Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223860 | XP_013465459.1 | 84.272 | 515 | 64 | 4 | 1 | 498 | 1 | 515 | 0.0 | 857 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223860 | A0A072VBU4 | 84.272 | 515 | 64 | 4 | 1 | 498 | 1 | 515 | 0.0 | 857 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223860 | Msa0265040 | 0.921198 | 4.866744e-88 | -8.615850e-47 |
| Msa0223860 | Msa0685060 | 0.814663 | 1.373962e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223860 | MtrunA17_Chr2g0329621 | 84.272 | 515 | 64 | 4 | 1 | 498 | 1 | 515 | 0.0 | 857 |
| Msa0223860 | MtrunA17_Chr5g0401081 | 30.568 | 458 | 260 | 11 | 48 | 465 | 43 | 482 | 1.73e-64 | 217 |
| Msa0223860 | MtrunA17_Chr3g0137351 | 21.961 | 510 | 306 | 16 | 16 | 469 | 44 | 517 | 1.88e-30 | 124 |
| Msa0223860 | MtrunA17_Chr1g0208531 | 23.392 | 513 | 328 | 15 | 20 | 491 | 53 | 541 | 3.67e-30 | 124 |
| Msa0223860 | MtrunA17_Chr2g0304631 | 21.649 | 485 | 314 | 15 | 30 | 469 | 54 | 517 | 1.55e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223860 | AT5G67550.1 | 25.697 | 502 | 329 | 10 | 14 | 480 | 6 | 498 | 9.05e-50 | 178 |
| Msa0223860 | AT2G25270.1 | 23.667 | 469 | 297 | 15 | 44 | 469 | 75 | 525 | 1.59e-31 | 128 |
| Msa0223860 | AT2G12400.1 | 24.268 | 478 | 297 | 13 | 37 | 469 | 63 | 520 | 2.60e-29 | 121 |
| Msa0223860 | AT1G71110.1 | 21.937 | 506 | 329 | 15 | 25 | 486 | 51 | 534 | 1.19e-25 | 110 |
| Msa0223860 | AT1G80540.1 | 19.097 | 487 | 331 | 13 | 28 | 463 | 43 | 517 | 3.38e-16 | 81.6 |
| Msa0223860 | AT1G80540.3 | 18.856 | 472 | 330 | 12 | 33 | 463 | 12 | 471 | 3.74e-16 | 81.3 |
Find 99 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCACCAACAAGAATTAT+TGG | 0.207437 | 2_1:-73551748 | Msa0223860:CDS |
| ATATATATATTATATATTAA+AGG | 0.243759 | 2_1:-73549104 | Msa0223860:three_prime_UTR |
| ATGTTAGTGTAATATATATT+AGG | 0.248865 | 2_1:+73549031 | None:intergenic |
| TTGATATTCACTGGAGTATA+TGG | 0.251671 | 2_1:-73551639 | Msa0223860:CDS |
| TTGATTACATCTAGTTAAAT+TGG | 0.256611 | 2_1:-73554123 | Msa0223860:intron |
| TCGGGTTGGTAGGTATAATT+TGG | 0.268119 | 2_1:+73549897 | None:intergenic |
| TATATATATTATATATTAAA+GGG | 0.290684 | 2_1:-73549103 | Msa0223860:three_prime_UTR |
| GAGCTTAAGCTGTTGTTATA+AGG | 0.299992 | 2_1:+73550215 | None:intergenic |
| AAAAGTTATACACGGATTAC+TGG | 0.300423 | 2_1:+73549211 | None:intergenic |
| ACAGGCTTGTTGTACTTTGC+TGG | 0.301195 | 2_1:-73550434 | Msa0223860:intron |
| GTATTATGCTGGCTATTCTT+TGG | 0.304357 | 2_1:-73550402 | Msa0223860:CDS |
| GGCTATTAACATGAGAAATA+TGG | 0.305507 | 2_1:+73551461 | None:intergenic |
| TTTAACTGCTCTTGATTTGA+AGG | 0.331948 | 2_1:+73549347 | None:intergenic |
| TTTGTATCCAAACAAGTAAA+AGG | 0.335128 | 2_1:+73549699 | None:intergenic |
| AACACAACAGAAGCATTAAA+AGG | 0.338281 | 2_1:-73551201 | Msa0223860:CDS |
| TGATGCTTTACTAATTCCTT+TGG | 0.344919 | 2_1:-73551484 | Msa0223860:CDS |
| ATTGAATGTGTATCCAAGTA+TGG | 0.345176 | 2_1:-73549592 | Msa0223860:CDS |
| AATTATACTCACTTCCTCTA+AGG | 0.347425 | 2_1:+73549057 | None:intergenic |
| GTTATTTCAATAGACCTTAG+AGG | 0.363692 | 2_1:-73549071 | Msa0223860:three_prime_UTR |
| ATCTTAGCATATTTCTTCAT+AGG | 0.370043 | 2_1:+73549504 | None:intergenic |
| TACACTCCAATAATTCTTGT+TGG | 0.372190 | 2_1:+73551742 | None:intergenic |
| CCTATTCGTATAGTATTATC+TGG | 0.379970 | 2_1:+73549867 | None:intergenic |
| GCAACAGGGCTAGTTCTTGT+AGG | 0.391851 | 2_1:-73551306 | Msa0223860:CDS |
| TATTTAGTTCATAAGAATAT+AGG | 0.395510 | 2_1:-73549271 | Msa0223860:three_prime_UTR |
| AGTATTATCTGGACAATTCT+CGG | 0.408061 | 2_1:+73549878 | None:intergenic |
| CATACAAAATTCCACATAGA+AGG | 0.413531 | 2_1:+73551595 | None:intergenic |
| AGTCATGAACATTGTTATCA+TGG | 0.416314 | 2_1:-73549411 | Msa0223860:CDS |
| GGAGTATATGGATATGCAAT+TGG | 0.424393 | 2_1:-73551627 | Msa0223860:CDS |
| TTGTAGTCTTTGATATTCAC+TGG | 0.425080 | 2_1:-73551648 | Msa0223860:intron |
| TCTAACAAATGTTCCATACT+TGG | 0.426331 | 2_1:+73549579 | None:intergenic |
| CCAGATAATACTATACGAAT+AGG | 0.430631 | 2_1:-73549867 | Msa0223860:CDS |
| TGTTAGTGTAATATATATTA+GGG | 0.433042 | 2_1:+73549032 | None:intergenic |
| AAATTGTGACATGGTTCAGC+TGG | 0.434571 | 2_1:-73554414 | None:intergenic |
| ATTCAGTATACCTTATTTAG+TGG | 0.439839 | 2_1:-73549177 | Msa0223860:three_prime_UTR |
| AAGAATATAGGAACCGGTAT+TGG | 0.441138 | 2_1:-73549259 | Msa0223860:three_prime_UTR |
| ACTTGTTTGGATACAAATGA+TGG | 0.450904 | 2_1:-73549693 | Msa0223860:CDS |
| CATTGTTATCATGGTTCAGA+TGG | 0.453877 | 2_1:-73549402 | Msa0223860:CDS |
| TGGGTAGGAATGGTGTTCCT+TGG | 0.455580 | 2_1:-73549477 | Msa0223860:CDS |
| TATAATAGATACCAAGCCTT+TGG | 0.456475 | 2_1:+73554080 | None:intergenic |
| GATTTGTGTAGAGTTGCAAC+AGG | 0.456871 | 2_1:-73551321 | Msa0223860:intron |
| TTTCTGGTGTACTACGGTTA+AGG | 0.464706 | 2_1:-73550574 | Msa0223860:CDS |
| GGTGTTCCTTGGAGTGATCA+TGG | 0.465850 | 2_1:-73549466 | Msa0223860:CDS |
| GTTCATAAGAATATAGGAAC+CGG | 0.468801 | 2_1:-73549265 | Msa0223860:three_prime_UTR |
| GCACTAAATTCAGATAGAAC+TGG | 0.472426 | 2_1:+73550158 | None:intergenic |
| TATGAAGAAATATGCTAAGA+TGG | 0.477004 | 2_1:-73549502 | Msa0223860:CDS |
| TCACCTGGTGATTCTGCTGC+AGG | 0.478707 | 2_1:-73554012 | Msa0223860:intron |
| TAATTTGGTGGCGCTGAGAA+AGG | 0.479612 | 2_1:+73549912 | None:intergenic |
| TTCAGTATACCTTATTTAGT+GGG | 0.484635 | 2_1:-73549176 | Msa0223860:three_prime_UTR |
| GTATTATCTGGACAATTCTC+GGG | 0.490684 | 2_1:+73549879 | None:intergenic |
| AGGCATGGAGAGTAACTTGA+TGG | 0.496619 | 2_1:-73551181 | Msa0223860:CDS |
| GTTCTATCTGAATTTAGTGC+TGG | 0.497245 | 2_1:-73550155 | Msa0223860:CDS |
| TTACATCTAGTTAAATTGGC+AGG | 0.497933 | 2_1:-73554119 | Msa0223860:intron |
| CAACAGGGCTAGTTCTTGTA+GGG | 0.506049 | 2_1:-73551305 | Msa0223860:CDS |
| GGTTGTTGACAGTATTATGC+TGG | 0.511614 | 2_1:-73550413 | Msa0223860:CDS |
| TGAGCAATTCTTGACATGGA+AGG | 0.514152 | 2_1:+73550189 | None:intergenic |
| TATCTATAATCTTGTTAATG+AGG | 0.517870 | 2_1:-73550132 | Msa0223860:intron |
| TACTTGGATACACATTCAAT+AGG | 0.517880 | 2_1:+73549595 | None:intergenic |
| AGAAATATGCTAAGATGGCA+TGG | 0.519247 | 2_1:-73549497 | Msa0223860:CDS |
| GGTTGGTAGGTATAATTTGG+TGG | 0.528341 | 2_1:+73549900 | None:intergenic |
| GTCAGAACAGATTACACAAA+GGG | 0.530197 | 2_1:-73551828 | Msa0223860:CDS |
| CATAATCAAAACAGCAAACA+AGG | 0.542949 | 2_1:-73551241 | Msa0223860:CDS |
| AGAAGCCTCAACATTAACAT+TGG | 0.547079 | 2_1:+73551155 | None:intergenic |
| GAAGCACAAGCTGTCTCACC+TGG | 0.551867 | 2_1:-73554027 | Msa0223860:CDS |
| CTTGTTTGGATACAAATGAT+GGG | 0.553416 | 2_1:-73549692 | Msa0223860:CDS |
| ATTTCTTCATAGGCTTGCAA+TGG | 0.560254 | 2_1:+73549514 | None:intergenic |
| AACAGAAGCATTAAAAGGCA+TGG | 0.560327 | 2_1:-73551196 | Msa0223860:CDS |
| TTAAAGATGTTCATAGCCAA+AGG | 0.561779 | 2_1:-73554096 | Msa0223860:exon |
| GAACAGTTTCTGGTGTACTA+CGG | 0.561972 | 2_1:-73550580 | Msa0223860:intron |
| GATGTTCATAGCCAAAGGCT+TGG | 0.569407 | 2_1:-73554091 | Msa0223860:CDS |
| TATATACAAATGTTGCATGT+CGG | 0.581404 | 2_1:+73549126 | None:intergenic |
| TATCTGGACAATTCTCGGGT+TGG | 0.582340 | 2_1:+73549883 | None:intergenic |
| CTGGTGTACTACGGTTAAGG+AGG | 0.583051 | 2_1:-73550571 | Msa0223860:CDS |
| TGGACAATTCTCGGGTTGGT+AGG | 0.583599 | 2_1:+73549887 | None:intergenic |
| TCACAACTCTTGTAATTACA+AGG | 0.584647 | 2_1:+73551504 | None:intergenic |
| ATATAGGAACCGGTATTGGA+AGG | 0.587145 | 2_1:-73549255 | Msa0223860:three_prime_UTR |
| TCATGGTTCAGATGGTTCTG+TGG | 0.587485 | 2_1:-73549394 | Msa0223860:CDS |
| ATATATATTATATATTAAAG+GGG | 0.591641 | 2_1:-73549102 | Msa0223860:three_prime_UTR |
| AAGGGATAATACAATTAGAG+TGG | 0.592143 | 2_1:-73551810 | Msa0223860:CDS |
| AATTGTGACATGGTTCAGCT+GGG | 0.592488 | 2_1:-73554413 | None:intergenic |
| GAAATATGCTAAGATGGCAT+GGG | 0.595556 | 2_1:-73549496 | Msa0223860:CDS |
| AACATGAGAAATATGGCCAA+AGG | 0.602955 | 2_1:+73551468 | None:intergenic |
| GCTTTGAGCAATTCTTGACA+TGG | 0.606847 | 2_1:+73550185 | None:intergenic |
| TGATAAATTCAAGAGATGAA+AGG | 0.622724 | 2_1:+73554371 | None:intergenic |
| TGGTGTACTACGGTTAAGGA+GGG | 0.631651 | 2_1:-73550570 | Msa0223860:CDS |
| TATGCTAAGATGGCATGGGT+AGG | 0.632516 | 2_1:-73549492 | Msa0223860:CDS |
| TATATATTATATATTAAAGG+GGG | 0.635375 | 2_1:-73549101 | Msa0223860:three_prime_UTR |
| AAGGATTGCAAACAAGAACA+AGG | 0.637380 | 2_1:+73549931 | None:intergenic |
| AATGATGGGAGTTGTGACAA+TGG | 0.638209 | 2_1:-73549678 | Msa0223860:CDS |
| ACAAAACCATGATCACTCCA+AGG | 0.642179 | 2_1:+73549460 | None:intergenic |
| TAGGCTTGCAATGGTCAACA+AGG | 0.643609 | 2_1:+73549523 | None:intergenic |
| TAAGATGGCATGGGTAGGAA+TGG | 0.645876 | 2_1:-73549487 | Msa0223860:CDS |
| GGAATGTTATGCCTTCTATG+TGG | 0.645924 | 2_1:-73551606 | Msa0223860:CDS |
| GAATTCTGTACTTCACAATG+AGG | 0.650478 | 2_1:+73549369 | None:intergenic |
| GGAAGCCAATGTTAATGTTG+AGG | 0.652341 | 2_1:-73551160 | Msa0223860:CDS |
| ACGAATAGGTGACATTCCAA+AGG | 0.664454 | 2_1:-73549853 | Msa0223860:intron |
| TTACCTGCAGCAGAATCACC+AGG | 0.670804 | 2_1:+73554009 | None:intergenic |
| ATTTGTGTAGAGTTGCAACA+GGG | 0.687136 | 2_1:-73551320 | Msa0223860:intron |
| TGTCAGAACAGATTACACAA+AGG | 0.693803 | 2_1:-73551829 | Msa0223860:CDS |
| TGAGAGTTAAAATTGTGACA+TGG | 0.716889 | 2_1:-73554423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | - | chr2_1:73550746-73550765 | Msa0223860:intron | 0.0% |
| !! | ATATATATATTATATATTAA+AGG | - | chr2_1:73554349-73554368 | Msa0223860:intron | 0.0% |
| !! | TATATATATTATATATTAAA+GGG | - | chr2_1:73554350-73554369 | Msa0223860:intron | 0.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr2_1:73550345-73550364 | None:intergenic | 10.0% |
| !!! | TTGATATTTTTATATTTGTT+TGG | + | chr2_1:73551469-73551488 | None:intergenic | 10.0% |
| !! | AAAATATTACTATGTAATTA+TGG | + | chr2_1:73553123-73553142 | None:intergenic | 10.0% |
| !! | TATATATTATATATTAAAGG+GGG | - | chr2_1:73554352-73554371 | Msa0223860:intron | 10.0% |
| !! | TACATATACATAATTTGATT+TGG | - | chr2_1:73549250-73549269 | Msa0223860:three_prime_UTR | 15.0% |
| !!! | CATTTTTATGATATTTGATA+GGG | + | chr2_1:73549809-73549828 | None:intergenic | 15.0% |
| !!! | GCTTTAAATATTTATTTCAA+AGG | - | chr2_1:73549881-73549900 | Msa0223860:CDS | 15.0% |
| !!! | TTTTTTAAATTTTTCCGTAT+CGG | + | chr2_1:73550269-73550288 | None:intergenic | 15.0% |
| !!! | AGCAATACTATTTTTTTTAT+TGG | + | chr2_1:73550905-73550924 | None:intergenic | 15.0% |
| !!! | AAAAAATAGTATTGCTTTTT+AGG | - | chr2_1:73550909-73550928 | Msa0223860:intron | 15.0% |
| !!! | TACTTTTTGAAATTATCTAA+TGG | + | chr2_1:73551671-73551690 | None:intergenic | 15.0% |
| !! | AAAATGAATGAAAAATTACA+TGG | - | chr2_1:73552685-73552704 | Msa0223860:intron | 15.0% |
| !!! | GTAATATTTTTATAAAGTAG+AGG | - | chr2_1:73553133-73553152 | Msa0223860:intron | 15.0% |
| !!! | TATTTAGTTCATAAGAATAT+AGG | - | chr2_1:73554182-73554201 | Msa0223860:intron | 15.0% |
| !! | CATTTAAAAAAAGTTATACA+CGG | + | chr2_1:73554253-73554272 | None:intergenic | 15.0% |
| !! | TTTATCAGAACAATATTTGA+TGG | + | chr2_1:73549176-73549195 | None:intergenic | 20.0% |
| !! | TTGATTACATCTAGTTAAAT+TGG | - | chr2_1:73549330-73549349 | Msa0223860:exon | 20.0% |
| !! | ATTCATGTTGAAATATTACA+TGG | - | chr2_1:73549569-73549588 | Msa0223860:CDS | 20.0% |
| !!! | CCATTTTTATGATATTTGAT+AGG | + | chr2_1:73549810-73549829 | None:intergenic | 20.0% |
| !! | CCTATCAAATATCATAAAAA+TGG | - | chr2_1:73549807-73549826 | Msa0223860:intron | 20.0% |
| !! | AAATCATAAAAATGGTCAAA+TGG | - | chr2_1:73549854-73549873 | Msa0223860:CDS | 20.0% |
| !! | AATCATAAAAATGGTCAAAT+GGG | - | chr2_1:73549855-73549874 | Msa0223860:CDS | 20.0% |
| !! | ACATGATATATTTATTAACC+AGG | - | chr2_1:73549937-73549956 | Msa0223860:CDS | 20.0% |
| !!! | ATGTTAGAAATTGTTTTGTT+AGG | - | chr2_1:73550139-73550158 | Msa0223860:CDS | 20.0% |
| !!! | TGTTAGAAATTGTTTTGTTA+GGG | - | chr2_1:73550140-73550159 | Msa0223860:CDS | 20.0% |
| !! | TAAAAAATCAAGATACGATA+CGG | - | chr2_1:73550282-73550301 | Msa0223860:intron | 20.0% |
| !! | AATGGGTATAAAAAAAATTG+AGG | + | chr2_1:73550869-73550888 | None:intergenic | 20.0% |
| !! | AGATAATATAAAACGAGTTT+AGG | + | chr2_1:73551253-73551272 | None:intergenic | 20.0% |
| !!! | AATACTTTTGATTTTATCAC+TGG | - | chr2_1:73551290-73551309 | Msa0223860:CDS | 20.0% |
| !!! | TCATTTTTTGAAATTGTCTT+TGG | - | chr2_1:73551556-73551575 | Msa0223860:CDS | 20.0% |
| !! | TTTCGTCATTAAAATTGTAA+TGG | - | chr2_1:73552444-73552463 | Msa0223860:intron | 20.0% |
| !! | TTTACTATTTAAACAGTAGT+AGG | + | chr2_1:73552668-73552687 | None:intergenic | 20.0% |
| !! | TGTAATTATGGTAATAAGAA+AGG | + | chr2_1:73553111-73553130 | None:intergenic | 20.0% |
| !! | TATCTATAATCTTGTTAATG+AGG | - | chr2_1:73553321-73553340 | Msa0223860:intron | 20.0% |
| !! | ACATTAATATAGAACTCATT+TGG | + | chr2_1:73553385-73553404 | None:intergenic | 20.0% |
| !!! | TGTTCATAAACTATTGTTTT+TGG | - | chr2_1:73553402-73553421 | Msa0223860:intron | 20.0% |
| !! | TATATAGGACTAAAGTTAAA+TGG | - | chr2_1:73553654-73553673 | Msa0223860:intron | 20.0% |
| !!! | AATGTGATCATTCTTTTTTA+AGG | - | chr2_1:73553723-73553742 | Msa0223860:intron | 20.0% |
| !!! | AAATTTTATCCCACTAAATA+AGG | + | chr2_1:73554289-73554308 | None:intergenic | 20.0% |
| ! | TGATAAATTCAAGAGATGAA+AGG | + | chr2_1:73549085-73549104 | None:intergenic | 25.0% |
| ! | TTGAATATAATCACATGTGT+CGG | - | chr2_1:73549679-73549698 | Msa0223860:CDS | 25.0% |
| ! | AAGTCTTCAATTAGAAATGT+CGG | - | chr2_1:73549728-73549747 | Msa0223860:intron | 25.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | - | chr2_1:73550539-73550558 | Msa0223860:intron | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | + | chr2_1:73550545-73550564 | None:intergenic | 25.0% |
| ! | ACATTTCCTTTATCTTTCTT+TGG | + | chr2_1:73550604-73550623 | None:intergenic | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | - | chr2_1:73550757-73550776 | Msa0223860:intron | 25.0% |
| ! | TTGGAGATACTATTACTAAT+GGG | + | chr2_1:73550886-73550905 | None:intergenic | 25.0% |
| ! | ATTGGAGATACTATTACTAA+TGG | + | chr2_1:73550887-73550906 | None:intergenic | 25.0% |
| ! | ATGGACAAGTTATCATAATT+GGG | + | chr2_1:73551019-73551038 | None:intergenic | 25.0% |
| ! | AATGGACAAGTTATCATAAT+TGG | + | chr2_1:73551020-73551039 | None:intergenic | 25.0% |
| !! | ATTATGATAACTTGTCCATT+AGG | - | chr2_1:73551020-73551039 | Msa0223860:intron | 25.0% |
| ! | AAAAACTATGAACTTCCTAA+TGG | + | chr2_1:73551038-73551057 | None:intergenic | 25.0% |
| !! | ATTATCTAGAGTAGATAATG+TGG | + | chr2_1:73551084-73551103 | None:intergenic | 25.0% |
| ! | AGATTATTAAGAGGTCAATT+TGG | + | chr2_1:73551112-73551131 | None:intergenic | 25.0% |
| ! | AGACATGTAAGATTATTAAG+AGG | + | chr2_1:73551121-73551140 | None:intergenic | 25.0% |
| ! | AACTCTTCGTATTGTATATT+TGG | + | chr2_1:73551151-73551170 | None:intergenic | 25.0% |
| !! | GATAATTTCAAAAAGTACAG+AGG | - | chr2_1:73551674-73551693 | Msa0223860:intron | 25.0% |
| ! | AAGGTTTATCATCACAAAAA+TGG | - | chr2_1:73551901-73551920 | Msa0223860:intron | 25.0% |
| ! | CTCTAATGATTAATCACTAA+AGG | + | chr2_1:73552045-73552064 | None:intergenic | 25.0% |
| !!! | CGACACATACAATTTTTTTA+TGG | - | chr2_1:73552077-73552096 | Msa0223860:intron | 25.0% |
| !!! | TTTTCAAGCCATTATTGATA+AGG | + | chr2_1:73552401-73552420 | None:intergenic | 25.0% |
| ! | GTCATTAAAATTGTAATGGT+CGG | - | chr2_1:73552448-73552467 | Msa0223860:intron | 25.0% |
| ! | AATTTCAACGAGTAAATTGA+CGG | - | chr2_1:73552594-73552613 | Msa0223860:intron | 25.0% |
| ! | TTTAGTCCTTGAAATTGAAA+AGG | + | chr2_1:73552621-73552640 | None:intergenic | 25.0% |
| ! | GAAAAATTACATGGAAGTAA+TGG | - | chr2_1:73552694-73552713 | Msa0223860:intron | 25.0% |
| ! | AATGGAATAAATTTCATTGC+AGG | - | chr2_1:73552712-73552731 | Msa0223860:intron | 25.0% |
| !!! | TTAACATCGTGTTTTGATTT+TGG | - | chr2_1:73552796-73552815 | Msa0223860:intron | 25.0% |
| ! | TGTATCAATCATTATGTGTA+TGG | + | chr2_1:73552823-73552842 | None:intergenic | 25.0% |
| ! | ACATGATTCTCATATAATGT+TGG | - | chr2_1:73552840-73552859 | Msa0223860:intron | 25.0% |
| !! | AATTTTCATTGAACAGTTTC+TGG | - | chr2_1:73552863-73552882 | Msa0223860:intron | 25.0% |
| !!! | TGAAATTTTAGCATACTTAC+AGG | + | chr2_1:73552916-73552935 | None:intergenic | 25.0% |
| ! | TACTCCAACATGAAATTAAT+AGG | + | chr2_1:73553443-73553462 | None:intergenic | 25.0% |
| !!! | GAGTAACTTTTTTGGATTTT+TGG | - | chr2_1:73553458-73553477 | Msa0223860:intron | 25.0% |
| !!! | TCATCTTGGTCTTATAATTT+AGG | + | chr2_1:73553697-73553716 | None:intergenic | 25.0% |
| ! | ATCACATTGTTAATTCATCT+TGG | + | chr2_1:73553711-73553730 | None:intergenic | 25.0% |
| !! | ATTAAAGCCTTTTACTTGTT+TGG | - | chr2_1:73553747-73553766 | Msa0223860:intron | 25.0% |
| ! | TTTGTATCCAAACAAGTAAA+AGG | + | chr2_1:73553757-73553776 | None:intergenic | 25.0% |
| !! | AGAATGCATCTTTTACAATT+TGG | + | chr2_1:73553903-73553922 | None:intergenic | 25.0% |
| ! | ATCTTAGCATATTTCTTCAT+AGG | + | chr2_1:73553952-73553971 | None:intergenic | 25.0% |
| ! | TATGAAGAAATATGCTAAGA+TGG | - | chr2_1:73553951-73553970 | Msa0223860:intron | 25.0% |
| !!! | TGGTTTTGTTGATTATGTTT+TGG | - | chr2_1:73554007-73554026 | Msa0223860:intron | 25.0% |
| !!! | GATTATGTTTTGGACTATAA+AGG | - | chr2_1:73554017-73554036 | Msa0223860:CDS | 25.0% |
| !! | ATTCAGTATACCTTATTTAG+TGG | - | chr2_1:73554276-73554295 | Msa0223860:intron | 25.0% |
| !! | TTCAGTATACCTTATTTAGT+GGG | - | chr2_1:73554277-73554296 | Msa0223860:intron | 25.0% |
| ! | TATATACAAATGTTGCATGT+CGG | + | chr2_1:73554330-73554349 | None:intergenic | 25.0% |
| GATTATGATGATATAGACCA+TGG | - | chr2_1:73549266-73549285 | Msa0223860:three_prime_UTR | 30.0% | |
| GTATATGCATATAGATACCA+TGG | + | chr2_1:73549286-73549305 | None:intergenic | 30.0% | |
| TTACATCTAGTTAAATTGGC+AGG | - | chr2_1:73549334-73549353 | Msa0223860:CDS | 30.0% | |
| TTAAAGATGTTCATAGCCAA+AGG | - | chr2_1:73549357-73549376 | Msa0223860:CDS | 30.0% | |
| TATAATAGATACCAAGCCTT+TGG | + | chr2_1:73549376-73549395 | None:intergenic | 30.0% | |
| GTAGATTGCAGAAAATTTGA+AGG | + | chr2_1:73549520-73549539 | None:intergenic | 30.0% | |
| !! | TAATTTGTTATGCTTTAGCC+AGG | + | chr2_1:73549983-73550002 | None:intergenic | 30.0% |
| !!! | GAGAGACAATCTTTTTTTCA+TGG | + | chr2_1:73550065-73550084 | None:intergenic | 30.0% |
| GTATGTTAGTAGCTAAACTT+GGG | + | chr2_1:73550119-73550138 | None:intergenic | 30.0% | |
| TGTATGTTAGTAGCTAAACT+TGG | + | chr2_1:73550120-73550139 | None:intergenic | 30.0% | |
| AATATTGACGATTAAGAGAG+TGG | - | chr2_1:73550416-73550435 | Msa0223860:CDS | 30.0% | |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | + | chr2_1:73550521-73550540 | None:intergenic | 30.0% |
| GAAACCCTAATTTCTTAGAA+AGG | - | chr2_1:73550538-73550557 | Msa0223860:intron | 30.0% | |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | + | chr2_1:73550546-73550565 | None:intergenic | 30.0% |
| TGGACAAGTTATCATAATTG+GGG | + | chr2_1:73551018-73551037 | None:intergenic | 30.0% | |
| ! | TTCGTATTGTATATTTGGTG+AGG | + | chr2_1:73551146-73551165 | None:intergenic | 30.0% |
| AAGGGATAATACAATTAGAG+TGG | - | chr2_1:73551643-73551662 | Msa0223860:CDS | 30.0% | |
| ! | AATTTCAAAAAGTACAGAGG+AGG | - | chr2_1:73551677-73551696 | Msa0223860:intron | 30.0% |
| ACATCACCAACAAGAATTAT+TGG | - | chr2_1:73551705-73551724 | Msa0223860:intron | 30.0% | |
| TACACTCCAATAATTCTTGT+TGG | + | chr2_1:73551714-73551733 | None:intergenic | 30.0% | |
| GAAGTTAGACTCAAAAAAGA+GGG | + | chr2_1:73551748-73551767 | None:intergenic | 30.0% | |
| TGAAGTTAGACTCAAAAAAG+AGG | + | chr2_1:73551749-73551768 | None:intergenic | 30.0% | |
| TTGTAGTCTTTGATATTCAC+TGG | - | chr2_1:73551805-73551824 | Msa0223860:CDS | 30.0% | |
| TTGATATTCACTGGAGTATA+TGG | - | chr2_1:73551814-73551833 | Msa0223860:CDS | 30.0% | |
| CATACAAAATTCCACATAGA+AGG | + | chr2_1:73551861-73551880 | None:intergenic | 30.0% | |
| ! | CTTCTATGTGGAATTTTGTA+TGG | - | chr2_1:73551859-73551878 | Msa0223860:intron | 30.0% |
| !! | AGTTATTTTGCTGATCACAA+AGG | - | chr2_1:73551882-73551901 | Msa0223860:intron | 30.0% |
| GTTTATCATCACAAAAATGG+AGG | - | chr2_1:73551904-73551923 | Msa0223860:intron | 30.0% | |
| TCACAACTCTTGTAATTACA+AGG | + | chr2_1:73551952-73551971 | None:intergenic | 30.0% | |
| TGATGCTTTACTAATTCCTT+TGG | - | chr2_1:73551969-73551988 | Msa0223860:intron | 30.0% | |
| GGCTATTAACATGAGAAATA+TGG | + | chr2_1:73551995-73552014 | None:intergenic | 30.0% | |
| CATAATCAAAACAGCAAACA+AGG | - | chr2_1:73552212-73552231 | Msa0223860:intron | 30.0% | |
| !! | AACACAACAGAAGCATTAAA+AGG | - | chr2_1:73552252-73552271 | Msa0223860:intron | 30.0% |
| AAATGCAAGCTCAGAAAAAT+AGG | - | chr2_1:73552373-73552392 | Msa0223860:intron | 30.0% | |
| GTTTCTCAAACTTGTGAAAT+TGG | - | chr2_1:73552479-73552498 | Msa0223860:intron | 30.0% | |
| ! | AATTTTGCACCACGATTTAA+GGG | + | chr2_1:73552513-73552532 | None:intergenic | 30.0% |
| ! | AAATTTTGCACCACGATTTA+AGG | + | chr2_1:73552514-73552533 | None:intergenic | 30.0% |
| AATTAATAGGTCCAGTATGT+TGG | + | chr2_1:73553430-73553449 | None:intergenic | 30.0% | |
| TGGACCTATTAATTTCATGT+TGG | - | chr2_1:73553436-73553455 | Msa0223860:intron | 30.0% | |
| !!! | TCATGTTGGAGTAACTTTTT+TGG | - | chr2_1:73553450-73553469 | Msa0223860:intron | 30.0% |
| !!! | GGATTTTTGGTTATTTGTCT+AGG | - | chr2_1:73553471-73553490 | Msa0223860:intron | 30.0% |
| AGTATTATCTGGACAATTCT+CGG | + | chr2_1:73553578-73553597 | None:intergenic | 30.0% | |
| CCTATTCGTATAGTATTATC+TGG | + | chr2_1:73553589-73553608 | None:intergenic | 30.0% | |
| CCAGATAATACTATACGAAT+AGG | - | chr2_1:73553586-73553605 | Msa0223860:intron | 30.0% | |
| TTAGTCCTATATAAACAGCT+CGG | + | chr2_1:73553647-73553666 | None:intergenic | 30.0% | |
| ACTTGTTTGGATACAAATGA+TGG | - | chr2_1:73553760-73553779 | Msa0223860:intron | 30.0% | |
| CTTGTTTGGATACAAATGAT+GGG | - | chr2_1:73553761-73553780 | Msa0223860:intron | 30.0% | |
| TACTTGGATACACATTCAAT+AGG | + | chr2_1:73553861-73553880 | None:intergenic | 30.0% | |
| ATTGAATGTGTATCCAAGTA+TGG | - | chr2_1:73553861-73553880 | Msa0223860:intron | 30.0% | |
| TCTAACAAATGTTCCATACT+TGG | + | chr2_1:73553877-73553896 | None:intergenic | 30.0% | |
| AGTCATGAACATTGTTATCA+TGG | - | chr2_1:73554042-73554061 | Msa0223860:CDS | 30.0% | |
| ! | TTTAACTGCTCTTGATTTGA+AGG | + | chr2_1:73554109-73554128 | None:intergenic | 30.0% |
| GTTCATAAGAATATAGGAAC+CGG | - | chr2_1:73554188-73554207 | Msa0223860:intron | 30.0% | |
| ! | AAAAGTTATACACGGATTAC+TGG | + | chr2_1:73554245-73554264 | None:intergenic | 30.0% |
| ! | GTTATTTCAATAGACCTTAG+AGG | - | chr2_1:73554382-73554401 | Msa0223860:five_prime_UTR | 30.0% |
| AATTATACTCACTTCCTCTA+AGG | + | chr2_1:73554399-73554418 | None:intergenic | 30.0% | |
| GGAAAGAACATTATGACATG+TGG | + | chr2_1:73549137-73549156 | None:intergenic | 35.0% | |
| GATGGTATAAGTGAGTTACA+AGG | + | chr2_1:73549158-73549177 | None:intergenic | 35.0% | |
| TTGTACTTGTAGAGACTATG+AGG | + | chr2_1:73549481-73549500 | None:intergenic | 35.0% | |
| ATTTATTAACCAGGAAGAGC+AGG | - | chr2_1:73549946-73549965 | Msa0223860:CDS | 35.0% | |
| TTTATTAACCAGGAAGAGCA+GGG | - | chr2_1:73549947-73549966 | Msa0223860:CDS | 35.0% | |
| TTTCACTCATTATGAGAGAG+AGG | + | chr2_1:73550172-73550191 | None:intergenic | 35.0% | |
| GAAAGATGCAATTGTTTGTG+TGG | - | chr2_1:73550561-73550580 | Msa0223860:CDS | 35.0% | |
| CTGACACCAAAGAAAGATAA+AGG | - | chr2_1:73550595-73550614 | Msa0223860:intron | 35.0% | |
| TGCTGGAATGGAGATATTAA+GGG | + | chr2_1:73550937-73550956 | None:intergenic | 35.0% | |
| TTGCTGGAATGGAGATATTA+AGG | + | chr2_1:73550938-73550957 | None:intergenic | 35.0% | |
| ACTTCCATTCCAATCATAGA+TGG | - | chr2_1:73550957-73550976 | Msa0223860:intron | 35.0% | |
| ! | TTTTTCCAGCCATCTATGAT+TGG | + | chr2_1:73550969-73550988 | None:intergenic | 35.0% |
| TTGCTTCAGTAAATACACGT+AGG | - | chr2_1:73551182-73551201 | Msa0223860:CDS | 35.0% | |
| ! | CGAATGAAGACTCTTTTTGA+AGG | - | chr2_1:73551221-73551240 | Msa0223860:CDS | 35.0% |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | - | chr2_1:73551403-73551422 | Msa0223860:intron | 35.0% |
| !!! | GTCATCCATTTTGAAGTATC+GGG | - | chr2_1:73551404-73551423 | Msa0223860:intron | 35.0% |
| !!! | TCATCCATTTTGAAGTATCG+GGG | - | chr2_1:73551405-73551424 | Msa0223860:intron | 35.0% |
| TGTCAGAACAGATTACACAA+AGG | - | chr2_1:73551624-73551643 | Msa0223860:CDS | 35.0% | |
| GTCAGAACAGATTACACAAA+GGG | - | chr2_1:73551625-73551644 | Msa0223860:CDS | 35.0% | |
| GGAGTATATGGATATGCAAT+TGG | - | chr2_1:73551826-73551845 | Msa0223860:CDS | 35.0% | |
| AACATGAGAAATATGGCCAA+AGG | + | chr2_1:73551988-73552007 | None:intergenic | 35.0% | |
| GATTAATCACTAAAGGCTAG+AGG | + | chr2_1:73552038-73552057 | None:intergenic | 35.0% | |
| TCATGCATATACATCACTTG+AGG | + | chr2_1:73552107-73552126 | None:intergenic | 35.0% | |
| ATTTGTGTAGAGTTGCAACA+GGG | - | chr2_1:73552133-73552152 | Msa0223860:intron | 35.0% | |
| !!! | CTGAAGTTTTAGCTTCTGAA+TGG | + | chr2_1:73552185-73552204 | None:intergenic | 35.0% |
| !! | AACAGAAGCATTAAAAGGCA+TGG | - | chr2_1:73552257-73552276 | Msa0223860:intron | 35.0% |
| AGAAGCCTCAACATTAACAT+TGG | + | chr2_1:73552301-73552320 | None:intergenic | 35.0% | |
| AATAGGCGCCTTATCAATAA+TGG | - | chr2_1:73552390-73552409 | Msa0223860:intron | 35.0% | |
| GAATTTAGTCCCTTAAATCG+TGG | - | chr2_1:73552501-73552520 | Msa0223860:intron | 35.0% | |
| CTCGTTGAAATTTGCGAAAT+AGG | + | chr2_1:73552586-73552605 | None:intergenic | 35.0% | |
| !! | CTTGCTGTAACAATTTTGTC+AGG | - | chr2_1:73552771-73552790 | Msa0223860:intron | 35.0% |
| !! | CTTTTGCTACTCTTTTTCAC+AGG | - | chr2_1:73553001-73553020 | Msa0223860:intron | 35.0% |
| ! | GTATTATGCTGGCTATTCTT+TGG | - | chr2_1:73553051-73553070 | Msa0223860:intron | 35.0% |
| GAGCTTAAGCTGTTGTTATA+AGG | + | chr2_1:73553241-73553260 | None:intergenic | 35.0% | |
| GCACTAAATTCAGATAGAAC+TGG | + | chr2_1:73553298-73553317 | None:intergenic | 35.0% | |
| GTTCTATCTGAATTTAGTGC+TGG | - | chr2_1:73553298-73553317 | Msa0223860:intron | 35.0% | |
| !!! | TGTTTTTGGATCCAACATAC+TGG | - | chr2_1:73553416-73553435 | Msa0223860:intron | 35.0% |
| AAGGATTGCAAACAAGAACA+AGG | + | chr2_1:73553525-73553544 | None:intergenic | 35.0% | |
| GTATTATCTGGACAATTCTC+GGG | + | chr2_1:73553577-73553596 | None:intergenic | 35.0% | |
| ATAGGGACAAAAACTACCTT+TGG | + | chr2_1:73553619-73553638 | None:intergenic | 35.0% | |
| TAAACAGCTCGGATTGTATA+GGG | + | chr2_1:73553636-73553655 | None:intergenic | 35.0% | |
| ATAAACAGCTCGGATTGTAT+AGG | + | chr2_1:73553637-73553656 | None:intergenic | 35.0% | |
| ACAATCCGAGCTGTTTATAT+AGG | - | chr2_1:73553639-73553658 | Msa0223860:intron | 35.0% | |
| ATTTCTTCATAGGCTTGCAA+TGG | + | chr2_1:73553942-73553961 | None:intergenic | 35.0% | |
| AGAAATATGCTAAGATGGCA+TGG | - | chr2_1:73553956-73553975 | Msa0223860:intron | 35.0% | |
| GAAATATGCTAAGATGGCAT+GGG | - | chr2_1:73553957-73553976 | Msa0223860:intron | 35.0% | |
| CATTGTTATCATGGTTCAGA+TGG | - | chr2_1:73554051-73554070 | Msa0223860:CDS | 35.0% | |
| GAATTCTGTACTTCACAATG+AGG | + | chr2_1:73554087-73554106 | None:intergenic | 35.0% | |
| AAGAATATAGGAACCGGTAT+TGG | - | chr2_1:73554194-73554213 | Msa0223860:intron | 35.0% | |
| ACTCTGATAGACACATACAC+CGG | - | chr2_1:73549603-73549622 | Msa0223860:CDS | 40.0% | |
| GGCAACACACATTATCATGT+CGG | - | chr2_1:73549637-73549656 | Msa0223860:CDS | 40.0% | |
| GTTAGTAGCTAAACTTGGGT+AGG | + | chr2_1:73550115-73550134 | None:intergenic | 40.0% | |
| TCCGTATCGTATCTCGTATT+CGG | + | chr2_1:73550226-73550245 | None:intergenic | 40.0% | |
| !! | ATTTTTCCGTATCGGCGTAT+CGG | + | chr2_1:73550261-73550280 | None:intergenic | 40.0% |
| AAATCAAGATACGATACGGC+TGG | - | chr2_1:73550286-73550305 | Msa0223860:intron | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | - | chr2_1:73550287-73550306 | Msa0223860:intron | 40.0% | |
| ATGTTAATGTGCTACGAGCT+TGG | + | chr2_1:73550386-73550405 | None:intergenic | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | - | chr2_1:73550566-73550585 | Msa0223860:CDS | 40.0% | |
| TGCAATTGTTTGTGTGGTGT+GGG | - | chr2_1:73550567-73550586 | Msa0223860:CDS | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | - | chr2_1:73550689-73550708 | Msa0223860:CDS | 40.0% | |
| GATACTTCCTGATACGTATC+CGG | + | chr2_1:73550779-73550798 | None:intergenic | 40.0% | |
| ! | GGATACGTATCAGGAAGTAT+CGG | - | chr2_1:73550778-73550797 | Msa0223860:intron | 40.0% |
| !! | GATACGTATCAGGAAGTATC+GGG | - | chr2_1:73550779-73550798 | Msa0223860:intron | 40.0% |
| CTGGAATGGAGATATTAAGG+GGG | + | chr2_1:73550935-73550954 | None:intergenic | 40.0% | |
| GCTGGAATGGAGATATTAAG+GGG | + | chr2_1:73550936-73550955 | None:intergenic | 40.0% | |
| ATGATTGGAATGGAAGTTGC+TGG | + | chr2_1:73550954-73550973 | None:intergenic | 40.0% | |
| ATGGCTGGAAAAAGACTTCT+AGG | - | chr2_1:73550976-73550995 | Msa0223860:intron | 40.0% | |
| GGAAAAAGACTTCTAGGCAA+CGG | - | chr2_1:73550982-73551001 | Msa0223860:intron | 40.0% | |
| TTATCATAATTGGGGCTGAG+AGG | + | chr2_1:73551010-73551029 | None:intergenic | 40.0% | |
| ! | ACACGTAGGAAGTCTCTTTT+TGG | - | chr2_1:73551196-73551215 | Msa0223860:CDS | 40.0% |
| GGAATGTTATGCCTTCTATG+TGG | - | chr2_1:73551847-73551866 | Msa0223860:intron | 40.0% | |
| GCAAGGTTGAATGACTTACA+TGG | + | chr2_1:73552016-73552035 | None:intergenic | 40.0% | |
| GATTTGTGTAGAGTTGCAAC+AGG | - | chr2_1:73552132-73552151 | Msa0223860:intron | 40.0% | |
| GGAAGCCAATGTTAATGTTG+AGG | - | chr2_1:73552293-73552312 | Msa0223860:intron | 40.0% | |
| ! | GACGGACCTTTTCAATTTCA+AGG | - | chr2_1:73552612-73552631 | Msa0223860:intron | 40.0% |
| !! | GAACAGTTTCTGGTGTACTA+CGG | - | chr2_1:73552873-73552892 | Msa0223860:intron | 40.0% |
| ! | TTTCTGGTGTACTACGGTTA+AGG | - | chr2_1:73552879-73552898 | Msa0223860:intron | 40.0% |
| TGAGCAATTCTTGACATGGA+AGG | + | chr2_1:73553267-73553286 | None:intergenic | 40.0% | |
| ! | GCTTTGAGCAATTCTTGACA+TGG | + | chr2_1:73553271-73553290 | None:intergenic | 40.0% |
| !! | GGTTGGTAGGTATAATTTGG+TGG | + | chr2_1:73553556-73553575 | None:intergenic | 40.0% |
| !! | TCGGGTTGGTAGGTATAATT+TGG | + | chr2_1:73553559-73553578 | None:intergenic | 40.0% |
| ACGAATAGGTGACATTCCAA+AGG | - | chr2_1:73553600-73553619 | Msa0223860:intron | 40.0% | |
| ! | AATGATGGGAGTTGTGACAA+TGG | - | chr2_1:73553775-73553794 | Msa0223860:intron | 40.0% |
| ACAAAACCATGATCACTCCA+AGG | + | chr2_1:73553996-73554015 | None:intergenic | 40.0% | |
| ! | ATATAGGAACCGGTATTGGA+AGG | - | chr2_1:73554198-73554217 | Msa0223860:intron | 40.0% |
| ! | GCATTTTTGCCTTCCAATAC+CGG | + | chr2_1:73554210-73554229 | None:intergenic | 40.0% |
| GATGTTCATAGCCAAAGGCT+TGG | - | chr2_1:73549362-73549381 | Msa0223860:CDS | 45.0% | |
| CATACACCGGACACAACATT+TGG | - | chr2_1:73549616-73549635 | Msa0223860:CDS | 45.0% | |
| GTGTTGCCAAATGTTGTGTC+CGG | + | chr2_1:73549625-73549644 | None:intergenic | 45.0% | |
| CCGTATCGTATCTCGTATTC+GGG | + | chr2_1:73550225-73550244 | None:intergenic | 45.0% | |
| CCCGAATACGAGATACGATA+CGG | - | chr2_1:73550222-73550241 | Msa0223860:CDS | 45.0% | |
| CACAAGTATCCGTGTGTATC+GGG | - | chr2_1:73550690-73550709 | Msa0223860:CDS | 45.0% | |
| ATACTCTCCGGATACGTATC+AGG | - | chr2_1:73550769-73550788 | Msa0223860:intron | 45.0% | |
| AAATTGAGGCCCATCCTTGA+GGG | + | chr2_1:73550855-73550874 | None:intergenic | 45.0% | |
| AAAATTGAGGCCCATCCTTG+AGG | + | chr2_1:73550856-73550875 | None:intergenic | 45.0% | |
| TGGAATGGAAGTTGCTGGAA+TGG | + | chr2_1:73550949-73550968 | None:intergenic | 45.0% | |
| CCAGCCATCTATGATTGGAA+TGG | + | chr2_1:73550964-73550983 | None:intergenic | 45.0% | |
| CCATTCCAATCATAGATGGC+TGG | - | chr2_1:73550961-73550980 | Msa0223860:intron | 45.0% | |
| GAAGCCCCGATACTTCAAAA+TGG | + | chr2_1:73551412-73551431 | None:intergenic | 45.0% | |
| ATCACTAAAGGCTAGAGGCA+AGG | + | chr2_1:73552033-73552052 | None:intergenic | 45.0% | |
| !! | CAACAGGGCTAGTTCTTGTA+GGG | - | chr2_1:73552148-73552167 | Msa0223860:intron | 45.0% |
| AGGCATGGAGAGTAACTTGA+TGG | - | chr2_1:73552272-73552291 | Msa0223860:intron | 45.0% | |
| GGAGAGACAGTAGAGCAAAT+AGG | + | chr2_1:73552647-73552666 | None:intergenic | 45.0% | |
| TGGTGTACTACGGTTAAGGA+GGG | - | chr2_1:73552883-73552902 | Msa0223860:intron | 45.0% | |
| !! | ACAGGCTTGTTGTACTTTGC+TGG | - | chr2_1:73553019-73553038 | Msa0223860:intron | 45.0% |
| !! | TAATTTGGTGGCGCTGAGAA+AGG | + | chr2_1:73553544-73553563 | None:intergenic | 45.0% |
| TATCTGGACAATTCTCGGGT+TGG | + | chr2_1:73553573-73553592 | None:intergenic | 45.0% | |
| TAGGCTTGCAATGGTCAACA+AGG | + | chr2_1:73553933-73553952 | None:intergenic | 45.0% | |
| TATGCTAAGATGGCATGGGT+AGG | - | chr2_1:73553961-73553980 | Msa0223860:intron | 45.0% | |
| TAAGATGGCATGGGTAGGAA+TGG | - | chr2_1:73553966-73553985 | Msa0223860:intron | 45.0% | |
| ! | TCATGGTTCAGATGGTTCTG+TGG | - | chr2_1:73554059-73554078 | Msa0223860:CDS | 45.0% |
| !! | AAAAAATAAAATCATAAAAA+TGG | - | chr2_1:73549846-73549865 | Msa0223860:intron | 5.0% |
| !! | ATATATATTATATATTAAAG+GGG | - | chr2_1:73554351-73554370 | Msa0223860:intron | 5.0% |
| TTACCTGCAGCAGAATCACC+AGG | + | chr2_1:73549447-73549466 | None:intergenic | 50.0% | |
| ! | GTCTTGGTATCGGACGACTT+TGG | + | chr2_1:73550471-73550490 | None:intergenic | 50.0% |
| GTCCGATACCAAGACTTCGA+CGG | - | chr2_1:73550476-73550495 | Msa0223860:intron | 50.0% | |
| CACCGTCGAAGTCTTGGTAT+CGG | + | chr2_1:73550481-73550500 | None:intergenic | 50.0% | |
| ! | CGGGACGTATCGGAAAGTAT+CGG | - | chr2_1:73550709-73550728 | Msa0223860:CDS | 50.0% |
| TGCAAACAGCTCAAACGAGC+TGG | - | chr2_1:73550825-73550844 | Msa0223860:intron | 50.0% | |
| GCAAACAGCTCAAACGAGCT+GGG | - | chr2_1:73550826-73550845 | Msa0223860:intron | 50.0% | |
| TCGGCTCAGGGAATGAAAAG+AGG | + | chr2_1:73551316-73551335 | None:intergenic | 50.0% | |
| !! | GCAACAGGGCTAGTTCTTGT+AGG | - | chr2_1:73552147-73552166 | Msa0223860:intron | 50.0% |
| CTGGTGTACTACGGTTAAGG+AGG | - | chr2_1:73552882-73552901 | Msa0223860:intron | 50.0% | |
| !! | TGGACAATTCTCGGGTTGGT+AGG | + | chr2_1:73553569-73553588 | None:intergenic | 50.0% |
| TGGGTAGGAATGGTGTTCCT+TGG | - | chr2_1:73553976-73553995 | Msa0223860:intron | 50.0% | |
| GGTGTTCCTTGGAGTGATCA+TGG | - | chr2_1:73553987-73554006 | Msa0223860:intron | 50.0% | |
| GAAGCACAAGCTGTCTCACC+TGG | - | chr2_1:73549426-73549445 | Msa0223860:CDS | 55.0% | |
| TCACCTGGTGATTCTGCTGC+AGG | - | chr2_1:73549441-73549460 | Msa0223860:CDS | 55.0% | |
| !! | CACATGTGTCGGTGTCACGT+CGG | - | chr2_1:73549690-73549709 | Msa0223860:CDS | 55.0% |
| AACCAGGAAGAGCAGGGCTA+AGG | - | chr2_1:73549953-73549972 | Msa0223860:CDS | 55.0% | |
| TTCCTTAGCCCTGCTCTTCC+TGG | + | chr2_1:73549958-73549977 | None:intergenic | 55.0% | |
| GAGCAGGGCTAAGGAATTCC+TGG | - | chr2_1:73549962-73549981 | Msa0223860:CDS | 55.0% | |
| ! | ACTGCACCGATACGCCGATA+CGG | - | chr2_1:73550252-73550271 | Msa0223860:CDS | 55.0% |
| CGATACCAAGACTTCGACGG+TGG | - | chr2_1:73550479-73550498 | Msa0223860:intron | 55.0% | |
| TTTGGCCACCGTCGAAGTCT+TGG | + | chr2_1:73550487-73550506 | None:intergenic | 55.0% | |
| AAAGTGGTCGCCGTCCACTT+TGG | + | chr2_1:73550505-73550524 | None:intergenic | 55.0% | |
| AAAGTGGACGGCGACCACTT+TGG | - | chr2_1:73550504-73550523 | Msa0223860:intron | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | + | chr2_1:73550702-73550721 | None:intergenic | 55.0% | |
| CCGTGTGTATCGGGACGTAT+CGG | - | chr2_1:73550699-73550718 | Msa0223860:CDS | 55.0% | |
| !! | ATCAGGAAGTATCGGGCAGC+AGG | - | chr2_1:73550786-73550805 | Msa0223860:intron | 55.0% |
| !! | TCAGGAAGTATCGGGCAGCA+GGG | - | chr2_1:73550787-73550806 | Msa0223860:intron | 55.0% |
| TCCCTGAGAATTCGGAGGCT+CGG | + | chr2_1:73551335-73551354 | None:intergenic | 55.0% | |
| AGCCTCCGAATTCTCAGGGA+CGG | - | chr2_1:73551335-73551354 | Msa0223860:intron | 55.0% | |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr2_1:73551371-73551390 | Msa0223860:intron | 55.0% |
| TATCGGTGCAGGATACGCAG+GGG | - | chr2_1:73551372-73551391 | Msa0223860:intron | 55.0% | |
| TGCAGGATACGCAGGGGATA+CGG | - | chr2_1:73551378-73551397 | Msa0223860:intron | 55.0% | |
| !! | TGTCGGTGTCACGTCGGAGT+CGG | - | chr2_1:73549696-73549715 | Msa0223860:CDS | 60.0% |
| GACTTCGACGGTGGCCAAAG+TGG | - | chr2_1:73550488-73550507 | Msa0223860:intron | 60.0% | |
| TCGACGGTGGCCAAAGTGGA+CGG | - | chr2_1:73550492-73550511 | Msa0223860:intron | 60.0% | |
| !! | CAGGAAGTATCGGGCAGCAG+GGG | - | chr2_1:73550788-73550807 | Msa0223860:intron | 60.0% |
| GAGCTGTTTGCACCCCCTCA+GGG | + | chr2_1:73550817-73550836 | None:intergenic | 60.0% | |
| TGAGCTGTTTGCACCCCCTC+AGG | + | chr2_1:73550818-73550837 | None:intergenic | 60.0% | |
| TTGAGGCCCATCCTTGAGGG+AGG | + | chr2_1:73550852-73550871 | None:intergenic | 60.0% | |
| GAATTCGGAGGCTCGGCTCA+GGG | + | chr2_1:73551328-73551347 | None:intergenic | 60.0% | |
| AGAATTCGGAGGCTCGGCTC+AGG | + | chr2_1:73551329-73551348 | None:intergenic | 60.0% | |
| AGCCGAGCCTCCGAATTCTC+AGG | - | chr2_1:73551330-73551349 | Msa0223860:intron | 60.0% | |
| GCCGAGCCTCCGAATTCTCA+GGG | - | chr2_1:73551331-73551350 | Msa0223860:intron | 60.0% | |
| CAGGGCCGTCCCTGAGAATT+CGG | + | chr2_1:73551343-73551362 | None:intergenic | 60.0% | |
| ATTCTCAGGGACGGCCCTGT+CGG | - | chr2_1:73551344-73551363 | Msa0223860:intron | 60.0% | |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr2_1:73551370-73551389 | Msa0223860:intron | 60.0% |
| AACGAGCTGGGCCTCCCTCA+AGG | - | chr2_1:73550838-73550857 | Msa0223860:intron | 65.0% | |
| AGCTGGGCCTCCCTCAAGGA+TGG | - | chr2_1:73550842-73550861 | Msa0223860:intron | 65.0% | |
| GCTGGGCCTCCCTCAAGGAT+GGG | - | chr2_1:73550843-73550862 | Msa0223860:intron | 65.0% | |
| GGCCGTCCCTGAGAATTCGG+AGG | + | chr2_1:73551340-73551359 | None:intergenic | 65.0% | |
| TTCTCAGGGACGGCCCTGTC+GGG | - | chr2_1:73551345-73551364 | Msa0223860:intron | 65.0% | |
| ! | GCACCGATACCTGCCCGACA+GGG | + | chr2_1:73551361-73551380 | None:intergenic | 65.0% |
| ! | TGCACCGATACCTGCCCGAC+AGG | + | chr2_1:73551362-73551381 | None:intergenic | 65.0% |
| !! | TGTCGGGCAGGTATCGGTGC+AGG | - | chr2_1:73551361-73551380 | Msa0223860:intron | 65.0% |
| CGGCCCTGTCGGGCAGGTAT+CGG | - | chr2_1:73551355-73551374 | Msa0223860:intron | 70.0% | |
| !! | GGCAGCAGGGGCGTCCCTGA+GGG | - | chr2_1:73550800-73550819 | Msa0223860:intron | 75.0% |
| !! | GCAGCAGGGGCGTCCCTGAG+GGG | - | chr2_1:73550801-73550820 | Msa0223860:intron | 75.0% |
| !! | CAGCAGGGGCGTCCCTGAGG+GGG | - | chr2_1:73550802-73550821 | Msa0223860:intron | 75.0% |
| !!! | GGGCAGCAGGGGCGTCCCTG+AGG | - | chr2_1:73550799-73550818 | Msa0223860:intron | 80.0% |
| ! | CAGGGACGGCCCTGTCGGGC+AGG | - | chr2_1:73551349-73551368 | Msa0223860:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73549045 | 73554430 | 73549045 | ID=Msa0223860;Name=Msa0223860 |
| chr2_1 | mRNA | 73549045 | 73554430 | 73549045 | ID=Msa0223860-mRNA-1;Parent=Msa0223860;Name=Msa0223860-mRNA-1;_AED=0.12;_eAED=0.12;_QI=80|0.8|0.81|1|0.9|0.81|11|287|498 |
| chr2_1 | exon | 73549045 | 73549730 | 73549045 | ID=Msa0223860-mRNA-1:exon:21612;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73549854 | 73549982 | 73549854 | ID=Msa0223860-mRNA-1:exon:21611;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73550133 | 73550283 | 73550133 | ID=Msa0223860-mRNA-1:exon:21610;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73550370 | 73550452 | 73550370 | ID=Msa0223860-mRNA-1:exon:21609;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73550560 | 73550596 | 73550560 | ID=Msa0223860-mRNA-1:exon:21608;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73550683 | 73550741 | 73550683 | ID=Msa0223860-mRNA-1:exon:21607;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73551113 | 73551332 | 73551113 | ID=Msa0223860-mRNA-1:exon:21606;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73551459 | 73551664 | 73551459 | ID=Msa0223860-mRNA-1:exon:21605;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73551745 | 73551857 | 73551745 | ID=Msa0223860-mRNA-1:exon:21604;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73554013 | 73554131 | 73554013 | ID=Msa0223860-mRNA-1:exon:21603;Parent=Msa0223860-mRNA-1 |
| chr2_1 | exon | 73554370 | 73554430 | 73554370 | ID=Msa0223860-mRNA-1:exon:21602;Parent=Msa0223860-mRNA-1 |
| chr2_1 | five_prime_UTR | 73554370 | 73554430 | 73554370 | ID=Msa0223860-mRNA-1:five_prime_utr;Parent=Msa0223860-mRNA-1 |
| chr2_1 | five_prime_UTR | 73554113 | 73554131 | 73554113 | ID=Msa0223860-mRNA-1:five_prime_utr;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73554013 | 73554112 | 73554013 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73551745 | 73551857 | 73551745 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73551459 | 73551664 | 73551459 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73551113 | 73551332 | 73551113 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73550683 | 73550741 | 73550683 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73550560 | 73550596 | 73550560 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73550370 | 73550452 | 73550370 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73550133 | 73550283 | 73550133 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73549854 | 73549982 | 73549854 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | CDS | 73549332 | 73549730 | 73549332 | ID=Msa0223860-mRNA-1:cds;Parent=Msa0223860-mRNA-1 |
| chr2_1 | three_prime_UTR | 73549045 | 73549331 | 73549045 | ID=Msa0223860-mRNA-1:three_prime_utr;Parent=Msa0223860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
