Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0224100 | XP_003597561.2 | 94.719 | 303 | 14 | 1 | 1 | 301 | 1 | 303 | 0.0 | 553 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0224100 | sp|F4IEY4|TRB5_ARATH | 44.194 | 310 | 135 | 10 | 1 | 298 | 1 | 284 | 9.06e-66 | 210 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0224100 | G7IS32 | 94.719 | 303 | 14 | 1 | 1 | 301 | 1 | 303 | 0.0 | 553 |
Gene ID | Type | Classification |
---|---|---|
Msa0224100 | TF | MYB-related |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0224100 | Msa1089240 | 0.835892 | 1.288201e-56 | -8.615850e-47 |
Msa0224100 | Msa1364130 | 0.844015 | 9.819868e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0224100 | MtrunA17_Chr2g0329921 | 94.719 | 303 | 14 | 1 | 1 | 301 | 1 | 303 | 0.0 | 553 |
Msa0224100 | MtrunA17_Chr8g0342871 | 46.254 | 307 | 136 | 7 | 1 | 300 | 1 | 285 | 1.89e-77 | 237 |
Msa0224100 | MtrunA17_Chr5g0401061 | 40.952 | 210 | 99 | 6 | 1 | 208 | 1 | 187 | 1.43e-35 | 130 |
Msa0224100 | MtrunA17_Chr4g0054131 | 38.605 | 215 | 112 | 5 | 1 | 208 | 1 | 202 | 2.31e-34 | 127 |
Msa0224100 | MtrunA17_Chr8g0384671 | 37.681 | 207 | 104 | 7 | 1 | 204 | 1 | 185 | 1.58e-30 | 116 |
Msa0224100 | MtrunA17_Chr2g0293381 | 35.885 | 209 | 107 | 5 | 1 | 204 | 1 | 187 | 5.81e-30 | 115 |
Msa0224100 | MtrunA17_Chr1g0166681 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 1.41e-20 | 87.4 |
Msa0224100 | MtrunA17_Chr8g0383821 | 62.069 | 58 | 22 | 0 | 1 | 58 | 1 | 58 | 1.83e-19 | 82.8 |
Msa0224100 | MtrunA17_Chr7g0260771 | 42.254 | 71 | 38 | 2 | 135 | 204 | 60 | 128 | 3.61e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0224100 | AT1G72740.2 | 44.737 | 304 | 136 | 9 | 1 | 298 | 1 | 278 | 6.42e-69 | 216 |
Msa0224100 | AT1G72740.1 | 44.194 | 310 | 135 | 10 | 1 | 298 | 1 | 284 | 9.21e-67 | 210 |
Msa0224100 | AT1G17520.4 | 41.083 | 314 | 142 | 9 | 1 | 298 | 1 | 287 | 6.14e-56 | 183 |
Msa0224100 | AT1G17520.3 | 40.952 | 315 | 142 | 10 | 1 | 298 | 1 | 288 | 3.34e-54 | 178 |
Msa0224100 | AT1G17520.1 | 40.625 | 320 | 141 | 10 | 1 | 298 | 1 | 293 | 3.79e-54 | 178 |
Msa0224100 | AT1G17520.2 | 40.498 | 321 | 141 | 11 | 1 | 298 | 1 | 294 | 2.79e-52 | 174 |
Msa0224100 | AT1G49950.3 | 37.500 | 208 | 109 | 3 | 1 | 208 | 1 | 187 | 1.22e-31 | 120 |
Msa0224100 | AT1G49950.1 | 37.500 | 208 | 109 | 3 | 1 | 208 | 1 | 187 | 1.22e-31 | 120 |
Msa0224100 | AT1G49950.2 | 37.500 | 208 | 109 | 3 | 1 | 208 | 1 | 187 | 1.22e-31 | 120 |
Msa0224100 | AT5G67580.2 | 34.314 | 204 | 117 | 5 | 1 | 204 | 1 | 187 | 1.63e-25 | 103 |
Msa0224100 | AT5G67580.1 | 34.314 | 204 | 117 | 5 | 1 | 204 | 1 | 187 | 1.63e-25 | 103 |
Msa0224100 | AT3G49850.1 | 33.014 | 209 | 111 | 5 | 1 | 204 | 1 | 185 | 3.60e-23 | 97.1 |
Msa0224100 | AT3G49850.2 | 33.014 | 209 | 111 | 5 | 1 | 204 | 1 | 185 | 3.60e-23 | 97.1 |
Msa0224100 | AT1G54260.1 | 35.079 | 191 | 91 | 5 | 139 | 298 | 6 | 194 | 8.73e-21 | 88.6 |
Msa0224100 | AT1G54240.1 | 31.638 | 177 | 95 | 8 | 141 | 298 | 57 | 226 | 1.89e-11 | 63.2 |
Msa0224100 | AT2G18050.1 | 40.476 | 84 | 46 | 2 | 137 | 218 | 24 | 105 | 7.90e-11 | 60.1 |
Find 74 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGTTCGCTTCACTTAATT+TGG | 0.214811 | 2_1:+73837259 | Msa0224100:exon |
CCTGGCAGGTCCATTTCTTT+TGG | 0.234603 | 2_1:-73836935 | None:intergenic |
ACAGAAAGATATTCAAAGTT+TGG | 0.268113 | 2_1:+73837073 | Msa0224100:CDS |
AGTTTCGGAAGCTTCCTTTA+TGG | 0.269510 | 2_1:-73836987 | None:intergenic |
AGAAATATGGTGCTGGAAAA+TGG | 0.290469 | 2_1:+73832554 | Msa0224100:CDS |
CAGAAAGATATTCAAAGTTT+GGG | 0.300205 | 2_1:+73837074 | Msa0224100:CDS |
ACGAACCTTGAGATCAATAT+TGG | 0.326871 | 2_1:-73832626 | None:intergenic |
CATCAAGGTGTTCAGAAATA+TGG | 0.349929 | 2_1:+73832541 | Msa0224100:CDS |
TGCATATGATGATGCCATAA+AGG | 0.370905 | 2_1:+73836973 | Msa0224100:CDS |
ACAAAATGGTTACAAGATAA+AGG | 0.372290 | 2_1:+73836865 | Msa0224100:CDS |
TGCTGCTGCTGCTGTTGCTC+CGG | 0.384625 | 2_1:+73832985 | Msa0224100:CDS |
CATCACCTGCAGGTACAAAA+TGG | 0.394363 | 2_1:+73836851 | Msa0224100:intron |
ACTCCCAAGGGTAAACCATC+TGG | 0.398706 | 2_1:+73832884 | Msa0224100:CDS |
AAGTCTGCAGGCTAGAGTTT+CGG | 0.422011 | 2_1:-73837002 | None:intergenic |
ACTACCTACACCAAAAGAAA+TGG | 0.422553 | 2_1:+73836925 | Msa0224100:CDS |
GCAGAAGCAGCAGGAGTACC+AGG | 0.430652 | 2_1:-73832953 | None:intergenic |
TGAAGCTCTATCAACAATCA+AGG | 0.441177 | 2_1:+73834588 | Msa0224100:CDS |
GGTACTCCTGCTGCTTCTGC+TGG | 0.444786 | 2_1:+73832956 | Msa0224100:CDS |
AGCATTTAAGTCAGAACCAT+TGG | 0.454179 | 2_1:-73834614 | None:intergenic |
GACCCAGATGGTTTACCCTT+GGG | 0.462495 | 2_1:-73832887 | None:intergenic |
CCTTCTCCGTCTCCTGCTCC+TGG | 0.470392 | 2_1:+73832935 | Msa0224100:CDS |
AGACCCAGATGGTTTACCCT+TGG | 0.488584 | 2_1:-73832888 | None:intergenic |
GGAGCAACAGCAGCAGCAGC+AGG | 0.489385 | 2_1:-73832983 | None:intergenic |
GGAGTAGCATTGCTTGGAGC+AGG | 0.489776 | 2_1:-73832914 | None:intergenic |
GGAGTACCAGCAGAAGCAGC+AGG | 0.492329 | 2_1:-73832962 | None:intergenic |
TTCTGAGAAGGCTGGCTAGT+AGG | 0.497538 | 2_1:-73833052 | None:intergenic |
CTCAAGCTCAGACTCCGATT+CGG | 0.498629 | 2_1:+73833026 | Msa0224100:CDS |
AATTATTAGATGACCCTGGC+AGG | 0.501469 | 2_1:-73836949 | None:intergenic |
ATTATACTGAGGGTAAATCT+TGG | 0.508478 | 2_1:-73833089 | None:intergenic |
GCAGCAGGAGTACCAGGAGC+AGG | 0.512995 | 2_1:-73832947 | None:intergenic |
TGCTATTATTAGCTTCATTG+AGG | 0.513608 | 2_1:+73834633 | Msa0224100:CDS |
GCATTTAAGTCAGAACCATT+GGG | 0.513681 | 2_1:-73834613 | None:intergenic |
CTCAGAAAGAGAAGAGAGAT+GGG | 0.513728 | 2_1:+73832475 | Msa0224100:exon |
CTCCGCGTCAGCAAGTCTGC+AGG | 0.514816 | 2_1:-73837014 | None:intergenic |
CACTAGGTGCAAAGTTAAGA+AGG | 0.516076 | 2_1:+73835653 | Msa0224100:CDS |
CCGTTCCAATATTGATCTCA+AGG | 0.518952 | 2_1:+73832621 | Msa0224100:CDS |
GGAGAAGGAGTAGCATTGCT+TGG | 0.518958 | 2_1:-73832920 | None:intergenic |
GGTGTAGCAGCAACATTGAC+CGG | 0.528722 | 2_1:-73833004 | None:intergenic |
CTCCCAAGGGTAAACCATCT+GGG | 0.529021 | 2_1:+73832885 | Msa0224100:CDS |
CCAAAAGAAATGGACCTGCC+AGG | 0.529549 | 2_1:+73836935 | Msa0224100:CDS |
GCTCAGAAAGAGAAGAGAGA+TGG | 0.531225 | 2_1:+73832474 | Msa0224100:exon |
CAAAATTTCAGAAGGACACT+AGG | 0.531519 | 2_1:+73835637 | Msa0224100:CDS |
TTTGGCTACTGCAGCAGTCA+GGG | 0.538485 | 2_1:+73837048 | Msa0224100:CDS |
CAGTCAAGGGAAACTTGAAA+AGG | 0.538946 | 2_1:+73835681 | Msa0224100:CDS |
GAAGAAGAAGCTCTGCATCA+AGG | 0.542831 | 2_1:+73832526 | Msa0224100:CDS |
CTCAAAGTCAAAATTTCAGA+AGG | 0.543098 | 2_1:+73835629 | Msa0224100:CDS |
CTCAAAGGAACTTGAAACAA+AGG | 0.548952 | 2_1:-73837389 | None:intergenic |
TGGGAAATCAGAAGCAGAAG+TGG | 0.548959 | 2_1:+73832494 | Msa0224100:CDS |
AAGATAAAGGACACCTCAGT+GGG | 0.554986 | 2_1:+73836878 | Msa0224100:CDS |
GGAGTACCAGGAGCAGGAGA+CGG | 0.555301 | 2_1:-73832941 | None:intergenic |
TTAAGAAGGCTTGTCAGTCA+AGG | 0.558246 | 2_1:+73835667 | Msa0224100:CDS |
TGTCATAACTTGACATGTGT+TGG | 0.558378 | 2_1:+73837512 | Msa0224100:three_prime_UTR |
TTGACTAGTCTATTAGTACT+CGG | 0.562653 | 2_1:+73832408 | None:intergenic |
GGTGTTCAGAAATATGGTGC+TGG | 0.564792 | 2_1:+73832547 | Msa0224100:CDS |
CCAGGAGCAGGAGACGGAGA+AGG | 0.566651 | 2_1:-73832935 | None:intergenic |
TAAGAAGGCTTGTCAGTCAA+GGG | 0.572247 | 2_1:+73835668 | Msa0224100:CDS |
TGTCATCATTCTGAGAAGGC+TGG | 0.574703 | 2_1:-73833060 | None:intergenic |
CGAATCGGAGTCTGAGCTTG+AGG | 0.575521 | 2_1:-73833025 | None:intergenic |
CAAAAGAAATGGACCTGCCA+GGG | 0.589349 | 2_1:+73836936 | Msa0224100:CDS |
TCAAAACCCTAAAACTCCCA+AGG | 0.596857 | 2_1:+73832871 | Msa0224100:CDS |
TCTGTGATGGCAGGTATGCT+CGG | 0.596964 | 2_1:+73837232 | Msa0224100:intron |
TGGCTAGTAGGAGTCCGAAT+CGG | 0.600441 | 2_1:-73833040 | None:intergenic |
AAGATATTCAAAGTTTGGGG+AGG | 0.610909 | 2_1:+73837078 | Msa0224100:CDS |
GCATTGTCATCATTCTGAGA+AGG | 0.619580 | 2_1:-73833064 | None:intergenic |
AGCCTGCAGACTTGCTGACG+CGG | 0.625031 | 2_1:+73837012 | Msa0224100:CDS |
AGAAAGATATTCAAAGTTTG+GGG | 0.625477 | 2_1:+73837075 | Msa0224100:CDS |
GCAAAATTATTAGATGACCC+TGG | 0.640236 | 2_1:-73836953 | None:intergenic |
CCTTGAGATCAATATTGGAA+CGG | 0.643002 | 2_1:-73832621 | None:intergenic |
CAAAACCCTAAAACTCCCAA+GGG | 0.647393 | 2_1:+73832872 | Msa0224100:CDS |
TCAACAATCAAGGATCCCAA+TGG | 0.653809 | 2_1:+73834598 | Msa0224100:CDS |
GGAGCAGGAGAAGACCCAGA+TGG | 0.666811 | 2_1:-73832899 | None:intergenic |
GATAAAGGACACCTCAGTGG+GGG | 0.678712 | 2_1:+73836880 | Msa0224100:CDS |
CAAGATAAAGGACACCTCAG+TGG | 0.681785 | 2_1:+73836877 | Msa0224100:CDS |
AGATAAAGGACACCTCAGTG+GGG | 0.739882 | 2_1:+73836879 | Msa0224100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACATTTTTTTTTTTTTGAA+AGG | + | chr2_1:73834997-73835016 | Msa0224100:intron | 10.0% |
!! | ATCATATAATATCAATATAA+AGG | - | chr2_1:73836094-73836113 | None:intergenic | 10.0% |
!!! | AAAGGTTTAAATTTTTTATT+GGG | - | chr2_1:73837374-73837393 | None:intergenic | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:73837351-73837370 | None:intergenic | 100.0% |
!! | ACAGTAAGTAATATAATTTA+GGG | + | chr2_1:73833312-73833331 | Msa0224100:intron | 15.0% |
!! | AACAAAAATAAGATATATCA+TGG | - | chr2_1:73834491-73834510 | None:intergenic | 15.0% |
!!! | TTGTACTTTTTATTTTTATC+AGG | + | chr2_1:73834548-73834567 | Msa0224100:intron | 15.0% |
!!! | TTTTTGTTTTATACTTTTTG+AGG | + | chr2_1:73835567-73835586 | Msa0224100:intron | 15.0% |
!! | ATAATATCAATATAAAGGAA+AGG | - | chr2_1:73836089-73836108 | None:intergenic | 15.0% |
!!! | AAGGTTTAAATTTTTTATTG+GGG | - | chr2_1:73837373-73837392 | None:intergenic | 15.0% |
!!! | CAAAGGTTTAAATTTTTTAT+TGG | - | chr2_1:73837375-73837394 | None:intergenic | 15.0% |
!!! | TTTTGTGTTACTTTTTTTTT+TGG | + | chr2_1:73837420-73837439 | Msa0224100:three_prime_UTR | 15.0% |
!!! | TTTGTGTTACTTTTTTTTTT+GGG | + | chr2_1:73837421-73837440 | Msa0224100:three_prime_UTR | 15.0% |
!!! | TTTTTTTTTGGGAATAAAAT+TGG | + | chr2_1:73837432-73837451 | Msa0224100:three_prime_UTR | 15.0% |
!! | AATTTCACAAAAACATAAAC+TGG | - | chr2_1:73832674-73832693 | None:intergenic | 20.0% |
!! | GACAGTAAGTAATATAATTT+AGG | + | chr2_1:73833311-73833330 | Msa0224100:intron | 20.0% |
!! | ATGGTAAGTTATATGATTTA+GGG | + | chr2_1:73833383-73833402 | Msa0224100:intron | 20.0% |
!! | ACAAAATACTGAATTATGAA+TGG | + | chr2_1:73833698-73833717 | Msa0224100:intron | 20.0% |
!! | CAAAATACTGAATTATGAAT+GGG | + | chr2_1:73833699-73833718 | Msa0224100:intron | 20.0% |
!! | AAAATACTGAATTATGAATG+GGG | + | chr2_1:73833700-73833719 | Msa0224100:intron | 20.0% |
!!! | CACATTCTTATTATACATTT+TGG | - | chr2_1:73833889-73833908 | None:intergenic | 20.0% |
!!! | TGTGTTTTTTTAAAGATGAA+GGG | + | chr2_1:73834285-73834304 | Msa0224100:intron | 20.0% |
!! | ATAATATGTTCTTAATTGAC+AGG | - | chr2_1:73834518-73834537 | None:intergenic | 20.0% |
!! | TCAATTAAGAACATATTATG+AGG | + | chr2_1:73834519-73834538 | Msa0224100:intron | 20.0% |
!! | CAATTAAGAACATATTATGA+GGG | + | chr2_1:73834520-73834539 | Msa0224100:intron | 20.0% |
!!! | TTTGACATTTATTTTTACAC+CGG | + | chr2_1:73835319-73835338 | Msa0224100:intron | 20.0% |
!!! | AAATATGCAATTTTTACATG+TGG | - | chr2_1:73835382-73835401 | None:intergenic | 20.0% |
!!! | ACACAATCTCAAATTTTATT+TGG | - | chr2_1:73835408-73835427 | None:intergenic | 20.0% |
!!! | CTTTTTGATCTTTTAAATGT+GGG | + | chr2_1:73835523-73835542 | Msa0224100:intron | 20.0% |
!! | AATTTATTTACGAGTAGATA+GGG | - | chr2_1:73837166-73837185 | None:intergenic | 20.0% |
!! | AAATTTATTTACGAGTAGAT+AGG | - | chr2_1:73837167-73837186 | None:intergenic | 20.0% |
!!! | TTTTGTTTCAACATTTAAAC+TGG | + | chr2_1:73837298-73837317 | Msa0224100:three_prime_UTR | 20.0% |
!!! | AGGTTTAAATTTTTTATTGG+GGG | - | chr2_1:73837372-73837391 | None:intergenic | 20.0% |
!! | AAAAAGTAACACAAAAACAT+TGG | - | chr2_1:73837416-73837435 | None:intergenic | 20.0% |
!!! | AAGTGGTTTTTTTTCTATAT+AGG | + | chr2_1:73837470-73837489 | Msa0224100:three_prime_UTR | 20.0% |
!!! | TTTTTTTCTATATAGGAGAT+TGG | + | chr2_1:73837477-73837496 | Msa0224100:three_prime_UTR | 20.0% |
!!! | TTGTGATTGATTTTTTGTTC+AGG | + | chr2_1:73832817-73832836 | Msa0224100:intron | 25.0% |
!!! | GATTTTTTGTTCAGGATAAA+TGG | + | chr2_1:73832825-73832844 | Msa0224100:intron | 25.0% |
! | ACAAAATTGCATAAAGAAAG+GGG | - | chr2_1:73833121-73833140 | None:intergenic | 25.0% |
! | CACAAAATTGCATAAAGAAA+GGG | - | chr2_1:73833122-73833141 | None:intergenic | 25.0% |
! | TCACAAAATTGCATAAAGAA+AGG | - | chr2_1:73833123-73833142 | None:intergenic | 25.0% |
! | CATATAACTTACCATCAAAT+TGG | - | chr2_1:73833378-73833397 | None:intergenic | 25.0% |
! | GATGGTAAGTTATATGATTT+AGG | + | chr2_1:73833382-73833401 | Msa0224100:intron | 25.0% |
! | TATCCAATTTACTCTCAAAT+TGG | - | chr2_1:73833410-73833429 | None:intergenic | 25.0% |
! | TTTGCAAAAATTCAAAACCA+GGG | + | chr2_1:73833454-73833473 | Msa0224100:intron | 25.0% |
!! | TTTGCCTAATTGCAAATTTT+AGG | + | chr2_1:73833480-73833499 | Msa0224100:intron | 25.0% |
!! | TTGCCTAATTGCAAATTTTA+GGG | + | chr2_1:73833481-73833500 | Msa0224100:intron | 25.0% |
! | TTCAATTTCATTGGATGAAT+TGG | + | chr2_1:73833522-73833541 | Msa0224100:intron | 25.0% |
! | TAAATATACAATCCTTTCAG+AGG | - | chr2_1:73833746-73833765 | None:intergenic | 25.0% |
!!! | CTGCATAATTTTTTCACAAT+AGG | - | chr2_1:73833800-73833819 | None:intergenic | 25.0% |
!!! | AATTTTTCAAATGAGATGGA+GGG | - | chr2_1:73833990-73834009 | None:intergenic | 25.0% |
!!! | TAATTTTTCAAATGAGATGG+AGG | - | chr2_1:73833991-73834010 | None:intergenic | 25.0% |
!!! | GAGTAATTTTTCAAATGAGA+TGG | - | chr2_1:73833994-73834013 | None:intergenic | 25.0% |
! | TATGGGATATAATTGTATCA+TGG | - | chr2_1:73834064-73834083 | None:intergenic | 25.0% |
! | GAGACAAATTAACAATAGAT+GGG | + | chr2_1:73834087-73834106 | Msa0224100:intron | 25.0% |
! | AGACAAATTAACAATAGATG+GGG | + | chr2_1:73834088-73834107 | Msa0224100:intron | 25.0% |
! | CTATGAATTAAATGGAGAAT+TGG | - | chr2_1:73834227-73834246 | None:intergenic | 25.0% |
! | TCCATTTAATTCATAGAAAG+TGG | + | chr2_1:73834231-73834250 | Msa0224100:intron | 25.0% |
!!! | CTGTGTTTTTTTAAAGATGA+AGG | + | chr2_1:73834284-73834303 | Msa0224100:intron | 25.0% |
!!! | AAAGTGTTCTGATTTTAACA+TGG | + | chr2_1:73834340-73834359 | Msa0224100:intron | 25.0% |
!! | TTTTATCAGGTACAATTCAT+TGG | + | chr2_1:73834561-73834580 | Msa0224100:intron | 25.0% |
! | TACTTATGATCACTATTTAG+TGG | + | chr2_1:73834697-73834716 | Msa0224100:intron | 25.0% |
! | AAAGATCTTAGATTGAATTG+CGG | + | chr2_1:73834782-73834801 | Msa0224100:intron | 25.0% |
! | AATATGTAACGTCAATCATT+TGG | + | chr2_1:73834950-73834969 | Msa0224100:intron | 25.0% |
! | ATATGTAACGTCAATCATTT+GGG | + | chr2_1:73834951-73834970 | Msa0224100:intron | 25.0% |
! | AGAGGGACTAAAATAAAAAA+TGG | + | chr2_1:73835204-73835223 | Msa0224100:intron | 25.0% |
! | GAGGGACTAAAATAAAAAAT+GGG | + | chr2_1:73835205-73835224 | Msa0224100:intron | 25.0% |
! | TAAAAAATGGGTATCTATAG+AGG | + | chr2_1:73835217-73835236 | Msa0224100:intron | 25.0% |
! | AAAAAATGGGTATCTATAGA+GGG | + | chr2_1:73835218-73835237 | Msa0224100:intron | 25.0% |
!!! | TGAATTGATTTTAAACTCTC+CGG | - | chr2_1:73835341-73835360 | None:intergenic | 25.0% |
! | AAAATCAATTCATCAACTCA+AGG | + | chr2_1:73835349-73835368 | Msa0224100:intron | 25.0% |
!! | GCTTTTTGATCTTTTAAATG+TGG | + | chr2_1:73835522-73835541 | Msa0224100:intron | 25.0% |
!!! | ATTTCTTTAAAGCATTACAG+AGG | - | chr2_1:73835716-73835735 | None:intergenic | 25.0% |
!!! | GTTAGTTACTTATTTCTGTT+TGG | + | chr2_1:73835834-73835853 | Msa0224100:intron | 25.0% |
!! | TTTTTGAATTTCTGTCACAT+AGG | + | chr2_1:73835972-73835991 | Msa0224100:intron | 25.0% |
! | ACAATAATTTCTTCAGCAAT+GGG | - | chr2_1:73836133-73836152 | None:intergenic | 25.0% |
! | GATAAGGATAACGAATAAAA+AGG | - | chr2_1:73836184-73836203 | None:intergenic | 25.0% |
!!! | TATTTCTCACTGATTTTTTC+CGG | + | chr2_1:73836279-73836298 | Msa0224100:intron | 25.0% |
!!! | TTTTACTCTGTTACTTCTAA+TGG | + | chr2_1:73836400-73836419 | Msa0224100:intron | 25.0% |
! | TACTCAAATAAACACAAACA+CGG | - | chr2_1:73836566-73836585 | None:intergenic | 25.0% |
!! | GTGTTTATTTGAGTATGTTT+TGG | + | chr2_1:73836571-73836590 | Msa0224100:intron | 25.0% |
! | ACAAAATGGTTACAAGATAA+AGG | + | chr2_1:73836865-73836884 | Msa0224100:CDS | 25.0% |
! | ACAGAAAGATATTCAAAGTT+TGG | + | chr2_1:73837073-73837092 | Msa0224100:CDS | 25.0% |
! | CAGAAAGATATTCAAAGTTT+GGG | + | chr2_1:73837074-73837093 | Msa0224100:CDS | 25.0% |
! | AGAAAGATATTCAAAGTTTG+GGG | + | chr2_1:73837075-73837094 | Msa0224100:CDS | 25.0% |
! | TTACTTGCATAACTTATAGT+TGG | - | chr2_1:73837191-73837210 | None:intergenic | 25.0% |
!! | TAAAATGACCATTGTTCTTT+TGG | + | chr2_1:73837208-73837227 | Msa0224100:intron | 25.0% |
! | TGTTGAAACAAAAACACTAT+AGG | - | chr2_1:73837291-73837310 | None:intergenic | 25.0% |
!! | TAAAAACATTTTTCACTGGA+TGG | - | chr2_1:73837325-73837344 | None:intergenic | 25.0% |
!!! | TTTAAATTTTTTATTGGGGG+GGG | - | chr2_1:73837369-73837388 | None:intergenic | 25.0% |
!!! | GTTTAAATTTTTTATTGGGG+GGG | - | chr2_1:73837370-73837389 | None:intergenic | 25.0% |
!!! | GGTTTAAATTTTTTATTGGG+GGG | - | chr2_1:73837371-73837390 | None:intergenic | 25.0% |
! | TTTTTGTTCAGGATAAATGG+CGG | + | chr2_1:73832828-73832847 | Msa0224100:intron | 30.0% |
ATTATACTGAGGGTAAATCT+TGG | - | chr2_1:73833092-73833111 | None:intergenic | 30.0% | |
TGTAAACAAACAAATTCAGG+GGG | - | chr2_1:73833211-73833230 | None:intergenic | 30.0% | |
GTGTAAACAAACAAATTCAG+GGG | - | chr2_1:73833212-73833231 | None:intergenic | 30.0% | |
GGTGTAAACAAACAAATTCA+GGG | - | chr2_1:73833213-73833232 | None:intergenic | 30.0% | |
AGGTGTAAACAAACAAATTC+AGG | - | chr2_1:73833214-73833233 | None:intergenic | 30.0% | |
TGCTCTATTCGTAAATTTCA+AGG | - | chr2_1:73833234-73833253 | None:intergenic | 30.0% | |
GTTTGCAAAAATTCAAAACC+AGG | + | chr2_1:73833453-73833472 | Msa0224100:intron | 30.0% | |
! | TGCCTAATTGCAAATTTTAG+GGG | + | chr2_1:73833482-73833501 | Msa0224100:intron | 30.0% |
!! | ATTTTAGGGGTGTAAATGTT+CGG | + | chr2_1:73833495-73833514 | Msa0224100:intron | 30.0% |
TTCATCCAATGAAATTGAAG+AGG | - | chr2_1:73833521-73833540 | None:intergenic | 30.0% | |
TGGTGATTTACTCTTTGATT+TGG | + | chr2_1:73833542-73833561 | Msa0224100:intron | 30.0% | |
!! | TTTACTCTTTGATTTGGTAC+TGG | + | chr2_1:73833548-73833567 | Msa0224100:intron | 30.0% |
! | GATAAAAGTACGAGTTTGAT+AGG | + | chr2_1:73833570-73833589 | Msa0224100:intron | 30.0% |
CTTGATCCAACAATCAAAAT+CGG | - | chr2_1:73833836-73833855 | None:intergenic | 30.0% | |
TTTGATTGTTGGATCAAGAT+TGG | + | chr2_1:73833838-73833857 | Msa0224100:intron | 30.0% | |
ACCATCTGATTAAGATCATA+AGG | - | chr2_1:73833914-73833933 | None:intergenic | 30.0% | |
!! | ATTTTTCAAATGAGATGGAG+GGG | - | chr2_1:73833989-73834008 | None:intergenic | 30.0% |
TGAAAAATTACTCTTCACCA+AGG | + | chr2_1:73834001-73834020 | Msa0224100:intron | 30.0% | |
GAAAAATTACTCTTCACCAA+GGG | + | chr2_1:73834002-73834021 | Msa0224100:intron | 30.0% | |
TCTTCAAAAAGAAAATCCCT+TGG | - | chr2_1:73834021-73834040 | None:intergenic | 30.0% | |
ATTGTATCATGGCATTTCTT+TGG | - | chr2_1:73834053-73834072 | None:intergenic | 30.0% | |
!! | TGTTAATTTGTCTCGAGTAT+GGG | - | chr2_1:73834081-73834100 | None:intergenic | 30.0% |
!! | TTGTTAATTTGTCTCGAGTA+TGG | - | chr2_1:73834082-73834101 | None:intergenic | 30.0% |
CGAGACAAATTAACAATAGA+TGG | + | chr2_1:73834086-73834105 | Msa0224100:intron | 30.0% | |
GACAAATTAACAATAGATGG+GGG | + | chr2_1:73834089-73834108 | Msa0224100:intron | 30.0% | |
ACAAATTAACAATAGATGGG+GGG | + | chr2_1:73834090-73834109 | Msa0224100:intron | 30.0% | |
!! | GGTAGCAAATTGTTTTATTG+TGG | - | chr2_1:73834178-73834197 | None:intergenic | 30.0% |
! | GCCACTTTCTATGAATTAAA+TGG | - | chr2_1:73834235-73834254 | None:intergenic | 30.0% |
ATTCATAGAAAGTGGCAAAT+AGG | + | chr2_1:73834239-73834258 | Msa0224100:intron | 30.0% | |
!! | TTTTTAAAGATGAAGGGCTT+AGG | + | chr2_1:73834291-73834310 | Msa0224100:intron | 30.0% |
!! | TTTTAAAGATGAAGGGCTTA+GGG | + | chr2_1:73834292-73834311 | Msa0224100:intron | 30.0% |
! | TGCTATTATTAGCTTCATTG+AGG | + | chr2_1:73834633-73834652 | Msa0224100:CDS | 30.0% |
!!! | CATCAAAAGTGTTTTCCTTT+TGG | + | chr2_1:73834890-73834909 | Msa0224100:intron | 30.0% |
!!! | TTTTTTTTGAAAGGCGATTG+TGG | + | chr2_1:73835006-73835025 | Msa0224100:intron | 30.0% |
! | ATAAGTGTTGCCAAATAAGA+AGG | - | chr2_1:73835110-73835129 | None:intergenic | 30.0% |
TCAACCTATAATGTATCAGA+GGG | + | chr2_1:73835187-73835206 | Msa0224100:intron | 30.0% | |
!! | AATTTCCTTGCTTTTGTGTT+CGG | + | chr2_1:73835431-73835450 | Msa0224100:intron | 30.0% |
!!! | CTTCTGAAATTTTGACTTTG+AGG | - | chr2_1:73835631-73835650 | None:intergenic | 30.0% |
CTCAAAGTCAAAATTTCAGA+AGG | + | chr2_1:73835629-73835648 | Msa0224100:CDS | 30.0% | |
! | ACACACTATAAAGGAGTATA+AGG | - | chr2_1:73835774-73835793 | None:intergenic | 30.0% |
AAAGAAAGTGACAGAAAATG+AGG | - | chr2_1:73836017-73836036 | None:intergenic | 30.0% | |
AATATAAAGGAAAGGCTTCA+AGG | - | chr2_1:73836081-73836100 | None:intergenic | 30.0% | |
CAATAATTTCTTCAGCAATG+GGG | - | chr2_1:73836132-73836151 | None:intergenic | 30.0% | |
GACAATAATTTCTTCAGCAA+TGG | - | chr2_1:73836134-73836153 | None:intergenic | 30.0% | |
AAGGATCCAGAAAGAAATTA+TGG | - | chr2_1:73836165-73836184 | None:intergenic | 30.0% | |
TAACAAGTATGAAGTCAACA+AGG | - | chr2_1:73836213-73836232 | None:intergenic | 30.0% | |
! | ACTTCATACTTGTTAGATGT+GGG | + | chr2_1:73836218-73836237 | Msa0224100:intron | 30.0% |
!! | CAAGCAAAATGAAGCATTTT+TGG | - | chr2_1:73836352-73836371 | None:intergenic | 30.0% |
ACATAGAACATACAACATTG+AGG | - | chr2_1:73836375-73836394 | None:intergenic | 30.0% | |
! | AACTGTGAGGACATTTTATT+TGG | + | chr2_1:73836500-73836519 | Msa0224100:intron | 30.0% |
ACTCAAATAAACACAAACAC+GGG | - | chr2_1:73836565-73836584 | None:intergenic | 30.0% | |
! | ACTCTTTCTTTTTCTGCTAT+TGG | - | chr2_1:73836605-73836624 | None:intergenic | 30.0% |
AAGATTGAACGTGTGTAAAA+TGG | + | chr2_1:73836710-73836729 | Msa0224100:intron | 30.0% | |
! | CGTCTAAAAACATTTTTCAC+TGG | - | chr2_1:73837329-73837348 | None:intergenic | 30.0% |
!!! | TTAAATTTTTTATTGGGGGG+GGG | - | chr2_1:73837368-73837387 | None:intergenic | 30.0% |
! | CATCAAGGTGTTCAGAAATA+TGG | + | chr2_1:73832541-73832560 | Msa0224100:CDS | 35.0% |
! | AGAAATATGGTGCTGGAAAA+TGG | + | chr2_1:73832554-73832573 | Msa0224100:CDS | 35.0% |
!! | CGAGTTTTTGACTGAATTGA+GGG | - | chr2_1:73832597-73832616 | None:intergenic | 35.0% |
CCTTGAGATCAATATTGGAA+CGG | - | chr2_1:73832624-73832643 | None:intergenic | 35.0% | |
ACGAACCTTGAGATCAATAT+TGG | - | chr2_1:73832629-73832648 | None:intergenic | 35.0% | |
! | TCGTTTTGTCTTCCTTAATC+AGG | + | chr2_1:73832645-73832664 | Msa0224100:intron | 35.0% |
! | CGTTTTGTCTTCCTTAATCA+GGG | + | chr2_1:73832646-73832665 | Msa0224100:intron | 35.0% |
ATAAACCCTAACCCTGATTA+AGG | - | chr2_1:73832660-73832679 | None:intergenic | 35.0% | |
! | CGGAATTTGAATGTTTTTCC+TGG | + | chr2_1:73832848-73832867 | Msa0224100:CDS | 35.0% |
TTGCATAAAGAAAGGGGAAA+AGG | - | chr2_1:73833115-73833134 | None:intergenic | 35.0% | |
TTGTGTGTGGTTGTTTGATT+TGG | + | chr2_1:73833168-73833187 | Msa0224100:intron | 35.0% | |
!! | GATCTTTCTGTTGACTTGTA+AGG | + | chr2_1:73833280-73833299 | Msa0224100:intron | 35.0% |
GGACCAATTTGAGAGTAAAT+TGG | + | chr2_1:73833404-73833423 | Msa0224100:intron | 35.0% | |
CACCCCTAAAATTTGCAATT+AGG | - | chr2_1:73833487-73833506 | None:intergenic | 35.0% | |
ATGAGTTCTCATTAGATGTC+GGG | - | chr2_1:73833625-73833644 | None:intergenic | 35.0% | |
GATGAGTTCTCATTAGATGT+CGG | - | chr2_1:73833626-73833645 | None:intergenic | 35.0% | |
GCTTGTGTGGCAATAATAAT+AGG | - | chr2_1:73833648-73833667 | None:intergenic | 35.0% | |
GATTACAAAATCAGCTTGTG+TGG | - | chr2_1:73833661-73833680 | None:intergenic | 35.0% | |
TACTGAATTATGAATGGGGT+TGG | + | chr2_1:73833704-73833723 | Msa0224100:intron | 35.0% | |
AATCCTTTCAGAGGAAAAAG+GGG | - | chr2_1:73833737-73833756 | None:intergenic | 35.0% | |
CAATCCTTTCAGAGGAAAAA+GGG | - | chr2_1:73833738-73833757 | None:intergenic | 35.0% | |
ACAATCCTTTCAGAGGAAAA+AGG | - | chr2_1:73833739-73833758 | None:intergenic | 35.0% | |
!!! | TGTCATCCGATTTTGATTGT+TGG | + | chr2_1:73833827-73833846 | Msa0224100:intron | 35.0% |
GGACTCAAAGTTAACAAAGT+GGG | - | chr2_1:73833868-73833887 | None:intergenic | 35.0% | |
TGGACTCAAAGTTAACAAAG+TGG | - | chr2_1:73833869-73833888 | None:intergenic | 35.0% | |
GCCTTATGATCTTAATCAGA+TGG | + | chr2_1:73833910-73833929 | Msa0224100:intron | 35.0% | |
TGCATGATTGCATGAGTATA+TGG | + | chr2_1:73833947-73833966 | Msa0224100:intron | 35.0% | |
!! | TTTTTCAAATGAGATGGAGG+GGG | - | chr2_1:73833988-73834007 | None:intergenic | 35.0% |
ATAGAAAGTGGCAAATAGGT+GGG | + | chr2_1:73834243-73834262 | Msa0224100:intron | 35.0% | |
TGAAGCTCTATCAACAATCA+AGG | + | chr2_1:73834588-73834607 | Msa0224100:CDS | 35.0% | |
GCATTTAAGTCAGAACCATT+GGG | - | chr2_1:73834616-73834635 | None:intergenic | 35.0% | |
AGCATTTAAGTCAGAACCAT+TGG | - | chr2_1:73834617-73834636 | None:intergenic | 35.0% | |
! | TTATTAGCTTCATTGAGGTG+AGG | + | chr2_1:73834638-73834657 | Msa0224100:intron | 35.0% |
TGGGAGTCATAAAACCTAAT+TGG | - | chr2_1:73834812-73834831 | None:intergenic | 35.0% | |
!!! | CAAAAGTGTTTTCCTTTTGG+TGG | + | chr2_1:73834893-73834912 | Msa0224100:intron | 35.0% |
CAAAATACCTTTCCACCAAA+AGG | - | chr2_1:73834908-73834927 | None:intergenic | 35.0% | |
GTACAGTATGCATTTGATTG+TGG | + | chr2_1:73834973-73834992 | Msa0224100:intron | 35.0% | |
GGCAACAAATTGATACGAAT+TGG | + | chr2_1:73835027-73835046 | Msa0224100:intron | 35.0% | |
AAGTTAAAGGTAGTTAGTCG+GGG | - | chr2_1:73835157-73835176 | None:intergenic | 35.0% | |
GAAGTTAAAGGTAGTTAGTC+GGG | - | chr2_1:73835158-73835177 | None:intergenic | 35.0% | |
GGAAGTTAAAGGTAGTTAGT+CGG | - | chr2_1:73835159-73835178 | None:intergenic | 35.0% | |
! | CTAACTACCTTTAACTTCCT+CGG | + | chr2_1:73835160-73835179 | Msa0224100:intron | 35.0% |
! | TAACTACCTTTAACTTCCTC+GGG | + | chr2_1:73835161-73835180 | Msa0224100:intron | 35.0% |
CTCTGATACATTATAGGTTG+AGG | - | chr2_1:73835188-73835207 | None:intergenic | 35.0% | |
CTCAACCTATAATGTATCAG+AGG | + | chr2_1:73835186-73835205 | Msa0224100:intron | 35.0% | |
TAGTCCCTCTGATACATTAT+AGG | - | chr2_1:73835194-73835213 | None:intergenic | 35.0% | |
!! | ATTTCCTTGCTTTTGTGTTC+GGG | + | chr2_1:73835432-73835451 | Msa0224100:intron | 35.0% |
! | GATTCCTTTTTATGGGAGTT+GGG | + | chr2_1:73835457-73835476 | Msa0224100:intron | 35.0% |
! | ATTCCTTTTTATGGGAGTTG+GGG | + | chr2_1:73835458-73835477 | Msa0224100:intron | 35.0% |
! | AGATCAAAAAGCACGATAGA+TGG | - | chr2_1:73835514-73835533 | None:intergenic | 35.0% |
CAAAATTTCAGAAGGACACT+AGG | + | chr2_1:73835637-73835656 | Msa0224100:CDS | 35.0% | |
ACACTAAGCACACACTATAA+AGG | - | chr2_1:73835783-73835802 | None:intergenic | 35.0% | |
GAGTTAAGTCAGTTTACTCT+TGG | + | chr2_1:73835884-73835903 | Msa0224100:intron | 35.0% | |
CAATGGGGATCACTAATATA+GGG | - | chr2_1:73836117-73836136 | None:intergenic | 35.0% | |
GAAAGAAATTATGGAGTAGC+AGG | - | chr2_1:73836156-73836175 | None:intergenic | 35.0% | |
GCTACTCCATAATTTCTTTC+TGG | + | chr2_1:73836156-73836175 | Msa0224100:intron | 35.0% | |
GTCAACAAGGTAACATGATA+AGG | - | chr2_1:73836200-73836219 | None:intergenic | 35.0% | |
! | GACTTCATACTTGTTAGATG+TGG | + | chr2_1:73836217-73836236 | Msa0224100:intron | 35.0% |
ATGTCTAACATGAAAATCGC+CGG | - | chr2_1:73836301-73836320 | None:intergenic | 35.0% | |
! | CTCTGTTACTTCTAATGGTT+TGG | + | chr2_1:73836405-73836424 | Msa0224100:intron | 35.0% |
! | TGTTACTTCTAATGGTTTGG+AGG | + | chr2_1:73836408-73836427 | Msa0224100:intron | 35.0% |
GGAGGAAAAAAAATTGCTCT+AGG | + | chr2_1:73836426-73836445 | Msa0224100:intron | 35.0% | |
!! | GCTCTAGGATTAATTGTAAC+AGG | + | chr2_1:73836441-73836460 | Msa0224100:intron | 35.0% |
!! | GACATTTTATTTGGAATCCC+AGG | + | chr2_1:73836509-73836528 | Msa0224100:intron | 35.0% |
! | TTTATTTGGAATCCCAGGTT+CGG | + | chr2_1:73836514-73836533 | Msa0224100:intron | 35.0% |
CTCAAATAAACACAAACACG+GGG | - | chr2_1:73836564-73836583 | None:intergenic | 35.0% | |
ACTACCTACACCAAAAGAAA+TGG | + | chr2_1:73836925-73836944 | Msa0224100:CDS | 35.0% | |
GCAAAATTATTAGATGACCC+TGG | - | chr2_1:73836956-73836975 | None:intergenic | 35.0% | |
! | TGCATATGATGATGCCATAA+AGG | + | chr2_1:73836973-73836992 | Msa0224100:CDS | 35.0% |
AAGATATTCAAAGTTTGGGG+AGG | + | chr2_1:73837078-73837097 | Msa0224100:CDS | 35.0% | |
TCACAGAACCAAAAGAACAA+TGG | - | chr2_1:73837219-73837238 | None:intergenic | 35.0% | |
!!! | TTGTTCTTTTGGTTCTGTGA+TGG | + | chr2_1:73837219-73837238 | Msa0224100:intron | 35.0% |
ACTGTTCGCTTCACTTAATT+TGG | + | chr2_1:73837259-73837278 | Msa0224100:exon | 35.0% | |
!!! | TAAATTTTTTATTGGGGGGG+GGG | - | chr2_1:73837367-73837386 | None:intergenic | 35.0% |
CTCAAAGGAACTTGAAACAA+AGG | - | chr2_1:73837392-73837411 | None:intergenic | 35.0% | |
! | CACAAAAACATTGGTCTCAA+AGG | - | chr2_1:73837407-73837426 | None:intergenic | 35.0% |
!!! | GGTCTTTAGTTTTGTGAAAG+TGG | + | chr2_1:73837453-73837472 | Msa0224100:three_prime_UTR | 35.0% |
TGTCATAACTTGACATGTGT+TGG | + | chr2_1:73837512-73837531 | Msa0224100:three_prime_UTR | 35.0% | |
CTCAGAAAGAGAAGAGAGAT+GGG | + | chr2_1:73832475-73832494 | Msa0224100:exon | 40.0% | |
!! | GCGAGTTTTTGACTGAATTG+AGG | - | chr2_1:73832598-73832617 | None:intergenic | 40.0% |
CCGTTCCAATATTGATCTCA+AGG | + | chr2_1:73832621-73832640 | Msa0224100:CDS | 40.0% | |
TGTCTTCCTTAATCAGGGTT+AGG | + | chr2_1:73832651-73832670 | Msa0224100:intron | 40.0% | |
GTCTTCCTTAATCAGGGTTA+GGG | + | chr2_1:73832652-73832671 | Msa0224100:intron | 40.0% | |
TCAAAACCCTAAAACTCCCA+AGG | + | chr2_1:73832871-73832890 | Msa0224100:CDS | 40.0% | |
CAAAACCCTAAAACTCCCAA+GGG | + | chr2_1:73832872-73832891 | Msa0224100:CDS | 40.0% | |
! | GTTTACCCTTGGGAGTTTTA+GGG | - | chr2_1:73832880-73832899 | None:intergenic | 40.0% |
! | GCATTGTCATCATTCTGAGA+AGG | - | chr2_1:73833067-73833086 | None:intergenic | 40.0% |
GGGGAAAAGGATTATACTGA+GGG | - | chr2_1:73833102-73833121 | None:intergenic | 40.0% | |
AGGGGAAAAGGATTATACTG+AGG | - | chr2_1:73833103-73833122 | None:intergenic | 40.0% | |
ATTTGTGCGCAAATTGTGTG+TGG | + | chr2_1:73833155-73833174 | Msa0224100:intron | 40.0% | |
!! | TGTGGTTGTTTGATTTGGAG+TGG | + | chr2_1:73833173-73833192 | Msa0224100:intron | 40.0% |
AACAAATTCAGGGGGCAAAT+TGG | - | chr2_1:73833203-73833222 | None:intergenic | 40.0% | |
GACTTCAGAGACCAATTTGA+TGG | + | chr2_1:73833364-73833383 | Msa0224100:intron | 40.0% | |
TTCGGCCTCTTCAATTTCAT+TGG | + | chr2_1:73833513-73833532 | Msa0224100:intron | 40.0% | |
TGAGTTCTCATTAGATGTCG+GGG | - | chr2_1:73833624-73833643 | None:intergenic | 40.0% | |
AATTGGCACGTACCAATTCA+GGG | - | chr2_1:73834210-73834229 | None:intergenic | 40.0% | |
CATAGAAAGTGGCAAATAGG+TGG | + | chr2_1:73834242-73834261 | Msa0224100:intron | 40.0% | |
TCAACAATCAAGGATCCCAA+TGG | + | chr2_1:73834598-73834617 | Msa0224100:CDS | 40.0% | |
TCACAGCAAGTCAAGCATTT+GGG | - | chr2_1:73834831-73834850 | None:intergenic | 40.0% | |
ATCACAGCAAGTCAAGCATT+TGG | - | chr2_1:73834832-73834851 | None:intergenic | 40.0% | |
! | GTGTTTTCCTTTTGGTGGAA+AGG | + | chr2_1:73834898-73834917 | Msa0224100:intron | 40.0% |
ATTGGAATTGCAGTACTGTG+AGG | + | chr2_1:73835045-73835064 | Msa0224100:intron | 40.0% | |
AAGAAGGAAGGAGAGAGTTT+GGG | - | chr2_1:73835094-73835113 | None:intergenic | 40.0% | |
TAAGAAGGAAGGAGAGAGTT+TGG | - | chr2_1:73835095-73835114 | None:intergenic | 40.0% | |
CTCTCTCCTTCCTTCTTATT+TGG | + | chr2_1:73835097-73835116 | Msa0224100:intron | 40.0% | |
GTGTTGCCAAATAAGAAGGA+AGG | - | chr2_1:73835106-73835125 | None:intergenic | 40.0% | |
CAAAGCGACTGATATTGAAC+TGG | - | chr2_1:73835303-73835322 | None:intergenic | 40.0% | |
!! | TTCGGGTGGATTCCTTTTTA+TGG | + | chr2_1:73835449-73835468 | Msa0224100:intron | 40.0% |
!! | TCGGGTGGATTCCTTTTTAT+GGG | + | chr2_1:73835450-73835469 | Msa0224100:intron | 40.0% |
! | GGATTCCTTTTTATGGGAGT+TGG | + | chr2_1:73835456-73835475 | Msa0224100:intron | 40.0% |
TGCGAAGTAAGCTACATTTC+TGG | - | chr2_1:73835491-73835510 | None:intergenic | 40.0% | |
CACTAGGTGCAAAGTTAAGA+AGG | + | chr2_1:73835653-73835672 | Msa0224100:CDS | 40.0% | |
TTAAGAAGGCTTGTCAGTCA+AGG | + | chr2_1:73835667-73835686 | Msa0224100:CDS | 40.0% | |
TAAGAAGGCTTGTCAGTCAA+GGG | + | chr2_1:73835668-73835687 | Msa0224100:CDS | 40.0% | |
CAGTCAAGGGAAACTTGAAA+AGG | + | chr2_1:73835681-73835700 | Msa0224100:CDS | 40.0% | |
GATCCACTGTATTCCAAAGT+CGG | + | chr2_1:73835926-73835945 | Msa0224100:intron | 40.0% | |
!! | TAACCGACTTTGGAATACAG+TGG | - | chr2_1:73835932-73835951 | None:intergenic | 40.0% |
!! | ACGCATTGATTAACCGACTT+TGG | - | chr2_1:73835942-73835961 | None:intergenic | 40.0% |
GCAATGGGGATCACTAATAT+AGG | - | chr2_1:73836118-73836137 | None:intergenic | 40.0% | |
ACCACTTGACTGTAACAACA+GGG | - | chr2_1:73836478-73836497 | None:intergenic | 40.0% | |
AACCACTTGACTGTAACAAC+AGG | - | chr2_1:73836479-73836498 | None:intergenic | 40.0% | |
AGTCAAGTGGTTTAACTGTG+AGG | + | chr2_1:73836487-73836506 | Msa0224100:intron | 40.0% | |
AATAAACACAAACACGGGGA+GGG | - | chr2_1:73836560-73836579 | None:intergenic | 40.0% | |
AAATAAACACAAACACGGGG+AGG | - | chr2_1:73836561-73836580 | None:intergenic | 40.0% | |
!!! | TTGAGTATGTTTTGGCCACT+AGG | + | chr2_1:73836579-73836598 | Msa0224100:intron | 40.0% |
!! | TTTTTCTGCTATTGGCCTAG+TGG | - | chr2_1:73836597-73836616 | None:intergenic | 40.0% |
! | CACGTTCAATCTTTCTAGCA+TGG | - | chr2_1:73836703-73836722 | None:intergenic | 40.0% |
! | TGTAACCATTTTGTACCTGC+AGG | - | chr2_1:73836859-73836878 | None:intergenic | 40.0% |
AAGATAAAGGACACCTCAGT+GGG | + | chr2_1:73836878-73836897 | Msa0224100:CDS | 40.0% | |
!! | AGGTCCATTTCTTTTGGTGT+AGG | - | chr2_1:73836932-73836951 | None:intergenic | 40.0% |
AATTATTAGATGACCCTGGC+AGG | - | chr2_1:73836952-73836971 | None:intergenic | 40.0% | |
AGTTTCGGAAGCTTCCTTTA+TGG | - | chr2_1:73836990-73837009 | None:intergenic | 40.0% | |
!! | CGCGGAGAATAAGTCATTTT+TGG | + | chr2_1:73837030-73837049 | Msa0224100:CDS | 40.0% |
!!! | AAATTTTTTATTGGGGGGGG+GGG | - | chr2_1:73837366-73837385 | None:intergenic | 40.0% |
GCTCAGAAAGAGAAGAGAGA+TGG | + | chr2_1:73832474-73832493 | Msa0224100:exon | 45.0% | |
TGGGAAATCAGAAGCAGAAG+TGG | + | chr2_1:73832494-73832513 | Msa0224100:CDS | 45.0% | |
GAAGAAGAAGCTCTGCATCA+AGG | + | chr2_1:73832526-73832545 | Msa0224100:CDS | 45.0% | |
GGTGTTCAGAAATATGGTGC+TGG | + | chr2_1:73832547-73832566 | Msa0224100:CDS | 45.0% | |
!!! | GGAGTTTTAGGGTTTTGACC+AGG | - | chr2_1:73832869-73832888 | None:intergenic | 45.0% |
! | GGTTTACCCTTGGGAGTTTT+AGG | - | chr2_1:73832881-73832900 | None:intergenic | 45.0% |
! | TGTCATCATTCTGAGAAGGC+TGG | - | chr2_1:73833063-73833082 | None:intergenic | 45.0% |
TGCAATTAGGCAAAAGACCC+TGG | - | chr2_1:73833474-73833493 | None:intergenic | 45.0% | |
! | TGTCCCCTTTTTCCTCTGAA+AGG | + | chr2_1:73833731-73833750 | Msa0224100:intron | 45.0% |
! | AGGAAGCACGAATCACATGT+TGG | - | chr2_1:73833780-73833799 | None:intergenic | 45.0% |
! | GATGGAGGGGGTTTTCAATT+TGG | - | chr2_1:73833976-73833995 | None:intergenic | 45.0% |
ACTCCATTTGCCAGGAATTC+CGG | - | chr2_1:73834129-73834148 | None:intergenic | 45.0% | |
ACCAATTCAGGGTTCAAGCT+GGG | - | chr2_1:73834199-73834218 | None:intergenic | 45.0% | |
TACCAATTCAGGGTTCAAGC+TGG | - | chr2_1:73834200-73834219 | None:intergenic | 45.0% | |
GAATTGGCACGTACCAATTC+AGG | - | chr2_1:73834211-73834230 | None:intergenic | 45.0% | |
AGATGAAGGGCTTAGGGTTT+AGG | + | chr2_1:73834298-73834317 | Msa0224100:intron | 45.0% | |
TTGAGGTGAGGTGACTTTCA+TGG | + | chr2_1:73834650-73834669 | Msa0224100:intron | 45.0% | |
TGAGGTGAGGTGACTTTCAT+GGG | + | chr2_1:73834651-73834670 | Msa0224100:intron | 45.0% | |
TGAATTGCGGCTGTCCAATT+AGG | + | chr2_1:73834795-73834814 | Msa0224100:intron | 45.0% | |
AGGAGAGAGTTTGGGCAATT+GGG | - | chr2_1:73835086-73835105 | None:intergenic | 45.0% | |
AAGGAGAGAGTTTGGGCAAT+TGG | - | chr2_1:73835087-73835106 | None:intergenic | 45.0% | |
GGGATCTTCTTGAGATGGTT+GGG | - | chr2_1:73835137-73835156 | None:intergenic | 45.0% | |
AGCGACTGATATTGAACTGG+TGG | - | chr2_1:73835300-73835319 | None:intergenic | 45.0% | |
AGTCCCCAACTCCCATAAAA+AGG | - | chr2_1:73835464-73835483 | None:intergenic | 45.0% | |
! | TTTTATGGGAGTTGGGGACT+TGG | + | chr2_1:73835464-73835483 | Msa0224100:intron | 45.0% |
TTTATGGGAGTTGGGGACTT+GGG | + | chr2_1:73835465-73835484 | Msa0224100:intron | 45.0% | |
CATGTTAGACATGCGTCTGT+TGG | + | chr2_1:73836309-73836328 | Msa0224100:intron | 45.0% | |
CACTTGACTGTAACAACAGG+GGG | - | chr2_1:73836476-73836495 | None:intergenic | 45.0% | |
CCACTTGACTGTAACAACAG+GGG | - | chr2_1:73836477-73836496 | None:intergenic | 45.0% | |
ATAAACACAAACACGGGGAG+GGG | - | chr2_1:73836559-73836578 | None:intergenic | 45.0% | |
AAGGAGAGGGAGATAGAGAA+GGG | + | chr2_1:73836659-73836678 | Msa0224100:intron | 45.0% | |
ACTAATCAGTCATCACCTGC+AGG | + | chr2_1:73836841-73836860 | Msa0224100:intron | 45.0% | |
CATCACCTGCAGGTACAAAA+TGG | + | chr2_1:73836851-73836870 | Msa0224100:intron | 45.0% | |
CAAGATAAAGGACACCTCAG+TGG | + | chr2_1:73836877-73836896 | Msa0224100:CDS | 45.0% | |
AGATAAAGGACACCTCAGTG+GGG | + | chr2_1:73836879-73836898 | Msa0224100:CDS | 45.0% | |
CAAAAGAAATGGACCTGCCA+GGG | + | chr2_1:73836936-73836955 | Msa0224100:CDS | 45.0% | |
AAGTCTGCAGGCTAGAGTTT+CGG | - | chr2_1:73837005-73837024 | None:intergenic | 45.0% | |
!!! | TCTTTTGGTTCTGTGATGGC+AGG | + | chr2_1:73837223-73837242 | Msa0224100:intron | 45.0% |
!!! | AATTTTTTATTGGGGGGGGG+GGG | - | chr2_1:73837365-73837384 | None:intergenic | 45.0% |
ACTCCCAAGGGTAAACCATC+TGG | + | chr2_1:73832884-73832903 | Msa0224100:CDS | 50.0% | |
CTCCCAAGGGTAAACCATCT+GGG | + | chr2_1:73832885-73832904 | Msa0224100:CDS | 50.0% | |
GACCCAGATGGTTTACCCTT+GGG | - | chr2_1:73832890-73832909 | None:intergenic | 50.0% | |
AGACCCAGATGGTTTACCCT+TGG | - | chr2_1:73832891-73832910 | None:intergenic | 50.0% | |
GGAGAAGGAGTAGCATTGCT+TGG | - | chr2_1:73832923-73832942 | None:intergenic | 50.0% | |
GGTGTAGCAGCAACATTGAC+CGG | - | chr2_1:73833007-73833026 | None:intergenic | 50.0% | |
CTCAAGCTCAGACTCCGATT+CGG | + | chr2_1:73833026-73833045 | Msa0224100:CDS | 50.0% | |
TGGCTAGTAGGAGTCCGAAT+CGG | - | chr2_1:73833043-73833062 | None:intergenic | 50.0% | |
! | TTCTGAGAAGGCTGGCTAGT+AGG | - | chr2_1:73833055-73833074 | None:intergenic | 50.0% |
!! | CTCTAAAACCCCGGAATTCC+TGG | + | chr2_1:73834116-73834135 | Msa0224100:intron | 50.0% |
TCCATTTGCCAGGAATTCCG+GGG | - | chr2_1:73834127-73834146 | None:intergenic | 50.0% | |
CTCCATTTGCCAGGAATTCC+GGG | - | chr2_1:73834128-73834147 | None:intergenic | 50.0% | |
GGAATTCCTGGCAAATGGAG+TGG | + | chr2_1:73834128-73834147 | Msa0224100:intron | 50.0% | |
ACCCAGCTTGAACCCTGAAT+TGG | + | chr2_1:73834195-73834214 | Msa0224100:intron | 50.0% | |
GAGGTGAGGTGACTTTCATG+GGG | + | chr2_1:73834652-73834671 | Msa0224100:intron | 50.0% | |
AGGTGAGGTGACTTTCATGG+GGG | + | chr2_1:73834653-73834672 | Msa0224100:intron | 50.0% | |
AGAGAGTTTGGGCAATTGGG+AGG | - | chr2_1:73835083-73835102 | None:intergenic | 50.0% | |
GGGGATCTTCTTGAGATGGT+TGG | - | chr2_1:73835138-73835157 | None:intergenic | 50.0% | |
AGTCGGGGATCTTCTTGAGA+TGG | - | chr2_1:73835142-73835161 | None:intergenic | 50.0% | |
TGAGGTCCCGAGGAAGTTAA+AGG | - | chr2_1:73835170-73835189 | None:intergenic | 50.0% | |
! | CATTATAGGTTGAGGTCCCG+AGG | - | chr2_1:73835180-73835199 | None:intergenic | 50.0% |
!! | TCCTTGCTTTTGTGTTCGGG+TGG | + | chr2_1:73835435-73835454 | Msa0224100:intron | 50.0% |
TCCACCCGAACACAAAAGCA+AGG | - | chr2_1:73835439-73835458 | None:intergenic | 50.0% | |
! | GCAAGTTGTGCTTTTGCTGC+AGG | - | chr2_1:73835609-73835628 | None:intergenic | 50.0% |
CCCCTGTTGTTACAGTCAAG+TGG | + | chr2_1:73836474-73836493 | Msa0224100:intron | 50.0% | |
TAAACACAAACACGGGGAGG+GGG | - | chr2_1:73836558-73836577 | None:intergenic | 50.0% | |
!! | TCTTGAGTCCGTGTTGCTTG+AGG | + | chr2_1:73836636-73836655 | Msa0224100:intron | 50.0% |
CTCTCCTTCCTCAAGCAACA+CGG | - | chr2_1:73836647-73836666 | None:intergenic | 50.0% | |
!! | GTGTTGCTTGAGGAAGGAGA+GGG | + | chr2_1:73836646-73836665 | Msa0224100:intron | 50.0% |
GAAGGAGAGGGAGATAGAGA+AGG | + | chr2_1:73836658-73836677 | Msa0224100:intron | 50.0% | |
GATAAAGGACACCTCAGTGG+GGG | + | chr2_1:73836880-73836899 | Msa0224100:CDS | 50.0% | |
! | CCTGGCAGGTCCATTTCTTT+TGG | - | chr2_1:73836938-73836957 | None:intergenic | 50.0% |
CCAAAAGAAATGGACCTGCC+AGG | + | chr2_1:73836935-73836954 | Msa0224100:CDS | 50.0% | |
!! | TTTTGGCTACTGCAGCAGTC+AGG | + | chr2_1:73837047-73837066 | Msa0224100:CDS | 50.0% |
TTTGGCTACTGCAGCAGTCA+GGG | + | chr2_1:73837048-73837067 | Msa0224100:CDS | 50.0% | |
TCTGTGATGGCAGGTATGCT+CGG | + | chr2_1:73837232-73837251 | Msa0224100:intron | 50.0% | |
!!! | ATTTTTTATTGGGGGGGGGG+GGG | - | chr2_1:73837364-73837383 | None:intergenic | 50.0% |
GGAGTAGCATTGCTTGGAGC+AGG | - | chr2_1:73832917-73832936 | None:intergenic | 55.0% | |
CGAATCGGAGTCTGAGCTTG+AGG | - | chr2_1:73833028-73833047 | None:intergenic | 55.0% | |
!! | GGGGGGTTTCTCTAAAACCC+CGG | + | chr2_1:73834107-73834126 | Msa0224100:intron | 55.0% |
ACCCCGGAATTCCTGGCAAA+TGG | + | chr2_1:73834123-73834142 | Msa0224100:intron | 55.0% | |
GTCACTCCACTCCATTTGCC+AGG | - | chr2_1:73834137-73834156 | None:intergenic | 55.0% | |
!! | GAGTCCGTGTTGCTTGAGGA+AGG | + | chr2_1:73836640-73836659 | Msa0224100:intron | 55.0% |
!! | CGTGTTGCTTGAGGAAGGAG+AGG | + | chr2_1:73836645-73836664 | Msa0224100:intron | 55.0% |
AGCTAACTTCACCCCCACTG+AGG | - | chr2_1:73836894-73836913 | None:intergenic | 55.0% | |
!!! | TTTTTTATTGGGGGGGGGGG+GGG | - | chr2_1:73837363-73837382 | None:intergenic | 55.0% |
GGAGCAGGAGAAGACCCAGA+TGG | - | chr2_1:73832902-73832921 | None:intergenic | 60.0% | |
! | GGAGTACCAGGAGCAGGAGA+CGG | - | chr2_1:73832944-73832963 | None:intergenic | 60.0% |
!! | GCAGAAGCAGCAGGAGTACC+AGG | - | chr2_1:73832956-73832975 | None:intergenic | 60.0% |
! | GGTACTCCTGCTGCTTCTGC+TGG | + | chr2_1:73832956-73832975 | Msa0224100:CDS | 60.0% |
! | GGAGTACCAGCAGAAGCAGC+AGG | - | chr2_1:73832965-73832984 | None:intergenic | 60.0% |
TGCTGCTGCTGCTGTTGCTC+CGG | + | chr2_1:73832985-73833004 | Msa0224100:CDS | 60.0% | |
! | TGGAATCCCAGGTTCGGTCC+AGG | + | chr2_1:73836520-73836539 | Msa0224100:intron | 60.0% |
! | GGAATCCCAGGTTCGGTCCA+GGG | + | chr2_1:73836521-73836540 | Msa0224100:intron | 60.0% |
! | AGGGGGAAGTTTGGTGACCC+TGG | - | chr2_1:73836541-73836560 | None:intergenic | 60.0% |
AACACGGGGAGGGGGAAGTT+TGG | - | chr2_1:73836550-73836569 | None:intergenic | 60.0% | |
!! | AGCCTGCAGACTTGCTGACG+CGG | + | chr2_1:73837012-73837031 | Msa0224100:CDS | 60.0% |
! | TTTTTATTGGGGGGGGGGGG+GGG | - | chr2_1:73837362-73837381 | None:intergenic | 60.0% |
CCAGGAGCAGGAGACGGAGA+AGG | - | chr2_1:73832938-73832957 | None:intergenic | 65.0% | |
CCTTCTCCGTCTCCTGCTCC+TGG | + | chr2_1:73832935-73832954 | Msa0224100:CDS | 65.0% | |
!! | GCAGCAGGAGTACCAGGAGC+AGG | - | chr2_1:73832950-73832969 | None:intergenic | 65.0% |
GGAGCAACAGCAGCAGCAGC+AGG | - | chr2_1:73832986-73833005 | None:intergenic | 65.0% | |
GGTGACCCTGGACCGAACCT+GGG | - | chr2_1:73836529-73836548 | None:intergenic | 65.0% | |
TGGTGACCCTGGACCGAACC+TGG | - | chr2_1:73836530-73836549 | None:intergenic | 65.0% | |
CTCCGCGTCAGCAAGTCTGC+AGG | - | chr2_1:73837017-73837036 | None:intergenic | 65.0% | |
! | TTTTATTGGGGGGGGGGGGG+GGG | - | chr2_1:73837361-73837380 | None:intergenic | 65.0% |
TTTATTGGGGGGGGGGGGGG+GGG | - | chr2_1:73837360-73837379 | None:intergenic | 70.0% | |
TTATTGGGGGGGGGGGGGGG+GGG | - | chr2_1:73837359-73837378 | None:intergenic | 75.0% | |
! | TATTGGGGGGGGGGGGGGGG+GGG | - | chr2_1:73837358-73837377 | None:intergenic | 80.0% |
! | ATTGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:73837357-73837376 | None:intergenic | 85.0% |
! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:73837356-73837375 | None:intergenic | 90.0% |
! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_1:73837355-73837374 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 73832421 | 73837644 | 73832421 | ID=Msa0224100;Name=Msa0224100 |
chr2_1 | mRNA | 73832421 | 73837644 | 73832421 | ID=Msa0224100-mRNA-1;Parent=Msa0224100;Name=Msa0224100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=72|1|1|1|1|1|6|368|301 |
chr2_1 | exon | 73832421 | 73832642 | 73832421 | ID=Msa0224100-mRNA-1:exon:21741;Parent=Msa0224100-mRNA-1 |
chr2_1 | exon | 73832839 | 73833104 | 73832839 | ID=Msa0224100-mRNA-1:exon:21742;Parent=Msa0224100-mRNA-1 |
chr2_1 | exon | 73834570 | 73834654 | 73834570 | ID=Msa0224100-mRNA-1:exon:21743;Parent=Msa0224100-mRNA-1 |
chr2_1 | exon | 73835613 | 73835702 | 73835613 | ID=Msa0224100-mRNA-1:exon:21744;Parent=Msa0224100-mRNA-1 |
chr2_1 | exon | 73836863 | 73837145 | 73836863 | ID=Msa0224100-mRNA-1:exon:21745;Parent=Msa0224100-mRNA-1 |
chr2_1 | exon | 73837245 | 73837644 | 73837245 | ID=Msa0224100-mRNA-1:exon:21746;Parent=Msa0224100-mRNA-1 |
chr2_1 | five_prime_UTR | 73832421 | 73832492 | 73832421 | ID=Msa0224100-mRNA-1:five_prime_utr;Parent=Msa0224100-mRNA-1 |
chr2_1 | CDS | 73832493 | 73832642 | 73832493 | ID=Msa0224100-mRNA-1:cds;Parent=Msa0224100-mRNA-1 |
chr2_1 | CDS | 73832839 | 73833104 | 73832839 | ID=Msa0224100-mRNA-1:cds;Parent=Msa0224100-mRNA-1 |
chr2_1 | CDS | 73834570 | 73834654 | 73834570 | ID=Msa0224100-mRNA-1:cds;Parent=Msa0224100-mRNA-1 |
chr2_1 | CDS | 73835613 | 73835702 | 73835613 | ID=Msa0224100-mRNA-1:cds;Parent=Msa0224100-mRNA-1 |
chr2_1 | CDS | 73836863 | 73837145 | 73836863 | ID=Msa0224100-mRNA-1:cds;Parent=Msa0224100-mRNA-1 |
chr2_1 | CDS | 73837245 | 73837276 | 73837245 | ID=Msa0224100-mRNA-1:cds;Parent=Msa0224100-mRNA-1 |
chr2_1 | three_prime_UTR | 73837277 | 73837644 | 73837277 | ID=Msa0224100-mRNA-1:three_prime_utr;Parent=Msa0224100-mRNA-1 |
Gene Sequence |
Protein sequence |