr2_1:66903877-66903896 | None:intergenic | 35.0% | |
| ! | TTTATGGCGTTTTCCAACAA+GGG | + | chr2_1:66904026-66904045 | Msa0219350:intron | 35.0% |
| TTTCTCAAGTTTACCCTTGT+TGG | - | chr2_1:66904042-66904061 | None:intergenic | 35.0% | |
| TATATGTGATCCACATGGTT+TGG | - | chr2_1:66904613-66904632 | None:intergenic | 35.0% | |
| ! | GTATTGGTATATCACCATCA+AGG | + | chr2_1:66904832-66904851 | Msa0219350:intron | 35.0% |
| CAAATATAAGCATGGTCCTA+AGG | + | chr2_1:66905231-66905250 | Msa0219350:intron | 35.0% | |
| !!! | AATTTTGGTGCCACTAAGAA+TGG | - | chr2_1:66905286-66905305 | None:intergenic | 35.0% |
| ! | GGACTTGTTTAAATTGCTGA+AGG | + | chr2_1:66905652-66905671 | Msa0219350:CDS | 35.0% |
| ! | TGTCTCTGAAAAGTTGACTT+TGG | + | chr2_1:66905703-66905722 | Msa0219350:CDS | 35.0% |
| ATTCAGATACGATGTTGCAT+TGG | + | chr2_1:66905927-66905946 | Msa0219350:intron | 35.0% | |
| TTCAGATACGATGTTGCATT+GGG | + | chr2_1:66905928-66905947 | Msa0219350:intron | 35.0% | |
| GTGAAAATTACTACTCTCTG+AGG | + | chr2_1:66906054-66906073 | Msa0219350:intron | 35.0% | |
| !! | AGCTTTGACTTGGTCAAAAT+TGG | - | chr2_1:66906334-66906353 | None:intergenic | 35.0% |
| !! | TGACTTGGTTAAAATTGGTC+AGG | + | chr2_1:66906468-66906487 | Msa0219350:intron | 35.0% |
| ! | GACTTGGTTAAAATTGGTCA+GGG | + | chr2_1:66906469-66906488 | Msa0219350:intron | 35.0% |
| ACTTGGTTAAAATTGGTCAG+GGG | + | chr2_1:66906470-66906489 | Msa0219350:intron | 35.0% | |
| ! | TATTACCCCTTTTGCAGTTT+TGG | - | chr2_1:66906497-66906516 | None:intergenic | 35.0% |
| CTGCAAAAGGGGTAATATTT+AGG | + | chr2_1:66906500-66906519 | Msa0219350:intron | 35.0% | |
| GCAAAAGGGGTAATATTTAG+GGG | + | chr2_1:66906502-66906521 | Msa0219350:intron | 35.0% | |
| CAAAAGGGGTAATATTTAGG+GGG | + | chr2_1:66906503-66906522 | Msa0219350:intron | 35.0% | |
| !!! | GTTTTAAGACGTTGCGATTT+TGG | - | chr2_1:66906556-66906575 | None:intergenic | 35.0% |
| ATCGCAACGTCTTAAAACAT+AGG | + | chr2_1:66906558-66906577 | Msa0219350:intron | 35.0% | |
| TCGCAACGTCTTAAAACATA+GGG | + | chr2_1:66906559-66906578 | Msa0219350:intron | 35.0% | |
| AAACTATCGTAATTTGGGCA+AGG | + | chr2_1:66906698-66906717 | Msa0219350:intron | 35.0% | |
| !! | AATTTCTAGAGTTGAACCTG+TGG | - | chr2_1:66906752-66906771 | None:intergenic | 35.0% |
| !! | GTCTCGAATGAAAGTTTTGA+AGG | - | chr2_1:66907336-66907355 | None:intergenic | 35.0% |
| ! | TGTTTTATGTCCATGCAAGT+AGG | + | chr2_1:66907810-66907829 | Msa0219350:intron | 35.0% |
| ! | GTTTTATGTCCATGCAAGTA+GGG | + | chr2_1:66907811-66907830 | Msa0219350:intron | 35.0% |
| ! | TTTTATGTCCATGCAAGTAG+GGG | + | chr2_1:66907812-66907831 | Msa0219350:intron | 35.0% |
| GTAACACTAACAGTTGCTAA+CGG | + | chr2_1:66908000-66908019 | Msa0219350:intron | 35.0% | |
| TAACACTAACAGTTGCTAAC+GGG | + | chr2_1:66908001-66908020 | Msa0219350:intron | 35.0% | |
| ACCAATCCTTATGCTAAATC+CGG | + | chr2_1:66908107-66908126 | Msa0219350:intron | 35.0% | |
| TCCAGGACTTGACATTAATA+TGG | + | chr2_1:66908306-66908325 | Msa0219350:CDS | 35.0% | |
| TCCATATTAATGTCAAGTCC+TGG | - | chr2_1:66908310-66908329 | None:intergenic | 35.0% | |
| TTGAATCAATTTCAGGCACA+TGG | + | chr2_1:66908352-66908371 | Msa0219350:CDS | 35.0% | |
| TAAGTGCTAGTAACAATGGT+AGG | - | chr2_1:66908643-66908662 | None:intergenic | 35.0% | |
| AGGAAAGTTAACAAGCTTCA+TGG | + | chr2_1:66909120-66909139 | Msa0219350:CDS | 35.0% | |
| ! | GGTTATAGTCTCTGAAAGTA+CGG | - | chr2_1:66909405-66909424 | None:intergenic | 35.0% |
| CAAGGATGGAAAATCGATTA+AGG | + | chr2_1:66909456-66909475 | Msa0219350:CDS | 35.0% | |
| GATGGAAAATCGATTAAGGT+TGG | + | chr2_1:66909460-66909479 | Msa0219350:CDS | 35.0% | |
| AGCATATGAACATGTATCTC+CGG | - | chr2_1:66909519-66909538 | None:intergenic | 35.0% | |
| ! | ATGCTACTTGCTTCCTTTAA+AGG | + | chr2_1:66909534-66909553 | Msa0219350:CDS | 35.0% |
| TAAAGTAGAGAAGAGGTGGT+GGG | + | chr2_1:66903608-66903627 | Msa0219350:intron | 40.0% | |
| AGAATGGTTGAGAAAGATGG+TGG | + | chr2_1:66903670-66903689 | Msa0219350:intron | 40.0% | |
| GAATGGTTGAGAAAGATGGT+GGG | + | chr2_1:66903671-66903690 | Msa0219350:intron | 40.0% | |
| !!! | ATGGGTCAGTTTGGTTTTAG+TGG | - | chr2_1:66903751-66903770 | None:intergenic | 40.0% |
| ACTAAAACCAAACTGACCCA+TGG | + | chr2_1:66903750-66903769 | Msa0219350:intron | 40.0% | |
| CTCTAATAAAAAGGCGGTGA+AGG | - | chr2_1:66903805-66903824 | None:intergenic | 40.0% | |
| ! | AGCTCTTGGCACAAGTTTTA+AGG | + | chr2_1:66903901-66903920 | Msa0219350:intron | 40.0% |
| ! | GTTTATGGCGTTTTCCAACA+AGG | + | chr2_1:66904025-66904044 | Msa0219350:intron | 40.0% |
| ! | AGGAAAATGAGTGTGTTGCT+AGG | - | chr2_1:66904539-66904558 | None:intergenic | 40.0% |
| !! | GGCAGAACAATTTTAGTCAC+TGG | + | chr2_1:66904980-66904999 | Msa0219350:intron | 40.0% |
| ATGAGACTTATATTCAGGGC+CGG | - | chr2_1:66905510-66905529 | None:intergenic | 40.0% | |
| ! | CCTTCTTTAGAAATGTCTCC+AGG | - | chr2_1:66905731-66905750 | None:intergenic | 40.0% |
| ! | CCTGGAGACATTTCTAAAGA+AGG | + | chr2_1:66905728-66905747 | Msa0219350:CDS | 40.0% |
| ! | GAAGGAATCCATTCTAGAAG+AGG | + | chr2_1:66905760-66905779 | Msa0219350:CDS | 40.0% |
| ! | GCAAATCTCCTCTTCTAGAA+TGG | - | chr2_1:66905771-66905790 | None:intergenic | 40.0% |
| TATACCAACCTGTTGAAACG+TGG | - | chr2_1:66906023-66906042 | None:intergenic | 40.0% | |
| ! | TACTCTCTGAGGGTCAAAAT+AGG | + | chr2_1:66906065-66906084 | Msa0219350:intron | 40.0% |
| TGCAAAAGGGGCAATACTTA+GGG | - | chr2_1:66906297-66906316 | None:intergenic | 40.0% | |
| ! | TATTGCCCCTTTTGCAGTTT+TGG | + | chr2_1:66906301-66906320 | Msa0219350:intron | 40.0% |
| TAACCAAGTCAATGCACAAG+TGG | - | chr2_1:66906459-66906478 | None:intergenic | 40.0% | |
| CTTGGTTAAAATTGGTCAGG+GGG | + | chr2_1:66906471-66906490 | Msa0219350:intron | 40.0% | |
| GGTAGTATTGCAATGACTCA+AGG | + | chr2_1:66907094-66907113 | Msa0219350:intron | 40.0% | |
| TCACAAAATACTTGCAGGCA+TGG | - | chr2_1:66908133-66908152 | None:intergenic | 40.0% | |
| TGATATTGAAGTGGCCATGA+AGG | + | chr2_1:66908387-66908406 | Msa0219350:CDS | 40.0% | |
| ACTTATAGAGAACCTTTCCC+TGG | + | chr2_1:66908658-66908677 | Msa0219350:CDS | 40.0% | |
| GTAGTCGTTGCTTATGGTAA+AGG | + | chr2_1:66909100-66909119 | Msa0219350:CDS | 40.0% | |
| CGTAATTGGATTTCTGACAG+AGG | - | chr2_1:66909380-66909399 | None:intergenic | 40.0% | |
| ! | CTGAAAGTACGGTACGTAAT+TGG | - | chr2_1:66909394-66909413 | None:intergenic | 40.0% |
| ! | TTAGCAACATAGCTAGCTTC+CGG | + | chr2_1:66909497-66909516 | Msa0219350:CDS | 40.0% |
| GTAAAGTAGAGAAGAGGTGG+TGG | + | chr2_1:66903607-66903626 | Msa0219350:intron | 45.0% | |
| AAATGAGTTGCTGCAAGTGG+TGG | + | chr2_1:66903635-66903654 | Msa0219350:intron | 45.0% | |
| AATGAGTTGCTGCAAGTGGT+GGG | + | chr2_1:66903636-66903655 | Msa0219350:intron | 45.0% | |
| GTGGGTGAGAAGAGAAAGAA+TGG | + | chr2_1:66903654-66903673 | Msa0219350:intron | 45.0% | |
| AAAACCAAACTGACCCATGG+TGG | + | chr2_1:66903753-66903772 | Msa0219350:intron | 45.0% | |
| AAACCAAACTGACCCATGGT+GGG | + | chr2_1:66903754-66903773 | Msa0219350:intron | 45.0% | |
| GTAAAATCCCTTCCCACCAT+GGG | - | chr2_1:66903769-66903788 | None:intergenic | 45.0% | |
| TGGGCACAATGACAATGTTC+TGG | - | chr2_1:66904872-66904891 | None:intergenic | 45.0% | |
| !!! | ATTTTAGTCACTGGTGCCAC+TGG | + | chr2_1:66904989-66905008 | Msa0219350:intron | 45.0% |
| TATAAGCATGGTCCTAAGGG+TGG | + | chr2_1:66905235-66905254 | Msa0219350:intron | 45.0% | |
| ATAAGCATGGTCCTAAGGGT+GGG | + | chr2_1:66905236-66905255 | Msa0219350:intron | 45.0% | |
| GTCCAAGACACCATTCTTAG+TGG | + | chr2_1:66905273-66905292 | Msa0219350:intron | 45.0% | |
| TGCCACTAAGAATGGTGTCT+TGG | - | chr2_1:66905278-66905297 | None:intergenic | 45.0% | |
| !! | GAAAAGTTGACTTTGGTGCC+TGG | + | chr2_1:66905710-66905729 | Msa0219350:CDS | 45.0% |
| TTGTCCACGTTTCAACAGGT+TGG | + | chr2_1:66906016-66906035 | Msa0219350:intron | 45.0% | |
| AGGGTCAAAATAGGTTCGAC+AGG | + | chr2_1:66906074-66906093 | Msa0219350:intron | 45.0% | |
| GGGTCAAAATAGGTTCGACA+GGG | + | chr2_1:66906075-66906094 | Msa0219350:intron | 45.0% | |
| GCAAAAGGGGCAATACTTAG+GGG | - | chr2_1:66906296-66906315 | None:intergenic | 45.0% | |
| CTGCAAAAGGGGCAATACTT+AGG | - | chr2_1:66906298-66906317 | None:intergenic | 45.0% | |
| TGAGGCCAAAACTGCAAAAG+GGG | - | chr2_1:66906309-66906328 | None:intergenic | 45.0% | |
| CTGAGGCCAAAACTGCAAAA+GGG | - | chr2_1:66906310-66906329 | None:intergenic | 45.0% | |
| ! | ACTTGGTCAAAATTGGCCTG+AGG | - | chr2_1:66906327-66906346 | None:intergenic | 45.0% |
| ! | AGTCATCTTGACCTTTTGCG+AGG | + | chr2_1:66906813-66906832 | Msa0219350:intron | 45.0% |
| GCCGGATTTAGCATAAGGAT+TGG | - | chr2_1:66908111-66908130 | None:intergenic | 45.0% | |
| AAAATACTTGCAGGCATGGC+CGG | - | chr2_1:66908129-66908148 | None:intergenic | 45.0% | |
| TACCTTGCAGCTTATGTGTG+TGG | + | chr2_1:66908223-66908242 | Msa0219350:intron | 45.0% | |
| TTAGAGGATCCTCATCGCTA+CGG | + | chr2_1:66908265-66908284 | Msa0219350:CDS | 45.0% | |
| ! | GTGTCACTAAATGGAGTTCC+AGG | + | chr2_1:66908289-66908308 | Msa0219350:CDS | 45.0% |
| TTCCATACCCAAGTCCTTCA+TGG | - | chr2_1:66908404-66908423 | None:intergenic | 45.0% | |
| TGAAGGACTTGGGTATGGAA+AGG | + | chr2_1:66908404-66908423 | Msa0219350:CDS | 45.0% | |
| ATAGAGAACCTTTCCCTGGA+TGG | + | chr2_1:66908662-66908681 | Msa0219350:CDS | 45.0% | |
| TAGAGAACCTTTCCCTGGAT+GGG | + | chr2_1:66908663-66908682 | Msa0219350:CDS | 45.0% | |
| TTAAGCCTTCAACCCATCCA+GGG | - | chr2_1:66908678-66908697 | None:intergenic | 45.0% | |
| AGCAACGACTACACTGTCTA+TGG | - | chr2_1:66909092-66909111 | None:intergenic | 45.0% | |
| GACAGTGTAGTCGTTGCTTA+TGG | + | chr2_1:66909094-66909113 | Msa0219350:CDS | 45.0% | |
| !!! | TTTTTGTATTTTATTTTATT+AGG | + | chr2_1:66906528-66906547 | Msa0219350:intron | 5.0% |
| !!! | TTTTGTATTTTATTTTATTA+GGG | + | chr2_1:66906529-66906548 | Msa0219350:intron | 5.0% |
| ! | AAACTGACCCATGGTGGGAA+GGG | + | chr2_1:66903759-66903778 | Msa0219350:intron | 50.0% |
| GGTAAAATCCCTTCCCACCA+TGG | - | chr2_1:66903770-66903789 | None:intergenic | 50.0% | |
| AAGGCGGTGAAGGATCACAT+GGG | - | chr2_1:66903795-66903814 | None:intergenic | 50.0% | |
| AAAGGCGGTGAAGGATCACA+TGG | - | chr2_1:66903796-66903815 | None:intergenic | 50.0% | |
| CTTAAAGGCAGGTGCATGCA+GGG | - | chr2_1:66904296-66904315 | None:intergenic | 50.0% | |
| ACTTAAAGGCAGGTGCATGC+AGG | - | chr2_1:66904297-66904316 | None:intergenic | 50.0% | |
| ATAGGTCTCGCCAAACCATG+TGG | + | chr2_1:66904600-66904619 | Msa0219350:intron | 50.0% | |
| ! | ACTTTTTGCGAGGAAGCCAG+TGG | - | chr2_1:66905008-66905027 | None:intergenic | 50.0% |
| CACCTCATTGCGGAAACGTT+GGG | - | chr2_1:66905187-66905206 | None:intergenic | 50.0% | |
| TCACCTCATTGCGGAAACGT+TGG | - | chr2_1:66905188-66905207 | None:intergenic | 50.0% | |
| AGAATGGTGTCTTGGACTGC+CGG | - | chr2_1:66905270-66905289 | None:intergenic | 50.0% | |
| GTGCTTGTCCACGTTTCAAC+AGG | + | chr2_1:66906012-66906031 | Msa0219350:CDS | 50.0% | |
| AAAGGGGCAATACTTAGGGG+CGG | - | chr2_1:66906293-66906312 | None:intergenic | 50.0% | |
| CCTGAGGCCAAAACTGCAAA+AGG | - | chr2_1:66906311-66906330 | None:intergenic | 50.0% | |
| !! | CCTTTTGCAGTTTTGGCCTC+AGG | + | chr2_1:66906308-66906327 | Msa0219350:intron | 50.0% |
| ! | CCTCTACGTCAGCTTTGACT+TGG | - | chr2_1:66906344-66906363 | None:intergenic | 50.0% |
| CCAAGTCAAAGCTGACGTAG+AGG | + | chr2_1:66906341-66906360 | Msa0219350:intron | 50.0% | |
| !! | CGTCCACTTGTGCATTGACT+TGG | + | chr2_1:66906453-66906472 | Msa0219350:intron | 50.0% |
| AGGGGGCCAAAACTGCAAAA+GGG | + | chr2_1:66906488-66906507 | Msa0219350:intron | 50.0% | |
| TATGTCCATGCAAGTAGGGG+TGG | + | chr2_1:66907815-66907834 | Msa0219350:intron | 50.0% | |
| GCATGGCCGGATTTAGCATA+AGG | - | chr2_1:66908116-66908135 | None:intergenic | 50.0% | |
| GGGAGGAGGACTCATATTAG+AGG | + | chr2_1:66908249-66908268 | Msa0219350:CDS | 50.0% | |
| ! | CGCTACGGTGTGTCACTAAA+TGG | + | chr2_1:66908280-66908299 | Msa0219350:CDS | 50.0% |
| TGAAGTGGCCATGAAGGACT+TGG | + | chr2_1:66908393-66908412 | Msa0219350:CDS | 50.0% | |
| GAAGTGGCCATGAAGGACTT+GGG | + | chr2_1:66908394-66908413 | Msa0219350:CDS | 50.0% | |
| CTTAAGCCTTCAACCCATCC+AGG | - | chr2_1:66908679-66908698 | None:intergenic | 50.0% | |
| !! | CTGGATGGGTTGAAGGCTTA+AGG | + | chr2_1:66908677-66908696 | Msa0219350:CDS | 50.0% |
| CGTAATTCAAATCGCCGCCT+AGG | - | chr2_1:66908826-66908845 | None:intergenic | 50.0% | |
| TGAGCAGATACCAGCAGACA+TGG | + | chr2_1:66909279-66909298 | Msa0219350:intron | 50.0% | |
| GCATTTACCACCATGTCTGC+TGG | - | chr2_1:66909292-66909311 | None:intergenic | 50.0% | |
| CTTCCCACCATGGGTCAGTT+TGG | - | chr2_1:66903760-66903779 | None:intergenic | 55.0% | |
| ! | CAAACTGACCCATGGTGGGA+AGG | + | chr2_1:66903758-66903777 | Msa0219350:intron | 55.0% |
| CGGTGAAGGATCACATGGGA+AGG | - | chr2_1:66903791-66903810 | None:intergenic | 55.0% | |
| !! | TCACTCCAGCTCTAGAGACG+CGG | - | chr2_1:66904334-66904353 | None:intergenic | 55.0% |
| TGCCCAACGTTTCCGCAATG+AGG | + | chr2_1:66905182-66905201 | Msa0219350:intron | 55.0% | |
| CAGGGGGCCAAAACTGCAAA+AGG | + | chr2_1:66906487-66906506 | Msa0219350:intron | 55.0% | |
| GGGGGCCAAAACTGCAAAAG+GGG | + | chr2_1:66906489-66906508 | Msa0219350:intron | 55.0% | |
| TGGATCCACCCCTACTTGCA+TGG | - | chr2_1:66907823-66907842 | None:intergenic | 55.0% | |
| CGCCACACACATAAGCTGCA+AGG | - | chr2_1:66908228-66908247 | None:intergenic | 55.0% | |
| TGCAGCTTATGTGTGTGGCG+AGG | + | chr2_1:66908228-66908247 | Msa0219350:intron | 55.0% | |
| GCAGCTTATGTGTGTGGCGA+GGG | + | chr2_1:66908229-66908248 | Msa0219350:intron | 55.0% | |
| AGTGACACACCGTAGCGATG+AGG | - | chr2_1:66908277-66908296 | None:intergenic | 55.0% | |
| GGCCATGAAGGACTTGGGTA+TGG | + | chr2_1:66908399-66908418 | Msa0219350:CDS | 55.0% | |
| CCTTCAACCCATCCAGGGAA+AGG | - | chr2_1:66908673-66908692 | None:intergenic | 55.0% | |
| !! | CCTTTCCCTGGATGGGTTGA+AGG | + | chr2_1:66908670-66908689 | Msa0219350:CDS | 55.0% |
| ! | TCTCGACGCAGTTTTCGACG+TGG | + | chr2_1:66909147-66909166 | Msa0219350:CDS | 55.0% |
| GCAGATACCAGCAGACATGG+TGG | + | chr2_1:66909282-66909301 | Msa0219350:intron | 55.0% | |
| !! | ACTCCAGCTCTAGAGACGCG+GGG | - | chr2_1:66904332-66904351 | None:intergenic | 60.0% |
| !! | CACTCCAGCTCTAGAGACGC+GGG | - | chr2_1:66904333-66904352 | None:intergenic | 60.0% |
| AGCATGGTCCTAAGGGTGGG+TGG | + | chr2_1:66905239-66905258 | Msa0219350:intron | 60.0% | |
| GGTCCTAAGGGTGGGTGGAA+AGG | + | chr2_1:66905244-66905263 | Msa0219350:intron | 60.0% | |
| CTAAGGGTGGGTGGAAAGGC+CGG | + | chr2_1:66905248-66905267 | Msa0219350:intron | 60.0% | |
| GCTTATGTGTGTGGCGAGGG+AGG | + | chr2_1:66908232-66908251 | Msa0219350:intron | 60.0% | |
| TATGTGTGTGGCGAGGGAGG+AGG | + | chr2_1:66908235-66908254 | Msa0219350:CDS | 60.0% | |
| !! | GATCCCCGCGTCTCTAGAGC+TGG | + | chr2_1:66904326-66904345 | Msa0219350:intron | 65.0% |
| CGGCCTTTCCACCCACCCTT+AGG | - | chr2_1:66905250-66905269 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66903515 | 66909660 | 66903515 | ID=Msa0219350;Name=Msa0219350 |
| chr2_1 | mRNA | 66903515 | 66909660 | 66903515 | ID=Msa0219350-mRNA-1;Parent=Msa0219350;Name=Msa0219350-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.83|0.57|0.85|1|1|7|0|373 |
| chr2_1 | exon | 66903515 | 66903520 | 66903515 | ID=Msa0219350-mRNA-1:exon:18903;Parent=Msa0219350-mRNA-1 |
| chr2_1 | exon | 66905641 | 66905843 | 66905641 | ID=Msa0219350-mRNA-1:exon:18904;Parent=Msa0219350-mRNA-1 |
| chr2_1 | exon | 66905933 | 66906033 | 66905933 | ID=Msa0219350-mRNA-1:exon:18905;Parent=Msa0219350-mRNA-1 |
| chr2_1 | exon | 66908233 | 66908425 | 66908233 | ID=Msa0219350-mRNA-1:exon:18906;Parent=Msa0219350-mRNA-1 |
| chr2_1 | exon | 66908537 | 66908698 | 66908537 | ID=Msa0219350-mRNA-1:exon:18907;Parent=Msa0219350-mRNA-1 |
| chr2_1 | exon | 66909087 | 66909168 | 66909087 | ID=Msa0219350-mRNA-1:exon:18908;Parent=Msa0219350-mRNA-1 |
| chr2_1 | exon | 66909286 | 66909660 | 66909286 | ID=Msa0219350-mRNA-1:exon:18909;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66903515 | 66903520 | 66903515 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66905641 | 66905843 | 66905641 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66905933 | 66906033 | 66905933 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66908233 | 66908425 | 66908233 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66908537 | 66908698 | 66908537 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66909087 | 66909168 | 66909087 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| chr2_1 | CDS | 66909286 | 66909660 | 66909286 | ID=Msa0219350-mRNA-1:cds;Parent=Msa0219350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
