Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340590 | XP_003597541.1 | 97.092 | 447 | 13 | 0 | 3 | 449 | 2 | 448 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340590 | sp|Q9NU19|TB22B_HUMAN | 51.852 | 324 | 152 | 2 | 124 | 446 | 182 | 502 | 5.93e-117 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223930 | Msa0340590 | 0.841334 | 5.062114e-58 | -8.615850e-47 |
| Msa0265170 | Msa0340590 | 0.860146 | 2.530982e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340590 | MtrunA17_Chr2g0329691 | 97.092 | 447 | 13 | 0 | 3 | 449 | 2 | 448 | 0.0 | 912 |
| Msa0340590 | MtrunA17_Chr4g0033831 | 79.680 | 438 | 87 | 1 | 14 | 449 | 18 | 455 | 0.0 | 727 |
| Msa0340590 | MtrunA17_Chr3g0121451 | 26.608 | 342 | 182 | 9 | 135 | 420 | 88 | 416 | 3.98e-24 | 103 |
| Msa0340590 | MtrunA17_Chr8g0378291 | 26.608 | 342 | 182 | 8 | 135 | 420 | 99 | 427 | 4.28e-21 | 95.1 |
| Msa0340590 | MtrunA17_Chr4g0063771 | 30.172 | 232 | 135 | 6 | 212 | 433 | 80 | 294 | 2.57e-20 | 91.3 |
| Msa0340590 | MtrunA17_Chr6g0456341 | 25.449 | 334 | 174 | 11 | 108 | 417 | 31 | 313 | 7.51e-18 | 84.7 |
| Msa0340590 | MtrunA17_Chr5g0448071 | 25.523 | 239 | 134 | 5 | 145 | 379 | 106 | 304 | 7.98e-16 | 79.0 |
| Msa0340590 | MtrunA17_Chr1g0183581 | 26.103 | 272 | 142 | 11 | 137 | 373 | 60 | 307 | 1.06e-15 | 79.0 |
| Msa0340590 | MtrunA17_Chr4g0064141 | 24.315 | 292 | 182 | 10 | 137 | 416 | 350 | 614 | 3.11e-15 | 78.2 |
| Msa0340590 | MtrunA17_Chr2g0329651 | 26.818 | 220 | 117 | 6 | 203 | 417 | 361 | 541 | 1.64e-14 | 75.9 |
| Msa0340590 | MtrunA17_Chr1g0181831 | 25.000 | 264 | 149 | 10 | 148 | 399 | 298 | 524 | 6.33e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340590 | AT2G30710.1 | 76.334 | 431 | 99 | 2 | 19 | 449 | 13 | 440 | 0.0 | 694 |
| Msa0340590 | AT1G04830.1 | 26.835 | 436 | 236 | 12 | 53 | 420 | 11 | 431 | 1.24e-28 | 117 |
| Msa0340590 | AT1G04830.2 | 26.835 | 436 | 236 | 12 | 53 | 420 | 11 | 431 | 1.72e-28 | 117 |
| Msa0340590 | AT4G13730.3 | 25.146 | 342 | 198 | 6 | 124 | 420 | 96 | 424 | 1.25e-22 | 100 |
| Msa0340590 | AT4G13730.1 | 24.646 | 353 | 197 | 7 | 124 | 420 | 96 | 435 | 2.22e-20 | 93.6 |
| Msa0340590 | AT3G02460.1 | 26.277 | 274 | 147 | 8 | 152 | 417 | 88 | 314 | 4.44e-18 | 85.9 |
| Msa0340590 | AT3G02460.3 | 26.277 | 274 | 147 | 8 | 152 | 417 | 88 | 314 | 6.23e-18 | 85.1 |
| Msa0340590 | AT5G15930.1 | 25.182 | 274 | 152 | 7 | 151 | 417 | 84 | 311 | 1.35e-17 | 84.3 |
| Msa0340590 | AT1G04830.3 | 25.187 | 401 | 244 | 11 | 53 | 420 | 11 | 388 | 1.43e-17 | 84.7 |
| Msa0340590 | AT4G13730.2 | 24.545 | 330 | 176 | 8 | 124 | 397 | 96 | 408 | 1.64e-17 | 84.7 |
| Msa0340590 | AT3G07890.1 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.03e-16 | 82.0 |
| Msa0340590 | AT3G07890.4 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.03e-16 | 82.0 |
| Msa0340590 | AT3G07890.5 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.03e-16 | 82.0 |
| Msa0340590 | AT3G07890.2 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.03e-16 | 82.0 |
| Msa0340590 | AT3G07890.3 | 26.667 | 240 | 130 | 7 | 145 | 379 | 109 | 307 | 1.03e-16 | 82.0 |
| Msa0340590 | AT2G43490.5 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.21e-15 | 79.7 |
| Msa0340590 | AT2G43490.4 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.25e-15 | 79.7 |
| Msa0340590 | AT2G43490.1 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.25e-15 | 79.7 |
| Msa0340590 | AT2G43490.7 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.25e-15 | 79.7 |
| Msa0340590 | AT2G43490.3 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.25e-15 | 79.7 |
| Msa0340590 | AT2G43490.2 | 30.178 | 169 | 94 | 3 | 210 | 377 | 359 | 504 | 1.25e-15 | 79.7 |
| Msa0340590 | AT2G43490.6 | 30.178 | 169 | 94 | 3 | 210 | 377 | 355 | 500 | 1.26e-15 | 79.7 |
| Msa0340590 | AT2G43490.8 | 30.178 | 169 | 94 | 3 | 210 | 377 | 355 | 500 | 1.26e-15 | 79.7 |
| Msa0340590 | AT3G02460.4 | 25.957 | 235 | 124 | 6 | 152 | 379 | 88 | 279 | 1.89e-15 | 77.4 |
| Msa0340590 | AT5G52580.1 | 24.930 | 357 | 219 | 13 | 80 | 416 | 295 | 622 | 3.56e-15 | 78.6 |
| Msa0340590 | AT5G52580.3 | 24.930 | 357 | 219 | 13 | 80 | 416 | 301 | 628 | 4.31e-15 | 78.2 |
| Msa0340590 | AT3G59570.2 | 31.361 | 169 | 92 | 4 | 210 | 377 | 363 | 508 | 4.66e-15 | 78.2 |
| Msa0340590 | AT3G59570.3 | 31.361 | 169 | 92 | 4 | 210 | 377 | 363 | 508 | 5.97e-15 | 77.8 |
| Msa0340590 | AT3G59570.1 | 31.361 | 169 | 92 | 4 | 210 | 377 | 363 | 508 | 6.34e-15 | 77.8 |
| Msa0340590 | AT3G02460.2 | 24.900 | 249 | 137 | 6 | 152 | 393 | 88 | 293 | 9.21e-15 | 75.5 |
| Msa0340590 | AT3G02460.5 | 25.641 | 234 | 124 | 6 | 152 | 378 | 88 | 278 | 9.78e-15 | 75.1 |
| Msa0340590 | AT5G52580.2 | 25.497 | 302 | 180 | 11 | 131 | 416 | 367 | 639 | 3.35e-14 | 75.5 |
| Msa0340590 | AT2G37290.3 | 24.234 | 359 | 221 | 10 | 86 | 435 | 248 | 564 | 4.24e-14 | 75.1 |
| Msa0340590 | AT2G37290.1 | 24.234 | 359 | 221 | 10 | 86 | 435 | 248 | 564 | 5.06e-14 | 75.1 |
| Msa0340590 | AT4G28550.3 | 25.581 | 172 | 101 | 4 | 209 | 377 | 166 | 313 | 4.37e-11 | 64.7 |
Find 136 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAAGATGTTTGTGAATT+TGG | 0.165423 | 2_4:-61944790 | Msa0340590:five_prime_UTR |
| TCGTCTGAGCGTTCCGTATC+AGG | 0.228799 | 2_4:+61942512 | None:intergenic |
| CCATCTTGTCACACGCCTTT+GGG | 0.282740 | 2_4:-61940485 | Msa0340590:CDS |
| TCCATCTTGTCACACGCCTT+TGG | 0.286854 | 2_4:-61940486 | Msa0340590:CDS |
| AAGACAAGCCTTTGAATTCC+TGG | 0.289816 | 2_4:+61941426 | None:intergenic |
| TACCACCCATGGAAGATTTC+CGG | 0.302895 | 2_4:+61943663 | None:intergenic |
| GGAATTCAGCAGAGGCATTT+AGG | 0.303007 | 2_4:+61939689 | None:intergenic |
| TCTGGAACCATGGTTATATT+AGG | 0.309896 | 2_4:-61943596 | Msa0340590:intron |
| CTTGAACATTTCTGAGGGTT+TGG | 0.311920 | 2_4:+61944575 | None:intergenic |
| TTCCTATCAGAATACTTAGA+AGG | 0.315927 | 2_4:-61941573 | Msa0340590:CDS |
| CACCAACTAATTCAGATAGA+AGG | 0.337858 | 2_4:-61942598 | Msa0340590:CDS |
| TTCAAGCCATATGGAGAATC+AGG | 0.344007 | 2_4:-61940736 | Msa0340590:CDS |
| AAGAAAAGAAAAGTGAAGTT+TGG | 0.349008 | 2_4:-61944827 | Msa0340590:five_prime_UTR |
| CCCTGAACATATCCACTTGC+TGG | 0.349458 | 2_4:+61941630 | None:intergenic |
| GGTAGATCCGATAGATAATT+CGG | 0.350997 | 2_4:-61943961 | Msa0340590:CDS |
| CTTCAGTTGGGTTCTCTACA+TGG | 0.352778 | 2_4:+61943690 | None:intergenic |
| TGTCTTTAAGTTGAAGGAAT+TGG | 0.360423 | 2_4:-61941409 | Msa0340590:CDS |
| TGATATGTTGGAATTTGATT+TGG | 0.362090 | 2_4:+61944669 | None:intergenic |
| CCAGTCCCTGATTCTCCATA+TGG | 0.362525 | 2_4:+61940730 | None:intergenic |
| ATTTCTGAACTTGTGGTTGC+TGG | 0.363338 | 2_4:+61942344 | None:intergenic |
| GCAACATCAGGTACAGTTCT+TGG | 0.375969 | 2_4:+61942373 | None:intergenic |
| CTAAAGGGTCGTAGCATTCC+TGG | 0.383114 | 2_4:-61944005 | Msa0340590:CDS |
| TCCAGCAAGTGGATATGTTC+AGG | 0.385704 | 2_4:-61941631 | Msa0340590:CDS |
| GTTGTTCATGGTTGATATGT+TGG | 0.393129 | 2_4:+61944657 | None:intergenic |
| GAGGCATTTAGGCAGCTAAA+TGG | 0.395459 | 2_4:+61939700 | None:intergenic |
| AAGGCTTGTCTTTAAGTTGA+AGG | 0.402702 | 2_4:-61941415 | Msa0340590:CDS |
| GAATTGGTCAGGAGGATTGA+TGG | 0.404086 | 2_4:-61941393 | Msa0340590:intron |
| CACAATGGAAGCAAGCCATT+TGG | 0.405862 | 2_4:-61943749 | Msa0340590:CDS |
| AGTTCCTCATATAGTGATAC+TGG | 0.414241 | 2_4:-61943912 | Msa0340590:CDS |
| AACACCTTCCAACTCAGAAC+TGG | 0.415204 | 2_4:-61939794 | Msa0340590:CDS |
| TTCTTTGTCAAGGTTACTAA+AGG | 0.415801 | 2_4:-61944021 | Msa0340590:intron |
| TCCCTTCTATCTGAATTAGT+TGG | 0.425652 | 2_4:+61942596 | None:intergenic |
| TTCTTCAATTTGCTTTCCGC+TGG | 0.426482 | 2_4:-61940704 | Msa0340590:CDS |
| TAGAAGGGAGCATAGATAAC+TGG | 0.429552 | 2_4:-61941557 | Msa0340590:CDS |
| GTGAAGTTTGGAGTGGTTGA+AGG | 0.434199 | 2_4:-61944815 | Msa0340590:five_prime_UTR |
| TGCTTGTCAAAATTGCTTGA+TGG | 0.434811 | 2_4:-61941477 | Msa0340590:CDS |
| AATATATACACAAGGAAGTC+AGG | 0.439682 | 2_4:+61940433 | None:intergenic |
| ACTCACCGTAAGAAGAAAAC+TGG | 0.439969 | 2_4:+61940408 | None:intergenic |
| TTCTCCATATGGCTTGAAAC+AGG | 0.439984 | 2_4:+61940741 | None:intergenic |
| TATCTATCGGATCTACCCTC+TGG | 0.446012 | 2_4:+61943967 | None:intergenic |
| TTAAGTTGAAGGAATTGGTC+AGG | 0.452027 | 2_4:-61941404 | Msa0340590:CDS |
| ACTGTAGGACGCATATAATC+TGG | 0.454179 | 2_4:+61942963 | None:intergenic |
| AGATCCTGTTTCAAGCCATA+TGG | 0.461315 | 2_4:-61940745 | Msa0340590:CDS |
| GAACTGGACTGATCAGGAAC+TGG | 0.462972 | 2_4:-61939778 | Msa0340590:CDS |
| TCTGAGTTGGAAGGTGTTGA+AGG | 0.469826 | 2_4:+61939799 | None:intergenic |
| TGCAATGTAATATCTTGTAA+AGG | 0.470702 | 2_4:-61939540 | Msa0340590:three_prime_UTR |
| CTATCGTTGGTAGTTCCAAA+TGG | 0.472101 | 2_4:+61943734 | None:intergenic |
| AACTGAAAATTAACTCCCAT+TGG | 0.475238 | 2_4:+61939445 | None:intergenic |
| AACTCAGAACTGGACTGATC+AGG | 0.476523 | 2_4:-61939784 | Msa0340590:CDS |
| TCTTTGTCAAGGTTACTAAA+GGG | 0.477125 | 2_4:-61944020 | Msa0340590:intron |
| CACTATATGAGGAACTCCTT+TGG | 0.478396 | 2_4:+61943919 | None:intergenic |
| GAGGAACTCCTTTGGTAAGT+TGG | 0.479046 | 2_4:+61943927 | None:intergenic |
| ATAAATTGCGTGAATTAGCT+TGG | 0.481343 | 2_4:-61942995 | Msa0340590:CDS |
| CATCTTCTTCCAGGGCCATT+CGG | 0.484264 | 2_4:-61941656 | Msa0340590:intron |
| TTCAGTTGGGTTCTCTACAT+GGG | 0.488921 | 2_4:+61943691 | None:intergenic |
| ATTTCCGGACTTCTTCAGTT+GGG | 0.489184 | 2_4:+61943678 | None:intergenic |
| AAGTTCACAAAGGTTCTCTC+TGG | 0.491096 | 2_4:-61943614 | Msa0340590:CDS |
| TTGCAAAATACAAGTAAGAA+TGG | 0.496112 | 2_4:+61939558 | None:intergenic |
| CCCAAAGGCGTGTGACAAGA+TGG | 0.496262 | 2_4:+61940485 | None:intergenic |
| TTTGGTTGAATCGAGAATCA+AGG | 0.499333 | 2_4:+61944593 | None:intergenic |
| TCCTATCAGAATACTTAGAA+GGG | 0.501199 | 2_4:-61941572 | Msa0340590:CDS |
| TGTGCCAGTATCACTATATG+AGG | 0.509178 | 2_4:+61943908 | None:intergenic |
| TCCAGTGATTTCTGAACTTG+TGG | 0.509701 | 2_4:+61942337 | None:intergenic |
| GTAGATCCGATAGATAATTC+GGG | 0.510981 | 2_4:-61943960 | Msa0340590:CDS |
| TGATCAGTCCAGTTCTGAGT+TGG | 0.511650 | 2_4:+61939786 | None:intergenic |
| GATTTCCGGACTTCTTCAGT+TGG | 0.513734 | 2_4:+61943677 | None:intergenic |
| TGAGATCAGCATGCTTCGCC+AGG | 0.514763 | 2_4:-61942489 | Msa0340590:intron |
| ATGTAGAGGCTGACTGCTAT+TGG | 0.515608 | 2_4:-61941500 | Msa0340590:CDS |
| TCAGTTATTGATGATTTGGA+TGG | 0.516262 | 2_4:-61939428 | Msa0340590:three_prime_UTR |
| GTATTATGATATTCCTGATA+CGG | 0.517822 | 2_4:-61942525 | Msa0340590:CDS |
| CCAGCAAGTGGATATGTTCA+GGG | 0.518965 | 2_4:-61941630 | Msa0340590:CDS |
| TGCTGGAAGAATGCAACATC+AGG | 0.522302 | 2_4:+61942361 | None:intergenic |
| TCCCTTCTAAGTATTCTGAT+AGG | 0.522873 | 2_4:+61941571 | None:intergenic |
| TACAGTGTGGAGACTTCTCT+TGG | 0.524492 | 2_4:-61942946 | Msa0340590:intron |
| CAAACCCTCAGAAATGTTCA+AGG | 0.526816 | 2_4:-61944574 | Msa0340590:CDS |
| AGTTTGGAGTGGTTGAAGGA+AGG | 0.526855 | 2_4:-61944811 | Msa0340590:five_prime_UTR |
| AGAACCCAACTGAAGAAGTC+CGG | 0.535528 | 2_4:-61943682 | Msa0340590:CDS |
| CATACCCTTGAACATTTCTG+AGG | 0.538182 | 2_4:+61944569 | None:intergenic |
| TCGAGAATCAAGGATTCCTA+TGG | 0.544935 | 2_4:+61944603 | None:intergenic |
| ATCTATCGGATCTACCCTCT+GGG | 0.548642 | 2_4:+61943968 | None:intergenic |
| AACAAGCACCACACACTGAA+GGG | 0.548739 | 2_4:+61939613 | None:intergenic |
| CTTGCAATGTCAACAACCAA+TGG | 0.553374 | 2_4:-61939461 | Msa0340590:three_prime_UTR |
| ATCAGTAGTCCTACCACCCA+TGG | 0.554168 | 2_4:+61943652 | None:intergenic |
| AGAAGTCCGGAAATCTTCCA+TGG | 0.554526 | 2_4:-61943669 | Msa0340590:CDS |
| TTGCAATGTCAACAACCAAT+GGG | 0.554729 | 2_4:-61939460 | Msa0340590:three_prime_UTR |
| TTGCTCAACCAGGAATTCAA+AGG | 0.558227 | 2_4:-61941434 | Msa0340590:CDS |
| TACTCTCTCGTGCATTTATG+TGG | 0.564315 | 2_4:-61939749 | Msa0340590:CDS |
| CATTACACATTTGCTCAACC+AGG | 0.564692 | 2_4:-61941444 | Msa0340590:CDS |
| AAAGGTTCTCTCTGGAACCA+TGG | 0.569589 | 2_4:-61943606 | Msa0340590:CDS |
| AGTTGGGTTCTCTACATGGG+AGG | 0.571413 | 2_4:+61943694 | None:intergenic |
| ACCAACTAATTCAGATAGAA+GGG | 0.572533 | 2_4:-61942597 | Msa0340590:CDS |
| GCCATTCGGCATCCAGCAAG+TGG | 0.577019 | 2_4:-61941642 | Msa0340590:CDS |
| CCATATGGAGAATCAGGGAC+TGG | 0.579566 | 2_4:-61940730 | Msa0340590:CDS |
| TGTAATATCTTGTAAAGGAG+AGG | 0.580056 | 2_4:-61939535 | Msa0340590:three_prime_UTR |
| ATACACAAGGAAGTCAGGTA+AGG | 0.582696 | 2_4:+61940438 | None:intergenic |
| TCGTGCAACTGAAACAATAG+AGG | 0.583962 | 2_4:-61943880 | Msa0340590:intron |
| GTAAAATCTTATTGACCCAG+AGG | 0.584370 | 2_4:-61943983 | Msa0340590:CDS |
| TACAGTTCTTGGACAATCAA+CGG | 0.584447 | 2_4:+61942384 | None:intergenic |
| GACTGATCAGGAACTGGAGA+TGG | 0.587796 | 2_4:-61939772 | Msa0340590:CDS |
| ATTTAGGCAGCTAAATGGCT+AGG | 0.588967 | 2_4:+61939705 | None:intergenic |
| AGTTGAAGGAATTGGTCAGG+AGG | 0.592078 | 2_4:-61941401 | Msa0340590:CDS |
| AAACAAGCACCACACACTGA+AGG | 0.594599 | 2_4:+61939612 | None:intergenic |
| AAGGCGTGTGACAAGATGGA+AGG | 0.595513 | 2_4:+61940489 | None:intergenic |
| GGAAATCTTCCATGGGTGGT+AGG | 0.596520 | 2_4:-61943661 | Msa0340590:CDS |
| TCCACTTGCTGGATGCCGAA+TGG | 0.597438 | 2_4:+61941641 | None:intergenic |
| ATACCCTTGAACATTTCTGA+GGG | 0.600688 | 2_4:+61944570 | None:intergenic |
| ACCACAAGTTCAGAAATCAC+TGG | 0.601882 | 2_4:-61942338 | Msa0340590:CDS |
| TATAAGCCCGAATTATCTAT+CGG | 0.604731 | 2_4:+61943954 | None:intergenic |
| AAGAAAAGTGAAGTTTGGAG+TGG | 0.605523 | 2_4:-61944822 | Msa0340590:five_prime_UTR |
| TGGGACACATATCTAGCTGA+AGG | 0.612669 | 2_4:-61940466 | Msa0340590:CDS |
| GACAAAGACACTAGTACCAT+AGG | 0.614049 | 2_4:-61944619 | Msa0340590:CDS |
| ACTAATTCAGATAGAAGGGA+GGG | 0.621364 | 2_4:-61942593 | Msa0340590:CDS |
| CAGTCCAGTTCTGAGTTGGA+AGG | 0.623870 | 2_4:+61939790 | None:intergenic |
| CAGCTAGATATGTGTCCCAA+AGG | 0.627022 | 2_4:+61940470 | None:intergenic |
| ACAAGCACCACACACTGAAG+GGG | 0.629079 | 2_4:+61939614 | None:intergenic |
| AGATAAAATCTCTAATGTAG+AGG | 0.630211 | 2_4:-61941514 | Msa0340590:CDS |
| TCAAGCCATATGGAGAATCA+GGG | 0.631147 | 2_4:-61940735 | Msa0340590:CDS |
| GTCCGGAAATCTTCCATGGG+TGG | 0.634104 | 2_4:-61943665 | Msa0340590:CDS |
| AGGCGTGTGACAAGATGGAA+GGG | 0.635093 | 2_4:+61940490 | None:intergenic |
| GAAGTCCGGAAATCTTCCAT+GGG | 0.635178 | 2_4:-61943668 | Msa0340590:CDS |
| AAGTATACCTAATATAACCA+TGG | 0.637927 | 2_4:+61943589 | None:intergenic |
| TAAAATCTTATTGACCCAGA+GGG | 0.642301 | 2_4:-61943982 | Msa0340590:CDS |
| AACTAATTCAGATAGAAGGG+AGG | 0.643726 | 2_4:-61942594 | Msa0340590:CDS |
| AAACCCTCAGAAATGTTCAA+GGG | 0.645133 | 2_4:-61944573 | Msa0340590:intron |
| AAGAGAAGTCTCCACACTGT+AGG | 0.654955 | 2_4:+61942948 | None:intergenic |
| TGGAGCGTATTCTTTACGCA+TGG | 0.656098 | 2_4:-61942318 | Msa0340590:intron |
| TATACTCACCAACTTACCAA+AGG | 0.657656 | 2_4:-61943935 | Msa0340590:CDS |
| CAGCAAGTGGATATGTTCAG+GGG | 0.660340 | 2_4:-61941629 | Msa0340590:CDS |
| AAGAGTTATGAAGTTCACAA+AGG | 0.667469 | 2_4:-61943624 | Msa0340590:CDS |
| ATTATATGCGTCCTACAGTG+TGG | 0.667641 | 2_4:-61942959 | Msa0340590:CDS |
| AACTGGCAAATATATACACA+AGG | 0.671598 | 2_4:+61940425 | None:intergenic |
| TAAATACAGGAATTCAGCAG+AGG | 0.673718 | 2_4:+61939681 | None:intergenic |
| TTGCGTGAATTAGCTTGGAG+TGG | 0.688224 | 2_4:-61942990 | Msa0340590:CDS |
| TTAGAAGACAGTTGAACCAG+CGG | 0.695324 | 2_4:+61940688 | None:intergenic |
| ATACAGGAAGAAGTTCACAA+TGG | 0.706853 | 2_4:-61943764 | Msa0340590:intron |
| CAACTGTCTTCTAATCCGCG+AGG | 0.710013 | 2_4:-61940679 | Msa0340590:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATCAACTTTTTTAAT+GGG | + | chr2_4:61939843-61939862 | None:intergenic | 10.0% |
| !!! | AAAAAAATCAACTTTTTTAA+TGG | + | chr2_4:61939844-61939863 | None:intergenic | 10.0% |
| !! | AAACTAAATAAATATTATTC+AGG | + | chr2_4:61941156-61941175 | None:intergenic | 10.0% |
| !!! | ATTTTGAAAAAGAATAATTA+GGG | - | chr2_4:61941505-61941524 | Msa0340590:CDS | 10.0% |
| !! | AAACTTAAACAAAAAGAAAA+AGG | - | chr2_4:61939377-61939396 | Msa0340590:three_prime_UTR | 15.0% |
| !! | AAACAAAACAAATTACTAAT+TGG | + | chr2_4:61940137-61940156 | None:intergenic | 15.0% |
| !!! | ATTTTACTATTCATATTTTG+TGG | - | chr2_4:61940378-61940397 | Msa0340590:intron | 15.0% |
| !! | AAATATCAAGTTATTTAGAA+TGG | + | chr2_4:61940804-61940823 | None:intergenic | 15.0% |
| !! | ATATCTAAACAAATTATTGA+GGG | - | chr2_4:61941404-61941423 | Msa0340590:CDS | 15.0% |
| !!! | GATTTTGAAAAAGAATAATT+AGG | - | chr2_4:61941504-61941523 | Msa0340590:CDS | 15.0% |
| !!! | TTTTGAAAAAGAATAATTAG+GGG | - | chr2_4:61941506-61941525 | Msa0340590:CDS | 15.0% |
| !! | ACTAGAATGAAAATAATATA+AGG | + | chr2_4:61941968-61941987 | None:intergenic | 15.0% |
| !! | AAATGTATGTTTATATATCA+TGG | - | chr2_4:61942531-61942550 | Msa0340590:CDS | 15.0% |
| !! | AAACAAATTACAATATAAAC+GGG | + | chr2_4:61943864-61943883 | None:intergenic | 15.0% |
| !! | CAAACAAATTACAATATAAA+CGG | + | chr2_4:61943865-61943884 | None:intergenic | 15.0% |
| !!! | GAAAAGATAATATTTTTGCA+AGG | + | chr2_4:61939718-61939737 | None:intergenic | 20.0% |
| !! | TGATAAACTAATCAACAAAT+CGG | + | chr2_4:61939804-61939823 | None:intergenic | 20.0% |
| !!! | TTTGTTGATTAGTTTATCAT+CGG | - | chr2_4:61939805-61939824 | Msa0340590:CDS | 20.0% |
| !! | AACAACATATCAATTGTATA+AGG | + | chr2_4:61940193-61940212 | None:intergenic | 20.0% |
| !! | ATATACATTTATGAGACTTA+TGG | - | chr2_4:61940413-61940432 | Msa0340590:intron | 20.0% |
| !!! | TGTTTTTAATTTACTATCGT+TGG | + | chr2_4:61940515-61940534 | None:intergenic | 20.0% |
| !!! | AGTAGTTAATTTTTTAGTAG+TGG | + | chr2_4:61941040-61941059 | None:intergenic | 20.0% |
| !! | ACAAGTTTAACATTGAAAAA+TGG | + | chr2_4:61941180-61941199 | None:intergenic | 20.0% |
| !! | ATAGTTAAGGATGAAAATTA+TGG | + | chr2_4:61941211-61941230 | None:intergenic | 20.0% |
| !! | GATATCTAAACAAATTATTG+AGG | - | chr2_4:61941403-61941422 | Msa0340590:CDS | 20.0% |
| !! | GACTTAAAATGATTATCAAT+AGG | + | chr2_4:61941539-61941558 | None:intergenic | 20.0% |
| !!! | GATAATCATTTTAAGTCAAT+AGG | - | chr2_4:61941542-61941561 | Msa0340590:CDS | 20.0% |
| !!! | TTTTAGTCAATAATTAAGAG+TGG | + | chr2_4:61941784-61941803 | None:intergenic | 20.0% |
| !! | TTATCAATCAGTAAGATAAT+CGG | + | chr2_4:61942169-61942188 | None:intergenic | 20.0% |
| !!! | TTACTGATTGATAATATTGA+TGG | - | chr2_4:61942175-61942194 | Msa0340590:intron | 20.0% |
| !! | TACATAACACAGTAATAAAT+TGG | - | chr2_4:61942423-61942442 | Msa0340590:intron | 20.0% |
| !!! | GATTTTATCTGAAGATAAAT+CGG | + | chr2_4:61942709-61942728 | None:intergenic | 20.0% |
| !!! | TATGTTTTAAGAAAAACAAC+AGG | + | chr2_4:61942882-61942901 | None:intergenic | 20.0% |
| !!! | TTAAATTTTTGTATGCATCT+TGG | - | chr2_4:61943010-61943029 | Msa0340590:intron | 20.0% |
| !!! | TAAATTTTTGTATGCATCTT+GGG | - | chr2_4:61943011-61943030 | Msa0340590:intron | 20.0% |
| !! | ACAAACAAAATAAGTTAGTT+TGG | + | chr2_4:61943164-61943183 | None:intergenic | 20.0% |
| !!! | TTTTACTTCTCTAAAATTGA+GGG | + | chr2_4:61943256-61943275 | None:intergenic | 20.0% |
| !! | AAACAAATATGTTGAAACTT+AGG | - | chr2_4:61943406-61943425 | Msa0340590:intron | 20.0% |
| !! | AACAAATATGTTGAAACTTA+GGG | - | chr2_4:61943407-61943426 | Msa0340590:intron | 20.0% |
| !! | AACAACGCTATAATTAATAA+AGG | - | chr2_4:61943624-61943643 | Msa0340590:CDS | 20.0% |
| !! | ACAACGCTATAATTAATAAA+GGG | - | chr2_4:61943625-61943644 | Msa0340590:CDS | 20.0% |
| !! | TATTAAATTTCACGAGATAA+TGG | - | chr2_4:61943654-61943673 | Msa0340590:CDS | 20.0% |
| !!! | CGTTTATATTGTAATTTGTT+TGG | - | chr2_4:61943863-61943882 | Msa0340590:intron | 20.0% |
| !!! | ATTCTTTATTTTTACTGTCT+AGG | - | chr2_4:61944253-61944272 | Msa0340590:intron | 20.0% |
| !!! | TAACTCTTATATTTTCAGTA+TGG | - | chr2_4:61944284-61944303 | Msa0340590:intron | 20.0% |
| !! | CAAATAGAAAAACTAAATAC+AGG | + | chr2_4:61944568-61944587 | None:intergenic | 20.0% |
| !!! | ATTTTCAGTTATTGATGATT+TGG | - | chr2_4:61944801-61944820 | Msa0340590:five_prime_UTR | 20.0% |
| ! | AAGAAAAGAAAAGTGAAGTT+TGG | - | chr2_4:61939406-61939425 | Msa0340590:three_prime_UTR | 25.0% |
| !!! | GAATTTGATTTGGTTTTGTT+TGG | + | chr2_4:61939557-61939576 | None:intergenic | 25.0% |
| ! | TGATATGTTGGAATTTGATT+TGG | + | chr2_4:61939567-61939586 | None:intergenic | 25.0% |
| ! | TAATTTCACCCCTAAAAAAA+TGG | - | chr2_4:61939739-61939758 | Msa0340590:CDS | 25.0% |
| ! | AATTTCACCCCTAAAAAAAT+GGG | - | chr2_4:61939740-61939759 | Msa0340590:CDS | 25.0% |
| ! | GATAAACTAATCAACAAATC+GGG | + | chr2_4:61939803-61939822 | None:intergenic | 25.0% |
| !! | ATTAGTTTATCATCGGATAT+AGG | - | chr2_4:61939812-61939831 | Msa0340590:CDS | 25.0% |
| !!! | ATGATTTTTTCTTAGTGTTG+TGG | - | chr2_4:61939962-61939981 | Msa0340590:intron | 25.0% |
| ! | AATTGTTAAGAACTGAAACA+GGG | + | chr2_4:61940041-61940060 | None:intergenic | 25.0% |
| ! | TAATTGTTAAGAACTGAAAC+AGG | + | chr2_4:61940042-61940061 | None:intergenic | 25.0% |
| !! | CTATTCATATTTTGTGGTTA+TGG | - | chr2_4:61940384-61940403 | Msa0340590:intron | 25.0% |
| ! | AAGTATACCTAATATAACCA+TGG | + | chr2_4:61940647-61940666 | None:intergenic | 25.0% |
| ! | ACATATGATACTTTCATAAC+TGG | + | chr2_4:61940743-61940762 | None:intergenic | 25.0% |
| ! | AAGTATCATATGTAATTCTG+AGG | - | chr2_4:61940750-61940769 | Msa0340590:intron | 25.0% |
| ! | GATTATGATAAAGCAGTAAA+TGG | + | chr2_4:61940915-61940934 | None:intergenic | 25.0% |
| !! | TTGACAATGAACAACATTTT+GGG | + | chr2_4:61941091-61941110 | None:intergenic | 25.0% |
| ! | ATTTATCTACAGGATAGTTA+AGG | + | chr2_4:61941224-61941243 | None:intergenic | 25.0% |
| !!! | AGTTCAGATCAGAATTTTTT+AGG | - | chr2_4:61941353-61941372 | Msa0340590:intron | 25.0% |
| !! | TGTGTATTCTTGTTATACTT+TGG | - | chr2_4:61941379-61941398 | Msa0340590:intron | 25.0% |
| ! | GTTTCAGAATTATTCTTTCA+TGG | - | chr2_4:61941430-61941449 | Msa0340590:CDS | 25.0% |
| ! | TGCTTATATGAAAAATGCAT+TGG | - | chr2_4:61941464-61941483 | Msa0340590:CDS | 25.0% |
| !!! | AAAGAATAATTAGGGGTATT+TGG | - | chr2_4:61941513-61941532 | Msa0340590:CDS | 25.0% |
| ! | TCAAGAAGAAAAATTAACCA+TGG | + | chr2_4:61941584-61941603 | None:intergenic | 25.0% |
| ! | GTATTATGATATTCCTGATA+CGG | - | chr2_4:61941708-61941727 | Msa0340590:intron | 25.0% |
| ! | AATTAAGAGTGGCATAATTA+AGG | + | chr2_4:61941773-61941792 | None:intergenic | 25.0% |
| !!! | TTGTTGTGGATTTTTTATTG+AGG | - | chr2_4:61941993-61942012 | Msa0340590:intron | 25.0% |
| !! | TTTTTATTGAGGTCAAAAGA+TGG | - | chr2_4:61942004-61942023 | Msa0340590:intron | 25.0% |
| ! | TTATGTACTTCAAATGCAAA+AGG | + | chr2_4:61942410-61942429 | None:intergenic | 25.0% |
| ! | AACACAGTAATAAATTGGAT+TGG | - | chr2_4:61942428-61942447 | Msa0340590:intron | 25.0% |
| ! | ACTCTTGAGATCTTTAATTA+TGG | - | chr2_4:61942475-61942494 | Msa0340590:intron | 25.0% |
| ! | GATAGGAAAACAACAAAAAA+TGG | + | chr2_4:61942648-61942667 | None:intergenic | 25.0% |
| ! | AGATAAAATCTCTAATGTAG+AGG | - | chr2_4:61942719-61942738 | Msa0340590:intron | 25.0% |
| ! | AAACTGATATATTGAAAGAG+AGG | + | chr2_4:61943196-61943215 | None:intergenic | 25.0% |
| !!! | GTTTTACTTCTCTAAAATTG+AGG | + | chr2_4:61943257-61943276 | None:intergenic | 25.0% |
| !!! | CATTTTATTTTATGTCACCA+TGG | + | chr2_4:61943372-61943391 | None:intergenic | 25.0% |
| !! | TTTCAGTAGCAGATTTTATT+TGG | + | chr2_4:61943454-61943473 | None:intergenic | 25.0% |
| !!! | AGAAATTTGTTGAACTTGTA+AGG | + | chr2_4:61943597-61943616 | None:intergenic | 25.0% |
| !! | AATACTAGCATTTTACAGAA+TGG | + | chr2_4:61944007-61944026 | None:intergenic | 25.0% |
| ! | TTGCAAAATACAAGTAAGAA+TGG | + | chr2_4:61944678-61944697 | None:intergenic | 25.0% |
| ! | TGCAATGTAATATCTTGTAA+AGG | - | chr2_4:61944693-61944712 | Msa0340590:five_prime_UTR | 25.0% |
| GGAAAAGATGTTTGTGAATT+TGG | - | chr2_4:61939443-61939462 | Msa0340590:three_prime_UTR | 30.0% | |
| !!! | TGATTTGGTTTTGTTTGGTT+TGG | + | chr2_4:61939552-61939571 | None:intergenic | 30.0% |
| !!! | TGAAATGCCCATTTTTTTAG+GGG | + | chr2_4:61939750-61939769 | None:intergenic | 30.0% |
| !!! | CTGAAATGCCCATTTTTTTA+GGG | + | chr2_4:61939751-61939770 | None:intergenic | 30.0% |
| ACACAGATCAGATGAAAATT+GGG | + | chr2_4:61939931-61939950 | None:intergenic | 30.0% | |
| TACACAGATCAGATGAAAAT+TGG | + | chr2_4:61939932-61939951 | None:intergenic | 30.0% | |
| TCTGATCTGTGTAATCAAAT+TGG | - | chr2_4:61939939-61939958 | Msa0340590:intron | 30.0% | |
| TGTGGATATGAAATGAAATG+TGG | - | chr2_4:61939980-61939999 | Msa0340590:intron | 30.0% | |
| TTTCTGATTGCTGTCAAAAT+TGG | - | chr2_4:61940083-61940102 | Msa0340590:intron | 30.0% | |
| !! | GATATGTTGTTTCTTTGTCA+AGG | - | chr2_4:61940202-61940221 | Msa0340590:intron | 30.0% |
| TTCTTTGTCAAGGTTACTAA+AGG | - | chr2_4:61940212-61940231 | Msa0340590:intron | 30.0% | |
| TCTTTGTCAAGGTTACTAAA+GGG | - | chr2_4:61940213-61940232 | Msa0340590:intron | 30.0% | |
| TAAAATCTTATTGACCCAGA+GGG | - | chr2_4:61940251-61940270 | Msa0340590:intron | 30.0% | |
| TATAAGCCCGAATTATCTAT+CGG | + | chr2_4:61940282-61940301 | None:intergenic | 30.0% | |
| AAGAGTTATGAAGTTCACAA+AGG | - | chr2_4:61940609-61940628 | Msa0340590:intron | 30.0% | |
| ! | GTTTTATGTGAACTTAGGTT+TGG | - | chr2_4:61940851-61940870 | Msa0340590:intron | 30.0% |
| !!! | CAATTGATATCTGCTTTTTC+AGG | - | chr2_4:61940944-61940963 | Msa0340590:intron | 30.0% |
| ! | ATATAGCTTCTTGTTGTGAT+GGG | + | chr2_4:61941016-61941035 | None:intergenic | 30.0% |
| ! | AATATAGCTTCTTGTTGTGA+TGG | + | chr2_4:61941017-61941036 | None:intergenic | 30.0% |
| ! | CTTGACAATGAACAACATTT+TGG | + | chr2_4:61941092-61941111 | None:intergenic | 30.0% |
| AATTCACGCAATTTATCTAC+AGG | + | chr2_4:61941234-61941253 | None:intergenic | 30.0% | |
| ATAAATTGCGTGAATTAGCT+TGG | - | chr2_4:61941238-61941257 | Msa0340590:intron | 30.0% | |
| TCTAAACAAATTATTGAGGG+TGG | - | chr2_4:61941407-61941426 | Msa0340590:CDS | 30.0% | |
| CTAAACAAATTATTGAGGGT+GGG | - | chr2_4:61941408-61941427 | Msa0340590:CDS | 30.0% | |
| TTTAAAGATGAACTGACAAC+AGG | - | chr2_4:61941606-61941625 | Msa0340590:CDS | 30.0% | |
| TTAAAGATGAACTGACAACA+GGG | - | chr2_4:61941607-61941626 | Msa0340590:CDS | 30.0% | |
| ACCAACTAATTCAGATAGAA+GGG | - | chr2_4:61941636-61941655 | Msa0340590:CDS | 30.0% | |
| ATCCTGTCTTAAATAGTTAG+CGG | - | chr2_4:61942101-61942120 | Msa0340590:intron | 30.0% | |
| AGATAATCGGAACAAAATCT+AGG | + | chr2_4:61942156-61942175 | None:intergenic | 30.0% | |
| ! | AGCTTAATCCATTTCTAGAA+GGG | + | chr2_4:61942217-61942236 | None:intergenic | 30.0% |
| ! | AAGCTTAATCCATTTCTAGA+AGG | + | chr2_4:61942218-61942237 | None:intergenic | 30.0% |
| TAAGCAAAAAATAGTCGACA+AGG | + | chr2_4:61942509-61942528 | None:intergenic | 30.0% | |
| TTCCTATCAGAATACTTAGA+AGG | - | chr2_4:61942660-61942679 | Msa0340590:intron | 30.0% | |
| TCCTATCAGAATACTTAGAA+GGG | - | chr2_4:61942661-61942680 | Msa0340590:intron | 30.0% | |
| !! | TGTCTTTAAGTTGAAGGAAT+TGG | - | chr2_4:61942824-61942843 | Msa0340590:intron | 30.0% |
| ACATTAGGGAATGCAAAAAT+GGG | + | chr2_4:61942932-61942951 | None:intergenic | 30.0% | |
| AACATTAGGGAATGCAAAAA+TGG | + | chr2_4:61942933-61942952 | None:intergenic | 30.0% | |
| GTATGACACTATGAAATGAT+AGG | - | chr2_4:61943057-61943076 | Msa0340590:intron | 30.0% | |
| ATCAGACATCACACTTAAAA+AGG | + | chr2_4:61943708-61943727 | None:intergenic | 30.0% | |
| AATATATACACAAGGAAGTC+AGG | + | chr2_4:61943803-61943822 | None:intergenic | 30.0% | |
| AACTGGCAAATATATACACA+AGG | + | chr2_4:61943811-61943830 | None:intergenic | 30.0% | |
| ! | ATTTGCCAGTTTTCTTCTTA+CGG | - | chr2_4:61943820-61943839 | Msa0340590:intron | 30.0% |
| ATCTTGTAGTCAAGATGATA+AGG | - | chr2_4:61943896-61943915 | Msa0340590:CDS | 30.0% | |
| ! | CTGAATTTTTATGCTGAACT+AGG | - | chr2_4:61944117-61944136 | Msa0340590:intron | 30.0% |
| TATAACCTAACATGCTAAAC+GGG | + | chr2_4:61944181-61944200 | None:intergenic | 30.0% | |
| CTATAACCTAACATGCTAAA+CGG | + | chr2_4:61944182-61944201 | None:intergenic | 30.0% | |
| !!! | TTATTTTTACTGTCTAGGAG+AGG | - | chr2_4:61944258-61944277 | Msa0340590:intron | 30.0% |
| TGTAATATCTTGTAAAGGAG+AGG | - | chr2_4:61944698-61944717 | Msa0340590:five_prime_UTR | 30.0% | |
| AAGGAGAGGTAAAAATAAAC+TGG | - | chr2_4:61944712-61944731 | Msa0340590:five_prime_UTR | 30.0% | |
| AACTGAAAATTAACTCCCAT+TGG | + | chr2_4:61944791-61944810 | None:intergenic | 30.0% | |
| ! | TCAGTTATTGATGATTTGGA+TGG | - | chr2_4:61944805-61944824 | Msa0340590:five_prime_UTR | 30.0% |
| AAGAAAAGTGAAGTTTGGAG+TGG | - | chr2_4:61939411-61939430 | Msa0340590:three_prime_UTR | 35.0% | |
| !!! | TGGTTTTGTTTGGTTTGGTT+TGG | + | chr2_4:61939547-61939566 | None:intergenic | 35.0% |
| ! | GTTGTTCATGGTTGATATGT+TGG | + | chr2_4:61939579-61939598 | None:intergenic | 35.0% |
| TTTGGTTGAATCGAGAATCA+AGG | + | chr2_4:61939643-61939662 | None:intergenic | 35.0% | |
| AAACCCTCAGAAATGTTCAA+GGG | - | chr2_4:61939660-61939679 | Msa0340590:three_prime_UTR | 35.0% | |
| ATACCCTTGAACATTTCTGA+GGG | + | chr2_4:61939666-61939685 | None:intergenic | 35.0% | |
| !!! | CCTGAAATGCCCATTTTTTT+AGG | + | chr2_4:61939752-61939771 | None:intergenic | 35.0% |
| CCTAAAAAAATGGGCATTTC+AGG | - | chr2_4:61939749-61939768 | Msa0340590:CDS | 35.0% | |
| ACAGATCAGATGAAAATTGG+GGG | + | chr2_4:61939929-61939948 | None:intergenic | 35.0% | |
| CACAGATCAGATGAAAATTG+GGG | + | chr2_4:61939930-61939949 | None:intergenic | 35.0% | |
| ! | TGGGTCAATAAGATTTTACC+AGG | + | chr2_4:61940249-61940268 | None:intergenic | 35.0% |
| GTAAAATCTTATTGACCCAG+AGG | - | chr2_4:61940250-61940269 | Msa0340590:intron | 35.0% | |
| GGTAGATCCGATAGATAATT+CGG | - | chr2_4:61940272-61940291 | Msa0340590:intron | 35.0% | |
| GTAGATCCGATAGATAATTC+GGG | - | chr2_4:61940273-61940292 | Msa0340590:intron | 35.0% | |
| TATACTCACCAACTTACCAA+AGG | - | chr2_4:61940298-61940317 | Msa0340590:intron | 35.0% | |
| AGTTCCTCATATAGTGATAC+TGG | - | chr2_4:61940321-61940340 | Msa0340590:intron | 35.0% | |
| ATACAGGAAGAAGTTCACAA+TGG | - | chr2_4:61940469-61940488 | Msa0340590:CDS | 35.0% | |
| ! | TCTGGAACCATGGTTATATT+AGG | - | chr2_4:61940637-61940656 | Msa0340590:intron | 35.0% |
| GATACTTTCATAACTGGAAG+AGG | + | chr2_4:61940737-61940756 | None:intergenic | 35.0% | |
| GCAACGTGTTAGACTTATTA+TGG | + | chr2_4:61940782-61940801 | None:intergenic | 35.0% | |
| !! | GTCGAGTTTTATGTGAACTT+AGG | - | chr2_4:61940846-61940865 | Msa0340590:intron | 35.0% |
| ! | GTCTTTCATTCCCTTGATTT+TGG | - | chr2_4:61941065-61941084 | Msa0340590:intron | 35.0% |
| ! | ACATTTTGGGCCAAAATCAA+GGG | + | chr2_4:61941078-61941097 | None:intergenic | 35.0% |
| ! | AACATTTTGGGCCAAAATCA+AGG | + | chr2_4:61941079-61941098 | None:intergenic | 35.0% |
| CACCAACTAATTCAGATAGA+AGG | - | chr2_4:61941635-61941654 | Msa0340590:CDS | 35.0% | |
| TCCCTTCTATCTGAATTAGT+TGG | + | chr2_4:61941640-61941659 | None:intergenic | 35.0% | |
| AACTAATTCAGATAGAAGGG+AGG | - | chr2_4:61941639-61941658 | Msa0340590:CDS | 35.0% | |
| ACTAATTCAGATAGAAGGGA+GGG | - | chr2_4:61941640-61941659 | Msa0340590:CDS | 35.0% | |
| TACAGTTCTTGGACAATCAA+CGG | + | chr2_4:61941852-61941871 | None:intergenic | 35.0% | |
| TAATATAAGGCCTGACAAAC+AGG | + | chr2_4:61941955-61941974 | None:intergenic | 35.0% | |
| CATTCTAGTGTTCTTTGTTG+TGG | - | chr2_4:61941979-61941998 | Msa0340590:intron | 35.0% | |
| !!! | GGATTTTAGTTCGAGTAAGA+TGG | - | chr2_4:61942025-61942044 | Msa0340590:intron | 35.0% |
| ATGGTTAGACAGGGTTTATA+AGG | - | chr2_4:61942044-61942063 | Msa0340590:intron | 35.0% | |
| ! | ATCCGCTAACTATTTAAGAC+AGG | + | chr2_4:61942106-61942125 | None:intergenic | 35.0% |
| ! | TGTAGATTCCCTTCTAGAAA+TGG | - | chr2_4:61942206-61942225 | Msa0340590:intron | 35.0% |
| ! | ATACTTCTGTTTCTTCCTAG+CGG | - | chr2_4:61942311-61942330 | Msa0340590:intron | 35.0% |
| ! | TAGTTTCTTTTCCTACGTCA+TGG | + | chr2_4:61942347-61942366 | None:intergenic | 35.0% |
| TCCCTTCTAAGTATTCTGAT+AGG | + | chr2_4:61942665-61942684 | None:intergenic | 35.0% | |
| TGCTTGTCAAAATTGCTTGA+TGG | - | chr2_4:61942756-61942775 | Msa0340590:intron | 35.0% | |
| !! | AAGGCTTGTCTTTAAGTTGA+AGG | - | chr2_4:61942818-61942837 | Msa0340590:intron | 35.0% |
| !! | TTAAGTTGAAGGAATTGGTC+AGG | - | chr2_4:61942829-61942848 | Msa0340590:intron | 35.0% |
| !! | TTGATGGTAACCTTTTTCTC+TGG | - | chr2_4:61942856-61942875 | Msa0340590:intron | 35.0% |
| CATTAGGGAATGCAAAAATG+GGG | + | chr2_4:61942931-61942950 | None:intergenic | 35.0% | |
| GGGTTGTTCACATAACATTA+GGG | + | chr2_4:61942946-61942965 | None:intergenic | 35.0% | |
| TGGGTTGTTCACATAACATT+AGG | + | chr2_4:61942947-61942966 | None:intergenic | 35.0% | |
| CACTAAACCGTATAGACATA+CGG | + | chr2_4:61942984-61943003 | None:intergenic | 35.0% | |
| GTATGTCTATACGGTTTAGT+GGG | - | chr2_4:61942983-61943002 | Msa0340590:CDS | 35.0% | |
| ! | GTCATACTCACATTTTCTCT+AGG | + | chr2_4:61943044-61943063 | None:intergenic | 35.0% |
| AAATGATAGGTTGTCGTACA+AGG | - | chr2_4:61943070-61943089 | Msa0340590:intron | 35.0% | |
| AATGATAGGTTGTCGTACAA+GGG | - | chr2_4:61943071-61943090 | Msa0340590:intron | 35.0% | |
| CCAAATCCAAATGCAAAAGA+GGG | + | chr2_4:61943125-61943144 | None:intergenic | 35.0% | |
| TCCAAATCCAAATGCAAAAG+AGG | + | chr2_4:61943126-61943145 | None:intergenic | 35.0% | |
| ! | CTAAAATTGAGGGCATGTAA+TGG | + | chr2_4:61943246-61943265 | None:intergenic | 35.0% |
| ACCATTAGATACTGCTTTCA+TGG | - | chr2_4:61943342-61943361 | Msa0340590:intron | 35.0% | |
| ACCATGAAAGCAGTATCTAA+TGG | + | chr2_4:61943346-61943365 | None:intergenic | 35.0% | |
| TGGACTGAACAAATTTGACA+CGG | - | chr2_4:61943674-61943693 | Msa0340590:CDS | 35.0% | |
| GTAGTCAAGATGATAAGGAA+TGG | - | chr2_4:61943901-61943920 | Msa0340590:CDS | 35.0% | |
| TGGTAGATTTCAGTAAACGA+CGG | - | chr2_4:61943955-61943974 | Msa0340590:CDS | 35.0% | |
| ! | ATCAAAGTGTTCAACTCAGA+TGG | - | chr2_4:61944034-61944053 | Msa0340590:intron | 35.0% |
| ! | TCAAAGTGTTCAACTCAGAT+GGG | - | chr2_4:61944035-61944054 | Msa0340590:intron | 35.0% |
| ! | GTCTCACATACCCTTTTTAT+TGG | - | chr2_4:61944154-61944173 | Msa0340590:intron | 35.0% |
| CTAAACGGGACCAATAAAAA+GGG | + | chr2_4:61944167-61944186 | None:intergenic | 35.0% | |
| GAATGCCAAAAAACGAACAA+GGG | + | chr2_4:61944237-61944256 | None:intergenic | 35.0% | |
| AGAATGCCAAAAAACGAACA+AGG | + | chr2_4:61944238-61944257 | None:intergenic | 35.0% | |
| TAAATACAGGAATTCAGCAG+AGG | + | chr2_4:61944555-61944574 | None:intergenic | 35.0% | |
| GAAAAAAGTAGGATGGAATG+AGG | + | chr2_4:61944600-61944619 | None:intergenic | 35.0% | |
| TTGCAATGTCAACAACCAAT+GGG | - | chr2_4:61944773-61944792 | Msa0340590:five_prime_UTR | 35.0% | |
| ! | GTCGTTGTTGTTGTTGTTCA+TGG | + | chr2_4:61939591-61939610 | None:intergenic | 40.0% |
| GACAAAGACACTAGTACCAT+AGG | - | chr2_4:61939614-61939633 | Msa0340590:three_prime_UTR | 40.0% | |
| TCGAGAATCAAGGATTCCTA+TGG | + | chr2_4:61939633-61939652 | None:intergenic | 40.0% | |
| ! | CTTGAACATTTCTGAGGGTT+TGG | + | chr2_4:61939661-61939680 | None:intergenic | 40.0% |
| CAAACCCTCAGAAATGTTCA+AGG | - | chr2_4:61939659-61939678 | Msa0340590:three_prime_UTR | 40.0% | |
| CATACCCTTGAACATTTCTG+AGG | + | chr2_4:61939667-61939686 | None:intergenic | 40.0% | |
| CACTATATGAGGAACTCCTT+TGG | + | chr2_4:61940317-61940336 | None:intergenic | 40.0% | |
| TGTGCCAGTATCACTATATG+AGG | + | chr2_4:61940328-61940347 | None:intergenic | 40.0% | |
| TCGTGCAACTGAAACAATAG+AGG | - | chr2_4:61940353-61940372 | Msa0340590:intron | 40.0% | |
| GTGACTTCTGCTCTTAATAC+AGG | - | chr2_4:61940453-61940472 | Msa0340590:CDS | 40.0% | |
| !! | CTATCGTTGGTAGTTCCAAA+TGG | + | chr2_4:61940502-61940521 | None:intergenic | 40.0% |
| TTCAGTTGGGTTCTCTACAT+GGG | + | chr2_4:61940545-61940564 | None:intergenic | 40.0% | |
| ATTTCCGGACTTCTTCAGTT+GGG | + | chr2_4:61940558-61940577 | None:intergenic | 40.0% | |
| AAGTTCACAAAGGTTCTCTC+TGG | - | chr2_4:61940619-61940638 | Msa0340590:intron | 40.0% | |
| ATAACTGGAAGAGGTCACTT+AGG | + | chr2_4:61940728-61940747 | None:intergenic | 40.0% | |
| ACTGTAGGACGCATATAATC+TGG | + | chr2_4:61941273-61941292 | None:intergenic | 40.0% | |
| ATTATATGCGTCCTACAGTG+TGG | - | chr2_4:61941274-61941293 | Msa0340590:intron | 40.0% | |
| ! | GTCAACGTCATGATTTTCCA+TGG | - | chr2_4:61941564-61941583 | Msa0340590:CDS | 40.0% |
| GTGGCATAATTAAGGATACC+TGG | + | chr2_4:61941765-61941784 | None:intergenic | 40.0% | |
| ATTTCTGAACTTGTGGTTGC+TGG | + | chr2_4:61941892-61941911 | None:intergenic | 40.0% | |
| ACCACAAGTTCAGAAATCAC+TGG | - | chr2_4:61941895-61941914 | Msa0340590:intron | 40.0% | |
| TCCAGTGATTTCTGAACTTG+TGG | + | chr2_4:61941899-61941918 | None:intergenic | 40.0% | |
| TTACAGATGACCTGTTTGTC+AGG | - | chr2_4:61941942-61941961 | Msa0340590:intron | 40.0% | |
| TTCGAGTAAGATGGTTAGAC+AGG | - | chr2_4:61942034-61942053 | Msa0340590:intron | 40.0% | |
| TCGAGTAAGATGGTTAGACA+GGG | - | chr2_4:61942035-61942054 | Msa0340590:intron | 40.0% | |
| GTTAGACAGGGTTTATAAGG+CGG | - | chr2_4:61942047-61942066 | Msa0340590:intron | 40.0% | |
| TTAGACAGGGTTTATAAGGC+GGG | - | chr2_4:61942048-61942067 | Msa0340590:intron | 40.0% | |
| ! | TAGAAGCATGTAAGACAGTG+TGG | - | chr2_4:61942238-61942257 | Msa0340590:intron | 40.0% |
| GTTGCAATCTATGCTTGAGA+TGG | - | chr2_4:61942450-61942469 | Msa0340590:intron | 40.0% | |
| GCAAAAAATAGTCGACAAGG+AGG | + | chr2_4:61942506-61942525 | None:intergenic | 40.0% | |
| TGATAACCTCATCTTCTTCC+AGG | - | chr2_4:61942568-61942587 | Msa0340590:CDS | 40.0% | |
| GATAACCTCATCTTCTTCCA+GGG | - | chr2_4:61942569-61942588 | Msa0340590:CDS | 40.0% | |
| ! | TAGAAGGGAGCATAGATAAC+TGG | - | chr2_4:61942676-61942695 | Msa0340590:intron | 40.0% |
| CATTACACATTTGCTCAACC+AGG | - | chr2_4:61942789-61942808 | Msa0340590:intron | 40.0% | |
| TTGCTCAACCAGGAATTCAA+AGG | - | chr2_4:61942799-61942818 | Msa0340590:intron | 40.0% | |
| AAGACAAGCCTTTGAATTCC+TGG | + | chr2_4:61942810-61942829 | None:intergenic | 40.0% | |
| AAACAACAGGCCAGAGAAAA+AGG | + | chr2_4:61942869-61942888 | None:intergenic | 40.0% | |
| TACGGTGTGGTTGTTGAAAT+GGG | + | chr2_4:61942966-61942985 | None:intergenic | 40.0% | |
| ATACGGTGTGGTTGTTGAAA+TGG | + | chr2_4:61942967-61942986 | None:intergenic | 40.0% | |
| AACCACACCGTATGTCTATA+CGG | - | chr2_4:61942974-61942993 | Msa0340590:CDS | 40.0% | |
| CGTATGTCTATACGGTTTAG+TGG | - | chr2_4:61942982-61943001 | Msa0340590:CDS | 40.0% | |
| !!! | TCGTACAAGGGTGTCTATTT+TGG | - | chr2_4:61943083-61943102 | Msa0340590:intron | 40.0% |
| !!! | CGTACAAGGGTGTCTATTTT+GGG | - | chr2_4:61943084-61943103 | Msa0340590:intron | 40.0% |
| ! | TAACAGCCCTCTTTTGCATT+TGG | - | chr2_4:61943116-61943135 | Msa0340590:intron | 40.0% |
| ! | CCCTCTTTTGCATTTGGATT+TGG | - | chr2_4:61943122-61943141 | Msa0340590:intron | 40.0% |
| ! | ACTGCTTTCATGGTTTTCCA+TGG | - | chr2_4:61943352-61943371 | Msa0340590:intron | 40.0% |
| ATATGGCTTGAAACAGGATC+TGG | + | chr2_4:61943489-61943508 | None:intergenic | 40.0% | |
| AGATCCTGTTTCAAGCCATA+TGG | - | chr2_4:61943488-61943507 | Msa0340590:intron | 40.0% | |
| TTCTCCATATGGCTTGAAAC+AGG | + | chr2_4:61943495-61943514 | None:intergenic | 40.0% | |
| TTCAAGCCATATGGAGAATC+AGG | - | chr2_4:61943497-61943516 | Msa0340590:intron | 40.0% | |
| TCAAGCCATATGGAGAATCA+GGG | - | chr2_4:61943498-61943517 | Msa0340590:intron | 40.0% | |
| ! | TTCTTCAATTTGCTTTCCGC+TGG | - | chr2_4:61943529-61943548 | Msa0340590:intron | 40.0% |
| TTAGAAGACAGTTGAACCAG+CGG | + | chr2_4:61943548-61943567 | None:intergenic | 40.0% | |
| AAAAATCAGTGCAAACCTCG+CGG | + | chr2_4:61943572-61943591 | None:intergenic | 40.0% | |
| ATACACAAGGAAGTCAGGTA+AGG | + | chr2_4:61943798-61943817 | None:intergenic | 40.0% | |
| ACTCACCGTAAGAAGAAAAC+TGG | + | chr2_4:61943828-61943847 | None:intergenic | 40.0% | |
| GTTTACTGAAATCTACCAGC+CGG | + | chr2_4:61943953-61943972 | None:intergenic | 40.0% | |
| ! | AAAAAGGGTATGTGAGACTG+TGG | + | chr2_4:61944152-61944171 | None:intergenic | 40.0% |
| GCTAAACGGGACCAATAAAA+AGG | + | chr2_4:61944168-61944187 | None:intergenic | 40.0% | |
| CCAAAAAACGAACAAGGGTA+AGG | + | chr2_4:61944232-61944251 | None:intergenic | 40.0% | |
| !!! | CCTTACCCTTGTTCGTTTTT+TGG | - | chr2_4:61944229-61944248 | Msa0340590:intron | 40.0% |
| TACTCTCTCGTGCATTTATG+TGG | - | chr2_4:61944484-61944503 | Msa0340590:intron | 40.0% | |
| ATTTAGGCAGCTAAATGGCT+AGG | + | chr2_4:61944531-61944550 | None:intergenic | 40.0% | |
| TGAAGGGGAAAAAAGTAGGA+TGG | + | chr2_4:61944607-61944626 | None:intergenic | 40.0% | |
| ACACTGAAGGGGAAAAAAGT+AGG | + | chr2_4:61944611-61944630 | None:intergenic | 40.0% | |
| CTTGCAATGTCAACAACCAA+TGG | - | chr2_4:61944772-61944791 | Msa0340590:five_prime_UTR | 40.0% | |
| ! | GTGAAGTTTGGAGTGGTTGA+AGG | - | chr2_4:61939418-61939437 | Msa0340590:three_prime_UTR | 45.0% |
| ! | AGTTTGGAGTGGTTGAAGGA+AGG | - | chr2_4:61939422-61939441 | Msa0340590:three_prime_UTR | 45.0% |
| ATCTATCGGATCTACCCTCT+GGG | + | chr2_4:61940268-61940287 | None:intergenic | 45.0% | |
| TATCTATCGGATCTACCCTC+TGG | + | chr2_4:61940269-61940288 | None:intergenic | 45.0% | |
| GAGGAACTCCTTTGGTAAGT+TGG | + | chr2_4:61940309-61940328 | None:intergenic | 45.0% | |
| CACAATGGAAGCAAGCCATT+TGG | - | chr2_4:61940484-61940503 | Msa0340590:CDS | 45.0% | |
| CTTCAGTTGGGTTCTCTACA+TGG | + | chr2_4:61940546-61940565 | None:intergenic | 45.0% | |
| AGAACCCAACTGAAGAAGTC+CGG | - | chr2_4:61940551-61940570 | Msa0340590:intron | 45.0% | |
| GATTTCCGGACTTCTTCAGT+TGG | + | chr2_4:61940559-61940578 | None:intergenic | 45.0% | |
| AGAAGTCCGGAAATCTTCCA+TGG | - | chr2_4:61940564-61940583 | Msa0340590:intron | 45.0% | |
| GAAGTCCGGAAATCTTCCAT+GGG | - | chr2_4:61940565-61940584 | Msa0340590:intron | 45.0% | |
| TACCACCCATGGAAGATTTC+CGG | + | chr2_4:61940573-61940592 | None:intergenic | 45.0% | |
| !! | AAAGGTTCTCTCTGGAACCA+TGG | - | chr2_4:61940627-61940646 | Msa0340590:intron | 45.0% |
| ! | TTGCGTGAATTAGCTTGGAG+TGG | - | chr2_4:61941243-61941262 | Msa0340590:intron | 45.0% |
| AAGAGAAGTCTCCACACTGT+AGG | + | chr2_4:61941288-61941307 | None:intergenic | 45.0% | |
| TACAGTGTGGAGACTTCTCT+TGG | - | chr2_4:61941287-61941306 | Msa0340590:intron | 45.0% | |
| !!! | AGGGAGTTTTGAGAAGGAAG+CGG | - | chr2_4:61941659-61941678 | Msa0340590:intron | 45.0% |
| GCAACATCAGGTACAGTTCT+TGG | + | chr2_4:61941863-61941882 | None:intergenic | 45.0% | |
| TGCTGGAAGAATGCAACATC+AGG | + | chr2_4:61941875-61941894 | None:intergenic | 45.0% | |
| TGGAGCGTATTCTTTACGCA+TGG | - | chr2_4:61941915-61941934 | Msa0340590:intron | 45.0% | |
| TCCAGCAAGTGGATATGTTC+AGG | - | chr2_4:61942602-61942621 | Msa0340590:CDS | 45.0% | |
| CCAGCAAGTGGATATGTTCA+GGG | - | chr2_4:61942603-61942622 | Msa0340590:CDS | 45.0% | |
| CAGCAAGTGGATATGTTCAG+GGG | - | chr2_4:61942604-61942623 | Msa0340590:CDS | 45.0% | |
| ATGTAGAGGCTGACTGCTAT+TGG | - | chr2_4:61942733-61942752 | Msa0340590:intron | 45.0% | |
| AGTTGAAGGAATTGGTCAGG+AGG | - | chr2_4:61942832-61942851 | Msa0340590:intron | 45.0% | |
| GAATTGGTCAGGAGGATTGA+TGG | - | chr2_4:61942840-61942859 | Msa0340590:intron | 45.0% | |
| AACCGTATAGACATACGGTG+TGG | + | chr2_4:61942979-61942998 | None:intergenic | 45.0% | |
| !! | GAGAGCATTGATGAAGACTG+AGG | + | chr2_4:61943300-61943319 | None:intergenic | 45.0% |
| CAGCTAGATATGTGTCCCAA+AGG | + | chr2_4:61943766-61943785 | None:intergenic | 45.0% | |
| TGGGACACATATCTAGCTGA+AGG | - | chr2_4:61943767-61943786 | Msa0340590:intron | 45.0% | |
| ! | GACGGTACAAACGTTTTCTG+TGG | - | chr2_4:61943973-61943992 | Msa0340590:CDS | 45.0% |
| AGTGTTCAACTCAGATGGGA+TGG | - | chr2_4:61944039-61944058 | Msa0340590:intron | 45.0% | |
| TTGGTCCCGTTTAGCATGTT+AGG | - | chr2_4:61944173-61944192 | Msa0340590:intron | 45.0% | |
| !! | TCTGAGTTGGAAGGTGTTGA+AGG | + | chr2_4:61944437-61944456 | None:intergenic | 45.0% |
| AACACCTTCCAACTCAGAAC+TGG | - | chr2_4:61944439-61944458 | Msa0340590:intron | 45.0% | |
| !! | TGATCAGTCCAGTTCTGAGT+TGG | + | chr2_4:61944450-61944469 | None:intergenic | 45.0% |
| AACTCAGAACTGGACTGATC+AGG | - | chr2_4:61944449-61944468 | Msa0340590:intron | 45.0% | |
| ! | GAGGCATTTAGGCAGCTAAA+TGG | + | chr2_4:61944536-61944555 | None:intergenic | 45.0% |
| !! | GGAATTCAGCAGAGGCATTT+AGG | + | chr2_4:61944547-61944566 | None:intergenic | 45.0% |
| !!! | CTTTTTTCCCCTTCAGTGTG+TGG | - | chr2_4:61944612-61944631 | Msa0340590:CDS | 45.0% |
| AACAAGCACCACACACTGAA+GGG | + | chr2_4:61944623-61944642 | None:intergenic | 45.0% | |
| AAACAAGCACCACACACTGA+AGG | + | chr2_4:61944624-61944643 | None:intergenic | 45.0% | |
| CTAAAGGGTCGTAGCATTCC+TGG | - | chr2_4:61940228-61940247 | Msa0340590:intron | 50.0% | |
| AGTTGGGTTCTCTACATGGG+AGG | + | chr2_4:61940542-61940561 | None:intergenic | 50.0% | |
| GGAAATCTTCCATGGGTGGT+AGG | - | chr2_4:61940572-61940591 | Msa0340590:intron | 50.0% | |
| ATCAGTAGTCCTACCACCCA+TGG | + | chr2_4:61940584-61940603 | None:intergenic | 50.0% | |
| !!! | GAAGGGAGGGAGTTTTGAGA+AGG | - | chr2_4:61941653-61941672 | Msa0340590:intron | 50.0% |
| ! | GCAGTTTAGAGCCATGACGT+AGG | - | chr2_4:61942333-61942352 | Msa0340590:CDS | 50.0% |
| AATGGCCCTGGAAGAAGATG+AGG | + | chr2_4:61942577-61942596 | None:intergenic | 50.0% | |
| CATCTTCTTCCAGGGCCATT+CGG | - | chr2_4:61942577-61942596 | Msa0340590:CDS | 50.0% | |
| CCCTGAACATATCCACTTGC+TGG | + | chr2_4:61942606-61942625 | None:intergenic | 50.0% | |
| CCAGTCCCTGATTCTCCATA+TGG | + | chr2_4:61943506-61943525 | None:intergenic | 50.0% | |
| CCATATGGAGAATCAGGGAC+TGG | - | chr2_4:61943503-61943522 | Msa0340590:intron | 50.0% | |
| CAACTGTCTTCTAATCCGCG+AGG | - | chr2_4:61943554-61943573 | Msa0340590:intron | 50.0% | |
| AGGCGTGTGACAAGATGGAA+GGG | + | chr2_4:61943746-61943765 | None:intergenic | 50.0% | |
| AAGGCGTGTGACAAGATGGA+AGG | + | chr2_4:61943747-61943766 | None:intergenic | 50.0% | |
| TCCATCTTGTCACACGCCTT+TGG | - | chr2_4:61943747-61943766 | Msa0340590:CDS | 50.0% | |
| CCATCTTGTCACACGCCTTT+GGG | - | chr2_4:61943748-61943767 | Msa0340590:CDS | 50.0% | |
| TTGTCAATATGTGCCCCCTC+CGG | - | chr2_4:61943931-61943950 | Msa0340590:CDS | 50.0% | |
| ACTGAAATCTACCAGCCGGA+GGG | + | chr2_4:61943949-61943968 | None:intergenic | 50.0% | |
| TACTGAAATCTACCAGCCGG+AGG | + | chr2_4:61943950-61943969 | None:intergenic | 50.0% | |
| TCAGATGGGATGGATGCATG+TGG | - | chr2_4:61944049-61944068 | Msa0340590:intron | 50.0% | |
| !! | CAGTCCAGTTCTGAGTTGGA+AGG | + | chr2_4:61944446-61944465 | None:intergenic | 50.0% |
| GAACTGGACTGATCAGGAAC+TGG | - | chr2_4:61944455-61944474 | Msa0340590:intron | 50.0% | |
| GACTGATCAGGAACTGGAGA+TGG | - | chr2_4:61944461-61944480 | Msa0340590:intron | 50.0% | |
| ACAAGCACCACACACTGAAG+GGG | + | chr2_4:61944622-61944641 | None:intergenic | 50.0% | |
| GTCCGGAAATCTTCCATGGG+TGG | - | chr2_4:61940568-61940587 | Msa0340590:intron | 55.0% | |
| TCGTCTGAGCGTTCCGTATC+AGG | + | chr2_4:61941724-61941743 | None:intergenic | 55.0% | |
| TGAGATCAGCATGCTTCGCC+AGG | - | chr2_4:61941744-61941763 | Msa0340590:intron | 55.0% | |
| !! | CATGGCTCTAAACTGCCGCT+AGG | + | chr2_4:61942329-61942348 | None:intergenic | 55.0% |
| ! | TCCACTTGCTGGATGCCGAA+TGG | + | chr2_4:61942595-61942614 | None:intergenic | 55.0% |
| ! | CCCAAAGGCGTGTGACAAGA+TGG | + | chr2_4:61943751-61943770 | None:intergenic | 55.0% |
| TGAAATCTACCAGCCGGAGG+GGG | + | chr2_4:61943947-61943966 | None:intergenic | 55.0% | |
| CTGAAATCTACCAGCCGGAG+GGG | + | chr2_4:61943948-61943967 | None:intergenic | 55.0% | |
| GCCATTCGGCATCCAGCAAG+TGG | - | chr2_4:61942591-61942610 | Msa0340590:CDS | 60.0% | |
| TGCTGGATGCCGAATGGCCC+TGG | + | chr2_4:61942589-61942608 | None:intergenic | 65.0% | |
| CAATATGTGCCCCCTCCGGC+TGG | - | chr2_4:61943935-61943954 | Msa0340590:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 61939376 | 61944879 | 61939376 | ID=Msa0340590;Name=Msa0340590 |
| chr2_4 | mRNA | 61939376 | 61944879 | 61939376 | ID=Msa0340590-mRNA-1;Parent=Msa0340590;Name=Msa0340590-mRNA-1;_AED=0.12;_eAED=0.12;_QI=214|1|1|1|1|1|10|331|449 |
| chr2_4 | exon | 61939376 | 61939868 | 61939376 | ID=Msa0340590-mRNA-1:exon:19646;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61940414 | 61940515 | 61940414 | ID=Msa0340590-mRNA-1:exon:19645;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61940680 | 61940765 | 61940680 | ID=Msa0340590-mRNA-1:exon:19644;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61941394 | 61941665 | 61941394 | ID=Msa0340590-mRNA-1:exon:19643;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61942319 | 61942410 | 61942319 | ID=Msa0340590-mRNA-1:exon:19642;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61942490 | 61942627 | 61942490 | ID=Msa0340590-mRNA-1:exon:19641;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61942947 | 61943017 | 61942947 | ID=Msa0340590-mRNA-1:exon:19640;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61943597 | 61943780 | 61943597 | ID=Msa0340590-mRNA-1:exon:19639;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61943881 | 61944031 | 61943881 | ID=Msa0340590-mRNA-1:exon:19638;Parent=Msa0340590-mRNA-1 |
| chr2_4 | exon | 61944574 | 61944879 | 61944574 | ID=Msa0340590-mRNA-1:exon:19637;Parent=Msa0340590-mRNA-1 |
| chr2_4 | five_prime_UTR | 61944666 | 61944879 | 61944666 | ID=Msa0340590-mRNA-1:five_prime_utr;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61944574 | 61944665 | 61944574 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61943881 | 61944031 | 61943881 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61943597 | 61943780 | 61943597 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61942947 | 61943017 | 61942947 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61942490 | 61942627 | 61942490 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61942319 | 61942410 | 61942319 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61941394 | 61941665 | 61941394 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61940680 | 61940765 | 61940680 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61940414 | 61940515 | 61940414 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | CDS | 61939707 | 61939868 | 61939707 | ID=Msa0340590-mRNA-1:cds;Parent=Msa0340590-mRNA-1 |
| chr2_4 | three_prime_UTR | 61939376 | 61939706 | 61939376 | ID=Msa0340590-mRNA-1:three_prime_utr;Parent=Msa0340590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
