Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223930 | XP_003597541.1 | 96.868 | 447 | 14 | 0 | 3 | 449 | 2 | 448 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223930 | sp|Q9NU19|TB22B_HUMAN | 51.852 | 324 | 152 | 2 | 124 | 446 | 182 | 502 | 6.75e-117 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223930 | G7IS12 | 96.868 | 447 | 14 | 0 | 3 | 449 | 2 | 448 | 0.0 | 910 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223930 | Msa0265170 | 0.899386 | 2.086938e-77 | -8.615850e-47 |
| Msa0223930 | Msa0340590 | 0.841334 | 5.062114e-58 | -8.615850e-47 |
| Msa0223930 | Msa1144620 | 0.813821 | 2.108302e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223930 | MtrunA17_Chr2g0329691 | 96.868 | 447 | 14 | 0 | 3 | 449 | 2 | 448 | 0.0 | 910 |
| Msa0223930 | MtrunA17_Chr4g0033831 | 79.452 | 438 | 88 | 1 | 14 | 449 | 18 | 455 | 0.0 | 725 |
| Msa0223930 | MtrunA17_Chr3g0121451 | 26.608 | 342 | 182 | 9 | 135 | 420 | 88 | 416 | 4.02e-24 | 103 |
| Msa0223930 | MtrunA17_Chr8g0378291 | 26.608 | 342 | 182 | 8 | 135 | 420 | 99 | 427 | 4.65e-21 | 95.1 |
| Msa0223930 | MtrunA17_Chr4g0063771 | 30.172 | 232 | 135 | 6 | 212 | 433 | 80 | 294 | 2.67e-20 | 91.3 |
| Msa0223930 | MtrunA17_Chr6g0456341 | 25.449 | 334 | 174 | 11 | 108 | 417 | 31 | 313 | 8.39e-18 | 84.7 |
| Msa0223930 | MtrunA17_Chr5g0448071 | 25.523 | 239 | 134 | 5 | 145 | 379 | 106 | 304 | 7.77e-16 | 79.0 |
| Msa0223930 | MtrunA17_Chr1g0183581 | 26.103 | 272 | 142 | 11 | 137 | 373 | 60 | 307 | 1.16e-15 | 78.6 |
| Msa0223930 | MtrunA17_Chr4g0064141 | 24.315 | 292 | 182 | 10 | 137 | 416 | 350 | 614 | 2.70e-15 | 78.2 |
| Msa0223930 | MtrunA17_Chr2g0329651 | 26.818 | 220 | 117 | 6 | 203 | 417 | 361 | 541 | 1.58e-14 | 75.9 |
| Msa0223930 | MtrunA17_Chr1g0181831 | 25.000 | 264 | 149 | 10 | 148 | 399 | 298 | 524 | 7.34e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223930 | AT2G30710.1 | 76.566 | 431 | 98 | 2 | 19 | 449 | 13 | 440 | 0.0 | 696 |
| Msa0223930 | AT1G04830.1 | 26.835 | 436 | 236 | 12 | 53 | 420 | 11 | 431 | 1.32e-28 | 117 |
| Msa0223930 | AT1G04830.2 | 26.835 | 436 | 236 | 12 | 53 | 420 | 11 | 431 | 1.50e-28 | 117 |
| Msa0223930 | AT4G13730.3 | 25.146 | 342 | 198 | 6 | 124 | 420 | 96 | 424 | 1.41e-22 | 100 |
| Msa0223930 | AT4G13730.1 | 24.646 | 353 | 197 | 7 | 124 | 420 | 96 | 435 | 2.08e-20 | 93.6 |
| Msa0223930 | AT3G02460.1 | 26.277 | 274 | 147 | 8 | 152 | 417 | 88 | 314 | 4.87e-18 | 85.5 |
| Msa0223930 | AT3G02460.3 | 26.277 | 274 | 147 | 8 | 152 | 417 | 88 | 314 | 7.73e-18 | 85.1 |
| Msa0223930 | AT1G04830.3 | 24.818 | 411 | 253 | 11 | 43 | 420 | 1 | 388 | 1.22e-17 | 85.1 |
| Msa0223930 | AT5G15930.1 | 25.182 | 274 | 152 | 7 | 151 | 417 | 84 | 311 | 1.48e-17 | 84.3 |
| Msa0223930 | AT4G13730.2 | 24.545 | 330 | 176 | 8 | 124 | 397 | 96 | 408 | 1.54e-17 | 84.7 |
| Msa0223930 | AT3G07890.1 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.08e-16 | 82.0 |
| Msa0223930 | AT3G07890.4 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.08e-16 | 82.0 |
| Msa0223930 | AT3G07890.5 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.08e-16 | 82.0 |
| Msa0223930 | AT3G07890.2 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.08e-16 | 82.0 |
| Msa0223930 | AT3G07890.3 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.08e-16 | 82.0 |
| Msa0223930 | AT2G43490.6 | 30.178 | 169 | 94 | 3 | 210 | 377 | 355 | 500 | 1.21e-15 | 80.1 |
| Msa0223930 | AT2G43490.8 | 30.178 | 169 | 94 | 3 | 210 | 377 | 355 | 500 | 1.21e-15 | 80.1 |
| Msa0223930 | AT2G43490.4 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.30e-15 | 79.7 |
| Msa0223930 | AT2G43490.5 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.30e-15 | 79.7 |
| Msa0223930 | AT2G43490.1 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.35e-15 | 79.7 |
| Msa0223930 | AT2G43490.7 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.35e-15 | 79.7 |
| Msa0223930 | AT2G43490.3 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.35e-15 | 79.7 |
| Msa0223930 | AT2G43490.2 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.35e-15 | 79.7 |
| Msa0223930 | AT3G02460.4 | 25.957 | 235 | 124 | 6 | 152 | 379 | 88 | 279 | 2.38e-15 | 77.0 |
| Msa0223930 | AT5G52580.1 | 24.930 | 357 | 219 | 13 | 80 | 416 | 295 | 622 | 4.14e-15 | 78.2 |
| Msa0223930 | AT3G59570.2 | 31.361 | 169 | 92 | 4 | 210 | 377 | 363 | 508 | 4.66e-15 | 78.2 |
| Msa0223930 | AT5G52580.3 | 24.930 | 357 | 219 | 13 | 80 | 416 | 301 | 628 | 4.89e-15 | 77.8 |
| Msa0223930 | AT3G59570.3 | 31.361 | 169 | 92 | 4 | 210 | 377 | 363 | 508 | 5.92e-15 | 77.8 |
| Msa0223930 | AT3G59570.1 | 31.361 | 169 | 92 | 4 | 210 | 377 | 363 | 508 | 6.17e-15 | 77.8 |
| Msa0223930 | AT3G02460.5 | 25.641 | 234 | 124 | 6 | 152 | 378 | 88 | 278 | 1.02e-14 | 74.7 |
| Msa0223930 | AT3G02460.2 | 24.900 | 249 | 137 | 6 | 152 | 393 | 88 | 293 | 1.04e-14 | 75.5 |
| Msa0223930 | AT5G52580.2 | 25.497 | 302 | 180 | 11 | 131 | 416 | 367 | 639 | 3.20e-14 | 75.5 |
| Msa0223930 | AT2G37290.3 | 23.955 | 359 | 222 | 10 | 86 | 435 | 248 | 564 | 1.37e-13 | 73.6 |
| Msa0223930 | AT2G37290.1 | 25.329 | 304 | 177 | 9 | 86 | 380 | 248 | 510 | 1.58e-13 | 73.6 |
| Msa0223930 | AT4G28550.3 | 25.581 | 172 | 101 | 4 | 209 | 377 | 166 | 313 | 4.10e-11 | 64.7 |
Find 136 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAAGATGTTTGTGAATT+TGG | 0.165423 | 2_1:+73661837 | Msa0223930:five_prime_UTR |
| TCGTCTGAGCGTTCCGTATC+AGG | 0.228799 | 2_1:-73664122 | None:intergenic |
| CCATCTTGTCACACGCCTTT+GGG | 0.282740 | 2_1:+73666149 | Msa0223930:CDS |
| TCCATCTTGTCACACGCCTT+TGG | 0.286854 | 2_1:+73666148 | Msa0223930:CDS |
| AAGACAAGCCTTTGAATTCC+TGG | 0.289816 | 2_1:-73665208 | None:intergenic |
| TACCACCCATGGAAGATTTC+CGG | 0.302895 | 2_1:-73662971 | None:intergenic |
| GGAATTCAGCAGAGGCATTT+AGG | 0.303007 | 2_1:-73666945 | None:intergenic |
| TCTGGAACCATGGTTATATT+AGG | 0.309896 | 2_1:+73663038 | Msa0223930:CDS |
| CTTGAACATTTCTGAGGGTT+TGG | 0.311920 | 2_1:-73662052 | None:intergenic |
| TTCCTATCAGAATACTTAGA+AGG | 0.315927 | 2_1:+73665061 | Msa0223930:CDS |
| CACCAACTAATTCAGATAGA+AGG | 0.337858 | 2_1:+73664036 | Msa0223930:CDS |
| TTCAAGCCATATGGAGAATC+AGG | 0.344007 | 2_1:+73665898 | Msa0223930:CDS |
| AAGAAAAGAAAAGTGAAGTT+TGG | 0.349008 | 2_1:+73661800 | Msa0223930:five_prime_UTR |
| CCCTGAACATATCCACTTGC+TGG | 0.349458 | 2_1:-73665004 | None:intergenic |
| GGTAGATCCGATAGATAATT+CGG | 0.350997 | 2_1:+73662673 | Msa0223930:CDS |
| CTTCAGTTGGGTTCTCTACA+TGG | 0.352778 | 2_1:-73662944 | None:intergenic |
| TGTCTTTAAGTTGAAGGAAT+TGG | 0.360423 | 2_1:+73665225 | Msa0223930:CDS |
| TGATATGTTGGAATTTGATT+TGG | 0.362090 | 2_1:-73661958 | None:intergenic |
| CCAGTCCCTGATTCTCCATA+TGG | 0.362525 | 2_1:-73665904 | None:intergenic |
| ATTTCTGAACTTGTGGTTGC+TGG | 0.363338 | 2_1:-73664290 | None:intergenic |
| GCAACATCAGGTACAGTTCT+TGG | 0.375969 | 2_1:-73664261 | None:intergenic |
| CTAAAGGGTCGTAGCATTCC+TGG | 0.383114 | 2_1:+73662629 | Msa0223930:CDS |
| AACAAGCACCACACACTAAA+GGG | 0.384849 | 2_1:-73667021 | None:intergenic |
| TCCAGCAAGTGGATATGTTC+AGG | 0.385704 | 2_1:+73665003 | Msa0223930:CDS |
| GTTGTTCATGGTTGATATGT+TGG | 0.393129 | 2_1:-73661970 | None:intergenic |
| GAGGCATTTAGGCAGCTAAA+TGG | 0.395459 | 2_1:-73666934 | None:intergenic |
| AAGGCTTGTCTTTAAGTTGA+AGG | 0.402702 | 2_1:+73665219 | Msa0223930:CDS |
| GAATTGGTCAGGAGGATTGA+TGG | 0.404086 | 2_1:+73665241 | Msa0223930:CDS |
| CACAATGGAAGCAAGCCATT+TGG | 0.405862 | 2_1:+73662885 | Msa0223930:CDS |
| AGTTCCTCATATAGTGATAC+TGG | 0.414241 | 2_1:+73662722 | Msa0223930:CDS |
| AACACCTTCCAACTCAGAAC+TGG | 0.415204 | 2_1:+73666840 | Msa0223930:CDS |
| TTCTTTGTCAAGGTTACTAA+AGG | 0.415801 | 2_1:+73662613 | Msa0223930:intron |
| TCCCTTCTATCTGAATTAGT+TGG | 0.425652 | 2_1:-73664038 | None:intergenic |
| TTCTTCAATTTGCTTTCCGC+TGG | 0.426482 | 2_1:+73665930 | Msa0223930:CDS |
| TAGAAGGGAGCATAGATAAC+TGG | 0.429552 | 2_1:+73665077 | Msa0223930:CDS |
| GTGAAGTTTGGAGTGGTTGA+AGG | 0.434199 | 2_1:+73661812 | Msa0223930:five_prime_UTR |
| TGCTTGTCAAAATTGCTTGA+TGG | 0.434811 | 2_1:+73665157 | Msa0223930:CDS |
| AATATATACACAAGGAAGTC+AGG | 0.439682 | 2_1:-73666201 | None:intergenic |
| ACTCACCGTAAGAAGAAAAC+TGG | 0.439969 | 2_1:-73666226 | None:intergenic |
| TTCTCCATATGGCTTGAAAC+AGG | 0.439984 | 2_1:-73665893 | None:intergenic |
| TATCTATCGGATCTACCCTC+TGG | 0.446012 | 2_1:-73662667 | None:intergenic |
| TTAAGTTGAAGGAATTGGTC+AGG | 0.452027 | 2_1:+73665230 | Msa0223930:CDS |
| ACTGTAGGACGCATATAATC+TGG | 0.454179 | 2_1:-73663671 | None:intergenic |
| AGATCCTGTTTCAAGCCATA+TGG | 0.461315 | 2_1:+73665889 | Msa0223930:intron |
| TCTGAGTTGGAAGGTGTTGA+AGG | 0.469826 | 2_1:-73666835 | None:intergenic |
| TGCAATGTAATATCTTGTAA+AGG | 0.470702 | 2_1:+73667096 | Msa0223930:three_prime_UTR |
| AACTGAAAATTAACTCCCAT+TGG | 0.475238 | 2_1:-73667191 | None:intergenic |
| AACTCAGAACTGGACTGATC+AGG | 0.476523 | 2_1:+73666850 | Msa0223930:CDS |
| TCTTTGTCAAGGTTACTAAA+GGG | 0.477125 | 2_1:+73662614 | Msa0223930:intron |
| CACTATATGAGGAACTCCTT+TGG | 0.478396 | 2_1:-73662715 | None:intergenic |
| GAGGAACTCCTTTGGTAAGT+TGG | 0.479046 | 2_1:-73662707 | None:intergenic |
| CCATCGTTGGTAGTTCCAAA+TGG | 0.479183 | 2_1:-73662900 | None:intergenic |
| ATAAATTGCGTGAATTAGCT+TGG | 0.481343 | 2_1:+73663639 | Msa0223930:CDS |
| CATCTTCTTCCAGGGCCATT+CGG | 0.484264 | 2_1:+73664978 | Msa0223930:intron |
| TTCAGTTGGGTTCTCTACAT+GGG | 0.488921 | 2_1:-73662943 | None:intergenic |
| ATTTCCGGACTTCTTCAGTT+GGG | 0.489184 | 2_1:-73662956 | None:intergenic |
| AAGTTCACAAAGGTTCTCTC+TGG | 0.491096 | 2_1:+73663020 | Msa0223930:CDS |
| TTGCAAAATACAAGTAAGAA+TGG | 0.496112 | 2_1:-73667078 | None:intergenic |
| CCCAAAGGCGTGTGACAAGA+TGG | 0.496262 | 2_1:-73666149 | None:intergenic |
| TTTGGTTGAATCGAGAATCA+AGG | 0.499333 | 2_1:-73662034 | None:intergenic |
| TCCTATCAGAATACTTAGAA+GGG | 0.501199 | 2_1:+73665062 | Msa0223930:CDS |
| TGTGCCAGTATCACTATATG+AGG | 0.509178 | 2_1:-73662726 | None:intergenic |
| TCCAGTGATTTCTGAACTTG+TGG | 0.509701 | 2_1:-73664297 | None:intergenic |
| AAACAAGCACCACACACTAA+AGG | 0.510138 | 2_1:-73667022 | None:intergenic |
| GTAGATCCGATAGATAATTC+GGG | 0.510981 | 2_1:+73662674 | Msa0223930:CDS |
| TGATCAGTCCAGTTCTGAGT+TGG | 0.511650 | 2_1:-73666848 | None:intergenic |
| GATTTCCGGACTTCTTCAGT+TGG | 0.513734 | 2_1:-73662957 | None:intergenic |
| TGAGATCAGCATGCTTCGCC+AGG | 0.514763 | 2_1:+73664145 | Msa0223930:CDS |
| ATGTAGAGGCTGACTGCTAT+TGG | 0.515608 | 2_1:+73665134 | Msa0223930:CDS |
| TCAGTTATTGATGATTTGGA+TGG | 0.516262 | 2_1:+73667208 | Msa0223930:three_prime_UTR |
| GTATTATGATATTCCTGATA+CGG | 0.517822 | 2_1:+73664109 | Msa0223930:CDS |
| CCAGCAAGTGGATATGTTCA+GGG | 0.518965 | 2_1:+73665004 | Msa0223930:CDS |
| TGCTGGAAGAATGCAACATC+AGG | 0.522302 | 2_1:-73664273 | None:intergenic |
| TCCCTTCTAAGTATTCTGAT+AGG | 0.522873 | 2_1:-73665063 | None:intergenic |
| TACAGTGTGGAGACTTCTCT+TGG | 0.524492 | 2_1:+73663688 | Msa0223930:CDS |
| CAAACCCTCAGAAATGTTCA+AGG | 0.526816 | 2_1:+73662053 | Msa0223930:CDS |
| AGTTTGGAGTGGTTGAAGGA+AGG | 0.526855 | 2_1:+73661816 | Msa0223930:five_prime_UTR |
| AGAACCCAACTGAAGAAGTC+CGG | 0.535528 | 2_1:+73662952 | Msa0223930:CDS |
| CATACCCTTGAACATTTCTG+AGG | 0.538182 | 2_1:-73662058 | None:intergenic |
| TCGAGAATCAAGGATTCCTA+TGG | 0.544935 | 2_1:-73662024 | None:intergenic |
| ATCTATCGGATCTACCCTCT+GGG | 0.548642 | 2_1:-73662666 | None:intergenic |
| CTTGCAATGTCAACAACCAA+TGG | 0.553374 | 2_1:+73667175 | Msa0223930:three_prime_UTR |
| ATCAGTAGTCCTACCACCCA+TGG | 0.554168 | 2_1:-73662982 | None:intergenic |
| AGAAGTCCGGAAATCTTCCA+TGG | 0.554526 | 2_1:+73662965 | Msa0223930:CDS |
| TTGCAATGTCAACAACCAAT+GGG | 0.554729 | 2_1:+73667176 | Msa0223930:three_prime_UTR |
| TTGCTCAACCAGGAATTCAA+AGG | 0.558227 | 2_1:+73665200 | Msa0223930:CDS |
| TACTCTCTCGTGCATTTATG+TGG | 0.564315 | 2_1:+73666885 | Msa0223930:CDS |
| CATTACACATTTGCTCAACC+AGG | 0.564692 | 2_1:+73665190 | Msa0223930:CDS |
| AAAGGTTCTCTCTGGAACCA+TGG | 0.569589 | 2_1:+73663028 | Msa0223930:CDS |
| AGTTGGGTTCTCTACATGGG+AGG | 0.571413 | 2_1:-73662940 | None:intergenic |
| ACCAACTAATTCAGATAGAA+GGG | 0.572533 | 2_1:+73664037 | Msa0223930:CDS |
| GCCATTCGGCATCCAGCAAG+TGG | 0.577019 | 2_1:+73664992 | Msa0223930:CDS |
| CCATATGGAGAATCAGGGAC+TGG | 0.579566 | 2_1:+73665904 | Msa0223930:CDS |
| TGTAATATCTTGTAAAGGAG+AGG | 0.580056 | 2_1:+73667101 | Msa0223930:three_prime_UTR |
| ATACACAAGGAAGTCAGGTA+AGG | 0.582696 | 2_1:-73666196 | None:intergenic |
| TCGTGCAACTGAAACAATAG+AGG | 0.583962 | 2_1:+73662754 | Msa0223930:CDS |
| GTAAAATCTTATTGACCCAG+AGG | 0.584370 | 2_1:+73662651 | Msa0223930:CDS |
| TACAGTTCTTGGACAATCAA+CGG | 0.584447 | 2_1:-73664250 | None:intergenic |
| ATTTAGGCAGCTAAATGGCT+AGG | 0.588967 | 2_1:-73666929 | None:intergenic |
| AGTTGAAGGAATTGGTCAGG+AGG | 0.592078 | 2_1:+73665233 | Msa0223930:CDS |
| AAGGCGTGTGACAAGATGGA+AGG | 0.595513 | 2_1:-73666145 | None:intergenic |
| GGAAATCTTCCATGGGTGGT+AGG | 0.596520 | 2_1:+73662973 | Msa0223930:CDS |
| TCCACTTGCTGGATGCCGAA+TGG | 0.597438 | 2_1:-73664993 | None:intergenic |
| ATACCCTTGAACATTTCTGA+GGG | 0.600688 | 2_1:-73662057 | None:intergenic |
| ACCACAAGTTCAGAAATCAC+TGG | 0.601882 | 2_1:+73664296 | Msa0223930:CDS |
| TATAAGCCCGAATTATCTAT+CGG | 0.604731 | 2_1:-73662680 | None:intergenic |
| AAGAAAAGTGAAGTTTGGAG+TGG | 0.605523 | 2_1:+73661805 | Msa0223930:five_prime_UTR |
| GACTGATCAGGAACTCGAGA+TGG | 0.605616 | 2_1:+73666862 | Msa0223930:CDS |
| TGGGACACATATCTAGCTGA+AGG | 0.612669 | 2_1:+73666168 | Msa0223930:CDS |
| GACAAAGACACTAGTACCAT+AGG | 0.614049 | 2_1:+73662008 | Msa0223930:CDS |
| ACTAATTCAGATAGAAGGGA+GGG | 0.621364 | 2_1:+73664041 | Msa0223930:CDS |
| CAGTCCAGTTCTGAGTTGGA+AGG | 0.623870 | 2_1:-73666844 | None:intergenic |
| CAGCTAGATATGTGTCCCAA+AGG | 0.627022 | 2_1:-73666164 | None:intergenic |
| AGATAAAATCTCTAATGTAG+AGG | 0.630211 | 2_1:+73665120 | Msa0223930:CDS |
| TCAAGCCATATGGAGAATCA+GGG | 0.631147 | 2_1:+73665899 | Msa0223930:CDS |
| GTCCGGAAATCTTCCATGGG+TGG | 0.634104 | 2_1:+73662969 | Msa0223930:CDS |
| AGGCGTGTGACAAGATGGAA+GGG | 0.635093 | 2_1:-73666144 | None:intergenic |
| GAAGTCCGGAAATCTTCCAT+GGG | 0.635178 | 2_1:+73662966 | Msa0223930:CDS |
| AAGTATACCTAATATAACCA+TGG | 0.637927 | 2_1:-73663045 | None:intergenic |
| ACAAGCACCACACACTAAAG+GGG | 0.638528 | 2_1:-73667020 | None:intergenic |
| TAAAATCTTATTGACCCAGA+GGG | 0.642301 | 2_1:+73662652 | Msa0223930:CDS |
| AACTAATTCAGATAGAAGGG+AGG | 0.643726 | 2_1:+73664040 | Msa0223930:CDS |
| AAACCCTCAGAAATGTTCAA+GGG | 0.645133 | 2_1:+73662054 | Msa0223930:CDS |
| AAGAGAAGTCTCCACACTGT+AGG | 0.654955 | 2_1:-73663686 | None:intergenic |
| TGGAGCGTATTCTTTACGCA+TGG | 0.656098 | 2_1:+73664316 | Msa0223930:CDS |
| TATACTCACCAACTTACCAA+AGG | 0.657656 | 2_1:+73662699 | Msa0223930:CDS |
| CAGCAAGTGGATATGTTCAG+GGG | 0.660340 | 2_1:+73665005 | Msa0223930:CDS |
| AAGAGTTATGAAGTTCACAA+AGG | 0.667469 | 2_1:+73663010 | Msa0223930:CDS |
| ATTATATGCGTCCTACAGTG+TGG | 0.667641 | 2_1:+73663675 | Msa0223930:CDS |
| AACTGGCAAATATATACACA+AGG | 0.671598 | 2_1:-73666209 | None:intergenic |
| TAAATACAGGAATTCAGCAG+AGG | 0.673718 | 2_1:-73666953 | None:intergenic |
| TTGCGTGAATTAGCTTGGAG+TGG | 0.688224 | 2_1:+73663644 | Msa0223930:CDS |
| TTAGAAGACAGTTGAACCAG+CGG | 0.695324 | 2_1:-73665946 | None:intergenic |
| CCATTTGGAACTACCAACGA+TGG | 0.701364 | 2_1:+73662900 | Msa0223930:CDS |
| ATACAGGAAGAAGTTCACAA+TGG | 0.706853 | 2_1:+73662870 | Msa0223930:intron |
| CAACTGTCTTCTAATCCGCG+AGG | 0.710013 | 2_1:+73665955 | Msa0223930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATCAACTTTTTTAAT+GGG | - | chr2_1:73662237-73662256 | None:intergenic | 10.0% |
| !!! | AAAAAAATCAACTTTTTTAA+TGG | - | chr2_1:73662238-73662257 | None:intergenic | 10.0% |
| !! | AAACTAAATAAATATTATTC+AGG | - | chr2_1:73663557-73663576 | None:intergenic | 10.0% |
| !!! | ATTTTGAAAAAGAATAATTA+GGG | + | chr2_1:73663906-73663925 | Msa0223930:intron | 10.0% |
| !! | AAACTTAAACAAAAAGAAAA+AGG | + | chr2_1:73661771-73661790 | Msa0223930:five_prime_UTR | 15.0% |
| !! | AAACAAAACAAATTACTAAT+TGG | - | chr2_1:73662538-73662557 | None:intergenic | 15.0% |
| !!! | ATTTTACTATTCATATTTTG+TGG | + | chr2_1:73662779-73662798 | Msa0223930:intron | 15.0% |
| !! | AAATATCAAGTTATTTAGAA+TGG | - | chr2_1:73663205-73663224 | None:intergenic | 15.0% |
| !! | ATATCTAAACAAATTATTGA+GGG | + | chr2_1:73663805-73663824 | Msa0223930:intron | 15.0% |
| !!! | GATTTTGAAAAAGAATAATT+AGG | + | chr2_1:73663905-73663924 | Msa0223930:intron | 15.0% |
| !!! | TTTTGAAAAAGAATAATTAG+GGG | + | chr2_1:73663907-73663926 | Msa0223930:intron | 15.0% |
| !! | ACTAGAATGAAAATAATATA+AGG | - | chr2_1:73664369-73664388 | None:intergenic | 15.0% |
| !! | AAATGTATGTTTATATATCA+TGG | + | chr2_1:73664932-73664951 | Msa0223930:intron | 15.0% |
| !! | AACAACACTATAATTAATAA+AGG | + | chr2_1:73666025-73666044 | Msa0223930:intron | 15.0% |
| !! | ACAACACTATAATTAATAAA+GGG | + | chr2_1:73666026-73666045 | Msa0223930:intron | 15.0% |
| !! | AAACAAATTACAATATAAAC+GGG | - | chr2_1:73666265-73666284 | None:intergenic | 15.0% |
| !! | CAAACAAATTACAATATAAA+CGG | - | chr2_1:73666266-73666285 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTTTTACTGTCT+AGG | + | chr2_1:73666654-73666673 | Msa0223930:intron | 15.0% |
| !!! | GAAAAGATAATATTTTTGCA+AGG | - | chr2_1:73662112-73662131 | None:intergenic | 20.0% |
| !! | TGATAAACTAATCAACAAAT+CGG | - | chr2_1:73662198-73662217 | None:intergenic | 20.0% |
| !!! | TTTGTTGATTAGTTTATCAT+CGG | + | chr2_1:73662199-73662218 | Msa0223930:intron | 20.0% |
| !! | AATTGTTATGAAATGAAATG+TGG | + | chr2_1:73662381-73662400 | Msa0223930:intron | 20.0% |
| !! | AACAACATATCAATTGTATA+AGG | - | chr2_1:73662594-73662613 | None:intergenic | 20.0% |
| !! | ATATACATTTATGAGACTTA+TGG | + | chr2_1:73662814-73662833 | Msa0223930:intron | 20.0% |
| !!! | AGTAGTTAATTTTTTAGTAG+TGG | - | chr2_1:73663441-73663460 | None:intergenic | 20.0% |
| !! | ACAAGTTTAACATTGAAAAA+TGG | - | chr2_1:73663581-73663600 | None:intergenic | 20.0% |
| !! | ATAGTTAAGGATGAAAATTA+TGG | - | chr2_1:73663612-73663631 | None:intergenic | 20.0% |
| !! | GATATCTAAACAAATTATTG+AGG | + | chr2_1:73663804-73663823 | Msa0223930:intron | 20.0% |
| !! | GACTTAAAATGATTATCAAT+AGG | - | chr2_1:73663940-73663959 | None:intergenic | 20.0% |
| !!! | GATAATCATTTTAAGTCAAT+AGG | + | chr2_1:73663943-73663962 | Msa0223930:intron | 20.0% |
| !!! | TTTTAGTCAATAATTAAGAG+TGG | - | chr2_1:73664185-73664204 | None:intergenic | 20.0% |
| !! | TTATCAATCAGTAAGATAAT+CGG | - | chr2_1:73664570-73664589 | None:intergenic | 20.0% |
| !!! | TTACTGATTGATAATATTGA+TGG | + | chr2_1:73664576-73664595 | Msa0223930:intron | 20.0% |
| !! | TACATAACACAGTAATAAAT+TGG | + | chr2_1:73664824-73664843 | Msa0223930:intron | 20.0% |
| !!! | GATTTTATCTGAAGATAAAT+CGG | - | chr2_1:73665110-73665129 | None:intergenic | 20.0% |
| !!! | TATGTTTTAAGAAAAACAAC+AGG | - | chr2_1:73665283-73665302 | None:intergenic | 20.0% |
| !!! | TTAAATTTTTGTATGCATCT+TGG | + | chr2_1:73665411-73665430 | Msa0223930:intron | 20.0% |
| !!! | TAAATTTTTGTATGCATCTT+GGG | + | chr2_1:73665412-73665431 | Msa0223930:intron | 20.0% |
| !! | ACAAACAAAATAAGTTAGTT+TGG | - | chr2_1:73665565-73665584 | None:intergenic | 20.0% |
| !!! | TTTTACTTCTCTAAAATTGA+GGG | - | chr2_1:73665657-73665676 | None:intergenic | 20.0% |
| !! | AAACAAATATGTTGAAACTT+AGG | + | chr2_1:73665807-73665826 | Msa0223930:intron | 20.0% |
| !! | AACAAATATGTTGAAACTTA+GGG | + | chr2_1:73665808-73665827 | Msa0223930:intron | 20.0% |
| !! | AGAAATTTATTGAACTTGTA+AGG | - | chr2_1:73665998-73666017 | None:intergenic | 20.0% |
| !! | TATTAAATTTCACGAGATAA+TGG | + | chr2_1:73666055-73666074 | Msa0223930:intron | 20.0% |
| !!! | CGTTTATATTGTAATTTGTT+TGG | + | chr2_1:73666264-73666283 | Msa0223930:intron | 20.0% |
| !!! | TAACTCTTATATTTTCAGTA+TGG | + | chr2_1:73666685-73666704 | Msa0223930:intron | 20.0% |
| !! | CAAATAGAAAAACTAAATAC+AGG | - | chr2_1:73666969-73666988 | None:intergenic | 20.0% |
| !!! | ATTTTCAGTTATTGATGATT+TGG | + | chr2_1:73667204-73667223 | Msa0223930:three_prime_UTR | 20.0% |
| ! | AAGAAAAGAAAAGTGAAGTT+TGG | + | chr2_1:73661800-73661819 | Msa0223930:five_prime_UTR | 25.0% |
| !!! | GAATTTGATTTGGTTTTGTT+TGG | - | chr2_1:73661951-73661970 | None:intergenic | 25.0% |
| ! | TGATATGTTGGAATTTGATT+TGG | - | chr2_1:73661961-73661980 | None:intergenic | 25.0% |
| ! | TAATTTCACCCCTAAAAAAA+TGG | + | chr2_1:73662133-73662152 | Msa0223930:intron | 25.0% |
| ! | AATTTCACCCCTAAAAAAAT+GGG | + | chr2_1:73662134-73662153 | Msa0223930:intron | 25.0% |
| ! | GATAAACTAATCAACAAATC+GGG | - | chr2_1:73662197-73662216 | None:intergenic | 25.0% |
| !! | ATTAGTTTATCATCGGATAT+AGG | + | chr2_1:73662206-73662225 | Msa0223930:intron | 25.0% |
| !!! | ATGATTTTTTCTTAGTGTTG+TGG | + | chr2_1:73662356-73662375 | Msa0223930:intron | 25.0% |
| ! | AATTGTTAAGAACTGAAACA+GGG | - | chr2_1:73662442-73662461 | None:intergenic | 25.0% |
| ! | TAATTGTTAAGAACTGAAAC+AGG | - | chr2_1:73662443-73662462 | None:intergenic | 25.0% |
| !! | CTATTCATATTTTGTGGTTA+TGG | + | chr2_1:73662785-73662804 | Msa0223930:intron | 25.0% |
| !!! | TGTTTTTAATTTACCATCGT+TGG | - | chr2_1:73662916-73662935 | None:intergenic | 25.0% |
| ! | AAGTATACCTAATATAACCA+TGG | - | chr2_1:73663048-73663067 | None:intergenic | 25.0% |
| ! | ACATATGATACTTTCATAAC+TGG | - | chr2_1:73663144-73663163 | None:intergenic | 25.0% |
| ! | AAGTATCATATGTAATTCTG+AGG | + | chr2_1:73663151-73663170 | Msa0223930:intron | 25.0% |
| ! | GATTATGATAAAGCAGTAAA+TGG | - | chr2_1:73663316-73663335 | None:intergenic | 25.0% |
| !! | TTGACAATGAACAACATTTT+GGG | - | chr2_1:73663492-73663511 | None:intergenic | 25.0% |
| ! | ATTTATCTACAGGATAGTTA+AGG | - | chr2_1:73663625-73663644 | None:intergenic | 25.0% |
| !!! | AGTTCAGATCAGAATTTTTT+AGG | + | chr2_1:73663754-73663773 | Msa0223930:intron | 25.0% |
| !! | TGTGTATTCTTGTTATACTT+TGG | + | chr2_1:73663780-73663799 | Msa0223930:intron | 25.0% |
| ! | GTTTCAGAATTATTCTTTCA+TGG | + | chr2_1:73663831-73663850 | Msa0223930:intron | 25.0% |
| ! | TGCTTATATGAAAAATGCAT+TGG | + | chr2_1:73663865-73663884 | Msa0223930:intron | 25.0% |
| !!! | AAAGAATAATTAGGGGTATT+TGG | + | chr2_1:73663914-73663933 | Msa0223930:intron | 25.0% |
| ! | TCAAGAAGAAAAATTAACCA+TGG | - | chr2_1:73663985-73664004 | None:intergenic | 25.0% |
| ! | GTATTATGATATTCCTGATA+CGG | + | chr2_1:73664109-73664128 | Msa0223930:CDS | 25.0% |
| ! | AATTAAGAGTGGCATAATTA+AGG | - | chr2_1:73664174-73664193 | None:intergenic | 25.0% |
| !!! | TTGTTGTGGATTTTTTATTG+AGG | + | chr2_1:73664394-73664413 | Msa0223930:intron | 25.0% |
| !! | TTTTTATTGAGGTCAAAAGA+TGG | + | chr2_1:73664405-73664424 | Msa0223930:intron | 25.0% |
| ! | TTATGTACTTCAAATGCAAA+AGG | - | chr2_1:73664811-73664830 | None:intergenic | 25.0% |
| ! | AACACAGTAATAAATTGGAT+TGG | + | chr2_1:73664829-73664848 | Msa0223930:intron | 25.0% |
| ! | ACTCTTGAGATCTTTAATTA+TGG | + | chr2_1:73664876-73664895 | Msa0223930:intron | 25.0% |
| ! | GATAGGAAAACAACAAAAAA+TGG | - | chr2_1:73665049-73665068 | None:intergenic | 25.0% |
| ! | AGATAAAATCTCTAATGTAG+AGG | + | chr2_1:73665120-73665139 | Msa0223930:CDS | 25.0% |
| ! | ACATTAGTGAATGCAAAAAT+GGG | - | chr2_1:73665333-73665352 | None:intergenic | 25.0% |
| ! | AACATTAGTGAATGCAAAAA+TGG | - | chr2_1:73665334-73665353 | None:intergenic | 25.0% |
| ! | AAACTGATATATTGAAAGAG+AGG | - | chr2_1:73665597-73665616 | None:intergenic | 25.0% |
| !!! | GTTTTACTTCTCTAAAATTG+AGG | - | chr2_1:73665658-73665677 | None:intergenic | 25.0% |
| !!! | CATTTTATTTTATGTCACCA+TGG | - | chr2_1:73665773-73665792 | None:intergenic | 25.0% |
| !! | TTTCAGTAGCAGATTTTATT+TGG | - | chr2_1:73665855-73665874 | None:intergenic | 25.0% |
| !! | AATACTAGCATTTTACAGAA+TGG | - | chr2_1:73666408-73666427 | None:intergenic | 25.0% |
| ! | TTGCAAAATACAAGTAAGAA+TGG | - | chr2_1:73667081-73667100 | None:intergenic | 25.0% |
| ! | TGCAATGTAATATCTTGTAA+AGG | + | chr2_1:73667096-73667115 | Msa0223930:three_prime_UTR | 25.0% |
| GGAAAAGATGTTTGTGAATT+TGG | + | chr2_1:73661837-73661856 | Msa0223930:five_prime_UTR | 30.0% | |
| !!! | TGATTTGGTTTTGTTTGGTT+TGG | - | chr2_1:73661946-73661965 | None:intergenic | 30.0% |
| !!! | TGAAATGCCCATTTTTTTAG+GGG | - | chr2_1:73662144-73662163 | None:intergenic | 30.0% |
| !!! | CTGAAATGCCCATTTTTTTA+GGG | - | chr2_1:73662145-73662164 | None:intergenic | 30.0% |
| ACACAGATCAGATGAAAATT+GGG | - | chr2_1:73662325-73662344 | None:intergenic | 30.0% | |
| TACACAGATCAGATGAAAAT+TGG | - | chr2_1:73662326-73662345 | None:intergenic | 30.0% | |
| TCTGATCTGTGTAATCAAAT+TGG | + | chr2_1:73662333-73662352 | Msa0223930:intron | 30.0% | |
| TTTCTGATTGCTGTCAAAAT+TGG | + | chr2_1:73662484-73662503 | Msa0223930:intron | 30.0% | |
| !! | GATATGTTGTTTCTTTGTCA+AGG | + | chr2_1:73662603-73662622 | Msa0223930:intron | 30.0% |
| TTCTTTGTCAAGGTTACTAA+AGG | + | chr2_1:73662613-73662632 | Msa0223930:intron | 30.0% | |
| TCTTTGTCAAGGTTACTAAA+GGG | + | chr2_1:73662614-73662633 | Msa0223930:intron | 30.0% | |
| TAAAATCTTATTGACCCAGA+GGG | + | chr2_1:73662652-73662671 | Msa0223930:CDS | 30.0% | |
| TATAAGCCCGAATTATCTAT+CGG | - | chr2_1:73662683-73662702 | None:intergenic | 30.0% | |
| AAGAGTTATGAAGTTCACAA+AGG | + | chr2_1:73663010-73663029 | Msa0223930:CDS | 30.0% | |
| ! | GTTTTATGTGAACTTAGGTT+TGG | + | chr2_1:73663252-73663271 | Msa0223930:intron | 30.0% |
| !!! | CAATTGATATCTGCTTTTTC+AGG | + | chr2_1:73663345-73663364 | Msa0223930:intron | 30.0% |
| ! | ATATAGCTTCTTGTTGTGAT+GGG | - | chr2_1:73663417-73663436 | None:intergenic | 30.0% |
| ! | AATATAGCTTCTTGTTGTGA+TGG | - | chr2_1:73663418-73663437 | None:intergenic | 30.0% |
| ! | CTTGACAATGAACAACATTT+TGG | - | chr2_1:73663493-73663512 | None:intergenic | 30.0% |
| AATTCACGCAATTTATCTAC+AGG | - | chr2_1:73663635-73663654 | None:intergenic | 30.0% | |
| ATAAATTGCGTGAATTAGCT+TGG | + | chr2_1:73663639-73663658 | Msa0223930:CDS | 30.0% | |
| TCTAAACAAATTATTGAGGG+TGG | + | chr2_1:73663808-73663827 | Msa0223930:intron | 30.0% | |
| CTAAACAAATTATTGAGGGT+GGG | + | chr2_1:73663809-73663828 | Msa0223930:intron | 30.0% | |
| TTTAAAGATGAACTGACAAC+AGG | + | chr2_1:73664007-73664026 | Msa0223930:intron | 30.0% | |
| TTAAAGATGAACTGACAACA+GGG | + | chr2_1:73664008-73664027 | Msa0223930:intron | 30.0% | |
| ACCAACTAATTCAGATAGAA+GGG | + | chr2_1:73664037-73664056 | Msa0223930:CDS | 30.0% | |
| ATCCTGTCTTAAATAGTTAG+CGG | + | chr2_1:73664502-73664521 | Msa0223930:intron | 30.0% | |
| AGATAATCGGAACAAAATCT+AGG | - | chr2_1:73664557-73664576 | None:intergenic | 30.0% | |
| ! | AGCTTAATCCATTTCTAGAA+GGG | - | chr2_1:73664618-73664637 | None:intergenic | 30.0% |
| ! | AAGCTTAATCCATTTCTAGA+AGG | - | chr2_1:73664619-73664638 | None:intergenic | 30.0% |
| TTCCTATCAGAATACTTAGA+AGG | + | chr2_1:73665061-73665080 | Msa0223930:CDS | 30.0% | |
| TCCTATCAGAATACTTAGAA+GGG | + | chr2_1:73665062-73665081 | Msa0223930:CDS | 30.0% | |
| !! | TGTCTTTAAGTTGAAGGAAT+TGG | + | chr2_1:73665225-73665244 | Msa0223930:CDS | 30.0% |
| CATTAGTGAATGCAAAAATG+GGG | - | chr2_1:73665332-73665351 | None:intergenic | 30.0% | |
| GTATGACACTATGAAATGAT+AGG | + | chr2_1:73665458-73665477 | Msa0223930:intron | 30.0% | |
| ATCAGACATCACACTTAAAA+AGG | - | chr2_1:73666109-73666128 | None:intergenic | 30.0% | |
| AATATATACACAAGGAAGTC+AGG | - | chr2_1:73666204-73666223 | None:intergenic | 30.0% | |
| AACTGGCAAATATATACACA+AGG | - | chr2_1:73666212-73666231 | None:intergenic | 30.0% | |
| ! | ATTTGCCAGTTTTCTTCTTA+CGG | + | chr2_1:73666221-73666240 | Msa0223930:CDS | 30.0% |
| ATCTTGTAGTCAAGATGATA+AGG | + | chr2_1:73666297-73666316 | Msa0223930:intron | 30.0% | |
| ! | ATTAAAGTGTTCAACTCAGA+TGG | + | chr2_1:73666435-73666454 | Msa0223930:intron | 30.0% |
| ! | TTAAAGTGTTCAACTCAGAT+GGG | + | chr2_1:73666436-73666455 | Msa0223930:intron | 30.0% |
| ! | CTGAATTTTTATGCTGAACT+AGG | + | chr2_1:73666518-73666537 | Msa0223930:intron | 30.0% |
| TATAACCTAACATGCTAAAC+GGG | - | chr2_1:73666582-73666601 | None:intergenic | 30.0% | |
| CTATAACCTAACATGCTAAA+CGG | - | chr2_1:73666583-73666602 | None:intergenic | 30.0% | |
| AAATGCCAAAAAACGAACAA+GGG | - | chr2_1:73666638-73666657 | None:intergenic | 30.0% | |
| AAAATGCCAAAAAACGAACA+AGG | - | chr2_1:73666639-73666658 | None:intergenic | 30.0% | |
| !!! | TTATTTTTACTGTCTAGGAG+AGG | + | chr2_1:73666659-73666678 | Msa0223930:intron | 30.0% |
| TGTAATATCTTGTAAAGGAG+AGG | + | chr2_1:73667101-73667120 | Msa0223930:three_prime_UTR | 30.0% | |
| AAGGAGAGGTAAAAATAAAC+TGG | + | chr2_1:73667115-73667134 | Msa0223930:three_prime_UTR | 30.0% | |
| AACTGAAAATTAACTCCCAT+TGG | - | chr2_1:73667194-73667213 | None:intergenic | 30.0% | |
| ! | TCAGTTATTGATGATTTGGA+TGG | + | chr2_1:73667208-73667227 | Msa0223930:three_prime_UTR | 30.0% |
| AAGAAAAGTGAAGTTTGGAG+TGG | + | chr2_1:73661805-73661824 | Msa0223930:five_prime_UTR | 35.0% | |
| !!! | TGGTTTTGTTTGGTTTGGTT+TGG | - | chr2_1:73661941-73661960 | None:intergenic | 35.0% |
| ! | GTTGTTCATGGTTGATATGT+TGG | - | chr2_1:73661973-73661992 | None:intergenic | 35.0% |
| TTTGGTTGAATCGAGAATCA+AGG | - | chr2_1:73662037-73662056 | None:intergenic | 35.0% | |
| AAACCCTCAGAAATGTTCAA+GGG | + | chr2_1:73662054-73662073 | Msa0223930:CDS | 35.0% | |
| ATACCCTTGAACATTTCTGA+GGG | - | chr2_1:73662060-73662079 | None:intergenic | 35.0% | |
| !!! | CCTGAAATGCCCATTTTTTT+AGG | - | chr2_1:73662146-73662165 | None:intergenic | 35.0% |
| CCTAAAAAAATGGGCATTTC+AGG | + | chr2_1:73662143-73662162 | Msa0223930:intron | 35.0% | |
| ACAGATCAGATGAAAATTGG+GGG | - | chr2_1:73662323-73662342 | None:intergenic | 35.0% | |
| CACAGATCAGATGAAAATTG+GGG | - | chr2_1:73662324-73662343 | None:intergenic | 35.0% | |
| ! | TGGGTCAATAAGATTTTACC+AGG | - | chr2_1:73662650-73662669 | None:intergenic | 35.0% |
| GTAAAATCTTATTGACCCAG+AGG | + | chr2_1:73662651-73662670 | Msa0223930:CDS | 35.0% | |
| GGTAGATCCGATAGATAATT+CGG | + | chr2_1:73662673-73662692 | Msa0223930:CDS | 35.0% | |
| GTAGATCCGATAGATAATTC+GGG | + | chr2_1:73662674-73662693 | Msa0223930:CDS | 35.0% | |
| TATACTCACCAACTTACCAA+AGG | + | chr2_1:73662699-73662718 | Msa0223930:CDS | 35.0% | |
| AGTTCCTCATATAGTGATAC+TGG | + | chr2_1:73662722-73662741 | Msa0223930:CDS | 35.0% | |
| ATACAGGAAGAAGTTCACAA+TGG | + | chr2_1:73662870-73662889 | Msa0223930:intron | 35.0% | |
| ! | TCTGGAACCATGGTTATATT+AGG | + | chr2_1:73663038-73663057 | Msa0223930:CDS | 35.0% |
| GATACTTTCATAACTGGAAG+AGG | - | chr2_1:73663138-73663157 | None:intergenic | 35.0% | |
| GCAACGTGTTAGACTTATTA+TGG | - | chr2_1:73663183-73663202 | None:intergenic | 35.0% | |
| !! | GTCGAGTTTTATGTGAACTT+AGG | + | chr2_1:73663247-73663266 | Msa0223930:intron | 35.0% |
| ! | GTCTTTCATTCCCTTGATTT+TGG | + | chr2_1:73663466-73663485 | Msa0223930:intron | 35.0% |
| ! | ACATTTTGGGCCAAAATCAA+GGG | - | chr2_1:73663479-73663498 | None:intergenic | 35.0% |
| ! | AACATTTTGGGCCAAAATCA+AGG | - | chr2_1:73663480-73663499 | None:intergenic | 35.0% |
| CACCAACTAATTCAGATAGA+AGG | + | chr2_1:73664036-73664055 | Msa0223930:CDS | 35.0% | |
| TCCCTTCTATCTGAATTAGT+TGG | - | chr2_1:73664041-73664060 | None:intergenic | 35.0% | |
| AACTAATTCAGATAGAAGGG+AGG | + | chr2_1:73664040-73664059 | Msa0223930:CDS | 35.0% | |
| ACTAATTCAGATAGAAGGGA+GGG | + | chr2_1:73664041-73664060 | Msa0223930:CDS | 35.0% | |
| TACAGTTCTTGGACAATCAA+CGG | - | chr2_1:73664253-73664272 | None:intergenic | 35.0% | |
| TAATATAAGGCCTGACAAAC+AGG | - | chr2_1:73664356-73664375 | None:intergenic | 35.0% | |
| CATTCTAGTGTTCTTTGTTG+TGG | + | chr2_1:73664380-73664399 | Msa0223930:intron | 35.0% | |
| !!! | GGATTTTAGTTCGAGTAAGA+TGG | + | chr2_1:73664426-73664445 | Msa0223930:intron | 35.0% |
| ATGGTTAGACAGGGTTTATA+AGG | + | chr2_1:73664445-73664464 | Msa0223930:intron | 35.0% | |
| ! | ATCCGCTAACTATTTAAGAC+AGG | - | chr2_1:73664507-73664526 | None:intergenic | 35.0% |
| ! | TGTAGATTCCCTTCTAGAAA+TGG | + | chr2_1:73664607-73664626 | Msa0223930:intron | 35.0% |
| ! | ATACTTCTGTTTCTTCCTAG+CGG | + | chr2_1:73664712-73664731 | Msa0223930:intron | 35.0% |
| ! | TAGTTTCTTTTCCTACGTCA+TGG | - | chr2_1:73664748-73664767 | None:intergenic | 35.0% |
| GCAAAAAATAGTCGACAAGA+AGG | - | chr2_1:73664907-73664926 | None:intergenic | 35.0% | |
| TCCCTTCTAAGTATTCTGAT+AGG | - | chr2_1:73665066-73665085 | None:intergenic | 35.0% | |
| TGCTTGTCAAAATTGCTTGA+TGG | + | chr2_1:73665157-73665176 | Msa0223930:CDS | 35.0% | |
| !! | AAGGCTTGTCTTTAAGTTGA+AGG | + | chr2_1:73665219-73665238 | Msa0223930:CDS | 35.0% |
| !! | TTAAGTTGAAGGAATTGGTC+AGG | + | chr2_1:73665230-73665249 | Msa0223930:CDS | 35.0% |
| !! | TTGATGGTAACCTTTTTCTC+TGG | + | chr2_1:73665257-73665276 | Msa0223930:intron | 35.0% |
| CACTAAACCGTATAGACATA+CGG | - | chr2_1:73665385-73665404 | None:intergenic | 35.0% | |
| GTATGTCTATACGGTTTAGT+GGG | + | chr2_1:73665384-73665403 | Msa0223930:intron | 35.0% | |
| ! | GTCATACTCACATTTTCTCT+AGG | - | chr2_1:73665445-73665464 | None:intergenic | 35.0% |
| AAATGATAGGTTGTCGTACA+AGG | + | chr2_1:73665471-73665490 | Msa0223930:intron | 35.0% | |
| AATGATAGGTTGTCGTACAA+GGG | + | chr2_1:73665472-73665491 | Msa0223930:intron | 35.0% | |
| CCAAATCCAAATGCAAAAGA+GGG | - | chr2_1:73665526-73665545 | None:intergenic | 35.0% | |
| TCCAAATCCAAATGCAAAAG+AGG | - | chr2_1:73665527-73665546 | None:intergenic | 35.0% | |
| ! | CTAAAATTGAGGGCATGTAA+TGG | - | chr2_1:73665647-73665666 | None:intergenic | 35.0% |
| ACCATTAGATACTGCTTTCA+TGG | + | chr2_1:73665743-73665762 | Msa0223930:intron | 35.0% | |
| ACCATGAAAGCAGTATCTAA+TGG | - | chr2_1:73665747-73665766 | None:intergenic | 35.0% | |
| TGGACTGAACAAATTTGACA+CGG | + | chr2_1:73666075-73666094 | Msa0223930:intron | 35.0% | |
| GTAGTCAAGATGATAAGGAA+TGG | + | chr2_1:73666302-73666321 | Msa0223930:intron | 35.0% | |
| TGGTAGATTTCAGTAAACGA+CGG | + | chr2_1:73666356-73666375 | Msa0223930:intron | 35.0% | |
| ! | GTCTCACATACCCTTTTTAT+TGG | + | chr2_1:73666555-73666574 | Msa0223930:intron | 35.0% |
| CTAAACGGGACCAATAAAAA+GGG | - | chr2_1:73666568-73666587 | None:intergenic | 35.0% | |
| TAAATACAGGAATTCAGCAG+AGG | - | chr2_1:73666956-73666975 | None:intergenic | 35.0% | |
| GAAAAAAGTAGGATGGAATG+AGG | - | chr2_1:73667001-73667020 | None:intergenic | 35.0% | |
| TAAAGGGGAAAAAAGTAGGA+TGG | - | chr2_1:73667008-73667027 | None:intergenic | 35.0% | |
| ACACTAAAGGGGAAAAAAGT+AGG | - | chr2_1:73667012-73667031 | None:intergenic | 35.0% | |
| TTGCAATGTCAACAACCAAT+GGG | + | chr2_1:73667176-73667195 | Msa0223930:three_prime_UTR | 35.0% | |
| ! | GTCGTTGTTGTTGTTGTTCA+TGG | - | chr2_1:73661985-73662004 | None:intergenic | 40.0% |
| GACAAAGACACTAGTACCAT+AGG | + | chr2_1:73662008-73662027 | Msa0223930:CDS | 40.0% | |
| TCGAGAATCAAGGATTCCTA+TGG | - | chr2_1:73662027-73662046 | None:intergenic | 40.0% | |
| ! | CTTGAACATTTCTGAGGGTT+TGG | - | chr2_1:73662055-73662074 | None:intergenic | 40.0% |
| CAAACCCTCAGAAATGTTCA+AGG | + | chr2_1:73662053-73662072 | Msa0223930:CDS | 40.0% | |
| CATACCCTTGAACATTTCTG+AGG | - | chr2_1:73662061-73662080 | None:intergenic | 40.0% | |
| CACTATATGAGGAACTCCTT+TGG | - | chr2_1:73662718-73662737 | None:intergenic | 40.0% | |
| TGTGCCAGTATCACTATATG+AGG | - | chr2_1:73662729-73662748 | None:intergenic | 40.0% | |
| TCGTGCAACTGAAACAATAG+AGG | + | chr2_1:73662754-73662773 | Msa0223930:CDS | 40.0% | |
| GTGACTTCTGCTCTTAATAC+AGG | + | chr2_1:73662854-73662873 | Msa0223930:intron | 40.0% | |
| TTCAGTTGGGTTCTCTACAT+GGG | - | chr2_1:73662946-73662965 | None:intergenic | 40.0% | |
| ATTTCCGGACTTCTTCAGTT+GGG | - | chr2_1:73662959-73662978 | None:intergenic | 40.0% | |
| AAGTTCACAAAGGTTCTCTC+TGG | + | chr2_1:73663020-73663039 | Msa0223930:CDS | 40.0% | |
| ATAACTGGAAGAGGTCACTT+AGG | - | chr2_1:73663129-73663148 | None:intergenic | 40.0% | |
| ACTGTAGGACGCATATAATC+TGG | - | chr2_1:73663674-73663693 | None:intergenic | 40.0% | |
| ATTATATGCGTCCTACAGTG+TGG | + | chr2_1:73663675-73663694 | Msa0223930:CDS | 40.0% | |
| ! | GTCAACGTCATGATTTTCCA+TGG | + | chr2_1:73663965-73663984 | Msa0223930:intron | 40.0% |
| GTGGCATAATTAAGGATACC+TGG | - | chr2_1:73664166-73664185 | None:intergenic | 40.0% | |
| ATTTCTGAACTTGTGGTTGC+TGG | - | chr2_1:73664293-73664312 | None:intergenic | 40.0% | |
| ACCACAAGTTCAGAAATCAC+TGG | + | chr2_1:73664296-73664315 | Msa0223930:CDS | 40.0% | |
| TCCAGTGATTTCTGAACTTG+TGG | - | chr2_1:73664300-73664319 | None:intergenic | 40.0% | |
| TTACAGATGACCTGTTTGTC+AGG | + | chr2_1:73664343-73664362 | Msa0223930:intron | 40.0% | |
| TTCGAGTAAGATGGTTAGAC+AGG | + | chr2_1:73664435-73664454 | Msa0223930:intron | 40.0% | |
| TCGAGTAAGATGGTTAGACA+GGG | + | chr2_1:73664436-73664455 | Msa0223930:intron | 40.0% | |
| GTTAGACAGGGTTTATAAGG+CGG | + | chr2_1:73664448-73664467 | Msa0223930:intron | 40.0% | |
| TTAGACAGGGTTTATAAGGC+GGG | + | chr2_1:73664449-73664468 | Msa0223930:intron | 40.0% | |
| ! | TAGAAGCATGTAAGACAGTG+TGG | + | chr2_1:73664639-73664658 | Msa0223930:intron | 40.0% |
| GTTGCAATCTATGCTTGAGA+TGG | + | chr2_1:73664851-73664870 | Msa0223930:intron | 40.0% | |
| TGATAACCTCATCTTCTTCC+AGG | + | chr2_1:73664969-73664988 | Msa0223930:intron | 40.0% | |
| GATAACCTCATCTTCTTCCA+GGG | + | chr2_1:73664970-73664989 | Msa0223930:intron | 40.0% | |
| ! | TAGAAGGGAGCATAGATAAC+TGG | + | chr2_1:73665077-73665096 | Msa0223930:CDS | 40.0% |
| CATTACACATTTGCTCAACC+AGG | + | chr2_1:73665190-73665209 | Msa0223930:CDS | 40.0% | |
| TTGCTCAACCAGGAATTCAA+AGG | + | chr2_1:73665200-73665219 | Msa0223930:CDS | 40.0% | |
| AAGACAAGCCTTTGAATTCC+TGG | - | chr2_1:73665211-73665230 | None:intergenic | 40.0% | |
| AAACAACAGGCCAGAGAAAA+AGG | - | chr2_1:73665270-73665289 | None:intergenic | 40.0% | |
| TACGGTGTGGTTGTTGAAAT+GGG | - | chr2_1:73665367-73665386 | None:intergenic | 40.0% | |
| ATACGGTGTGGTTGTTGAAA+TGG | - | chr2_1:73665368-73665387 | None:intergenic | 40.0% | |
| AACCACACCGTATGTCTATA+CGG | + | chr2_1:73665375-73665394 | Msa0223930:intron | 40.0% | |
| CGTATGTCTATACGGTTTAG+TGG | + | chr2_1:73665383-73665402 | Msa0223930:intron | 40.0% | |
| !!! | TCGTACAAGGGTGTCTATTT+TGG | + | chr2_1:73665484-73665503 | Msa0223930:intron | 40.0% |
| !!! | CGTACAAGGGTGTCTATTTT+GGG | + | chr2_1:73665485-73665504 | Msa0223930:intron | 40.0% |
| ! | TAACAGCCCTCTTTTGCATT+TGG | + | chr2_1:73665517-73665536 | Msa0223930:intron | 40.0% |
| ! | CCCTCTTTTGCATTTGGATT+TGG | + | chr2_1:73665523-73665542 | Msa0223930:intron | 40.0% |
| ! | ACTGCTTTCATGGTTTTCCA+TGG | + | chr2_1:73665753-73665772 | Msa0223930:intron | 40.0% |
| ATATGGCTTGAAACAGGATC+TGG | - | chr2_1:73665890-73665909 | None:intergenic | 40.0% | |
| AGATCCTGTTTCAAGCCATA+TGG | + | chr2_1:73665889-73665908 | Msa0223930:intron | 40.0% | |
| TTCTCCATATGGCTTGAAAC+AGG | - | chr2_1:73665896-73665915 | None:intergenic | 40.0% | |
| TTCAAGCCATATGGAGAATC+AGG | + | chr2_1:73665898-73665917 | Msa0223930:CDS | 40.0% | |
| TCAAGCCATATGGAGAATCA+GGG | + | chr2_1:73665899-73665918 | Msa0223930:CDS | 40.0% | |
| ! | TTCTTCAATTTGCTTTCCGC+TGG | + | chr2_1:73665930-73665949 | Msa0223930:CDS | 40.0% |
| TTAGAAGACAGTTGAACCAG+CGG | - | chr2_1:73665949-73665968 | None:intergenic | 40.0% | |
| AAAAATCAGTGCAAACCTCG+CGG | - | chr2_1:73665973-73665992 | None:intergenic | 40.0% | |
| ATACACAAGGAAGTCAGGTA+AGG | - | chr2_1:73666199-73666218 | None:intergenic | 40.0% | |
| ACTCACCGTAAGAAGAAAAC+TGG | - | chr2_1:73666229-73666248 | None:intergenic | 40.0% | |
| GTTTACTGAAATCTACCAGC+CGG | - | chr2_1:73666354-73666373 | None:intergenic | 40.0% | |
| ! | AAAAAGGGTATGTGAGACTG+TGG | - | chr2_1:73666553-73666572 | None:intergenic | 40.0% |
| GCTAAACGGGACCAATAAAA+AGG | - | chr2_1:73666569-73666588 | None:intergenic | 40.0% | |
| CCAAAAAACGAACAAGGGTA+AGG | - | chr2_1:73666633-73666652 | None:intergenic | 40.0% | |
| !!! | CCTTACCCTTGTTCGTTTTT+TGG | + | chr2_1:73666630-73666649 | Msa0223930:intron | 40.0% |
| TACTCTCTCGTGCATTTATG+TGG | + | chr2_1:73666885-73666904 | Msa0223930:CDS | 40.0% | |
| ATTTAGGCAGCTAAATGGCT+AGG | - | chr2_1:73666932-73666951 | None:intergenic | 40.0% | |
| !!! | CTTTTTTCCCCTTTAGTGTG+TGG | + | chr2_1:73667013-73667032 | Msa0223930:three_prime_UTR | 40.0% |
| AACAAGCACCACACACTAAA+GGG | - | chr2_1:73667024-73667043 | None:intergenic | 40.0% | |
| AAACAAGCACCACACACTAA+AGG | - | chr2_1:73667025-73667044 | None:intergenic | 40.0% | |
| CTTGCAATGTCAACAACCAA+TGG | + | chr2_1:73667175-73667194 | Msa0223930:three_prime_UTR | 40.0% | |
| ! | GTGAAGTTTGGAGTGGTTGA+AGG | + | chr2_1:73661812-73661831 | Msa0223930:five_prime_UTR | 45.0% |
| ! | AGTTTGGAGTGGTTGAAGGA+AGG | + | chr2_1:73661816-73661835 | Msa0223930:five_prime_UTR | 45.0% |
| ATCTATCGGATCTACCCTCT+GGG | - | chr2_1:73662669-73662688 | None:intergenic | 45.0% | |
| TATCTATCGGATCTACCCTC+TGG | - | chr2_1:73662670-73662689 | None:intergenic | 45.0% | |
| GAGGAACTCCTTTGGTAAGT+TGG | - | chr2_1:73662710-73662729 | None:intergenic | 45.0% | |
| CACAATGGAAGCAAGCCATT+TGG | + | chr2_1:73662885-73662904 | Msa0223930:CDS | 45.0% | |
| !! | CCATCGTTGGTAGTTCCAAA+TGG | - | chr2_1:73662903-73662922 | None:intergenic | 45.0% |
| ! | CCATTTGGAACTACCAACGA+TGG | + | chr2_1:73662900-73662919 | Msa0223930:CDS | 45.0% |
| CTTCAGTTGGGTTCTCTACA+TGG | - | chr2_1:73662947-73662966 | None:intergenic | 45.0% | |
| AGAACCCAACTGAAGAAGTC+CGG | + | chr2_1:73662952-73662971 | Msa0223930:CDS | 45.0% | |
| GATTTCCGGACTTCTTCAGT+TGG | - | chr2_1:73662960-73662979 | None:intergenic | 45.0% | |
| AGAAGTCCGGAAATCTTCCA+TGG | + | chr2_1:73662965-73662984 | Msa0223930:CDS | 45.0% | |
| GAAGTCCGGAAATCTTCCAT+GGG | + | chr2_1:73662966-73662985 | Msa0223930:CDS | 45.0% | |
| TACCACCCATGGAAGATTTC+CGG | - | chr2_1:73662974-73662993 | None:intergenic | 45.0% | |
| !! | AAAGGTTCTCTCTGGAACCA+TGG | + | chr2_1:73663028-73663047 | Msa0223930:CDS | 45.0% |
| ! | TTGCGTGAATTAGCTTGGAG+TGG | + | chr2_1:73663644-73663663 | Msa0223930:CDS | 45.0% |
| AAGAGAAGTCTCCACACTGT+AGG | - | chr2_1:73663689-73663708 | None:intergenic | 45.0% | |
| TACAGTGTGGAGACTTCTCT+TGG | + | chr2_1:73663688-73663707 | Msa0223930:CDS | 45.0% | |
| !!! | AGGGAGTTTTGAGAAGGAAG+CGG | + | chr2_1:73664060-73664079 | Msa0223930:CDS | 45.0% |
| GCAACATCAGGTACAGTTCT+TGG | - | chr2_1:73664264-73664283 | None:intergenic | 45.0% | |
| TGCTGGAAGAATGCAACATC+AGG | - | chr2_1:73664276-73664295 | None:intergenic | 45.0% | |
| TGGAGCGTATTCTTTACGCA+TGG | + | chr2_1:73664316-73664335 | Msa0223930:CDS | 45.0% | |
| TCCAGCAAGTGGATATGTTC+AGG | + | chr2_1:73665003-73665022 | Msa0223930:CDS | 45.0% | |
| CCAGCAAGTGGATATGTTCA+GGG | + | chr2_1:73665004-73665023 | Msa0223930:CDS | 45.0% | |
| CAGCAAGTGGATATGTTCAG+GGG | + | chr2_1:73665005-73665024 | Msa0223930:CDS | 45.0% | |
| ATGTAGAGGCTGACTGCTAT+TGG | + | chr2_1:73665134-73665153 | Msa0223930:CDS | 45.0% | |
| AGTTGAAGGAATTGGTCAGG+AGG | + | chr2_1:73665233-73665252 | Msa0223930:CDS | 45.0% | |
| GAATTGGTCAGGAGGATTGA+TGG | + | chr2_1:73665241-73665260 | Msa0223930:CDS | 45.0% | |
| AACCGTATAGACATACGGTG+TGG | - | chr2_1:73665380-73665399 | None:intergenic | 45.0% | |
| !! | GAGAGCATTGATGAAGACTG+AGG | - | chr2_1:73665701-73665720 | None:intergenic | 45.0% |
| CAGCTAGATATGTGTCCCAA+AGG | - | chr2_1:73666167-73666186 | None:intergenic | 45.0% | |
| TGGGACACATATCTAGCTGA+AGG | + | chr2_1:73666168-73666187 | Msa0223930:CDS | 45.0% | |
| AGTGTTCAACTCAGATGGGA+TGG | + | chr2_1:73666440-73666459 | Msa0223930:intron | 45.0% | |
| TTGGTCCCGTTTAGCATGTT+AGG | + | chr2_1:73666574-73666593 | Msa0223930:intron | 45.0% | |
| !! | TCTGAGTTGGAAGGTGTTGA+AGG | - | chr2_1:73666838-73666857 | None:intergenic | 45.0% |
| AACACCTTCCAACTCAGAAC+TGG | + | chr2_1:73666840-73666859 | Msa0223930:CDS | 45.0% | |
| !! | TGATCAGTCCAGTTCTGAGT+TGG | - | chr2_1:73666851-73666870 | None:intergenic | 45.0% |
| AACTCAGAACTGGACTGATC+AGG | + | chr2_1:73666850-73666869 | Msa0223930:CDS | 45.0% | |
| ! | GAGGCATTTAGGCAGCTAAA+TGG | - | chr2_1:73666937-73666956 | None:intergenic | 45.0% |
| !! | GGAATTCAGCAGAGGCATTT+AGG | - | chr2_1:73666948-73666967 | None:intergenic | 45.0% |
| ACAAGCACCACACACTAAAG+GGG | - | chr2_1:73667023-73667042 | None:intergenic | 45.0% | |
| CTAAAGGGTCGTAGCATTCC+TGG | + | chr2_1:73662629-73662648 | Msa0223930:CDS | 50.0% | |
| AGTTGGGTTCTCTACATGGG+AGG | - | chr2_1:73662943-73662962 | None:intergenic | 50.0% | |
| GGAAATCTTCCATGGGTGGT+AGG | + | chr2_1:73662973-73662992 | Msa0223930:CDS | 50.0% | |
| ATCAGTAGTCCTACCACCCA+TGG | - | chr2_1:73662985-73663004 | None:intergenic | 50.0% | |
| !!! | GAAGGGAGGGAGTTTTGAGA+AGG | + | chr2_1:73664054-73664073 | Msa0223930:CDS | 50.0% |
| ! | GCAGTTTAGAGCCATGACGT+AGG | + | chr2_1:73664734-73664753 | Msa0223930:intron | 50.0% |
| AATGGCCCTGGAAGAAGATG+AGG | - | chr2_1:73664978-73664997 | None:intergenic | 50.0% | |
| CATCTTCTTCCAGGGCCATT+CGG | + | chr2_1:73664978-73664997 | Msa0223930:intron | 50.0% | |
| CCCTGAACATATCCACTTGC+TGG | - | chr2_1:73665007-73665026 | None:intergenic | 50.0% | |
| CCAGTCCCTGATTCTCCATA+TGG | - | chr2_1:73665907-73665926 | None:intergenic | 50.0% | |
| CCATATGGAGAATCAGGGAC+TGG | + | chr2_1:73665904-73665923 | Msa0223930:CDS | 50.0% | |
| CAACTGTCTTCTAATCCGCG+AGG | + | chr2_1:73665955-73665974 | Msa0223930:CDS | 50.0% | |
| AGGCGTGTGACAAGATGGAA+GGG | - | chr2_1:73666147-73666166 | None:intergenic | 50.0% | |
| AAGGCGTGTGACAAGATGGA+AGG | - | chr2_1:73666148-73666167 | None:intergenic | 50.0% | |
| TCCATCTTGTCACACGCCTT+TGG | + | chr2_1:73666148-73666167 | Msa0223930:CDS | 50.0% | |
| CCATCTTGTCACACGCCTTT+GGG | + | chr2_1:73666149-73666168 | Msa0223930:CDS | 50.0% | |
| TTGTCAATATGTGCCCCCTC+CGG | + | chr2_1:73666332-73666351 | Msa0223930:intron | 50.0% | |
| ACTGAAATCTACCAGCCGGA+GGG | - | chr2_1:73666350-73666369 | None:intergenic | 50.0% | |
| TACTGAAATCTACCAGCCGG+AGG | - | chr2_1:73666351-73666370 | None:intergenic | 50.0% | |
| TCAGATGGGATGGATGCATG+TGG | + | chr2_1:73666450-73666469 | Msa0223930:intron | 50.0% | |
| !! | CAGTCCAGTTCTGAGTTGGA+AGG | - | chr2_1:73666847-73666866 | None:intergenic | 50.0% |
| GACTGATCAGGAACTCGAGA+TGG | + | chr2_1:73666862-73666881 | Msa0223930:CDS | 50.0% | |
| GTCCGGAAATCTTCCATGGG+TGG | + | chr2_1:73662969-73662988 | Msa0223930:CDS | 55.0% | |
| TCGTCTGAGCGTTCCGTATC+AGG | - | chr2_1:73664125-73664144 | None:intergenic | 55.0% | |
| TGAGATCAGCATGCTTCGCC+AGG | + | chr2_1:73664145-73664164 | Msa0223930:CDS | 55.0% | |
| !! | CATGGCTCTAAACTGCCGCT+AGG | - | chr2_1:73664730-73664749 | None:intergenic | 55.0% |
| ! | TCCACTTGCTGGATGCCGAA+TGG | - | chr2_1:73664996-73665015 | None:intergenic | 55.0% |
| ! | CCCAAAGGCGTGTGACAAGA+TGG | - | chr2_1:73666152-73666171 | None:intergenic | 55.0% |
| TGAAATCTACCAGCCGGAGG+GGG | - | chr2_1:73666348-73666367 | None:intergenic | 55.0% | |
| CTGAAATCTACCAGCCGGAG+GGG | - | chr2_1:73666349-73666368 | None:intergenic | 55.0% | |
| GCCATTCGGCATCCAGCAAG+TGG | + | chr2_1:73664992-73665011 | Msa0223930:CDS | 60.0% | |
| TGCTGGATGCCGAATGGCCC+TGG | - | chr2_1:73664990-73665009 | None:intergenic | 65.0% | |
| CAATATGTGCCCCCTCCGGC+TGG | + | chr2_1:73666336-73666355 | Msa0223930:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73661770 | 73667282 | 73661770 | ID=Msa0223930;Name=Msa0223930 |
| chr2_1 | mRNA | 73661770 | 73667282 | 73661770 | ID=Msa0223930-mRNA-1;Parent=Msa0223930;Name=Msa0223930-mRNA-1;_AED=0.12;_eAED=0.12;_QI=214|1|1|1|1|1|10|333|449 |
| chr2_1 | exon | 73661770 | 73662075 | 73661770 | ID=Msa0223930-mRNA-1:exon:21650;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73662625 | 73662775 | 73662625 | ID=Msa0223930-mRNA-1:exon:21651;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73662876 | 73663059 | 73662876 | ID=Msa0223930-mRNA-1:exon:21652;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73663639 | 73663709 | 73663639 | ID=Msa0223930-mRNA-1:exon:21653;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73664029 | 73664166 | 73664029 | ID=Msa0223930-mRNA-1:exon:21654;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73664246 | 73664337 | 73664246 | ID=Msa0223930-mRNA-1:exon:21655;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73664991 | 73665262 | 73664991 | ID=Msa0223930-mRNA-1:exon:21656;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73665891 | 73665976 | 73665891 | ID=Msa0223930-mRNA-1:exon:21657;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73666141 | 73666242 | 73666141 | ID=Msa0223930-mRNA-1:exon:21658;Parent=Msa0223930-mRNA-1 |
| chr2_1 | exon | 73666788 | 73667282 | 73666788 | ID=Msa0223930-mRNA-1:exon:21659;Parent=Msa0223930-mRNA-1 |
| chr2_1 | five_prime_UTR | 73661770 | 73661983 | 73661770 | ID=Msa0223930-mRNA-1:five_prime_utr;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73661984 | 73662075 | 73661984 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73662625 | 73662775 | 73662625 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73662876 | 73663059 | 73662876 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73663639 | 73663709 | 73663639 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73664029 | 73664166 | 73664029 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73664246 | 73664337 | 73664246 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73664991 | 73665262 | 73664991 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73665891 | 73665976 | 73665891 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73666141 | 73666242 | 73666141 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | CDS | 73666788 | 73666949 | 73666788 | ID=Msa0223930-mRNA-1:cds;Parent=Msa0223930-mRNA-1 |
| chr2_1 | three_prime_UTR | 73666950 | 73667282 | 73666950 | ID=Msa0223930-mRNA-1:three_prime_utr;Parent=Msa0223930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
