Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265170 | XP_003597541.1 | 97.321 | 448 | 12 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265170 | sp|Q9NU19|TB22B_HUMAN | 51.852 | 324 | 152 | 2 | 123 | 445 | 182 | 502 | 5.26e-117 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265170 | G7IS12 | 97.321 | 448 | 12 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223930 | Msa0265170 | 0.899386 | 2.086938e-77 | -8.615850e-47 |
| Msa0265170 | Msa0340590 | 0.860146 | 2.530982e-63 | -8.615850e-47 |
| Msa0265170 | Msa1144620 | 0.801944 | 7.089173e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265170 | MtrunA17_Chr2g0329691 | 97.321 | 448 | 12 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
| Msa0265170 | MtrunA17_Chr4g0033831 | 79.680 | 438 | 87 | 1 | 13 | 448 | 18 | 455 | 0.0 | 727 |
| Msa0265170 | MtrunA17_Chr3g0121451 | 26.608 | 342 | 182 | 9 | 134 | 419 | 88 | 416 | 4.54e-24 | 103 |
| Msa0265170 | MtrunA17_Chr8g0378291 | 26.608 | 342 | 182 | 8 | 134 | 419 | 99 | 427 | 4.16e-21 | 95.5 |
| Msa0265170 | MtrunA17_Chr4g0063771 | 30.172 | 232 | 135 | 6 | 211 | 432 | 80 | 294 | 3.00e-20 | 90.9 |
| Msa0265170 | MtrunA17_Chr6g0456341 | 25.449 | 334 | 174 | 11 | 107 | 416 | 31 | 313 | 8.26e-18 | 84.7 |
| Msa0265170 | MtrunA17_Chr5g0448071 | 25.523 | 239 | 134 | 5 | 144 | 378 | 106 | 304 | 7.86e-16 | 79.0 |
| Msa0265170 | MtrunA17_Chr1g0183581 | 26.103 | 272 | 142 | 11 | 136 | 372 | 60 | 307 | 9.45e-16 | 79.0 |
| Msa0265170 | MtrunA17_Chr4g0064141 | 24.662 | 296 | 176 | 11 | 136 | 415 | 350 | 614 | 3.26e-15 | 78.2 |
| Msa0265170 | MtrunA17_Chr2g0329651 | 26.818 | 220 | 117 | 6 | 202 | 416 | 361 | 541 | 1.61e-14 | 75.9 |
| Msa0265170 | MtrunA17_Chr1g0181831 | 25.000 | 264 | 149 | 10 | 147 | 398 | 298 | 524 | 6.69e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265170 | AT2G30710.1 | 76.334 | 431 | 99 | 2 | 18 | 448 | 13 | 440 | 0.0 | 694 |
| Msa0265170 | AT1G04830.1 | 26.835 | 436 | 236 | 12 | 52 | 419 | 11 | 431 | 1.13e-28 | 117 |
| Msa0265170 | AT1G04830.2 | 26.835 | 436 | 236 | 12 | 52 | 419 | 11 | 431 | 1.74e-28 | 117 |
| Msa0265170 | AT4G13730.3 | 25.146 | 342 | 198 | 6 | 123 | 419 | 96 | 424 | 1.25e-22 | 100 |
| Msa0265170 | AT4G13730.1 | 24.646 | 353 | 197 | 7 | 123 | 419 | 96 | 435 | 2.16e-20 | 93.6 |
| Msa0265170 | AT3G02460.1 | 26.277 | 274 | 147 | 8 | 151 | 416 | 88 | 314 | 4.41e-18 | 85.9 |
| Msa0265170 | AT3G02460.3 | 26.277 | 274 | 147 | 8 | 151 | 416 | 88 | 314 | 6.87e-18 | 85.1 |
| Msa0265170 | AT1G04830.3 | 25.187 | 401 | 244 | 11 | 52 | 419 | 11 | 388 | 1.31e-17 | 85.1 |
| Msa0265170 | AT5G15930.1 | 25.182 | 274 | 152 | 7 | 150 | 416 | 84 | 311 | 1.35e-17 | 84.3 |
| Msa0265170 | AT4G13730.2 | 24.545 | 330 | 176 | 8 | 123 | 396 | 96 | 408 | 1.50e-17 | 84.7 |
| Msa0265170 | AT3G07890.1 | 26.667 | 240 | 130 | 7 | 144 | 378 | 109 | 307 | 1.01e-16 | 82.0 |
| Msa0265170 | AT3G07890.4 | 26.667 | 240 | 130 | 7 | 144 | 378 | 109 | 307 | 1.01e-16 | 82.0 |
| Msa0265170 | AT3G07890.5 | 26.667 | 240 | 130 | 7 | 144 | 378 | 109 | 307 | 1.01e-16 | 82.0 |
| Msa0265170 | AT3G07890.2 | 26.667 | 240 | 130 | 7 | 144 | 378 | 109 | 307 | 1.01e-16 | 82.0 |
| Msa0265170 | AT3G07890.3 | 26.667 | 240 | 130 | 7 | 144 | 378 | 109 | 307 | 1.01e-16 | 82.0 |
| Msa0265170 | AT2G43490.4 | 30.178 | 169 | 94 | 3 | 209 | 376 | 359 | 504 | 1.22e-15 | 80.1 |
| Msa0265170 | AT2G43490.1 | 30.178 | 169 | 94 | 3 | 209 | 376 | 359 | 504 | 1.22e-15 | 80.1 |
| Msa0265170 | AT2G43490.7 | 30.178 | 169 | 94 | 3 | 209 | 376 | 359 | 504 | 1.22e-15 | 80.1 |
| Msa0265170 | AT2G43490.3 | 30.178 | 169 | 94 | 3 | 209 | 376 | 359 | 504 | 1.22e-15 | 80.1 |
| Msa0265170 | AT2G43490.2 | 30.178 | 169 | 94 | 3 | 209 | 376 | 359 | 504 | 1.22e-15 | 80.1 |
| Msa0265170 | AT2G43490.5 | 30.178 | 169 | 94 | 3 | 209 | 376 | 359 | 504 | 1.25e-15 | 79.7 |
| Msa0265170 | AT2G43490.6 | 30.178 | 169 | 94 | 3 | 209 | 376 | 355 | 500 | 1.28e-15 | 79.7 |
| Msa0265170 | AT2G43490.8 | 30.178 | 169 | 94 | 3 | 209 | 376 | 355 | 500 | 1.28e-15 | 79.7 |
| Msa0265170 | AT3G02460.4 | 25.957 | 235 | 124 | 6 | 151 | 378 | 88 | 279 | 2.29e-15 | 77.0 |
| Msa0265170 | AT5G52580.1 | 25.210 | 357 | 218 | 13 | 79 | 415 | 295 | 622 | 4.00e-15 | 78.2 |
| Msa0265170 | AT3G59570.2 | 31.361 | 169 | 92 | 4 | 209 | 376 | 363 | 508 | 4.38e-15 | 78.2 |
| Msa0265170 | AT5G52580.3 | 24.930 | 357 | 219 | 13 | 79 | 415 | 301 | 628 | 4.85e-15 | 77.8 |
| Msa0265170 | AT3G59570.3 | 31.361 | 169 | 92 | 4 | 209 | 376 | 363 | 508 | 5.93e-15 | 77.8 |
| Msa0265170 | AT3G59570.1 | 31.361 | 169 | 92 | 4 | 209 | 376 | 363 | 508 | 6.41e-15 | 77.8 |
| Msa0265170 | AT3G02460.5 | 25.641 | 234 | 124 | 6 | 151 | 377 | 88 | 278 | 9.29e-15 | 75.1 |
| Msa0265170 | AT3G02460.2 | 24.900 | 249 | 137 | 6 | 151 | 392 | 88 | 293 | 9.51e-15 | 75.5 |
| Msa0265170 | AT5G52580.2 | 25.497 | 302 | 180 | 11 | 130 | 415 | 367 | 639 | 3.35e-14 | 75.5 |
| Msa0265170 | AT2G37290.3 | 25.658 | 304 | 176 | 9 | 85 | 379 | 248 | 510 | 5.12e-14 | 75.1 |
| Msa0265170 | AT2G37290.1 | 25.658 | 304 | 176 | 9 | 85 | 379 | 248 | 510 | 5.30e-14 | 75.1 |
| Msa0265170 | AT4G28550.3 | 25.581 | 172 | 101 | 4 | 208 | 376 | 166 | 313 | 4.27e-11 | 64.7 |
Find 137 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAAGATGTTTGTGAATT+TGG | 0.165423 | 2_2:+65408684 | Msa0265170:five_prime_UTR |
| TCGTCTGAGCGTTCCGTATC+AGG | 0.228799 | 2_2:-65410958 | None:intergenic |
| CCATCTTGTCACACGCCTTT+GGG | 0.282740 | 2_2:+65412985 | Msa0265170:CDS |
| TCCATCTTGTCACACGCCTT+TGG | 0.286854 | 2_2:+65412984 | Msa0265170:CDS |
| AAGACAAGCCTTTGAATTCC+TGG | 0.289816 | 2_2:-65412044 | None:intergenic |
| TACCACCCATGGAAGATTTC+CGG | 0.302895 | 2_2:-65409808 | None:intergenic |
| GGAATTCAGCAGAGGCATTT+AGG | 0.303007 | 2_2:-65413781 | None:intergenic |
| TCTGGAACCATGGTTATATT+AGG | 0.309896 | 2_2:+65409875 | Msa0265170:CDS |
| GTTGTCGTTGTTGTTGTTCA+TGG | 0.311263 | 2_2:-65408824 | None:intergenic |
| CTTGAACATTTCTGAGGGTT+TGG | 0.311920 | 2_2:-65408891 | None:intergenic |
| TTCCTATCAGAATACTTAGA+AGG | 0.315927 | 2_2:+65411897 | Msa0265170:CDS |
| CACCAACTAATTCAGATAGA+AGG | 0.337858 | 2_2:+65410872 | Msa0265170:CDS |
| TTCAAGCCATATGGAGAATC+AGG | 0.344007 | 2_2:+65412734 | Msa0265170:CDS |
| AAGAAAAGAAAAGTGAAGTT+TGG | 0.349008 | 2_2:+65408647 | Msa0265170:five_prime_UTR |
| CCCTGAACATATCCACTTGC+TGG | 0.349458 | 2_2:-65411840 | None:intergenic |
| GGTAGATCCGATAGATAATT+CGG | 0.350997 | 2_2:+65409510 | Msa0265170:CDS |
| CTTCAGTTGGGTTCTCTACA+TGG | 0.352778 | 2_2:-65409781 | None:intergenic |
| TGTCTTTAAGTTGAAGGAAT+TGG | 0.360423 | 2_2:+65412061 | Msa0265170:CDS |
| TGATATGTTGGAATTTGATT+TGG | 0.362090 | 2_2:-65408800 | None:intergenic |
| CCAGTCCCTGATTCTCCATA+TGG | 0.362525 | 2_2:-65412740 | None:intergenic |
| ATTTCTGAACTTGTGGTTGC+TGG | 0.363338 | 2_2:-65411126 | None:intergenic |
| GCAACATCAGGTACAGTTCT+TGG | 0.375969 | 2_2:-65411097 | None:intergenic |
| CTAAAGGGTCGTAGCATTCC+TGG | 0.383114 | 2_2:+65409466 | Msa0265170:CDS |
| AACAAGCACCACACACTAAA+GGG | 0.384849 | 2_2:-65413857 | None:intergenic |
| TCCAGCAAGTGGATATGTTC+AGG | 0.385704 | 2_2:+65411839 | Msa0265170:CDS |
| GTTGTTCATGGTTGATATGT+TGG | 0.393129 | 2_2:-65408812 | None:intergenic |
| GAGGCATTTAGGCAGCTAAA+TGG | 0.395459 | 2_2:-65413770 | None:intergenic |
| AAGGCTTGTCTTTAAGTTGA+AGG | 0.402702 | 2_2:+65412055 | Msa0265170:CDS |
| GAATTGGTCAGGAGGATTGA+TGG | 0.404086 | 2_2:+65412077 | Msa0265170:CDS |
| CACAATGGAAGCAAGCCATT+TGG | 0.405862 | 2_2:+65409722 | Msa0265170:CDS |
| AGTTCCTCATATAGTGATAC+TGG | 0.414241 | 2_2:+65409559 | Msa0265170:CDS |
| AACACCTTCCAACTCAGAAC+TGG | 0.415204 | 2_2:+65413676 | Msa0265170:CDS |
| TTCTTTGTCAAGGTTACTAA+AGG | 0.415801 | 2_2:+65409450 | Msa0265170:intron |
| TCCCTTCTATCTGAATTAGT+TGG | 0.425652 | 2_2:-65410874 | None:intergenic |
| TTCTTCAATTTGCTTTCCGC+TGG | 0.426482 | 2_2:+65412766 | Msa0265170:CDS |
| TAGAAGGGAGCATAGATAAC+TGG | 0.429552 | 2_2:+65411913 | Msa0265170:CDS |
| GTGAAGTTTGGAGTGGTTGA+AGG | 0.434199 | 2_2:+65408659 | Msa0265170:five_prime_UTR |
| TGCTTGTCAAAATTGCTTGA+TGG | 0.434811 | 2_2:+65411993 | Msa0265170:CDS |
| AATATATACACAAGGAAGTC+AGG | 0.439682 | 2_2:-65413037 | None:intergenic |
| ACTCACCGTAAGAAGAAAAC+TGG | 0.439969 | 2_2:-65413062 | None:intergenic |
| TTCTCCATATGGCTTGAAAC+AGG | 0.439984 | 2_2:-65412729 | None:intergenic |
| TATCTATCGGATCTACCCTC+TGG | 0.446012 | 2_2:-65409504 | None:intergenic |
| TTAAGTTGAAGGAATTGGTC+AGG | 0.452027 | 2_2:+65412066 | Msa0265170:CDS |
| ACTGTAGGACGCATATAATC+TGG | 0.454179 | 2_2:-65410507 | None:intergenic |
| AGATCCTGTTTCAAGCCATA+TGG | 0.461315 | 2_2:+65412725 | Msa0265170:intron |
| TCTGAGTTGGAAGGTGTTGA+AGG | 0.469826 | 2_2:-65413671 | None:intergenic |
| TGCAATGTAATATCTTGTAA+AGG | 0.470702 | 2_2:+65413929 | Msa0265170:three_prime_UTR |
| CTATCGTTGGTAGTTCCAAA+TGG | 0.472101 | 2_2:-65409737 | None:intergenic |
| AACTGAAAATTAACTCCCAT+TGG | 0.475238 | 2_2:-65414024 | None:intergenic |
| AACTCAGAACTGGACTGATC+AGG | 0.476523 | 2_2:+65413686 | Msa0265170:CDS |
| TCTTTGTCAAGGTTACTAAA+GGG | 0.477125 | 2_2:+65409451 | Msa0265170:intron |
| CACTATATGAGGAACTCCTT+TGG | 0.478396 | 2_2:-65409552 | None:intergenic |
| GAGGAACTCCTTTGGTAAGT+TGG | 0.479046 | 2_2:-65409544 | None:intergenic |
| ATAAATTGCGTGAATTAGCT+TGG | 0.481343 | 2_2:+65410475 | Msa0265170:CDS |
| CATCTTCTTCCAGGGCCATT+CGG | 0.484264 | 2_2:+65411814 | Msa0265170:intron |
| TTCAGTTGGGTTCTCTACAT+GGG | 0.488921 | 2_2:-65409780 | None:intergenic |
| ATTTCCGGACTTCTTCAGTT+GGG | 0.489184 | 2_2:-65409793 | None:intergenic |
| AAGTTCACAAAGGTTCTCTC+TGG | 0.491096 | 2_2:+65409857 | Msa0265170:CDS |
| TTGCAAAATACAAGTAAGAA+TGG | 0.496112 | 2_2:-65413911 | None:intergenic |
| CCCAAAGGCGTGTGACAAGA+TGG | 0.496262 | 2_2:-65412985 | None:intergenic |
| TTTGGTTGAATCGAGAATCA+AGG | 0.499333 | 2_2:-65408873 | None:intergenic |
| TCCTATCAGAATACTTAGAA+GGG | 0.501199 | 2_2:+65411898 | Msa0265170:CDS |
| TGTGCCAGTATCACTATATG+AGG | 0.509178 | 2_2:-65409563 | None:intergenic |
| TCCAGTGATTTCTGAACTTG+TGG | 0.509701 | 2_2:-65411133 | None:intergenic |
| AGTAGGATGGAATGAGGAAA+AGG | 0.510042 | 2_2:-65413828 | None:intergenic |
| AAACAAGCACCACACACTAA+AGG | 0.510138 | 2_2:-65413858 | None:intergenic |
| GTAGATCCGATAGATAATTC+GGG | 0.510981 | 2_2:+65409511 | Msa0265170:CDS |
| TGATCAGTCCAGTTCTGAGT+TGG | 0.511650 | 2_2:-65413684 | None:intergenic |
| GATTTCCGGACTTCTTCAGT+TGG | 0.513734 | 2_2:-65409794 | None:intergenic |
| TGAGATCAGCATGCTTCGCC+AGG | 0.514763 | 2_2:+65410981 | Msa0265170:CDS |
| ATGTAGAGGCTGACTGCTAT+TGG | 0.515608 | 2_2:+65411970 | Msa0265170:CDS |
| TCAGTTATTGATGATTTGGA+TGG | 0.516262 | 2_2:+65414041 | Msa0265170:three_prime_UTR |
| GTATTATGATATTCCTGATA+CGG | 0.517822 | 2_2:+65410945 | Msa0265170:CDS |
| CCAGCAAGTGGATATGTTCA+GGG | 0.518965 | 2_2:+65411840 | Msa0265170:CDS |
| TGCTGGAAGAATGCAACATC+AGG | 0.522302 | 2_2:-65411109 | None:intergenic |
| TCCCTTCTAAGTATTCTGAT+AGG | 0.522873 | 2_2:-65411899 | None:intergenic |
| TACAGTGTGGAGACTTCTCT+TGG | 0.524492 | 2_2:+65410524 | Msa0265170:CDS |
| CAAACCCTCAGAAATGTTCA+AGG | 0.526816 | 2_2:+65408892 | Msa0265170:CDS |
| AGTTTGGAGTGGTTGAAGGA+AGG | 0.526855 | 2_2:+65408663 | Msa0265170:five_prime_UTR |
| AGAACCCAACTGAAGAAGTC+CGG | 0.535528 | 2_2:+65409789 | Msa0265170:CDS |
| AATACCCTTGAACATTTCTG+AGG | 0.537211 | 2_2:-65408897 | None:intergenic |
| TCGAGAATCAAGGATTCCTA+TGG | 0.544935 | 2_2:-65408863 | None:intergenic |
| ATCTATCGGATCTACCCTCT+GGG | 0.548642 | 2_2:-65409503 | None:intergenic |
| CTTGCAATGTCAACAACCAA+TGG | 0.553374 | 2_2:+65414008 | Msa0265170:three_prime_UTR |
| ATCAGTAGTCCTACCACCCA+TGG | 0.554168 | 2_2:-65409819 | None:intergenic |
| AGAAGTCCGGAAATCTTCCA+TGG | 0.554526 | 2_2:+65409802 | Msa0265170:CDS |
| TTGCAATGTCAACAACCAAT+GGG | 0.554729 | 2_2:+65414009 | Msa0265170:three_prime_UTR |
| TTGCTCAACCAGGAATTCAA+AGG | 0.558227 | 2_2:+65412036 | Msa0265170:CDS |
| TACTCTCTCGTGCATTTATG+TGG | 0.564315 | 2_2:+65413721 | Msa0265170:CDS |
| CATTACACATTTGCTCAACC+AGG | 0.564692 | 2_2:+65412026 | Msa0265170:CDS |
| AAAGGTTCTCTCTGGAACCA+TGG | 0.569589 | 2_2:+65409865 | Msa0265170:CDS |
| AGTTGGGTTCTCTACATGGG+AGG | 0.571413 | 2_2:-65409777 | None:intergenic |
| ATACCCTTGAACATTTCTGA+GGG | 0.572391 | 2_2:-65408896 | None:intergenic |
| ACCAACTAATTCAGATAGAA+GGG | 0.572533 | 2_2:+65410873 | Msa0265170:CDS |
| GCCATTCGGCATCCAGCAAG+TGG | 0.577019 | 2_2:+65411828 | Msa0265170:CDS |
| CCATATGGAGAATCAGGGAC+TGG | 0.579566 | 2_2:+65412740 | Msa0265170:CDS |
| TGTAATATCTTGTAAAGGAG+AGG | 0.580056 | 2_2:+65413934 | Msa0265170:three_prime_UTR |
| ATACACAAGGAAGTCAGGTA+AGG | 0.582696 | 2_2:-65413032 | None:intergenic |
| TCGTGCAACTGAAACAATAG+AGG | 0.583962 | 2_2:+65409591 | Msa0265170:CDS |
| GTAAAATCTTATTGACCCAG+AGG | 0.584370 | 2_2:+65409488 | Msa0265170:CDS |
| TACAGTTCTTGGACAATCAA+CGG | 0.584447 | 2_2:-65411086 | None:intergenic |
| ATTTAGGCAGCTAAATGGCT+AGG | 0.588967 | 2_2:-65413765 | None:intergenic |
| AGTTGAAGGAATTGGTCAGG+AGG | 0.592078 | 2_2:+65412069 | Msa0265170:CDS |
| AACAAAGACACTAGTACCAT+AGG | 0.592221 | 2_2:+65408847 | Msa0265170:CDS |
| AAGGCGTGTGACAAGATGGA+AGG | 0.595513 | 2_2:-65412981 | None:intergenic |
| GGAAATCTTCCATGGGTGGT+AGG | 0.596520 | 2_2:+65409810 | Msa0265170:CDS |
| TCCACTTGCTGGATGCCGAA+TGG | 0.597438 | 2_2:-65411829 | None:intergenic |
| ACCACAAGTTCAGAAATCAC+TGG | 0.601882 | 2_2:+65411132 | Msa0265170:CDS |
| TATAAGCCCGAATTATCTAT+CGG | 0.604731 | 2_2:-65409517 | None:intergenic |
| AAGAAAAGTGAAGTTTGGAG+TGG | 0.605523 | 2_2:+65408652 | Msa0265170:five_prime_UTR |
| GACTGATCAGGAACTCGAGA+TGG | 0.605616 | 2_2:+65413698 | Msa0265170:CDS |
| TGGGACACATATCTAGCTGA+AGG | 0.612669 | 2_2:+65413004 | Msa0265170:CDS |
| ACTAATTCAGATAGAAGGGA+GGG | 0.621364 | 2_2:+65410877 | Msa0265170:CDS |
| CAGTCCAGTTCTGAGTTGGA+AGG | 0.623870 | 2_2:-65413680 | None:intergenic |
| CAGCTAGATATGTGTCCCAA+AGG | 0.627022 | 2_2:-65413000 | None:intergenic |
| AGATAAAATCTCTAATGTAG+AGG | 0.630211 | 2_2:+65411956 | Msa0265170:CDS |
| TCAAGCCATATGGAGAATCA+GGG | 0.631147 | 2_2:+65412735 | Msa0265170:CDS |
| GTCCGGAAATCTTCCATGGG+TGG | 0.634104 | 2_2:+65409806 | Msa0265170:CDS |
| AGGCGTGTGACAAGATGGAA+GGG | 0.635093 | 2_2:-65412980 | None:intergenic |
| GAAGTCCGGAAATCTTCCAT+GGG | 0.635178 | 2_2:+65409803 | Msa0265170:CDS |
| AAGTATACCTAATATAACCA+TGG | 0.637927 | 2_2:-65409882 | None:intergenic |
| ACAAGCACCACACACTAAAG+GGG | 0.638528 | 2_2:-65413856 | None:intergenic |
| TAAAATCTTATTGACCCAGA+GGG | 0.642301 | 2_2:+65409489 | Msa0265170:CDS |
| AACTAATTCAGATAGAAGGG+AGG | 0.643726 | 2_2:+65410876 | Msa0265170:CDS |
| AAACCCTCAGAAATGTTCAA+GGG | 0.645133 | 2_2:+65408893 | Msa0265170:CDS |
| AAGAGAAGTCTCCACACTGT+AGG | 0.654955 | 2_2:-65410522 | None:intergenic |
| TGGAGCGTATTCTTTACGCA+TGG | 0.656098 | 2_2:+65411152 | Msa0265170:CDS |
| TATACTCACCAACTTACCAA+AGG | 0.657656 | 2_2:+65409536 | Msa0265170:CDS |
| CAGCAAGTGGATATGTTCAG+GGG | 0.660340 | 2_2:+65411841 | Msa0265170:CDS |
| AAGAGTTATGAAGTTCACAA+AGG | 0.667469 | 2_2:+65409847 | Msa0265170:CDS |
| ATTATATGCGTCCTACAGTG+TGG | 0.667641 | 2_2:+65410511 | Msa0265170:CDS |
| AACTGGCAAATATATACACA+AGG | 0.671598 | 2_2:-65413045 | None:intergenic |
| TAAATACAGGAATTCAGCAG+AGG | 0.673718 | 2_2:-65413789 | None:intergenic |
| TTGCGTGAATTAGCTTGGAG+TGG | 0.688224 | 2_2:+65410480 | Msa0265170:CDS |
| TTAGAAGACAGTTGAACCAG+CGG | 0.695324 | 2_2:-65412782 | None:intergenic |
| ATACAGGAAGAAGTTCACAA+TGG | 0.706853 | 2_2:+65409707 | Msa0265170:intron |
| CAACTGTCTTCTAATCCGCG+AGG | 0.710013 | 2_2:+65412791 | Msa0265170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATCAACTTTTTTAAT+GGG | - | chr2_2:65409075-65409094 | None:intergenic | 10.0% |
| !!! | AAAAAAATCAACTTTTTTAA+TGG | - | chr2_2:65409076-65409095 | None:intergenic | 10.0% |
| !! | AAACTAAATAAATATTATTC+AGG | - | chr2_2:65410393-65410412 | None:intergenic | 10.0% |
| !!! | ATTTTGAAAAAGAATAATTA+GGG | + | chr2_2:65410742-65410761 | Msa0265170:intron | 10.0% |
| !! | AAACTTAAACAAAAAGAAAA+AGG | + | chr2_2:65408618-65408637 | Msa0265170:five_prime_UTR | 15.0% |
| !!! | GAAAAGATAATATTTTTACA+AGG | - | chr2_2:65408950-65408969 | None:intergenic | 15.0% |
| !! | AAACAAAACAAATTACTAAT+TGG | - | chr2_2:65409375-65409394 | None:intergenic | 15.0% |
| !!! | ATTTTACTATTCATATTTTG+TGG | + | chr2_2:65409616-65409635 | Msa0265170:intron | 15.0% |
| !! | AAATATCAAGTTATTTAGAA+TGG | - | chr2_2:65410041-65410060 | None:intergenic | 15.0% |
| !! | ATATCTAAACAAATTATTGA+GGG | + | chr2_2:65410641-65410660 | Msa0265170:intron | 15.0% |
| !!! | GATTTTGAAAAAGAATAATT+AGG | + | chr2_2:65410741-65410760 | Msa0265170:intron | 15.0% |
| !!! | TTTTGAAAAAGAATAATTAG+GGG | + | chr2_2:65410743-65410762 | Msa0265170:intron | 15.0% |
| !! | ACTAGAATGAAAATAATATA+AGG | - | chr2_2:65411205-65411224 | None:intergenic | 15.0% |
| !! | AAATGTATGTTTATATATCA+TGG | + | chr2_2:65411768-65411787 | Msa0265170:intron | 15.0% |
| !! | AACAACACTATAATTAATAA+AGG | + | chr2_2:65412861-65412880 | Msa0265170:intron | 15.0% |
| !! | ACAACACTATAATTAATAAA+GGG | + | chr2_2:65412862-65412881 | Msa0265170:intron | 15.0% |
| !! | AAACAAATTACAATATAAAC+GGG | - | chr2_2:65413101-65413120 | None:intergenic | 15.0% |
| !! | CAAACAAATTACAATATAAA+CGG | - | chr2_2:65413102-65413121 | None:intergenic | 15.0% |
| !! | TGATAAACTAATCAACAAAT+CGG | - | chr2_2:65409036-65409055 | None:intergenic | 20.0% |
| !!! | TTTGTTGATTAGTTTATCAT+CGG | + | chr2_2:65409037-65409056 | Msa0265170:intron | 20.0% |
| !! | AATTGTTATGAAATGAAATG+TGG | + | chr2_2:65409218-65409237 | Msa0265170:intron | 20.0% |
| !! | AACAACATATCAATTGTATA+AGG | - | chr2_2:65409431-65409450 | None:intergenic | 20.0% |
| !! | ATATACATTTATGAGACTTA+TGG | + | chr2_2:65409651-65409670 | Msa0265170:intron | 20.0% |
| !!! | TGTTTTTAATTTACTATCGT+TGG | - | chr2_2:65409753-65409772 | None:intergenic | 20.0% |
| !!! | AGTAGTTAATTTTTTAGTAG+TGG | - | chr2_2:65410277-65410296 | None:intergenic | 20.0% |
| !! | ACAAGTTTAACATTGAAAAA+TGG | - | chr2_2:65410417-65410436 | None:intergenic | 20.0% |
| !! | ATAGTTAAGGATGAAAATTA+TGG | - | chr2_2:65410448-65410467 | None:intergenic | 20.0% |
| !! | GATATCTAAACAAATTATTG+AGG | + | chr2_2:65410640-65410659 | Msa0265170:intron | 20.0% |
| !! | GACTTAAAATGATTATCAAT+AGG | - | chr2_2:65410776-65410795 | None:intergenic | 20.0% |
| !!! | GATAATCATTTTAAGTCAAT+AGG | + | chr2_2:65410779-65410798 | Msa0265170:intron | 20.0% |
| !!! | TTTTAGTCAATAATTAAGAG+TGG | - | chr2_2:65411021-65411040 | None:intergenic | 20.0% |
| !! | TTATCAATCAGTAAGATAAT+CGG | - | chr2_2:65411406-65411425 | None:intergenic | 20.0% |
| !!! | TTACTGATTGATAATATTGA+TGG | + | chr2_2:65411412-65411431 | Msa0265170:intron | 20.0% |
| !! | TACATAACACAGTAATAAAT+TGG | + | chr2_2:65411660-65411679 | Msa0265170:intron | 20.0% |
| !!! | GATTTTATCTGAAGATAAAT+CGG | - | chr2_2:65411946-65411965 | None:intergenic | 20.0% |
| !!! | TATGTTTTAAGAAAAACAAC+AGG | - | chr2_2:65412119-65412138 | None:intergenic | 20.0% |
| !!! | TTAAATTTTTGTATGCATCT+TGG | + | chr2_2:65412247-65412266 | Msa0265170:intron | 20.0% |
| !!! | TAAATTTTTGTATGCATCTT+GGG | + | chr2_2:65412248-65412267 | Msa0265170:intron | 20.0% |
| !! | ACAAACAAAATAAGTTAGTT+TGG | - | chr2_2:65412401-65412420 | None:intergenic | 20.0% |
| !! | AAACAAATATGTTGAAACTT+AGG | + | chr2_2:65412643-65412662 | Msa0265170:intron | 20.0% |
| !! | AACAAATATGTTGAAACTTA+GGG | + | chr2_2:65412644-65412663 | Msa0265170:intron | 20.0% |
| !! | TATTAAATTTCACGAGATAA+TGG | + | chr2_2:65412891-65412910 | Msa0265170:intron | 20.0% |
| !!! | CGTTTATATTGTAATTTGTT+TGG | + | chr2_2:65413100-65413119 | Msa0265170:intron | 20.0% |
| !!! | TAACTCTTATATTTTCAGTA+TGG | + | chr2_2:65413521-65413540 | Msa0265170:intron | 20.0% |
| !! | CAAATAGAAAAACTAAATAC+AGG | - | chr2_2:65413805-65413824 | None:intergenic | 20.0% |
| !!! | ATTTTCAGTTATTGATGATT+TGG | + | chr2_2:65414037-65414056 | Msa0265170:three_prime_UTR | 20.0% |
| ! | AAGAAAAGAAAAGTGAAGTT+TGG | + | chr2_2:65408647-65408666 | Msa0265170:five_prime_UTR | 25.0% |
| !!! | GAATTTGATTTGGTTTTGTT+TGG | - | chr2_2:65408793-65408812 | None:intergenic | 25.0% |
| ! | TGATATGTTGGAATTTGATT+TGG | - | chr2_2:65408803-65408822 | None:intergenic | 25.0% |
| ! | AGGAACTAATTTAAAGAAGA+AGG | - | chr2_2:65408930-65408949 | None:intergenic | 25.0% |
| ! | TAATTTCACCCCTAAAAAAA+TGG | + | chr2_2:65408971-65408990 | Msa0265170:intron | 25.0% |
| ! | AATTTCACCCCTAAAAAAAT+GGG | + | chr2_2:65408972-65408991 | Msa0265170:intron | 25.0% |
| ! | GATAAACTAATCAACAAATC+GGG | - | chr2_2:65409035-65409054 | None:intergenic | 25.0% |
| !!! | ATGATTTTTTCTTAGTGTTG+TGG | + | chr2_2:65409193-65409212 | Msa0265170:intron | 25.0% |
| !! | CTATTCATATTTTGTGGTTA+TGG | + | chr2_2:65409622-65409641 | Msa0265170:intron | 25.0% |
| ! | AAGTATACCTAATATAACCA+TGG | - | chr2_2:65409885-65409904 | None:intergenic | 25.0% |
| ! | TACATATGATACTTTCAAAC+TGG | - | chr2_2:65409981-65410000 | None:intergenic | 25.0% |
| ! | AAGTATCATATGTAATTCTG+AGG | + | chr2_2:65409987-65410006 | Msa0265170:intron | 25.0% |
| ! | GATTATGATAAAGCAGTAAA+TGG | - | chr2_2:65410152-65410171 | None:intergenic | 25.0% |
| !! | TTGACAATGAACAACATTTT+GGG | - | chr2_2:65410328-65410347 | None:intergenic | 25.0% |
| ! | ATTTATCTACAGGATAGTTA+AGG | - | chr2_2:65410461-65410480 | None:intergenic | 25.0% |
| !!! | AGTTCAGATCAGAATTTTTT+AGG | + | chr2_2:65410590-65410609 | Msa0265170:intron | 25.0% |
| !! | TGTGTATTCTTGTTATACTT+TGG | + | chr2_2:65410616-65410635 | Msa0265170:intron | 25.0% |
| ! | GTTTCAGAATTATTCTTTCA+TGG | + | chr2_2:65410667-65410686 | Msa0265170:intron | 25.0% |
| ! | TGCTTATATGAAAAATGCAT+TGG | + | chr2_2:65410701-65410720 | Msa0265170:intron | 25.0% |
| !!! | AAAGAATAATTAGGGGTATT+TGG | + | chr2_2:65410750-65410769 | Msa0265170:intron | 25.0% |
| ! | TCAAGAAGAAAAATTAACCA+TGG | - | chr2_2:65410821-65410840 | None:intergenic | 25.0% |
| ! | GTATTATGATATTCCTGATA+CGG | + | chr2_2:65410945-65410964 | Msa0265170:CDS | 25.0% |
| ! | AATTAAGAGTGGCATAATTA+AGG | - | chr2_2:65411010-65411029 | None:intergenic | 25.0% |
| !!! | TTGTTGTGGATTTTTTATTG+AGG | + | chr2_2:65411230-65411249 | Msa0265170:intron | 25.0% |
| !! | TTTTTATTGAGGTCAAAAGA+TGG | + | chr2_2:65411241-65411260 | Msa0265170:intron | 25.0% |
| ! | TTATGTACTTCAAATGCAAA+AGG | - | chr2_2:65411647-65411666 | None:intergenic | 25.0% |
| ! | AACACAGTAATAAATTGGAT+TGG | + | chr2_2:65411665-65411684 | Msa0265170:intron | 25.0% |
| ! | ACTCTTGAGATCTTTAATTA+TGG | + | chr2_2:65411712-65411731 | Msa0265170:intron | 25.0% |
| ! | GATAGGAAAACAACAAAAAA+TGG | - | chr2_2:65411885-65411904 | None:intergenic | 25.0% |
| ! | AGATAAAATCTCTAATGTAG+AGG | + | chr2_2:65411956-65411975 | Msa0265170:CDS | 25.0% |
| ! | ACATTAGTGAATGCAAAAAT+GGG | - | chr2_2:65412169-65412188 | None:intergenic | 25.0% |
| ! | AACATTAGTGAATGCAAAAA+TGG | - | chr2_2:65412170-65412189 | None:intergenic | 25.0% |
| ! | AAACTGATATATTGAAAGAG+AGG | - | chr2_2:65412433-65412452 | None:intergenic | 25.0% |
| !!! | GTTTTACTTCTCTAAAATTG+AGG | - | chr2_2:65412494-65412513 | None:intergenic | 25.0% |
| !!! | CATTTTATTTTATGTCACCA+TGG | - | chr2_2:65412609-65412628 | None:intergenic | 25.0% |
| !! | TTTCAGTAGCAGATTTTATT+TGG | - | chr2_2:65412691-65412710 | None:intergenic | 25.0% |
| !!! | AGAAATTTGTTGAACTTGTA+AGG | - | chr2_2:65412834-65412853 | None:intergenic | 25.0% |
| !! | AATACTAGCATTTTACAGAA+TGG | - | chr2_2:65413244-65413263 | None:intergenic | 25.0% |
| !!! | TTATTTTTACTGTCTAGAAG+AGG | + | chr2_2:65413495-65413514 | Msa0265170:intron | 25.0% |
| ! | TTGCAAAATACAAGTAAGAA+TGG | - | chr2_2:65413914-65413933 | None:intergenic | 25.0% |
| ! | TGCAATGTAATATCTTGTAA+AGG | + | chr2_2:65413929-65413948 | Msa0265170:three_prime_UTR | 25.0% |
| GGAAAAGATGTTTGTGAATT+TGG | + | chr2_2:65408684-65408703 | Msa0265170:five_prime_UTR | 30.0% | |
| !!! | TGATTTGGTTTTGTTTGGTT+TGG | - | chr2_2:65408788-65408807 | None:intergenic | 30.0% |
| !!! | TGAAATGCCCATTTTTTTAG+GGG | - | chr2_2:65408982-65409001 | None:intergenic | 30.0% |
| !!! | CTGAAATGCCCATTTTTTTA+GGG | - | chr2_2:65408983-65409002 | None:intergenic | 30.0% |
| ! | ATTAGTTTATCATCGGATAC+AGG | + | chr2_2:65409044-65409063 | Msa0265170:intron | 30.0% |
| ACACAGATCAGATGAAAATT+GGG | - | chr2_2:65409162-65409181 | None:intergenic | 30.0% | |
| TACACAGATCAGATGAAAAT+TGG | - | chr2_2:65409163-65409182 | None:intergenic | 30.0% | |
| TCTGATCTGTGTAATCAAAT+TGG | + | chr2_2:65409170-65409189 | Msa0265170:intron | 30.0% | |
| TTTCTGATTGCTGTCAAAAT+TGG | + | chr2_2:65409321-65409340 | Msa0265170:intron | 30.0% | |
| !! | GATATGTTGTTTCTTTGTCA+AGG | + | chr2_2:65409440-65409459 | Msa0265170:intron | 30.0% |
| TTCTTTGTCAAGGTTACTAA+AGG | + | chr2_2:65409450-65409469 | Msa0265170:intron | 30.0% | |
| TCTTTGTCAAGGTTACTAAA+GGG | + | chr2_2:65409451-65409470 | Msa0265170:intron | 30.0% | |
| TAAAATCTTATTGACCCAGA+GGG | + | chr2_2:65409489-65409508 | Msa0265170:CDS | 30.0% | |
| TATAAGCCCGAATTATCTAT+CGG | - | chr2_2:65409520-65409539 | None:intergenic | 30.0% | |
| AAGAGTTATGAAGTTCACAA+AGG | + | chr2_2:65409847-65409866 | Msa0265170:CDS | 30.0% | |
| ! | GTTTTATGTGAACTTAGGTT+TGG | + | chr2_2:65410088-65410107 | Msa0265170:intron | 30.0% |
| !!! | CAATTGATATCTGCTTTTTC+AGG | + | chr2_2:65410181-65410200 | Msa0265170:intron | 30.0% |
| ! | ATATAGCTTCTTGTTGTGAT+GGG | - | chr2_2:65410253-65410272 | None:intergenic | 30.0% |
| ! | AATATAGCTTCTTGTTGTGA+TGG | - | chr2_2:65410254-65410273 | None:intergenic | 30.0% |
| ! | CTTGACAATGAACAACATTT+TGG | - | chr2_2:65410329-65410348 | None:intergenic | 30.0% |
| AATTCACGCAATTTATCTAC+AGG | - | chr2_2:65410471-65410490 | None:intergenic | 30.0% | |
| ATAAATTGCGTGAATTAGCT+TGG | + | chr2_2:65410475-65410494 | Msa0265170:CDS | 30.0% | |
| TCTAAACAAATTATTGAGGG+TGG | + | chr2_2:65410644-65410663 | Msa0265170:intron | 30.0% | |
| CTAAACAAATTATTGAGGGT+GGG | + | chr2_2:65410645-65410664 | Msa0265170:intron | 30.0% | |
| TTTAAAGATGAACTGACAAC+AGG | + | chr2_2:65410843-65410862 | Msa0265170:intron | 30.0% | |
| TTAAAGATGAACTGACAACA+GGG | + | chr2_2:65410844-65410863 | Msa0265170:intron | 30.0% | |
| ACCAACTAATTCAGATAGAA+GGG | + | chr2_2:65410873-65410892 | Msa0265170:CDS | 30.0% | |
| ATCCTGTCTTAAATAGTTAG+CGG | + | chr2_2:65411338-65411357 | Msa0265170:intron | 30.0% | |
| AGATAATCGGAACAAAATCT+AGG | - | chr2_2:65411393-65411412 | None:intergenic | 30.0% | |
| ! | AGCTTAATCCATTTCTAGAA+GGG | - | chr2_2:65411454-65411473 | None:intergenic | 30.0% |
| ! | AAGCTTAATCCATTTCTAGA+AGG | - | chr2_2:65411455-65411474 | None:intergenic | 30.0% |
| TTCCTATCAGAATACTTAGA+AGG | + | chr2_2:65411897-65411916 | Msa0265170:CDS | 30.0% | |
| TCCTATCAGAATACTTAGAA+GGG | + | chr2_2:65411898-65411917 | Msa0265170:CDS | 30.0% | |
| !! | TGTCTTTAAGTTGAAGGAAT+TGG | + | chr2_2:65412061-65412080 | Msa0265170:CDS | 30.0% |
| CATTAGTGAATGCAAAAATG+GGG | - | chr2_2:65412168-65412187 | None:intergenic | 30.0% | |
| GTATGACACTATGAAATGAT+AGG | + | chr2_2:65412294-65412313 | Msa0265170:intron | 30.0% | |
| CTAAAATTGAGGACATGTAA+TGG | - | chr2_2:65412483-65412502 | None:intergenic | 30.0% | |
| ATCAGACATCACACTTAAAA+AGG | - | chr2_2:65412945-65412964 | None:intergenic | 30.0% | |
| AATATATACACAAGGAAGTC+AGG | - | chr2_2:65413040-65413059 | None:intergenic | 30.0% | |
| AACTGGCAAATATATACACA+AGG | - | chr2_2:65413048-65413067 | None:intergenic | 30.0% | |
| ! | ATTTGCCAGTTTTCTTCTTA+CGG | + | chr2_2:65413057-65413076 | Msa0265170:CDS | 30.0% |
| ATCTTGTAGTCAAGATGATA+AGG | + | chr2_2:65413133-65413152 | Msa0265170:intron | 30.0% | |
| ! | CTGAATTTTTATGCTGAACT+AGG | + | chr2_2:65413354-65413373 | Msa0265170:intron | 30.0% |
| TATAACCTAACATGCTAAAC+GGG | - | chr2_2:65413418-65413437 | None:intergenic | 30.0% | |
| CTATAACCTAACATGCTAAA+CGG | - | chr2_2:65413419-65413438 | None:intergenic | 30.0% | |
| TGTAATATCTTGTAAAGGAG+AGG | + | chr2_2:65413934-65413953 | Msa0265170:three_prime_UTR | 30.0% | |
| AAGGAGAGGTAAAAATAAAC+TGG | + | chr2_2:65413948-65413967 | Msa0265170:three_prime_UTR | 30.0% | |
| AACTGAAAATTAACTCCCAT+TGG | - | chr2_2:65414027-65414046 | None:intergenic | 30.0% | |
| ! | TCAGTTATTGATGATTTGGA+TGG | + | chr2_2:65414041-65414060 | Msa0265170:three_prime_UTR | 30.0% |
| AAGAAAAGTGAAGTTTGGAG+TGG | + | chr2_2:65408652-65408671 | Msa0265170:five_prime_UTR | 35.0% | |
| ! | GTTGTTCATGGTTGATATGT+TGG | - | chr2_2:65408815-65408834 | None:intergenic | 35.0% |
| AACAAAGACACTAGTACCAT+AGG | + | chr2_2:65408847-65408866 | Msa0265170:CDS | 35.0% | |
| TTTGGTTGAATCGAGAATCA+AGG | - | chr2_2:65408876-65408895 | None:intergenic | 35.0% | |
| AAACCCTCAGAAATGTTCAA+GGG | + | chr2_2:65408893-65408912 | Msa0265170:CDS | 35.0% | |
| ATACCCTTGAACATTTCTGA+GGG | - | chr2_2:65408899-65408918 | None:intergenic | 35.0% | |
| AATACCCTTGAACATTTCTG+AGG | - | chr2_2:65408900-65408919 | None:intergenic | 35.0% | |
| !!! | CCTGAAATGCCCATTTTTTT+AGG | - | chr2_2:65408984-65409003 | None:intergenic | 35.0% |
| CCTAAAAAAATGGGCATTTC+AGG | + | chr2_2:65408981-65409000 | Msa0265170:intron | 35.0% | |
| ACAGATCAGATGAAAATTGG+GGG | - | chr2_2:65409160-65409179 | None:intergenic | 35.0% | |
| CACAGATCAGATGAAAATTG+GGG | - | chr2_2:65409161-65409180 | None:intergenic | 35.0% | |
| ! | TGGGTCAATAAGATTTTACC+AGG | - | chr2_2:65409487-65409506 | None:intergenic | 35.0% |
| GTAAAATCTTATTGACCCAG+AGG | + | chr2_2:65409488-65409507 | Msa0265170:CDS | 35.0% | |
| GGTAGATCCGATAGATAATT+CGG | + | chr2_2:65409510-65409529 | Msa0265170:CDS | 35.0% | |
| GTAGATCCGATAGATAATTC+GGG | + | chr2_2:65409511-65409530 | Msa0265170:CDS | 35.0% | |
| TATACTCACCAACTTACCAA+AGG | + | chr2_2:65409536-65409555 | Msa0265170:CDS | 35.0% | |
| AGTTCCTCATATAGTGATAC+TGG | + | chr2_2:65409559-65409578 | Msa0265170:CDS | 35.0% | |
| ATACAGGAAGAAGTTCACAA+TGG | + | chr2_2:65409707-65409726 | Msa0265170:intron | 35.0% | |
| ! | TCTGGAACCATGGTTATATT+AGG | + | chr2_2:65409875-65409894 | Msa0265170:CDS | 35.0% |
| TGATACTTTCAAACTGGAAG+AGG | - | chr2_2:65409975-65409994 | None:intergenic | 35.0% | |
| GCAACGTGTTAGACTTATTA+TGG | - | chr2_2:65410019-65410038 | None:intergenic | 35.0% | |
| !! | GTCGAGTTTTATGTGAACTT+AGG | + | chr2_2:65410083-65410102 | Msa0265170:intron | 35.0% |
| ! | GTCTTTCATTCCCTTGATTT+TGG | + | chr2_2:65410302-65410321 | Msa0265170:intron | 35.0% |
| ! | ACATTTTGGGCCAAAATCAA+GGG | - | chr2_2:65410315-65410334 | None:intergenic | 35.0% |
| ! | AACATTTTGGGCCAAAATCA+AGG | - | chr2_2:65410316-65410335 | None:intergenic | 35.0% |
| CACCAACTAATTCAGATAGA+AGG | + | chr2_2:65410872-65410891 | Msa0265170:CDS | 35.0% | |
| TCCCTTCTATCTGAATTAGT+TGG | - | chr2_2:65410877-65410896 | None:intergenic | 35.0% | |
| AACTAATTCAGATAGAAGGG+AGG | + | chr2_2:65410876-65410895 | Msa0265170:CDS | 35.0% | |
| ACTAATTCAGATAGAAGGGA+GGG | + | chr2_2:65410877-65410896 | Msa0265170:CDS | 35.0% | |
| TACAGTTCTTGGACAATCAA+CGG | - | chr2_2:65411089-65411108 | None:intergenic | 35.0% | |
| TAATATAAGGCCTGACAAAC+AGG | - | chr2_2:65411192-65411211 | None:intergenic | 35.0% | |
| CATTCTAGTGTTCTTTGTTG+TGG | + | chr2_2:65411216-65411235 | Msa0265170:intron | 35.0% | |
| !!! | GGATTTTAGTTCGAGTAAGA+TGG | + | chr2_2:65411262-65411281 | Msa0265170:intron | 35.0% |
| ATGGTTAGACAGGGTTTATA+AGG | + | chr2_2:65411281-65411300 | Msa0265170:intron | 35.0% | |
| ! | ATCCGCTAACTATTTAAGAC+AGG | - | chr2_2:65411343-65411362 | None:intergenic | 35.0% |
| ! | TGTAGATTCCCTTCTAGAAA+TGG | + | chr2_2:65411443-65411462 | Msa0265170:intron | 35.0% |
| ! | ATACTTCTGTTTCTTCCTAG+CGG | + | chr2_2:65411548-65411567 | Msa0265170:intron | 35.0% |
| ! | TAGTTTCTTTTCCTACGTCA+TGG | - | chr2_2:65411584-65411603 | None:intergenic | 35.0% |
| GCAAAAAATAGTCGACAAGA+AGG | - | chr2_2:65411743-65411762 | None:intergenic | 35.0% | |
| TCCCTTCTAAGTATTCTGAT+AGG | - | chr2_2:65411902-65411921 | None:intergenic | 35.0% | |
| TGCTTGTCAAAATTGCTTGA+TGG | + | chr2_2:65411993-65412012 | Msa0265170:CDS | 35.0% | |
| !! | AAGGCTTGTCTTTAAGTTGA+AGG | + | chr2_2:65412055-65412074 | Msa0265170:CDS | 35.0% |
| !! | TTAAGTTGAAGGAATTGGTC+AGG | + | chr2_2:65412066-65412085 | Msa0265170:CDS | 35.0% |
| !! | TTGATGGTAACCTTTTTCTC+TGG | + | chr2_2:65412093-65412112 | Msa0265170:intron | 35.0% |
| CACTAAACCGTATAGACATA+CGG | - | chr2_2:65412221-65412240 | None:intergenic | 35.0% | |
| GTATGTCTATACGGTTTAGT+GGG | + | chr2_2:65412220-65412239 | Msa0265170:intron | 35.0% | |
| ! | GTCATACTCACATTTTCTCT+AGG | - | chr2_2:65412281-65412300 | None:intergenic | 35.0% |
| AAATGATAGGTTGTCGTACA+AGG | + | chr2_2:65412307-65412326 | Msa0265170:intron | 35.0% | |
| AATGATAGGTTGTCGTACAA+GGG | + | chr2_2:65412308-65412327 | Msa0265170:intron | 35.0% | |
| CCAAATCCAAATGCAAAAGA+GGG | - | chr2_2:65412362-65412381 | None:intergenic | 35.0% | |
| TCCAAATCCAAATGCAAAAG+AGG | - | chr2_2:65412363-65412382 | None:intergenic | 35.0% | |
| ACCATTAGATACTGCTTTCA+TGG | + | chr2_2:65412579-65412598 | Msa0265170:intron | 35.0% | |
| ACCATGAAAGCAGTATCTAA+TGG | - | chr2_2:65412583-65412602 | None:intergenic | 35.0% | |
| TGGACTGAACAAATTTGACA+CGG | + | chr2_2:65412911-65412930 | Msa0265170:intron | 35.0% | |
| GTAGTCAAGATGATAAGGAA+TGG | + | chr2_2:65413138-65413157 | Msa0265170:intron | 35.0% | |
| TGGTAGATTTCAGTAAACGA+CGG | + | chr2_2:65413192-65413211 | Msa0265170:intron | 35.0% | |
| ! | ATCAAAGTGTTCAACTCAGA+TGG | + | chr2_2:65413271-65413290 | Msa0265170:intron | 35.0% |
| ! | TCAAAGTGTTCAACTCAGAT+GGG | + | chr2_2:65413272-65413291 | Msa0265170:intron | 35.0% |
| ! | GTCTCACATACCCTTTTTAT+TGG | + | chr2_2:65413391-65413410 | Msa0265170:intron | 35.0% |
| CTAAACGGGACCAATAAAAA+GGG | - | chr2_2:65413404-65413423 | None:intergenic | 35.0% | |
| GAATGCCAAAAAACGAACAA+GGG | - | chr2_2:65413474-65413493 | None:intergenic | 35.0% | |
| AGAATGCCAAAAAACGAACA+AGG | - | chr2_2:65413475-65413494 | None:intergenic | 35.0% | |
| !!! | ATCTATCGTCGTTTTTTCAG+TGG | + | chr2_2:65413604-65413623 | Msa0265170:intron | 35.0% |
| TAAATACAGGAATTCAGCAG+AGG | - | chr2_2:65413792-65413811 | None:intergenic | 35.0% | |
| GAAAAAAGTAGGATGGAATG+AGG | - | chr2_2:65413837-65413856 | None:intergenic | 35.0% | |
| TAAAGGGGAAAAAAGTAGGA+TGG | - | chr2_2:65413844-65413863 | None:intergenic | 35.0% | |
| ACACTAAAGGGGAAAAAAGT+AGG | - | chr2_2:65413848-65413867 | None:intergenic | 35.0% | |
| TTGCAATGTCAACAACCAAT+GGG | + | chr2_2:65414009-65414028 | Msa0265170:three_prime_UTR | 35.0% | |
| ! | GTTGTCGTTGTTGTTGTTCA+TGG | - | chr2_2:65408827-65408846 | None:intergenic | 40.0% |
| TCGAGAATCAAGGATTCCTA+TGG | - | chr2_2:65408866-65408885 | None:intergenic | 40.0% | |
| ! | CTTGAACATTTCTGAGGGTT+TGG | - | chr2_2:65408894-65408913 | None:intergenic | 40.0% |
| CAAACCCTCAGAAATGTTCA+AGG | + | chr2_2:65408892-65408911 | Msa0265170:CDS | 40.0% | |
| CACTATATGAGGAACTCCTT+TGG | - | chr2_2:65409555-65409574 | None:intergenic | 40.0% | |
| TGTGCCAGTATCACTATATG+AGG | - | chr2_2:65409566-65409585 | None:intergenic | 40.0% | |
| TCGTGCAACTGAAACAATAG+AGG | + | chr2_2:65409591-65409610 | Msa0265170:CDS | 40.0% | |
| GTGACTTCTGCTCTTAATAC+AGG | + | chr2_2:65409691-65409710 | Msa0265170:intron | 40.0% | |
| !! | CTATCGTTGGTAGTTCCAAA+TGG | - | chr2_2:65409740-65409759 | None:intergenic | 40.0% |
| TTCAGTTGGGTTCTCTACAT+GGG | - | chr2_2:65409783-65409802 | None:intergenic | 40.0% | |
| ATTTCCGGACTTCTTCAGTT+GGG | - | chr2_2:65409796-65409815 | None:intergenic | 40.0% | |
| AAGTTCACAAAGGTTCTCTC+TGG | + | chr2_2:65409857-65409876 | Msa0265170:CDS | 40.0% | |
| ACTGTAGGACGCATATAATC+TGG | - | chr2_2:65410510-65410529 | None:intergenic | 40.0% | |
| ATTATATGCGTCCTACAGTG+TGG | + | chr2_2:65410511-65410530 | Msa0265170:CDS | 40.0% | |
| ! | GTCAACGTCATGATTTTCCA+TGG | + | chr2_2:65410801-65410820 | Msa0265170:intron | 40.0% |
| GTGGCATAATTAAGGATACC+TGG | - | chr2_2:65411002-65411021 | None:intergenic | 40.0% | |
| ATTTCTGAACTTGTGGTTGC+TGG | - | chr2_2:65411129-65411148 | None:intergenic | 40.0% | |
| ACCACAAGTTCAGAAATCAC+TGG | + | chr2_2:65411132-65411151 | Msa0265170:CDS | 40.0% | |
| TCCAGTGATTTCTGAACTTG+TGG | - | chr2_2:65411136-65411155 | None:intergenic | 40.0% | |
| TTACAGATGACCTGTTTGTC+AGG | + | chr2_2:65411179-65411198 | Msa0265170:intron | 40.0% | |
| TTCGAGTAAGATGGTTAGAC+AGG | + | chr2_2:65411271-65411290 | Msa0265170:intron | 40.0% | |
| TCGAGTAAGATGGTTAGACA+GGG | + | chr2_2:65411272-65411291 | Msa0265170:intron | 40.0% | |
| GTTAGACAGGGTTTATAAGG+CGG | + | chr2_2:65411284-65411303 | Msa0265170:intron | 40.0% | |
| TTAGACAGGGTTTATAAGGC+GGG | + | chr2_2:65411285-65411304 | Msa0265170:intron | 40.0% | |
| ! | TAGAAGCATGTAAGACAGTG+TGG | + | chr2_2:65411475-65411494 | Msa0265170:intron | 40.0% |
| GTTGCAATCTATGCTTGAGA+TGG | + | chr2_2:65411687-65411706 | Msa0265170:intron | 40.0% | |
| TGATAACCTCATCTTCTTCC+AGG | + | chr2_2:65411805-65411824 | Msa0265170:intron | 40.0% | |
| GATAACCTCATCTTCTTCCA+GGG | + | chr2_2:65411806-65411825 | Msa0265170:intron | 40.0% | |
| ! | TAGAAGGGAGCATAGATAAC+TGG | + | chr2_2:65411913-65411932 | Msa0265170:CDS | 40.0% |
| CATTACACATTTGCTCAACC+AGG | + | chr2_2:65412026-65412045 | Msa0265170:CDS | 40.0% | |
| TTGCTCAACCAGGAATTCAA+AGG | + | chr2_2:65412036-65412055 | Msa0265170:CDS | 40.0% | |
| AAGACAAGCCTTTGAATTCC+TGG | - | chr2_2:65412047-65412066 | None:intergenic | 40.0% | |
| AAACAACAGGCCAGAGAAAA+AGG | - | chr2_2:65412106-65412125 | None:intergenic | 40.0% | |
| TACGGTGTGGTTGTTGAAAT+GGG | - | chr2_2:65412203-65412222 | None:intergenic | 40.0% | |
| ATACGGTGTGGTTGTTGAAA+TGG | - | chr2_2:65412204-65412223 | None:intergenic | 40.0% | |
| AACCACACCGTATGTCTATA+CGG | + | chr2_2:65412211-65412230 | Msa0265170:intron | 40.0% | |
| CGTATGTCTATACGGTTTAG+TGG | + | chr2_2:65412219-65412238 | Msa0265170:intron | 40.0% | |
| !!! | TCGTACAAGGGTGTCTATTT+TGG | + | chr2_2:65412320-65412339 | Msa0265170:intron | 40.0% |
| !!! | CGTACAAGGGTGTCTATTTT+GGG | + | chr2_2:65412321-65412340 | Msa0265170:intron | 40.0% |
| ! | TAACAGCCCTCTTTTGCATT+TGG | + | chr2_2:65412353-65412372 | Msa0265170:intron | 40.0% |
| ! | CCCTCTTTTGCATTTGGATT+TGG | + | chr2_2:65412359-65412378 | Msa0265170:intron | 40.0% |
| ! | ACTGCTTTCATGGTTTTCCA+TGG | + | chr2_2:65412589-65412608 | Msa0265170:intron | 40.0% |
| ATATGGCTTGAAACAGGATC+TGG | - | chr2_2:65412726-65412745 | None:intergenic | 40.0% | |
| AGATCCTGTTTCAAGCCATA+TGG | + | chr2_2:65412725-65412744 | Msa0265170:intron | 40.0% | |
| TTCTCCATATGGCTTGAAAC+AGG | - | chr2_2:65412732-65412751 | None:intergenic | 40.0% | |
| TTCAAGCCATATGGAGAATC+AGG | + | chr2_2:65412734-65412753 | Msa0265170:CDS | 40.0% | |
| TCAAGCCATATGGAGAATCA+GGG | + | chr2_2:65412735-65412754 | Msa0265170:CDS | 40.0% | |
| ! | TTCTTCAATTTGCTTTCCGC+TGG | + | chr2_2:65412766-65412785 | Msa0265170:CDS | 40.0% |
| TTAGAAGACAGTTGAACCAG+CGG | - | chr2_2:65412785-65412804 | None:intergenic | 40.0% | |
| AAAAATCAGTGCAAACCTCG+CGG | - | chr2_2:65412809-65412828 | None:intergenic | 40.0% | |
| ATACACAAGGAAGTCAGGTA+AGG | - | chr2_2:65413035-65413054 | None:intergenic | 40.0% | |
| ACTCACCGTAAGAAGAAAAC+TGG | - | chr2_2:65413065-65413084 | None:intergenic | 40.0% | |
| GTTTACTGAAATCTACCAGC+CGG | - | chr2_2:65413190-65413209 | None:intergenic | 40.0% | |
| ! | AAAAAGGGTATGTGAGACTG+TGG | - | chr2_2:65413389-65413408 | None:intergenic | 40.0% |
| GCTAAACGGGACCAATAAAA+AGG | - | chr2_2:65413405-65413424 | None:intergenic | 40.0% | |
| CCAAAAAACGAACAAGGGTA+AGG | - | chr2_2:65413469-65413488 | None:intergenic | 40.0% | |
| !!! | CCTTACCCTTGTTCGTTTTT+TGG | + | chr2_2:65413466-65413485 | Msa0265170:intron | 40.0% |
| TACTCTCTCGTGCATTTATG+TGG | + | chr2_2:65413721-65413740 | Msa0265170:CDS | 40.0% | |
| ATTTAGGCAGCTAAATGGCT+AGG | - | chr2_2:65413768-65413787 | None:intergenic | 40.0% | |
| AGTAGGATGGAATGAGGAAA+AGG | - | chr2_2:65413831-65413850 | None:intergenic | 40.0% | |
| !!! | CTTTTTTCCCCTTTAGTGTG+TGG | + | chr2_2:65413849-65413868 | Msa0265170:three_prime_UTR | 40.0% |
| AACAAGCACCACACACTAAA+GGG | - | chr2_2:65413860-65413879 | None:intergenic | 40.0% | |
| AAACAAGCACCACACACTAA+AGG | - | chr2_2:65413861-65413880 | None:intergenic | 40.0% | |
| CTTGCAATGTCAACAACCAA+TGG | + | chr2_2:65414008-65414027 | Msa0265170:three_prime_UTR | 40.0% | |
| ! | GTGAAGTTTGGAGTGGTTGA+AGG | + | chr2_2:65408659-65408678 | Msa0265170:five_prime_UTR | 45.0% |
| ! | AGTTTGGAGTGGTTGAAGGA+AGG | + | chr2_2:65408663-65408682 | Msa0265170:five_prime_UTR | 45.0% |
| ATCTATCGGATCTACCCTCT+GGG | - | chr2_2:65409506-65409525 | None:intergenic | 45.0% | |
| TATCTATCGGATCTACCCTC+TGG | - | chr2_2:65409507-65409526 | None:intergenic | 45.0% | |
| GAGGAACTCCTTTGGTAAGT+TGG | - | chr2_2:65409547-65409566 | None:intergenic | 45.0% | |
| CACAATGGAAGCAAGCCATT+TGG | + | chr2_2:65409722-65409741 | Msa0265170:CDS | 45.0% | |
| CTTCAGTTGGGTTCTCTACA+TGG | - | chr2_2:65409784-65409803 | None:intergenic | 45.0% | |
| AGAACCCAACTGAAGAAGTC+CGG | + | chr2_2:65409789-65409808 | Msa0265170:CDS | 45.0% | |
| GATTTCCGGACTTCTTCAGT+TGG | - | chr2_2:65409797-65409816 | None:intergenic | 45.0% | |
| AGAAGTCCGGAAATCTTCCA+TGG | + | chr2_2:65409802-65409821 | Msa0265170:CDS | 45.0% | |
| GAAGTCCGGAAATCTTCCAT+GGG | + | chr2_2:65409803-65409822 | Msa0265170:CDS | 45.0% | |
| TACCACCCATGGAAGATTTC+CGG | - | chr2_2:65409811-65409830 | None:intergenic | 45.0% | |
| !! | AAAGGTTCTCTCTGGAACCA+TGG | + | chr2_2:65409865-65409884 | Msa0265170:CDS | 45.0% |
| CAAACTGGAAGAGGTCACTT+AGG | - | chr2_2:65409966-65409985 | None:intergenic | 45.0% | |
| ! | TTGCGTGAATTAGCTTGGAG+TGG | + | chr2_2:65410480-65410499 | Msa0265170:CDS | 45.0% |
| AAGAGAAGTCTCCACACTGT+AGG | - | chr2_2:65410525-65410544 | None:intergenic | 45.0% | |
| TACAGTGTGGAGACTTCTCT+TGG | + | chr2_2:65410524-65410543 | Msa0265170:CDS | 45.0% | |
| !!! | AGGGAGTTTTGAGAAGGAAG+CGG | + | chr2_2:65410896-65410915 | Msa0265170:CDS | 45.0% |
| GCAACATCAGGTACAGTTCT+TGG | - | chr2_2:65411100-65411119 | None:intergenic | 45.0% | |
| TGCTGGAAGAATGCAACATC+AGG | - | chr2_2:65411112-65411131 | None:intergenic | 45.0% | |
| TGGAGCGTATTCTTTACGCA+TGG | + | chr2_2:65411152-65411171 | Msa0265170:CDS | 45.0% | |
| TCCAGCAAGTGGATATGTTC+AGG | + | chr2_2:65411839-65411858 | Msa0265170:CDS | 45.0% | |
| CCAGCAAGTGGATATGTTCA+GGG | + | chr2_2:65411840-65411859 | Msa0265170:CDS | 45.0% | |
| CAGCAAGTGGATATGTTCAG+GGG | + | chr2_2:65411841-65411860 | Msa0265170:CDS | 45.0% | |
| ATGTAGAGGCTGACTGCTAT+TGG | + | chr2_2:65411970-65411989 | Msa0265170:CDS | 45.0% | |
| AGTTGAAGGAATTGGTCAGG+AGG | + | chr2_2:65412069-65412088 | Msa0265170:CDS | 45.0% | |
| GAATTGGTCAGGAGGATTGA+TGG | + | chr2_2:65412077-65412096 | Msa0265170:CDS | 45.0% | |
| AACCGTATAGACATACGGTG+TGG | - | chr2_2:65412216-65412235 | None:intergenic | 45.0% | |
| !! | GAGAGCATTGATGAAGACTG+AGG | - | chr2_2:65412537-65412556 | None:intergenic | 45.0% |
| CAGCTAGATATGTGTCCCAA+AGG | - | chr2_2:65413003-65413022 | None:intergenic | 45.0% | |
| TGGGACACATATCTAGCTGA+AGG | + | chr2_2:65413004-65413023 | Msa0265170:CDS | 45.0% | |
| AGTGTTCAACTCAGATGGGA+TGG | + | chr2_2:65413276-65413295 | Msa0265170:intron | 45.0% | |
| TTGGTCCCGTTTAGCATGTT+AGG | + | chr2_2:65413410-65413429 | Msa0265170:intron | 45.0% | |
| !! | TCTGAGTTGGAAGGTGTTGA+AGG | - | chr2_2:65413674-65413693 | None:intergenic | 45.0% |
| AACACCTTCCAACTCAGAAC+TGG | + | chr2_2:65413676-65413695 | Msa0265170:CDS | 45.0% | |
| !! | TGATCAGTCCAGTTCTGAGT+TGG | - | chr2_2:65413687-65413706 | None:intergenic | 45.0% |
| AACTCAGAACTGGACTGATC+AGG | + | chr2_2:65413686-65413705 | Msa0265170:CDS | 45.0% | |
| ! | GAGGCATTTAGGCAGCTAAA+TGG | - | chr2_2:65413773-65413792 | None:intergenic | 45.0% |
| !! | GGAATTCAGCAGAGGCATTT+AGG | - | chr2_2:65413784-65413803 | None:intergenic | 45.0% |
| ACAAGCACCACACACTAAAG+GGG | - | chr2_2:65413859-65413878 | None:intergenic | 45.0% | |
| CTAAAGGGTCGTAGCATTCC+TGG | + | chr2_2:65409466-65409485 | Msa0265170:CDS | 50.0% | |
| AGTTGGGTTCTCTACATGGG+AGG | - | chr2_2:65409780-65409799 | None:intergenic | 50.0% | |
| GGAAATCTTCCATGGGTGGT+AGG | + | chr2_2:65409810-65409829 | Msa0265170:CDS | 50.0% | |
| ATCAGTAGTCCTACCACCCA+TGG | - | chr2_2:65409822-65409841 | None:intergenic | 50.0% | |
| !!! | GAAGGGAGGGAGTTTTGAGA+AGG | + | chr2_2:65410890-65410909 | Msa0265170:CDS | 50.0% |
| ! | GCAGTTTAGAGCCATGACGT+AGG | + | chr2_2:65411570-65411589 | Msa0265170:intron | 50.0% |
| AATGGCCCTGGAAGAAGATG+AGG | - | chr2_2:65411814-65411833 | None:intergenic | 50.0% | |
| CATCTTCTTCCAGGGCCATT+CGG | + | chr2_2:65411814-65411833 | Msa0265170:intron | 50.0% | |
| CCCTGAACATATCCACTTGC+TGG | - | chr2_2:65411843-65411862 | None:intergenic | 50.0% | |
| CCAGTCCCTGATTCTCCATA+TGG | - | chr2_2:65412743-65412762 | None:intergenic | 50.0% | |
| CCATATGGAGAATCAGGGAC+TGG | + | chr2_2:65412740-65412759 | Msa0265170:CDS | 50.0% | |
| CAACTGTCTTCTAATCCGCG+AGG | + | chr2_2:65412791-65412810 | Msa0265170:CDS | 50.0% | |
| AGGCGTGTGACAAGATGGAA+GGG | - | chr2_2:65412983-65413002 | None:intergenic | 50.0% | |
| AAGGCGTGTGACAAGATGGA+AGG | - | chr2_2:65412984-65413003 | None:intergenic | 50.0% | |
| TCCATCTTGTCACACGCCTT+TGG | + | chr2_2:65412984-65413003 | Msa0265170:CDS | 50.0% | |
| CCATCTTGTCACACGCCTTT+GGG | + | chr2_2:65412985-65413004 | Msa0265170:CDS | 50.0% | |
| TTGTCAATATGTGCCCCCTC+CGG | + | chr2_2:65413168-65413187 | Msa0265170:intron | 50.0% | |
| ACTGAAATCTACCAGCCGGA+GGG | - | chr2_2:65413186-65413205 | None:intergenic | 50.0% | |
| TACTGAAATCTACCAGCCGG+AGG | - | chr2_2:65413187-65413206 | None:intergenic | 50.0% | |
| TCAGATGGGATGGATGCATG+TGG | + | chr2_2:65413286-65413305 | Msa0265170:intron | 50.0% | |
| !! | CAGTCCAGTTCTGAGTTGGA+AGG | - | chr2_2:65413683-65413702 | None:intergenic | 50.0% |
| GACTGATCAGGAACTCGAGA+TGG | + | chr2_2:65413698-65413717 | Msa0265170:CDS | 50.0% | |
| GTCCGGAAATCTTCCATGGG+TGG | + | chr2_2:65409806-65409825 | Msa0265170:CDS | 55.0% | |
| TCGTCTGAGCGTTCCGTATC+AGG | - | chr2_2:65410961-65410980 | None:intergenic | 55.0% | |
| TGAGATCAGCATGCTTCGCC+AGG | + | chr2_2:65410981-65411000 | Msa0265170:CDS | 55.0% | |
| !! | CATGGCTCTAAACTGCCGCT+AGG | - | chr2_2:65411566-65411585 | None:intergenic | 55.0% |
| ! | TCCACTTGCTGGATGCCGAA+TGG | - | chr2_2:65411832-65411851 | None:intergenic | 55.0% |
| ! | CCCAAAGGCGTGTGACAAGA+TGG | - | chr2_2:65412988-65413007 | None:intergenic | 55.0% |
| TGAAATCTACCAGCCGGAGG+GGG | - | chr2_2:65413184-65413203 | None:intergenic | 55.0% | |
| CTGAAATCTACCAGCCGGAG+GGG | - | chr2_2:65413185-65413204 | None:intergenic | 55.0% | |
| GCCATTCGGCATCCAGCAAG+TGG | + | chr2_2:65411828-65411847 | Msa0265170:CDS | 60.0% | |
| TGCTGGATGCCGAATGGCCC+TGG | - | chr2_2:65411826-65411845 | None:intergenic | 65.0% | |
| CAATATGTGCCCCCTCCGGC+TGG | + | chr2_2:65413172-65413191 | Msa0265170:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 65408617 | 65414115 | 65408617 | ID=Msa0265170;Name=Msa0265170 |
| chr2_2 | mRNA | 65408617 | 65414115 | 65408617 | ID=Msa0265170-mRNA-1;Parent=Msa0265170;Name=Msa0265170-mRNA-1;_AED=0.12;_eAED=0.12;_QI=209|1|1|1|1|1|10|330|448 |
| chr2_2 | exon | 65408617 | 65408914 | 65408617 | ID=Msa0265170-mRNA-1:exon:20577;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65409462 | 65409612 | 65409462 | ID=Msa0265170-mRNA-1:exon:20578;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65409713 | 65409896 | 65409713 | ID=Msa0265170-mRNA-1:exon:20579;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65410475 | 65410545 | 65410475 | ID=Msa0265170-mRNA-1:exon:20580;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65410865 | 65411002 | 65410865 | ID=Msa0265170-mRNA-1:exon:20581;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65411082 | 65411173 | 65411082 | ID=Msa0265170-mRNA-1:exon:20582;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65411827 | 65412098 | 65411827 | ID=Msa0265170-mRNA-1:exon:20583;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65412727 | 65412812 | 65412727 | ID=Msa0265170-mRNA-1:exon:20584;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65412977 | 65413078 | 65412977 | ID=Msa0265170-mRNA-1:exon:20585;Parent=Msa0265170-mRNA-1 |
| chr2_2 | exon | 65413624 | 65414115 | 65413624 | ID=Msa0265170-mRNA-1:exon:20586;Parent=Msa0265170-mRNA-1 |
| chr2_2 | five_prime_UTR | 65408617 | 65408825 | 65408617 | ID=Msa0265170-mRNA-1:five_prime_utr;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65408826 | 65408914 | 65408826 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65409462 | 65409612 | 65409462 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65409713 | 65409896 | 65409713 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65410475 | 65410545 | 65410475 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65410865 | 65411002 | 65410865 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65411082 | 65411173 | 65411082 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65411827 | 65412098 | 65411827 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65412727 | 65412812 | 65412727 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65412977 | 65413078 | 65412977 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | CDS | 65413624 | 65413785 | 65413624 | ID=Msa0265170-mRNA-1:cds;Parent=Msa0265170-mRNA-1 |
| chr2_2 | three_prime_UTR | 65413786 | 65414115 | 65413786 | ID=Msa0265170-mRNA-1:three_prime_utr;Parent=Msa0265170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
