Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089240 | XP_003597561.2 | 71.429 | 56 | 14 | 1 | 1 | 54 | 1 | 56 | 8.22e-15 | 86.3 |
| Msa1089240 | XP_003597561.2 | 95.050 | 303 | 13 | 1 | 92 | 392 | 1 | 303 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089240 | sp|F4IEY4|TRB5_ARATH | 43.770 | 313 | 132 | 10 | 92 | 389 | 1 | 284 | 5.80e-64 | 209 |
| Msa1089240 | sp|F4IEY4|TRB5_ARATH | 61.404 | 57 | 20 | 1 | 1 | 55 | 1 | 57 | 9.72e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089240 | G7IS32 | 71.429 | 56 | 14 | 1 | 1 | 54 | 1 | 56 | 3.93e-15 | 86.3 |
| Msa1089240 | G7IS32 | 95.050 | 303 | 13 | 1 | 92 | 392 | 1 | 303 | 0.0 | 557 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1089240 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0224100 | Msa1089240 | 0.835892 | 1.288201e-56 | -8.615850e-47 |
| Msa1089240 | Msa1364130 | 0.983347 | 1.697701e-157 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089240 | MtrunA17_Chr2g0329921 | 95.050 | 303 | 13 | 1 | 92 | 392 | 1 | 303 | 0.0 | 557 |
| Msa1089240 | MtrunA17_Chr2g0329921 | 71.429 | 56 | 14 | 1 | 1 | 54 | 1 | 56 | 7.56e-19 | 86.3 |
| Msa1089240 | MtrunA17_Chr8g0342871 | 46.580 | 307 | 135 | 8 | 92 | 391 | 1 | 285 | 1.41e-76 | 238 |
| Msa1089240 | MtrunA17_Chr8g0342871 | 55.385 | 65 | 27 | 1 | 1 | 63 | 1 | 65 | 3.44e-15 | 75.5 |
| Msa1089240 | MtrunA17_Chr5g0401061 | 40.952 | 210 | 99 | 6 | 92 | 299 | 1 | 187 | 1.54e-34 | 129 |
| Msa1089240 | MtrunA17_Chr5g0401061 | 62.745 | 51 | 19 | 0 | 4 | 54 | 6 | 56 | 2.69e-14 | 73.2 |
| Msa1089240 | MtrunA17_Chr4g0054131 | 38.605 | 215 | 112 | 5 | 92 | 299 | 1 | 202 | 1.93e-33 | 127 |
| Msa1089240 | MtrunA17_Chr4g0054131 | 62.745 | 51 | 19 | 0 | 4 | 54 | 6 | 56 | 2.14e-14 | 73.6 |
| Msa1089240 | MtrunA17_Chr8g0384671 | 37.681 | 207 | 110 | 6 | 92 | 298 | 1 | 188 | 2.08e-29 | 115 |
| Msa1089240 | MtrunA17_Chr8g0384671 | 65.385 | 52 | 18 | 0 | 4 | 55 | 6 | 57 | 5.71e-16 | 77.8 |
| Msa1089240 | MtrunA17_Chr2g0293381 | 35.849 | 212 | 109 | 5 | 92 | 298 | 1 | 190 | 8.13e-29 | 114 |
| Msa1089240 | MtrunA17_Chr2g0293381 | 63.462 | 52 | 19 | 0 | 4 | 55 | 6 | 57 | 3.94e-15 | 75.5 |
| Msa1089240 | MtrunA17_Chr1g0166681 | 67.241 | 58 | 19 | 0 | 92 | 149 | 1 | 58 | 6.00e-20 | 87.0 |
| Msa1089240 | MtrunA17_Chr1g0166681 | 67.308 | 52 | 17 | 0 | 4 | 55 | 6 | 57 | 3.90e-16 | 76.3 |
| Msa1089240 | MtrunA17_Chr8g0383821 | 62.069 | 58 | 22 | 0 | 92 | 149 | 1 | 58 | 9.50e-19 | 82.0 |
| Msa1089240 | MtrunA17_Chr8g0383821 | 62.963 | 54 | 20 | 0 | 4 | 57 | 6 | 59 | 8.29e-17 | 76.6 |
| Msa1089240 | MtrunA17_Chr7g0260771 | 42.254 | 71 | 38 | 2 | 226 | 295 | 60 | 128 | 9.65e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089240 | AT1G72740.2 | 44.300 | 307 | 133 | 9 | 92 | 389 | 1 | 278 | 3.39e-67 | 214 |
| Msa1089240 | AT1G72740.2 | 61.404 | 57 | 20 | 1 | 1 | 55 | 1 | 57 | 1.09e-15 | 77.4 |
| Msa1089240 | AT1G72740.1 | 43.770 | 313 | 132 | 10 | 92 | 389 | 1 | 284 | 5.90e-65 | 209 |
| Msa1089240 | AT1G72740.1 | 61.404 | 57 | 20 | 1 | 1 | 55 | 1 | 57 | 9.88e-16 | 77.4 |
| Msa1089240 | AT1G17520.4 | 41.083 | 314 | 142 | 9 | 92 | 389 | 1 | 287 | 2.33e-54 | 182 |
| Msa1089240 | AT1G17520.4 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 9.80e-18 | 83.2 |
| Msa1089240 | AT1G17520.1 | 40.625 | 320 | 141 | 10 | 92 | 389 | 1 | 293 | 1.17e-52 | 177 |
| Msa1089240 | AT1G17520.1 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 9.29e-18 | 83.6 |
| Msa1089240 | AT1G17520.3 | 40.952 | 315 | 142 | 10 | 92 | 389 | 1 | 288 | 1.61e-52 | 177 |
| Msa1089240 | AT1G17520.3 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 1.01e-17 | 83.2 |
| Msa1089240 | AT1G17520.2 | 40.498 | 321 | 141 | 11 | 92 | 389 | 1 | 294 | 7.33e-51 | 172 |
| Msa1089240 | AT1G17520.2 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 9.41e-18 | 83.6 |
| Msa1089240 | AT1G49950.3 | 37.500 | 208 | 109 | 3 | 92 | 299 | 1 | 187 | 1.28e-30 | 119 |
| Msa1089240 | AT1G49950.3 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 7.14e-14 | 72.0 |
| Msa1089240 | AT1G49950.1 | 37.500 | 208 | 109 | 3 | 92 | 299 | 1 | 187 | 1.28e-30 | 119 |
| Msa1089240 | AT1G49950.1 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 7.14e-14 | 72.0 |
| Msa1089240 | AT1G49950.2 | 37.500 | 208 | 109 | 3 | 92 | 299 | 1 | 187 | 1.28e-30 | 119 |
| Msa1089240 | AT1G49950.2 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 7.14e-14 | 72.0 |
| Msa1089240 | AT5G67580.2 | 34.314 | 204 | 117 | 5 | 92 | 295 | 1 | 187 | 2.27e-24 | 102 |
| Msa1089240 | AT5G67580.2 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 3.45e-13 | 70.1 |
| Msa1089240 | AT5G67580.1 | 34.314 | 204 | 117 | 5 | 92 | 295 | 1 | 187 | 2.27e-24 | 102 |
| Msa1089240 | AT5G67580.1 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 3.45e-13 | 70.1 |
| Msa1089240 | AT3G49850.1 | 33.014 | 209 | 111 | 5 | 92 | 295 | 1 | 185 | 2.07e-22 | 96.7 |
| Msa1089240 | AT3G49850.1 | 60.784 | 51 | 20 | 0 | 5 | 55 | 7 | 57 | 1.45e-12 | 68.2 |
| Msa1089240 | AT3G49850.2 | 33.014 | 209 | 111 | 5 | 92 | 295 | 1 | 185 | 2.07e-22 | 96.7 |
| Msa1089240 | AT3G49850.2 | 60.784 | 51 | 20 | 0 | 5 | 55 | 7 | 57 | 1.45e-12 | 68.2 |
| Msa1089240 | AT1G54260.1 | 34.694 | 196 | 85 | 5 | 230 | 389 | 6 | 194 | 2.74e-22 | 94.0 |
| Msa1089240 | AT1G54240.1 | 31.638 | 177 | 95 | 8 | 232 | 389 | 57 | 226 | 2.92e-11 | 63.5 |
Find 86 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGTTCGCTTCACTTAATT+TGG | 0.214811 | 7_3:-2580693 | Msa1089240:exon |
| CCTGGCAGGTCCATTTCTTT+TGG | 0.234603 | 7_3:+2581017 | None:intergenic |
| ACAGAAAGATATTCAAAGTT+TGG | 0.268113 | 7_3:-2580879 | Msa1089240:CDS |
| AGTTTCGGAAGCTTCCTTTA+TGG | 0.269510 | 7_3:+2580965 | None:intergenic |
| ATGGCAGAATTTAACTTCTA+AGG | 0.272609 | 7_3:-2586449 | Msa1089240:CDS |
| CTCAAAGGAACTTGAAATAA+AGG | 0.282782 | 7_3:+2580577 | None:intergenic |
| TGATTGTTTACCAGGATAAA+TGG | 0.284224 | 7_3:-2586468 | Msa1089240:intron |
| AGAAATATGGTGCTGGAAAA+TGG | 0.290469 | 7_3:-2585385 | Msa1089240:CDS |
| CAGAAAGATATTCAAAGTTT+GGG | 0.300205 | 7_3:-2580878 | Msa1089240:CDS |
| ACGAACCTTGAGATCAATAT+TGG | 0.326871 | 7_3:+2585313 | None:intergenic |
| ACAGAAGAAGCGTTAGAAAA+AGG | 0.338386 | 7_3:-2586689 | Msa1089240:CDS |
| CATCAAGGTGTTCAGAAATA+TGG | 0.349929 | 7_3:-2585398 | Msa1089240:CDS |
| TGCATATGATGATGCCATAA+AGG | 0.370905 | 7_3:-2580979 | Msa1089240:CDS |
| ACAAAATGGTTACAAGATAA+AGG | 0.372290 | 7_3:-2581087 | Msa1089240:CDS |
| TCCTTATCATGCTGCTTCTT+CGG | 0.379902 | 7_3:-2586413 | Msa1089240:CDS |
| TGCTGCTGCTGCTGTTGCTC+CGG | 0.384625 | 7_3:-2584966 | Msa1089240:CDS |
| CATCACCTGCAGGTACAAAA+TGG | 0.394363 | 7_3:-2581101 | Msa1089240:intron |
| ACTCCCAAGGGTAAACCATC+TGG | 0.398706 | 7_3:-2585067 | Msa1089240:CDS |
| AAGTCTGCAGGCTAGAGTTT+CGG | 0.422011 | 7_3:+2580950 | None:intergenic |
| AGAAATACGGCGTCGGAAAG+TGG | 0.422049 | 7_3:-2586661 | Msa1089240:CDS |
| ACCACCTACACCAAAAGAAA+TGG | 0.427940 | 7_3:-2581027 | Msa1089240:CDS |
| GCAGAAGCAGCAGGAGTACC+AGG | 0.430652 | 7_3:+2584998 | None:intergenic |
| TGAAGCTCTATCAACAATCA+AGG | 0.441177 | 7_3:-2583365 | Msa1089240:CDS |
| GGTACTCCTGCTGCTTCTGC+TGG | 0.444786 | 7_3:-2584995 | Msa1089240:CDS |
| GCGAGTATTTGACCGAGCTC+AGG | 0.447776 | 7_3:+2586620 | None:intergenic |
| AGCATTTAAGTCAGAACCAT+TGG | 0.454179 | 7_3:+2583339 | None:intergenic |
| GACCCAGATGGTTTACCCTT+GGG | 0.462495 | 7_3:+2585064 | None:intergenic |
| CCTTCTCCGTCTCCTGCTCC+TGG | 0.470392 | 7_3:-2585016 | Msa1089240:CDS |
| AGACCCAGATGGTTTACCCT+TGG | 0.488584 | 7_3:+2585063 | None:intergenic |
| GGAGCAACAGCAGCAGCAGC+AGG | 0.489385 | 7_3:+2584968 | None:intergenic |
| GGAGTAGCATTGCTTGGAGC+AGG | 0.489776 | 7_3:+2585037 | None:intergenic |
| GGAGTACCAGCAGAAGCAGC+AGG | 0.492329 | 7_3:+2584989 | None:intergenic |
| TTCTGAGAAGGCTGGCTAGT+AGG | 0.497538 | 7_3:+2584899 | None:intergenic |
| CTCAAGCTCAGACTCCGATT+CGG | 0.498629 | 7_3:-2584925 | Msa1089240:CDS |
| AATTATTAGATGACCCTGGC+AGG | 0.501469 | 7_3:+2581003 | None:intergenic |
| ACCGAAGAAGCAGCATGATA+AGG | 0.505859 | 7_3:+2586412 | None:intergenic |
| ATTATACTGAGGGTAAATCT+TGG | 0.508478 | 7_3:+2584862 | None:intergenic |
| GCAGCAGGAGTACCAGGAGC+AGG | 0.512995 | 7_3:+2585004 | None:intergenic |
| TGCTATTATTAGCTTCATTG+AGG | 0.513608 | 7_3:-2583320 | Msa1089240:intron |
| GCATTTAAGTCAGAACCATT+GGG | 0.513681 | 7_3:+2583340 | None:intergenic |
| CTCAGAAAGAGAAGAGAGAT+GGG | 0.513728 | 7_3:-2585464 | Msa1089240:CDS |
| CTCCGCGTCAGCAAGTCTGC+AGG | 0.514816 | 7_3:+2580938 | None:intergenic |
| CACTAGGTGCAAAGTTAAGA+AGG | 0.516076 | 7_3:-2582299 | Msa1089240:CDS |
| CCGTTCCAATATTGATCTCA+AGG | 0.518952 | 7_3:-2585318 | Msa1089240:intron |
| GGAGAAGGAGTAGCATTGCT+TGG | 0.518958 | 7_3:+2585031 | None:intergenic |
| GGTGTAGCAGCAACATTGAC+CGG | 0.528722 | 7_3:+2584947 | None:intergenic |
| CTCCCAAGGGTAAACCATCT+GGG | 0.529021 | 7_3:-2585066 | Msa1089240:CDS |
| CCAAAAGAAATGGACCTGCC+AGG | 0.529549 | 7_3:-2581017 | Msa1089240:CDS |
| AACAACCTTGAGATCAGTGT+TGG | 0.530301 | 7_3:+2586589 | None:intergenic |
| GCTCAGAAAGAGAAGAGAGA+TGG | 0.531225 | 7_3:-2585465 | Msa1089240:CDS |
| CAAAATTTCAGAAGGACACT+AGG | 0.531519 | 7_3:-2582315 | Msa1089240:CDS |
| GAAATACGGCGTCGGAAAGT+GGG | 0.534166 | 7_3:-2586660 | Msa1089240:CDS |
| TTTGGCTACTGCAGCAGTCA+GGG | 0.538485 | 7_3:-2580904 | Msa1089240:CDS |
| CAGTCAAGGGAAACTTGAAA+AGG | 0.538946 | 7_3:-2582271 | Msa1089240:intron |
| GAAGAAGAAGCTCTGCATCA+AGG | 0.542831 | 7_3:-2585413 | Msa1089240:CDS |
| CTCAAAGTCAAAATTTCAGA+AGG | 0.543098 | 7_3:-2582323 | Msa1089240:CDS |
| TGGGAAATCAGAAGCAGAAG+TGG | 0.548959 | 7_3:-2585445 | Msa1089240:CDS |
| AAGATAAAGGACACCTCAGT+GGG | 0.554986 | 7_3:-2581074 | Msa1089240:CDS |
| GGAGTACCAGGAGCAGGAGA+CGG | 0.555301 | 7_3:+2585010 | None:intergenic |
| AAGAGATGGGAAATCAAAAG+TGG | 0.558180 | 7_3:-2586721 | None:intergenic |
| TTAAGAAGGCTTGTCAGTCA+AGG | 0.558246 | 7_3:-2582285 | Msa1089240:CDS |
| TGTCATAACTTGACATGTGT+TGG | 0.558378 | 7_3:-2580454 | Msa1089240:three_prime_UTR |
| GGTGTTCAGAAATATGGTGC+TGG | 0.564792 | 7_3:-2585392 | Msa1089240:CDS |
| CCAGGAGCAGGAGACGGAGA+AGG | 0.566651 | 7_3:+2585016 | None:intergenic |
| TAAGAAGGCTTGTCAGTCAA+GGG | 0.572247 | 7_3:-2582284 | Msa1089240:CDS |
| TGTCATCATTCTGAGAAGGC+TGG | 0.574703 | 7_3:+2584891 | None:intergenic |
| CGAATCGGAGTCTGAGCTTG+AGG | 0.575521 | 7_3:+2584926 | None:intergenic |
| CGAGTATTTGACCGAGCTCA+GGG | 0.577095 | 7_3:+2586621 | None:intergenic |
| TCGTTCCAACACTGATCTCA+AGG | 0.583235 | 7_3:-2586594 | Msa1089240:intron |
| CAAAAGAAATGGACCTGCCA+GGG | 0.589349 | 7_3:-2581016 | Msa1089240:CDS |
| TCAAAACCCTAAAACTCCCA+AGG | 0.596857 | 7_3:-2585080 | Msa1089240:CDS |
| TCTGTGATGGCAGGTATGCT+CGG | 0.596964 | 7_3:-2580720 | Msa1089240:intron |
| TGGCTAGTAGGAGTCCGAAT+CGG | 0.600441 | 7_3:+2584911 | None:intergenic |
| AAGATATTCAAAGTTTGGGG+AGG | 0.610909 | 7_3:-2580874 | Msa1089240:CDS |
| GCATTGTCATCATTCTGAGA+AGG | 0.619580 | 7_3:+2584887 | None:intergenic |
| AGCCTGCAGACTTGCTGACG+CGG | 0.625031 | 7_3:-2580940 | Msa1089240:CDS |
| AGAAAGATATTCAAAGTTTG+GGG | 0.625477 | 7_3:-2580877 | Msa1089240:CDS |
| GCAAAATTATTAGATGACCC+TGG | 0.640236 | 7_3:+2580999 | None:intergenic |
| CCTTGAGATCAATATTGGAA+CGG | 0.643002 | 7_3:+2585318 | None:intergenic |
| CAAAACCCTAAAACTCCCAA+GGG | 0.647393 | 7_3:-2585079 | Msa1089240:CDS |
| TCAACAATCAAGGATCCCAA+TGG | 0.653809 | 7_3:-2583355 | Msa1089240:CDS |
| GGTGTCAAGAAATACGGCGT+CGG | 0.659365 | 7_3:-2586668 | Msa1089240:CDS |
| GGAGCAGGAGAAGACCCAGA+TGG | 0.666811 | 7_3:+2585052 | None:intergenic |
| GATAAAGGACACCTCAGTGG+GGG | 0.678712 | 7_3:-2581072 | Msa1089240:CDS |
| CAAGATAAAGGACACCTCAG+TGG | 0.681785 | 7_3:-2581075 | Msa1089240:CDS |
| AGATAAAGGACACCTCAGTG+GGG | 0.739882 | 7_3:-2581073 | Msa1089240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTTTTTTTTTTTGAA+AGG | - | chr7_3:2584105-2584124 | Msa1089240:intron | 10.0% |
| !! | ATCATATAATATCAATATAA+AGG | + | chr7_3:2585202-2585221 | None:intergenic | 10.0% |
| !!! | AAAGGTTTAAATTTTTTATT+GGG | + | chr7_3:2586468-2586487 | None:intergenic | 10.0% |
| !!! | TAAAGGTTTAAATTTTTTAT+TGG | + | chr7_3:2586469-2586488 | None:intergenic | 10.0% |
| !! | TACTTCTCTAATTAATATTA+GGG | - | chr7_3:2580501-2580520 | Msa1089240:three_prime_UTR | 15.0% |
| !! | AATAAAAGATTAATGAGTTA+GGG | - | chr7_3:2580966-2580985 | Msa1089240:CDS | 15.0% |
| !! | ACAGTAAGTAATATAATTTA+GGG | - | chr7_3:2582420-2582439 | Msa1089240:intron | 15.0% |
| !! | AACAAAAATAAGATATATCA+TGG | + | chr7_3:2583598-2583617 | None:intergenic | 15.0% |
| !!! | TTGTACTTTTTATTTTTATC+AGG | - | chr7_3:2583655-2583674 | Msa1089240:intron | 15.0% |
| !!! | TTTTTGTTTTATACTTTTTG+AGG | - | chr7_3:2584675-2584694 | Msa1089240:intron | 15.0% |
| !! | ATAATATCAATATAAAGGAA+AGG | + | chr7_3:2585197-2585216 | None:intergenic | 15.0% |
| !!! | AAGGTTTAAATTTTTTATTG+GGG | + | chr7_3:2586467-2586486 | None:intergenic | 15.0% |
| !!! | TTTTGTGTTACTTTTTTTTT+TGG | - | chr7_3:2586514-2586533 | Msa1089240:intron | 15.0% |
| !!! | TTTGTGTTACTTTTTTTTTT+GGG | - | chr7_3:2586515-2586534 | Msa1089240:intron | 15.0% |
| !!! | TTTTTTTTTGGGAATAAAAT+TGG | - | chr7_3:2586526-2586545 | Msa1089240:intron | 15.0% |
| !! | CTACTTCTCTAATTAATATT+AGG | - | chr7_3:2580500-2580519 | Msa1089240:three_prime_UTR | 20.0% |
| !! | TCTAATTAATATTAGGGTTA+GGG | - | chr7_3:2580507-2580526 | Msa1089240:three_prime_UTR | 20.0% |
| !! | ATCCTAATATGTTAAATTTG+TGG | - | chr7_3:2580888-2580907 | Msa1089240:CDS | 20.0% |
| !! | TAATATGTTAAATTTGTGGT+GGG | - | chr7_3:2580892-2580911 | Msa1089240:CDS | 20.0% |
| !! | GAATAAAAGATTAATGAGTT+AGG | - | chr7_3:2580965-2580984 | Msa1089240:CDS | 20.0% |
| !! | ATTACAAGAACAAACTTATT+TGG | + | chr7_3:2581045-2581064 | None:intergenic | 20.0% |
| !!! | ACTAATTCTTAAGTTGTAAT+AGG | + | chr7_3:2581231-2581250 | None:intergenic | 20.0% |
| !!! | TTAATTATATGTGTTACTGT+CGG | + | chr7_3:2581384-2581403 | None:intergenic | 20.0% |
| !! | AATTTCACAAAAACATAAAC+TGG | + | chr7_3:2581795-2581814 | None:intergenic | 20.0% |
| !! | ACAAAATTACATAAAGAAAG+GGG | + | chr7_3:2582230-2582249 | None:intergenic | 20.0% |
| !! | CACAAAATTACATAAAGAAA+GGG | + | chr7_3:2582231-2582250 | None:intergenic | 20.0% |
| !! | TCACAAAATTACATAAAGAA+AGG | + | chr7_3:2582232-2582251 | None:intergenic | 20.0% |
| !! | GACAGTAAGTAATATAATTT+AGG | - | chr7_3:2582419-2582438 | Msa1089240:intron | 20.0% |
| !! | ATGGTAAGTTATATGATTTA+GGG | - | chr7_3:2582491-2582510 | Msa1089240:intron | 20.0% |
| !! | ACAAAATACTGAATTATGAA+TGG | - | chr7_3:2582806-2582825 | Msa1089240:intron | 20.0% |
| !! | CAAAATACTGAATTATGAAT+GGG | - | chr7_3:2582807-2582826 | Msa1089240:intron | 20.0% |
| !! | AAAATACTGAATTATGAATG+GGG | - | chr7_3:2582808-2582827 | Msa1089240:intron | 20.0% |
| !!! | CACATTCTTATTATACATTT+TGG | + | chr7_3:2582997-2583016 | None:intergenic | 20.0% |
| !!! | TGTGTTTTTTTAAAGATGAA+GGG | - | chr7_3:2583392-2583411 | Msa1089240:intron | 20.0% |
| !! | ATAATATGTTCTTAATTGAC+AGG | + | chr7_3:2583625-2583644 | None:intergenic | 20.0% |
| !! | TCAATTAAGAACATATTATG+AGG | - | chr7_3:2583626-2583645 | Msa1089240:intron | 20.0% |
| !! | CAATTAAGAACATATTATGA+GGG | - | chr7_3:2583627-2583646 | Msa1089240:intron | 20.0% |
| !!! | AAATATGCAATTTTTACATG+TGG | + | chr7_3:2584490-2584509 | None:intergenic | 20.0% |
| !!! | ACACAATCTCAAATTTTATT+TGG | + | chr7_3:2584516-2584535 | None:intergenic | 20.0% |
| !! | AATTTATTTACGAGTAGATA+GGG | + | chr7_3:2586274-2586293 | None:intergenic | 20.0% |
| !! | AAATTTATTTACGAGTAGAT+AGG | + | chr7_3:2586275-2586294 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCAACATTTAAAC+TGG | - | chr7_3:2586406-2586425 | Msa1089240:CDS | 20.0% |
| !!! | AGGTTTAAATTTTTTATTGG+GGG | + | chr7_3:2586466-2586485 | None:intergenic | 20.0% |
| !! | AAAAAGTAACACAAAAACAT+TGG | + | chr7_3:2586510-2586529 | None:intergenic | 20.0% |
| !!! | AAGTGGTTTTTTTTCTATAT+AGG | - | chr7_3:2586564-2586583 | Msa1089240:intron | 20.0% |
| !!! | TTTTTTTCTATATAGGAGAT+TGG | - | chr7_3:2586571-2586590 | Msa1089240:intron | 20.0% |
| ! | CTCTAATTAATATTAGGGTT+AGG | - | chr7_3:2580506-2580525 | Msa1089240:three_prime_UTR | 25.0% |
| ! | TCAATTGTGTCTATCATTAT+TGG | - | chr7_3:2580562-2580581 | Msa1089240:three_prime_UTR | 25.0% |
| ! | GTTATAATTGATTGTTTACC+AGG | - | chr7_3:2580584-2580603 | Msa1089240:three_prime_UTR | 25.0% |
| ! | GGAAAAACACTAATTATTTG+TGG | - | chr7_3:2580759-2580778 | Msa1089240:intron | 25.0% |
| ! | CACCACAAATTTAACATATT+AGG | + | chr7_3:2580893-2580912 | None:intergenic | 25.0% |
| ! | CTAATATGTTAAATTTGTGG+TGG | - | chr7_3:2580891-2580910 | Msa1089240:CDS | 25.0% |
| !! | AATTCTTAAGTTGTAATAGG+TGG | + | chr7_3:2581228-2581247 | None:intergenic | 25.0% |
| ! | ATTAGAACATGTCTAATTTG+AGG | + | chr7_3:2581343-2581362 | None:intergenic | 25.0% |
| ! | AATTAGACATGTTCTAATGT+CGG | - | chr7_3:2581345-2581364 | Msa1089240:intron | 25.0% |
| !!! | TTGACTAGTCTATTATTACT+CGG | - | chr7_3:2581529-2581548 | Msa1089240:intron | 25.0% |
| !!! | TTGTGATTGATTTTTTGTTC+AGG | - | chr7_3:2581926-2581945 | Msa1089240:intron | 25.0% |
| !!! | GATTTTTTGTTCAGGATAAA+TGG | - | chr7_3:2581934-2581953 | Msa1089240:intron | 25.0% |
| ! | GATGGTAAGTTATATGATTT+AGG | - | chr7_3:2582490-2582509 | Msa1089240:intron | 25.0% |
| ! | TATCCAATTTACTCTCAAAT+TGG | + | chr7_3:2582518-2582537 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAATTCAAAACC+AGG | - | chr7_3:2582561-2582580 | Msa1089240:intron | 25.0% |
| ! | TTTGCAAAAATTCAAAACCA+GGG | - | chr7_3:2582562-2582581 | Msa1089240:intron | 25.0% |
| !! | TTTGCCTAATTGCAAATTTT+AGG | - | chr7_3:2582588-2582607 | Msa1089240:intron | 25.0% |
| !! | TTGCCTAATTGCAAATTTTA+GGG | - | chr7_3:2582589-2582608 | Msa1089240:intron | 25.0% |
| ! | TAAATATACAATCCTTTCAG+AGG | + | chr7_3:2582854-2582873 | None:intergenic | 25.0% |
| !!! | AATTTTTCAAATGAGATGGA+GGG | + | chr7_3:2583098-2583117 | None:intergenic | 25.0% |
| !!! | TAATTTTTCAAATGAGATGG+AGG | + | chr7_3:2583099-2583118 | None:intergenic | 25.0% |
| !!! | GAGTAATTTTTCAAATGAGA+TGG | + | chr7_3:2583102-2583121 | None:intergenic | 25.0% |
| ! | TATGGGATATAATTGTATCA+TGG | + | chr7_3:2583172-2583191 | None:intergenic | 25.0% |
| ! | GAGACAAATTAACAATAGAT+GGG | - | chr7_3:2583195-2583214 | Msa1089240:intron | 25.0% |
| ! | AGACAAATTAACAATAGATG+GGG | - | chr7_3:2583196-2583215 | Msa1089240:intron | 25.0% |
| ! | CTATGAATTAAATGGAGAAT+TGG | + | chr7_3:2583334-2583353 | None:intergenic | 25.0% |
| ! | TCCATTTAATTCATAGAAAG+TGG | - | chr7_3:2583338-2583357 | Msa1089240:CDS | 25.0% |
| !!! | CTGTGTTTTTTTAAAGATGA+AGG | - | chr7_3:2583391-2583410 | Msa1089240:intron | 25.0% |
| !!! | AAAGTGTTCTGATTTTAACA+TGG | - | chr7_3:2583447-2583466 | Msa1089240:intron | 25.0% |
| !! | TTTTATCAGGTACAATTCAT+TGG | - | chr7_3:2583668-2583687 | Msa1089240:intron | 25.0% |
| ! | TACTTATGATCACTATTTAG+TGG | - | chr7_3:2583804-2583823 | Msa1089240:intron | 25.0% |
| ! | AAAGATCTTAGATTGAATTG+CGG | - | chr7_3:2583889-2583908 | Msa1089240:intron | 25.0% |
| ! | AATATGTAACGTCAATCATT+TGG | - | chr7_3:2584057-2584076 | Msa1089240:intron | 25.0% |
| ! | ATATGTAACGTCAATCATTT+GGG | - | chr7_3:2584058-2584077 | Msa1089240:intron | 25.0% |
| ! | AGAGGGACTAAAATAAAAAA+TGG | - | chr7_3:2584312-2584331 | Msa1089240:intron | 25.0% |
| ! | GAGGGACTAAAATAAAAAAT+GGG | - | chr7_3:2584313-2584332 | Msa1089240:intron | 25.0% |
| !!! | TTTGCCATTTATTTTTACAC+CGG | - | chr7_3:2584427-2584446 | Msa1089240:intron | 25.0% |
| !!! | TGAATTGATTTTAAACTCTC+CGG | + | chr7_3:2584449-2584468 | None:intergenic | 25.0% |
| ! | AAAATCAATTCATCAACTCA+AGG | - | chr7_3:2584457-2584476 | Msa1089240:intron | 25.0% |
| !! | GCTTTTTGATCTTTTAAATG+CGG | - | chr7_3:2584630-2584649 | Msa1089240:intron | 25.0% |
| !! | CTTTTTGATCTTTTAAATGC+GGG | - | chr7_3:2584631-2584650 | Msa1089240:intron | 25.0% |
| !!! | ATTTCTTTAAAGCATTACAG+AGG | + | chr7_3:2584824-2584843 | None:intergenic | 25.0% |
| !!! | GTTAGTTACTTATTTCTGTT+TGG | - | chr7_3:2584942-2584961 | Msa1089240:CDS | 25.0% |
| !! | TTTTTGAATTTCTGTCACAT+AGG | - | chr7_3:2585080-2585099 | Msa1089240:CDS | 25.0% |
| ! | ACAATAATTTCTTCAGCAAT+GGG | + | chr7_3:2585241-2585260 | None:intergenic | 25.0% |
| ! | GATAAGGATAACGAATAAAA+AGG | + | chr7_3:2585292-2585311 | None:intergenic | 25.0% |
| !!! | TATTTCTCACTGATTTTTTC+CGG | - | chr7_3:2585387-2585406 | Msa1089240:CDS | 25.0% |
| !!! | TTTTACTCTGTTACTTCTAA+TGG | - | chr7_3:2585508-2585527 | Msa1089240:intron | 25.0% |
| ! | TACTCAAATAAACACAAACA+CGG | + | chr7_3:2585674-2585693 | None:intergenic | 25.0% |
| !! | GTGTTTATTTGAGTATGTTT+TGG | - | chr7_3:2585679-2585698 | Msa1089240:intron | 25.0% |
| ! | ACAAAATGGTTACAAGATAA+AGG | - | chr7_3:2585973-2585992 | Msa1089240:intron | 25.0% |
| ! | ACAGAAAGATATTCAAAGTT+TGG | - | chr7_3:2586181-2586200 | Msa1089240:intron | 25.0% |
| ! | CAGAAAGATATTCAAAGTTT+GGG | - | chr7_3:2586182-2586201 | Msa1089240:intron | 25.0% |
| ! | AGAAAGATATTCAAAGTTTG+GGG | - | chr7_3:2586183-2586202 | Msa1089240:intron | 25.0% |
| ! | TTACTTGCATAACTTATAGT+TGG | + | chr7_3:2586299-2586318 | None:intergenic | 25.0% |
| !! | TAAAATGACCATTGTTCTTT+TGG | - | chr7_3:2586316-2586335 | Msa1089240:intron | 25.0% |
| ! | TGTTGAAACAAAAACACTAT+AGG | + | chr7_3:2586399-2586418 | None:intergenic | 25.0% |
| !! | TAAAAACATTTTTCACTGGA+TGG | + | chr7_3:2586433-2586452 | None:intergenic | 25.0% |
| !!! | TTTAAATTTTTTATTGGGGG+GGG | + | chr7_3:2586463-2586482 | None:intergenic | 25.0% |
| !!! | GTTTAAATTTTTTATTGGGG+GGG | + | chr7_3:2586464-2586483 | None:intergenic | 25.0% |
| !!! | GGTTTAAATTTTTTATTGGG+GGG | + | chr7_3:2586465-2586484 | None:intergenic | 25.0% |
| !! | GAAAAAGGTGTCAAGAAATA+CGG | - | chr7_3:2580386-2580405 | Msa1089240:three_prime_UTR | 30.0% |
| TGATTGTTTACCAGGATAAA+TGG | - | chr7_3:2580592-2580611 | Msa1089240:three_prime_UTR | 30.0% | |
| ! | TTAAATTCTGCCATTTATCC+TGG | + | chr7_3:2580605-2580624 | None:intergenic | 30.0% |
| ! | ATGGCAGAATTTAACTTCTA+AGG | - | chr7_3:2580611-2580630 | Msa1089240:three_prime_UTR | 30.0% |
| TCAAGTTCAAATTCTGATGA+AGG | - | chr7_3:2580860-2580879 | Msa1089240:CDS | 30.0% | |
| GGTTATTTGTTCATAAGACT+TGG | + | chr7_3:2581024-2581043 | None:intergenic | 30.0% | |
| ! | TCCTGTTTATCTTTTCTTCA+AGG | - | chr7_3:2581097-2581116 | Msa1089240:intron | 30.0% |
| ACCTTGAAGAAAAGATAAAC+AGG | + | chr7_3:2581101-2581120 | None:intergenic | 30.0% | |
| GATAGTATTTGTGTATTGCA+GGG | + | chr7_3:2581273-2581292 | None:intergenic | 30.0% | |
| AGATAGTATTTGTGTATTGC+AGG | + | chr7_3:2581274-2581293 | None:intergenic | 30.0% | |
| TAAGTGTTTAGTGTTAGTGT+AGG | - | chr7_3:2581461-2581480 | Msa1089240:intron | 30.0% | |
| !! | ACGTTTTGGTATTTATACCT+AGG | + | chr7_3:2581489-2581508 | None:intergenic | 30.0% |
| TAGGTATAAATACCAAAACG+TGG | - | chr7_3:2581488-2581507 | Msa1089240:intron | 30.0% | |
| ATAAATACCAAAACGTGGAA+AGG | - | chr7_3:2581493-2581512 | Msa1089240:intron | 30.0% | |
| TAAATACCAAAACGTGGAAA+GGG | - | chr7_3:2581494-2581513 | Msa1089240:intron | 30.0% | |
| ! | TTTTTGTTCAGGATAAATGG+CGG | - | chr7_3:2581937-2581956 | Msa1089240:intron | 30.0% |
| ATTATACTGAGGGTAAATCT+TGG | + | chr7_3:2582201-2582220 | None:intergenic | 30.0% | |
| TTACATAAAGAAAGGGGAAA+AGG | + | chr7_3:2582224-2582243 | None:intergenic | 30.0% | |
| AGGTGTAAACAAACAAATCA+GGG | + | chr7_3:2582322-2582341 | None:intergenic | 30.0% | |
| AAGGTGTAAACAAACAAATC+AGG | + | chr7_3:2582323-2582342 | None:intergenic | 30.0% | |
| TGCTCTATTCGTAAATTTCA+AGG | + | chr7_3:2582342-2582361 | None:intergenic | 30.0% | |
| ! | TGCCTAATTGCAAATTTTAG+GGG | - | chr7_3:2582590-2582609 | Msa1089240:intron | 30.0% |
| !! | ATTTTAGGGGTGTAAATGTT+CGG | - | chr7_3:2582603-2582622 | Msa1089240:intron | 30.0% |
| TTCAATTTCATTGGGTGAAT+TGG | - | chr7_3:2582630-2582649 | Msa1089240:intron | 30.0% | |
| TGGTGATTTACTCTTTGATT+TGG | - | chr7_3:2582650-2582669 | Msa1089240:intron | 30.0% | |
| !! | TTTACTCTTTGATTTGGTAC+TGG | - | chr7_3:2582656-2582675 | Msa1089240:intron | 30.0% |
| ! | GATAAAAGTACGAGTTTGAT+AGG | - | chr7_3:2582678-2582697 | Msa1089240:intron | 30.0% |
| ATGAGTTCTCATTAGATGTT+GGG | + | chr7_3:2582733-2582752 | None:intergenic | 30.0% | |
| !!! | CTGCATGATTTTTTCACAAT+AGG | + | chr7_3:2582908-2582927 | None:intergenic | 30.0% |
| CTTGATCCAACAATCAAAAT+CGG | + | chr7_3:2582944-2582963 | None:intergenic | 30.0% | |
| TTTGATTGTTGGATCAAGAT+TGG | - | chr7_3:2582946-2582965 | Msa1089240:intron | 30.0% | |
| ACCATCTGATTAAGATCATA+AGG | + | chr7_3:2583022-2583041 | None:intergenic | 30.0% | |
| !! | ATTTTTCAAATGAGATGGAG+GGG | + | chr7_3:2583097-2583116 | None:intergenic | 30.0% |
| TGAAAAATTACTCTTCACCA+AGG | - | chr7_3:2583109-2583128 | Msa1089240:intron | 30.0% | |
| GAAAAATTACTCTTCACCAA+GGG | - | chr7_3:2583110-2583129 | Msa1089240:intron | 30.0% | |
| TCTTCAAAAAGAAAATCCCT+TGG | + | chr7_3:2583129-2583148 | None:intergenic | 30.0% | |
| ATTGTATCATGGCATTTCTT+TGG | + | chr7_3:2583161-2583180 | None:intergenic | 30.0% | |
| !! | TGTTAATTTGTCTCGAGTAT+GGG | + | chr7_3:2583189-2583208 | None:intergenic | 30.0% |
| !! | TTGTTAATTTGTCTCGAGTA+TGG | + | chr7_3:2583190-2583209 | None:intergenic | 30.0% |
| CGAGACAAATTAACAATAGA+TGG | - | chr7_3:2583194-2583213 | Msa1089240:intron | 30.0% | |
| GACAAATTAACAATAGATGG+GGG | - | chr7_3:2583197-2583216 | Msa1089240:intron | 30.0% | |
| !! | GGTAGCAAATTGTTTTATTG+TGG | + | chr7_3:2583285-2583304 | None:intergenic | 30.0% |
| ! | GCCACTTTCTATGAATTAAA+TGG | + | chr7_3:2583342-2583361 | None:intergenic | 30.0% |
| ATTCATAGAAAGTGGCAAAT+AGG | - | chr7_3:2583346-2583365 | Msa1089240:CDS | 30.0% | |
| !! | TTTTTAAAGATGAAGGGCTT+AGG | - | chr7_3:2583398-2583417 | Msa1089240:intron | 30.0% |
| !! | TTTTAAAGATGAAGGGCTTA+GGG | - | chr7_3:2583399-2583418 | Msa1089240:intron | 30.0% |
| ! | TGCTATTATTAGCTTCATTG+AGG | - | chr7_3:2583740-2583759 | Msa1089240:intron | 30.0% |
| !!! | CATCAAAAGTGTTTTCCTTT+TGG | - | chr7_3:2583997-2584016 | Msa1089240:intron | 30.0% |
| !!! | TTTTTTTTGAAAGGCGATTG+TGG | - | chr7_3:2584114-2584133 | Msa1089240:intron | 30.0% |
| ! | ATAAGTGTTGCCAAATAAGA+AGG | + | chr7_3:2584218-2584237 | None:intergenic | 30.0% |
| TCAACCTATAATGTATCAGA+GGG | - | chr7_3:2584295-2584314 | Msa1089240:intron | 30.0% | |
| !! | AATTTCCTTGCTTTTGTGTT+CGG | - | chr7_3:2584539-2584558 | Msa1089240:intron | 30.0% |
| !!! | CTTCTGAAATTTTGACTTTG+AGG | + | chr7_3:2584739-2584758 | None:intergenic | 30.0% |
| CTCAAAGTCAAAATTTCAGA+AGG | - | chr7_3:2584737-2584756 | Msa1089240:intron | 30.0% | |
| ! | ACACACTATAAAGGAGTATA+AGG | + | chr7_3:2584882-2584901 | None:intergenic | 30.0% |
| AAAGAAAGTGACAGAAAATG+AGG | + | chr7_3:2585125-2585144 | None:intergenic | 30.0% | |
| AATATAAAGGAAAGGCTTCA+AGG | + | chr7_3:2585189-2585208 | None:intergenic | 30.0% | |
| CAATAATTTCTTCAGCAATG+GGG | + | chr7_3:2585240-2585259 | None:intergenic | 30.0% | |
| GACAATAATTTCTTCAGCAA+TGG | + | chr7_3:2585242-2585261 | None:intergenic | 30.0% | |
| AAGGATCCAGAAAGAAATTA+TGG | + | chr7_3:2585273-2585292 | None:intergenic | 30.0% | |
| TAACAAGTATGAAGTCAACA+AGG | + | chr7_3:2585321-2585340 | None:intergenic | 30.0% | |
| ! | ACTTCATACTTGTTAGATGT+GGG | - | chr7_3:2585326-2585345 | Msa1089240:CDS | 30.0% |
| !! | CAAGCAAAATGAAGCATTTT+TGG | + | chr7_3:2585460-2585479 | None:intergenic | 30.0% |
| ACATAGAACATACAACATTG+AGG | + | chr7_3:2585483-2585502 | None:intergenic | 30.0% | |
| ! | AACTGTGAGGACATTTTATT+TGG | - | chr7_3:2585608-2585627 | Msa1089240:intron | 30.0% |
| ACTCAAATAAACACAAACAC+GGG | + | chr7_3:2585673-2585692 | None:intergenic | 30.0% | |
| ! | ACTCTTTCTTTTTCTGCTAT+TGG | + | chr7_3:2585713-2585732 | None:intergenic | 30.0% |
| AAGATTGAACGTGTGTAAAA+TGG | - | chr7_3:2585818-2585837 | Msa1089240:intron | 30.0% | |
| ! | CGTCTAAAAACATTTTTCAC+TGG | + | chr7_3:2586437-2586456 | None:intergenic | 30.0% |
| !!! | TTAAATTTTTTATTGGGGGG+GGG | + | chr7_3:2586462-2586481 | None:intergenic | 30.0% |
| CTCAAAGGAACTTGAAATAA+AGG | + | chr7_3:2586486-2586505 | None:intergenic | 30.0% | |
| !! | ACAGAAGAAGCGTTAGAAAA+AGG | - | chr7_3:2580371-2580390 | Msa1089240:three_prime_UTR | 35.0% |
| ! | TACAAGGTGTTACACGATAA+TGG | - | chr7_3:2580724-2580743 | Msa1089240:intron | 35.0% |
| ! | CATCAAGGTGTTCAGAAATA+TGG | - | chr7_3:2581662-2581681 | Msa1089240:intron | 35.0% |
| ! | AGAAATATGGTGCTGGAAAA+TGG | - | chr7_3:2581675-2581694 | Msa1089240:intron | 35.0% |
| !! | CGAGTTTTTGACTGAATTGA+GGG | + | chr7_3:2581718-2581737 | None:intergenic | 35.0% |
| CCTTGAGATCAATATTGGAA+CGG | + | chr7_3:2581745-2581764 | None:intergenic | 35.0% | |
| ACGAACCTTGAGATCAATAT+TGG | + | chr7_3:2581750-2581769 | None:intergenic | 35.0% | |
| ! | TCGTTTTGTCTTCCTTAATC+AGG | - | chr7_3:2581766-2581785 | Msa1089240:intron | 35.0% |
| ! | CGTTTTGTCTTCCTTAATCA+GGG | - | chr7_3:2581767-2581786 | Msa1089240:intron | 35.0% |
| ATAAACCCTAACCCTGATTA+AGG | + | chr7_3:2581781-2581800 | None:intergenic | 35.0% | |
| ! | CGGAATTTGAATGTTTTTCC+TGG | - | chr7_3:2581957-2581976 | Msa1089240:intron | 35.0% |
| TTGTGTGTGGTTGTTTGATT+TGG | - | chr7_3:2582277-2582296 | Msa1089240:CDS | 35.0% | |
| GTGTAAACAAACAAATCAGG+GGG | + | chr7_3:2582320-2582339 | None:intergenic | 35.0% | |
| GGTGTAAACAAACAAATCAG+GGG | + | chr7_3:2582321-2582340 | None:intergenic | 35.0% | |
| !! | GATCTTTCTGTTGACTTGTA+AGG | - | chr7_3:2582388-2582407 | Msa1089240:intron | 35.0% |
| GACTTCAGAGACTAATTTGA+TGG | - | chr7_3:2582472-2582491 | Msa1089240:intron | 35.0% | |
| GGACCAATTTGAGAGTAAAT+TGG | - | chr7_3:2582512-2582531 | Msa1089240:intron | 35.0% | |
| CACCCCTAAAATTTGCAATT+AGG | + | chr7_3:2582595-2582614 | None:intergenic | 35.0% | |
| TTCACCCAATGAAATTGAAG+AGG | + | chr7_3:2582629-2582648 | None:intergenic | 35.0% | |
| TGAGTTCTCATTAGATGTTG+GGG | + | chr7_3:2582732-2582751 | None:intergenic | 35.0% | |
| GATGAGTTCTCATTAGATGT+TGG | + | chr7_3:2582734-2582753 | None:intergenic | 35.0% | |
| GCTTGTGTGGCAATAATAAT+AGG | + | chr7_3:2582756-2582775 | None:intergenic | 35.0% | |
| GATTACAAAATCAGCTTGTG+TGG | + | chr7_3:2582769-2582788 | None:intergenic | 35.0% | |
| TACTGAATTATGAATGGGGT+TGG | - | chr7_3:2582812-2582831 | Msa1089240:intron | 35.0% | |
| AATCCTTTCAGAGGAAAAAG+GGG | + | chr7_3:2582845-2582864 | None:intergenic | 35.0% | |
| CAATCCTTTCAGAGGAAAAA+GGG | + | chr7_3:2582846-2582865 | None:intergenic | 35.0% | |
| ACAATCCTTTCAGAGGAAAA+AGG | + | chr7_3:2582847-2582866 | None:intergenic | 35.0% | |
| !!! | TGTCATCCGATTTTGATTGT+TGG | - | chr7_3:2582935-2582954 | Msa1089240:intron | 35.0% |
| GGACTCAAAGTTAACAAAGT+GGG | + | chr7_3:2582976-2582995 | None:intergenic | 35.0% | |
| TGGACTCAAAGTTAACAAAG+TGG | + | chr7_3:2582977-2582996 | None:intergenic | 35.0% | |
| GCCTTATGATCTTAATCAGA+TGG | - | chr7_3:2583018-2583037 | Msa1089240:intron | 35.0% | |
| !! | TTTTTCAAATGAGATGGAGG+GGG | + | chr7_3:2583096-2583115 | None:intergenic | 35.0% |
| ATAGAAAGTGGCAAATAGGT+GGG | - | chr7_3:2583350-2583369 | Msa1089240:CDS | 35.0% | |
| TGAAGCTCTATCAACAATCA+AGG | - | chr7_3:2583695-2583714 | Msa1089240:intron | 35.0% | |
| GCATTTAAGTCAGAACCATT+GGG | + | chr7_3:2583723-2583742 | None:intergenic | 35.0% | |
| AGCATTTAAGTCAGAACCAT+TGG | + | chr7_3:2583724-2583743 | None:intergenic | 35.0% | |
| ! | TTATTAGCTTCATTGAGGTG+AGG | - | chr7_3:2583745-2583764 | Msa1089240:intron | 35.0% |
| TGGGAGTCATAAAACCTAAT+TGG | + | chr7_3:2583919-2583938 | None:intergenic | 35.0% | |
| !!! | CAAAAGTGTTTTCCTTTTGG+TGG | - | chr7_3:2584000-2584019 | Msa1089240:intron | 35.0% |
| CAAAATACCTTTCCACCAAA+AGG | + | chr7_3:2584015-2584034 | None:intergenic | 35.0% | |
| GTACAGTATGCATTTGATTG+TGG | - | chr7_3:2584080-2584099 | Msa1089240:intron | 35.0% | |
| GGCAACAAATTGATACGAAT+TGG | - | chr7_3:2584135-2584154 | Msa1089240:intron | 35.0% | |
| AAGTTAAAGGTAGTTAGTCG+GGG | + | chr7_3:2584265-2584284 | None:intergenic | 35.0% | |
| GAAGTTAAAGGTAGTTAGTC+GGG | + | chr7_3:2584266-2584285 | None:intergenic | 35.0% | |
| GGAAGTTAAAGGTAGTTAGT+CGG | + | chr7_3:2584267-2584286 | None:intergenic | 35.0% | |
| ! | CTAACTACCTTTAACTTCCT+CGG | - | chr7_3:2584268-2584287 | Msa1089240:intron | 35.0% |
| ! | TAACTACCTTTAACTTCCTC+GGG | - | chr7_3:2584269-2584288 | Msa1089240:intron | 35.0% |
| CTCTGATACATTATAGGTTG+AGG | + | chr7_3:2584296-2584315 | None:intergenic | 35.0% | |
| CTCAACCTATAATGTATCAG+AGG | - | chr7_3:2584294-2584313 | Msa1089240:intron | 35.0% | |
| TAGTCCCTCTGATACATTAT+AGG | + | chr7_3:2584302-2584321 | None:intergenic | 35.0% | |
| CTCTCCGGTGTAAAAATAAA+TGG | + | chr7_3:2584434-2584453 | None:intergenic | 35.0% | |
| !! | ATTTCCTTGCTTTTGTGTTC+GGG | - | chr7_3:2584540-2584559 | Msa1089240:intron | 35.0% |
| ! | GATTCCTTTTTATGGGAGTT+GGG | - | chr7_3:2584565-2584584 | Msa1089240:intron | 35.0% |
| ! | ATTCCTTTTTATGGGAGTTG+GGG | - | chr7_3:2584566-2584585 | Msa1089240:intron | 35.0% |
| ! | AGATCAAAAAGCACGATAGA+TGG | + | chr7_3:2584622-2584641 | None:intergenic | 35.0% |
| CAAAATTTCAGAAGGACACT+AGG | - | chr7_3:2584745-2584764 | Msa1089240:intron | 35.0% | |
| ACACTAAGCACACACTATAA+AGG | + | chr7_3:2584891-2584910 | None:intergenic | 35.0% | |
| GAGTTAAGTCAGTTTACTCT+TGG | - | chr7_3:2584992-2585011 | Msa1089240:CDS | 35.0% | |
| CAATGGGGATCACTAATATA+GGG | + | chr7_3:2585225-2585244 | None:intergenic | 35.0% | |
| GAAAGAAATTATGGAGTAGC+AGG | + | chr7_3:2585264-2585283 | None:intergenic | 35.0% | |
| GCTACTCCATAATTTCTTTC+TGG | - | chr7_3:2585264-2585283 | Msa1089240:intron | 35.0% | |
| GTCAACAAGGTAACATGATA+AGG | + | chr7_3:2585308-2585327 | None:intergenic | 35.0% | |
| ! | GACTTCATACTTGTTAGATG+TGG | - | chr7_3:2585325-2585344 | Msa1089240:CDS | 35.0% |
| ATGTCTAACATGAAAATCGC+CGG | + | chr7_3:2585409-2585428 | None:intergenic | 35.0% | |
| ! | CTCTGTTACTTCTAATGGTT+TGG | - | chr7_3:2585513-2585532 | Msa1089240:intron | 35.0% |
| ! | TGTTACTTCTAATGGTTTGG+AGG | - | chr7_3:2585516-2585535 | Msa1089240:intron | 35.0% |
| ! | GTTACTTCTAATGGTTTGGA+GGG | - | chr7_3:2585517-2585536 | Msa1089240:intron | 35.0% |
| !! | GCTCTAGGATTAATTGTAAC+AGG | - | chr7_3:2585549-2585568 | Msa1089240:intron | 35.0% |
| !! | GACATTTTATTTGGAATCCC+AGG | - | chr7_3:2585617-2585636 | Msa1089240:intron | 35.0% |
| ! | TTTATTTGGAATCCCAGGTT+CGG | - | chr7_3:2585622-2585641 | Msa1089240:intron | 35.0% |
| CTCAAATAAACACAAACACG+GGG | + | chr7_3:2585672-2585691 | None:intergenic | 35.0% | |
| GCAAAATTATTAGATGACCC+TGG | + | chr7_3:2586064-2586083 | None:intergenic | 35.0% | |
| ! | TGCATATGATGATGCCATAA+AGG | - | chr7_3:2586081-2586100 | Msa1089240:intron | 35.0% |
| AAGATATTCAAAGTTTGGGG+AGG | - | chr7_3:2586186-2586205 | Msa1089240:intron | 35.0% | |
| TCACAGAACCAAAAGAACAA+TGG | + | chr7_3:2586327-2586346 | None:intergenic | 35.0% | |
| !!! | TTGTTCTTTTGGTTCTGTGA+TGG | - | chr7_3:2586327-2586346 | Msa1089240:intron | 35.0% |
| ACTGTTCGCTTCACTTAATT+TGG | - | chr7_3:2586367-2586386 | Msa1089240:intron | 35.0% | |
| ! | CACAAAAACATTGGTCTCAA+AGG | + | chr7_3:2586501-2586520 | None:intergenic | 35.0% |
| !!! | GGTCTTTAGTTTTGTGAAAG+TGG | - | chr7_3:2586547-2586566 | Msa1089240:intron | 35.0% |
| TGTCATAACTTGACATGTGT+TGG | - | chr7_3:2586606-2586625 | Msa1089240:CDS | 35.0% | |
| !! | ATTTTGAAAGACCCTGAGCT+CGG | - | chr7_3:2580428-2580447 | Msa1089240:three_prime_UTR | 40.0% |
| AACAACCTTGAGATCAGTGT+TGG | + | chr7_3:2580474-2580493 | None:intergenic | 40.0% | |
| ! | TCCTTATCATGCTGCTTCTT+CGG | - | chr7_3:2580647-2580666 | Msa1089240:three_prime_UTR | 40.0% |
| AACACCTTGTAGAGTAGCAT+TGG | + | chr7_3:2580715-2580734 | None:intergenic | 40.0% | |
| !! | CGATAATGGAGCATAATTGC+AGG | - | chr7_3:2580738-2580757 | Msa1089240:intron | 40.0% |
| ATGTATCGAGTTCAAGGTCT+TGG | - | chr7_3:2580928-2580947 | Msa1089240:CDS | 40.0% | |
| TAGTGTTAGTGTAGGTTCCT+AGG | - | chr7_3:2581469-2581488 | Msa1089240:intron | 40.0% | |
| CTCAGAAAGAGAAGAGAGAT+GGG | - | chr7_3:2581596-2581615 | Msa1089240:intron | 40.0% | |
| !! | GCGAGTTTTTGACTGAATTG+AGG | + | chr7_3:2581719-2581738 | None:intergenic | 40.0% |
| CCGTTCCAATATTGATCTCA+AGG | - | chr7_3:2581742-2581761 | Msa1089240:intron | 40.0% | |
| TGTCTTCCTTAATCAGGGTT+AGG | - | chr7_3:2581772-2581791 | Msa1089240:intron | 40.0% | |
| GTCTTCCTTAATCAGGGTTA+GGG | - | chr7_3:2581773-2581792 | Msa1089240:intron | 40.0% | |
| TCAAAACCCTAAAACTCCCA+AGG | - | chr7_3:2581980-2581999 | Msa1089240:intron | 40.0% | |
| CAAAACCCTAAAACTCCCAA+GGG | - | chr7_3:2581981-2582000 | Msa1089240:intron | 40.0% | |
| ! | GTTTACCCTTGGGAGTTTTA+GGG | + | chr7_3:2581989-2582008 | None:intergenic | 40.0% |
| ! | GCATTGTCATCATTCTGAGA+AGG | + | chr7_3:2582176-2582195 | None:intergenic | 40.0% |
| GGGGAAAAGGATTATACTGA+GGG | + | chr7_3:2582211-2582230 | None:intergenic | 40.0% | |
| AGGGGAAAAGGATTATACTG+AGG | + | chr7_3:2582212-2582231 | None:intergenic | 40.0% | |
| ATTTGTGCGCAAATTGTGTG+TGG | - | chr7_3:2582264-2582283 | Msa1089240:intron | 40.0% | |
| !! | TGTGGTTGTTTGATTTGGAG+TGG | - | chr7_3:2582282-2582301 | Msa1089240:CDS | 40.0% |
| AAACAAATCAGGGGGCAAAT+TGG | + | chr7_3:2582312-2582331 | None:intergenic | 40.0% | |
| TTCGGCCTCTTCAATTTCAT+TGG | - | chr7_3:2582621-2582640 | Msa1089240:intron | 40.0% | |
| TCGGCCTCTTCAATTTCATT+GGG | - | chr7_3:2582622-2582641 | Msa1089240:intron | 40.0% | |
| AATTGGCACGTACCAATTCA+GGG | + | chr7_3:2583317-2583336 | None:intergenic | 40.0% | |
| CATAGAAAGTGGCAAATAGG+TGG | - | chr7_3:2583349-2583368 | Msa1089240:CDS | 40.0% | |
| TCAACAATCAAGGATCCCAA+TGG | - | chr7_3:2583705-2583724 | Msa1089240:intron | 40.0% | |
| TCACAGCAAGTCAAGCATTT+GGG | + | chr7_3:2583938-2583957 | None:intergenic | 40.0% | |
| ATCACAGCAAGTCAAGCATT+TGG | + | chr7_3:2583939-2583958 | None:intergenic | 40.0% | |
| ! | GTGTTTTCCTTTTGGTGGAA+AGG | - | chr7_3:2584005-2584024 | Msa1089240:intron | 40.0% |
| ATTGGAATTGCAGTACTGTG+AGG | - | chr7_3:2584153-2584172 | Msa1089240:intron | 40.0% | |
| AAGAAGGAAGGAGAGAGTTT+GGG | + | chr7_3:2584202-2584221 | None:intergenic | 40.0% | |
| TAAGAAGGAAGGAGAGAGTT+TGG | + | chr7_3:2584203-2584222 | None:intergenic | 40.0% | |
| CTCTCTCCTTCCTTCTTATT+TGG | - | chr7_3:2584205-2584224 | Msa1089240:intron | 40.0% | |
| GTGTTGCCAAATAAGAAGGA+AGG | + | chr7_3:2584214-2584233 | None:intergenic | 40.0% | |
| CAAAGCGACTGATATTGAAC+TGG | + | chr7_3:2584411-2584430 | None:intergenic | 40.0% | |
| !! | TTCGGGTGGATTCCTTTTTA+TGG | - | chr7_3:2584557-2584576 | Msa1089240:intron | 40.0% |
| !! | TCGGGTGGATTCCTTTTTAT+GGG | - | chr7_3:2584558-2584577 | Msa1089240:intron | 40.0% |
| ! | GGATTCCTTTTTATGGGAGT+TGG | - | chr7_3:2584564-2584583 | Msa1089240:intron | 40.0% |
| TGCGAAGTAAGCTACATTTC+TGG | + | chr7_3:2584599-2584618 | None:intergenic | 40.0% | |
| CACTAGGTGCAAAGTTAAGA+AGG | - | chr7_3:2584761-2584780 | Msa1089240:intron | 40.0% | |
| TTAAGAAGGCTTGTCAGTCA+AGG | - | chr7_3:2584775-2584794 | Msa1089240:intron | 40.0% | |
| TAAGAAGGCTTGTCAGTCAA+GGG | - | chr7_3:2584776-2584795 | Msa1089240:intron | 40.0% | |
| CAGTCAAGGGAAACTTGAAA+AGG | - | chr7_3:2584789-2584808 | Msa1089240:intron | 40.0% | |
| GATCCACTGTATTCCAAAGT+CGG | - | chr7_3:2585034-2585053 | Msa1089240:CDS | 40.0% | |
| !! | TAACCGACTTTGGAATACAG+TGG | + | chr7_3:2585040-2585059 | None:intergenic | 40.0% |
| !! | ACGCATTGATTAACCGACTT+TGG | + | chr7_3:2585050-2585069 | None:intergenic | 40.0% |
| GCAATGGGGATCACTAATAT+AGG | + | chr7_3:2585226-2585245 | None:intergenic | 40.0% | |
| GGAGGGAAAAAAATTGCTCT+AGG | - | chr7_3:2585534-2585553 | Msa1089240:intron | 40.0% | |
| ACCACTTGACTGTAACAACA+GGG | + | chr7_3:2585586-2585605 | None:intergenic | 40.0% | |
| AACCACTTGACTGTAACAAC+AGG | + | chr7_3:2585587-2585606 | None:intergenic | 40.0% | |
| AGTCAAGTGGTTTAACTGTG+AGG | - | chr7_3:2585595-2585614 | Msa1089240:intron | 40.0% | |
| AATAAACACAAACACGGGGA+GGG | + | chr7_3:2585668-2585687 | None:intergenic | 40.0% | |
| AAATAAACACAAACACGGGG+AGG | + | chr7_3:2585669-2585688 | None:intergenic | 40.0% | |
| !!! | TTGAGTATGTTTTGGCCACT+AGG | - | chr7_3:2585687-2585706 | Msa1089240:intron | 40.0% |
| !! | TTTTTCTGCTATTGGCCTAG+TGG | + | chr7_3:2585705-2585724 | None:intergenic | 40.0% |
| ! | CACGTTCAATCTTTCTAGCA+TGG | + | chr7_3:2585811-2585830 | None:intergenic | 40.0% |
| ! | TGTAACCATTTTGTACCTGC+AGG | + | chr7_3:2585967-2585986 | None:intergenic | 40.0% |
| AAGATAAAGGACACCTCAGT+GGG | - | chr7_3:2585986-2586005 | Msa1089240:intron | 40.0% | |
| ACCACCTACACCAAAAGAAA+TGG | - | chr7_3:2586033-2586052 | Msa1089240:intron | 40.0% | |
| !! | TCCATTTCTTTTGGTGTAGG+TGG | + | chr7_3:2586037-2586056 | None:intergenic | 40.0% |
| !! | AGGTCCATTTCTTTTGGTGT+AGG | + | chr7_3:2586040-2586059 | None:intergenic | 40.0% |
| AATTATTAGATGACCCTGGC+AGG | + | chr7_3:2586060-2586079 | None:intergenic | 40.0% | |
| AGTTTCGGAAGCTTCCTTTA+TGG | + | chr7_3:2586098-2586117 | None:intergenic | 40.0% | |
| !! | CGCGGAGAATAAGTCATTTT+TGG | - | chr7_3:2586138-2586157 | Msa1089240:intron | 40.0% |
| TCGTTCCAACACTGATCTCA+AGG | - | chr7_3:2580466-2580485 | Msa1089240:three_prime_UTR | 45.0% | |
| ACCGAAGAAGCAGCATGATA+AGG | + | chr7_3:2580651-2580670 | None:intergenic | 45.0% | |
| CTAGCCAATGCTACTCTACA+AGG | - | chr7_3:2580708-2580727 | Msa1089240:CDS | 45.0% | |
| AACTCGATACATCACAGGCA+AGG | + | chr7_3:2580920-2580939 | None:intergenic | 45.0% | |
| CCTTGAACTCGATACATCAC+AGG | + | chr7_3:2580925-2580944 | None:intergenic | 45.0% | |
| CCTGTGATGTATCGAGTTCA+AGG | - | chr7_3:2580922-2580941 | Msa1089240:CDS | 45.0% | |
| GGTCTTGGAATCGATGCTTA+TGG | - | chr7_3:2580943-2580962 | Msa1089240:CDS | 45.0% | |
| ! | CTCTTACCCTTTCCACGTTT+TGG | + | chr7_3:2581503-2581522 | None:intergenic | 45.0% |
| GCTCAGAAAGAGAAGAGAGA+TGG | - | chr7_3:2581595-2581614 | Msa1089240:intron | 45.0% | |
| TGGGAAATCAGAAGCAGAAG+TGG | - | chr7_3:2581615-2581634 | Msa1089240:intron | 45.0% | |
| GAAGAAGAAGCTCTGCATCA+AGG | - | chr7_3:2581647-2581666 | Msa1089240:intron | 45.0% | |
| GGTGTTCAGAAATATGGTGC+TGG | - | chr7_3:2581668-2581687 | Msa1089240:intron | 45.0% | |
| !!! | GGAGTTTTAGGGTTTTGACC+AGG | + | chr7_3:2581978-2581997 | None:intergenic | 45.0% |
| ! | GGTTTACCCTTGGGAGTTTT+AGG | + | chr7_3:2581990-2582009 | None:intergenic | 45.0% |
| ! | TGTCATCATTCTGAGAAGGC+TGG | + | chr7_3:2582172-2582191 | None:intergenic | 45.0% |
| TGCAATTAGGCAAAAGACCC+TGG | + | chr7_3:2582582-2582601 | None:intergenic | 45.0% | |
| ! | TGTCCCCTTTTTCCTCTGAA+AGG | - | chr7_3:2582839-2582858 | Msa1089240:intron | 45.0% |
| ! | AGGAAGCACGAATCACATGT+TGG | + | chr7_3:2582888-2582907 | None:intergenic | 45.0% |
| TGCACGATTGCATGAGTACA+TGG | - | chr7_3:2583055-2583074 | Msa1089240:intron | 45.0% | |
| ! | GATGGAGGGGGTTTTCAATT+TGG | + | chr7_3:2583084-2583103 | None:intergenic | 45.0% |
| ACTCCATTTGCCAGGAATTC+CGG | + | chr7_3:2583236-2583255 | None:intergenic | 45.0% | |
| ACCAATTCAGGGTTCAAGCT+GGG | + | chr7_3:2583306-2583325 | None:intergenic | 45.0% | |
| TACCAATTCAGGGTTCAAGC+TGG | + | chr7_3:2583307-2583326 | None:intergenic | 45.0% | |
| GAATTGGCACGTACCAATTC+AGG | + | chr7_3:2583318-2583337 | None:intergenic | 45.0% | |
| AGATGAAGGGCTTAGGGTTT+AGG | - | chr7_3:2583405-2583424 | Msa1089240:intron | 45.0% | |
| TTGAGGTGAGGTGACTTTCA+TGG | - | chr7_3:2583757-2583776 | Msa1089240:intron | 45.0% | |
| TGAGGTGAGGTGACTTTCAT+GGG | - | chr7_3:2583758-2583777 | Msa1089240:intron | 45.0% | |
| TGAATTGCGGCTGTCCAATT+AGG | - | chr7_3:2583902-2583921 | Msa1089240:intron | 45.0% | |
| AGGAGAGAGTTTGGGCAATT+GGG | + | chr7_3:2584194-2584213 | None:intergenic | 45.0% | |
| AAGGAGAGAGTTTGGGCAAT+TGG | + | chr7_3:2584195-2584214 | None:intergenic | 45.0% | |
| GGGATCTTCTTGAGATGGTT+GGG | + | chr7_3:2584245-2584264 | None:intergenic | 45.0% | |
| AGCGACTGATATTGAACTGG+TGG | + | chr7_3:2584408-2584427 | None:intergenic | 45.0% | |
| AGTCCCCAACTCCCATAAAA+AGG | + | chr7_3:2584572-2584591 | None:intergenic | 45.0% | |
| ! | TTTTATGGGAGTTGGGGACT+TGG | - | chr7_3:2584572-2584591 | Msa1089240:intron | 45.0% |
| TTTATGGGAGTTGGGGACTT+GGG | - | chr7_3:2584573-2584592 | Msa1089240:intron | 45.0% | |
| CATGTTAGACATGCGTCTGT+TGG | - | chr7_3:2585417-2585436 | Msa1089240:CDS | 45.0% | |
| CACTTGACTGTAACAACAGG+GGG | + | chr7_3:2585584-2585603 | None:intergenic | 45.0% | |
| CCACTTGACTGTAACAACAG+GGG | + | chr7_3:2585585-2585604 | None:intergenic | 45.0% | |
| ATAAACACAAACACGGGGAG+GGG | + | chr7_3:2585667-2585686 | None:intergenic | 45.0% | |
| ACTAATCAGTCATCACCTGC+AGG | - | chr7_3:2585949-2585968 | Msa1089240:intron | 45.0% | |
| CATCACCTGCAGGTACAAAA+TGG | - | chr7_3:2585959-2585978 | Msa1089240:intron | 45.0% | |
| CAAGATAAAGGACACCTCAG+TGG | - | chr7_3:2585985-2586004 | Msa1089240:intron | 45.0% | |
| AGATAAAGGACACCTCAGTG+GGG | - | chr7_3:2585987-2586006 | Msa1089240:intron | 45.0% | |
| CAAAAGAAATGGACCTGCCA+GGG | - | chr7_3:2586044-2586063 | Msa1089240:intron | 45.0% | |
| AAGTCTGCAGGCTAGAGTTT+CGG | + | chr7_3:2586113-2586132 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGTTCTGTGATGGC+AGG | - | chr7_3:2586331-2586350 | Msa1089240:intron | 45.0% |
| GGTGTCAAGAAATACGGCGT+CGG | - | chr7_3:2580392-2580411 | Msa1089240:three_prime_UTR | 50.0% | |
| ! | AGAAATACGGCGTCGGAAAG+TGG | - | chr7_3:2580399-2580418 | Msa1089240:three_prime_UTR | 50.0% |
| ! | GAAATACGGCGTCGGAAAGT+GGG | - | chr7_3:2580400-2580419 | Msa1089240:three_prime_UTR | 50.0% |
| CGAGTATTTGACCGAGCTCA+GGG | + | chr7_3:2580442-2580461 | None:intergenic | 50.0% | |
| ACTCCCAAGGGTAAACCATC+TGG | - | chr7_3:2581993-2582012 | Msa1089240:intron | 50.0% | |
| CTCCCAAGGGTAAACCATCT+GGG | - | chr7_3:2581994-2582013 | Msa1089240:intron | 50.0% | |
| GACCCAGATGGTTTACCCTT+GGG | + | chr7_3:2581999-2582018 | None:intergenic | 50.0% | |
| AGACCCAGATGGTTTACCCT+TGG | + | chr7_3:2582000-2582019 | None:intergenic | 50.0% | |
| GGAGAAGGAGTAGCATTGCT+TGG | + | chr7_3:2582032-2582051 | None:intergenic | 50.0% | |
| GGTGTAGCAGCAACATTGAC+CGG | + | chr7_3:2582116-2582135 | None:intergenic | 50.0% | |
| CTCAAGCTCAGACTCCGATT+CGG | - | chr7_3:2582135-2582154 | Msa1089240:intron | 50.0% | |
| TGGCTAGTAGGAGTCCGAAT+CGG | + | chr7_3:2582152-2582171 | None:intergenic | 50.0% | |
| ! | TTCTGAGAAGGCTGGCTAGT+AGG | + | chr7_3:2582164-2582183 | None:intergenic | 50.0% |
| !! | TGGGGGTTTCTCTAAAACCC+CGG | - | chr7_3:2583214-2583233 | Msa1089240:intron | 50.0% |
| !! | CTCTAAAACCCCGGAATTCC+TGG | - | chr7_3:2583223-2583242 | Msa1089240:intron | 50.0% |
| TCCATTTGCCAGGAATTCCG+GGG | + | chr7_3:2583234-2583253 | None:intergenic | 50.0% | |
| CTCCATTTGCCAGGAATTCC+GGG | + | chr7_3:2583235-2583254 | None:intergenic | 50.0% | |
| GGAATTCCTGGCAAATGGAG+TGG | - | chr7_3:2583235-2583254 | Msa1089240:intron | 50.0% | |
| ACCCAGCTTGAACCCTGAAT+TGG | - | chr7_3:2583302-2583321 | Msa1089240:intron | 50.0% | |
| GAGGTGAGGTGACTTTCATG+GGG | - | chr7_3:2583759-2583778 | Msa1089240:intron | 50.0% | |
| AGGTGAGGTGACTTTCATGG+GGG | - | chr7_3:2583760-2583779 | Msa1089240:intron | 50.0% | |
| AGAGAGTTTGGGCAATTGGG+AGG | + | chr7_3:2584191-2584210 | None:intergenic | 50.0% | |
| GGGGATCTTCTTGAGATGGT+TGG | + | chr7_3:2584246-2584265 | None:intergenic | 50.0% | |
| AGTCGGGGATCTTCTTGAGA+TGG | + | chr7_3:2584250-2584269 | None:intergenic | 50.0% | |
| TGAGGTCCCGAGGAAGTTAA+AGG | + | chr7_3:2584278-2584297 | None:intergenic | 50.0% | |
| ! | CATTATAGGTTGAGGTCCCG+AGG | + | chr7_3:2584288-2584307 | None:intergenic | 50.0% |
| !! | TCCTTGCTTTTGTGTTCGGG+TGG | - | chr7_3:2584543-2584562 | Msa1089240:intron | 50.0% |
| TCCACCCGAACACAAAAGCA+AGG | + | chr7_3:2584547-2584566 | None:intergenic | 50.0% | |
| ! | GCAAGTTGTGCTTTTGCTGC+AGG | + | chr7_3:2584717-2584736 | None:intergenic | 50.0% |
| CCCCTGTTGTTACAGTCAAG+TGG | - | chr7_3:2585582-2585601 | Msa1089240:intron | 50.0% | |
| TAAACACAAACACGGGGAGG+GGG | + | chr7_3:2585666-2585685 | None:intergenic | 50.0% | |
| !! | TCTTGAGTCCGTGTTGCTTG+AGG | - | chr7_3:2585744-2585763 | Msa1089240:intron | 50.0% |
| CTCTCCTTCCTCAAGCAACA+CGG | + | chr7_3:2585755-2585774 | None:intergenic | 50.0% | |
| !! | GTGTTGCTTGAGGAAGGAGA+GGG | - | chr7_3:2585754-2585773 | Msa1089240:intron | 50.0% |
| ! | TGTTGCTTGAGGAAGGAGAG+GGG | - | chr7_3:2585755-2585774 | Msa1089240:intron | 50.0% |
| AAGGAGAGGGGGATAGAGAA+GGG | - | chr7_3:2585767-2585786 | Msa1089240:intron | 50.0% | |
| GATAAAGGACACCTCAGTGG+GGG | - | chr7_3:2585988-2586007 | Msa1089240:intron | 50.0% | |
| ! | CCTGGCAGGTCCATTTCTTT+TGG | + | chr7_3:2586046-2586065 | None:intergenic | 50.0% |
| CCAAAAGAAATGGACCTGCC+AGG | - | chr7_3:2586043-2586062 | Msa1089240:intron | 50.0% | |
| !! | TTTTGGCTACTGCAGCAGTC+AGG | - | chr7_3:2586155-2586174 | Msa1089240:intron | 50.0% |
| TTTGGCTACTGCAGCAGTCA+GGG | - | chr7_3:2586156-2586175 | Msa1089240:intron | 50.0% | |
| TCTGTGATGGCAGGTATGCT+CGG | - | chr7_3:2586340-2586359 | Msa1089240:intron | 50.0% | |
| GCGAGTATTTGACCGAGCTC+AGG | + | chr7_3:2580443-2580462 | None:intergenic | 55.0% | |
| !! | GCATTGGCTAGAGCTAGAGC+AGG | + | chr7_3:2580699-2580718 | None:intergenic | 55.0% |
| GGAGTAGCATTGCTTGGAGC+AGG | + | chr7_3:2582026-2582045 | None:intergenic | 55.0% | |
| CGAATCGGAGTCTGAGCTTG+AGG | + | chr7_3:2582137-2582156 | None:intergenic | 55.0% | |
| ACCCCGGAATTCCTGGCAAA+TGG | - | chr7_3:2583230-2583249 | Msa1089240:intron | 55.0% | |
| GTCACTCCACTCCATTTGCC+AGG | + | chr7_3:2583244-2583263 | None:intergenic | 55.0% | |
| !! | GAGTCCGTGTTGCTTGAGGA+AGG | - | chr7_3:2585748-2585767 | Msa1089240:intron | 55.0% |
| !! | CGTGTTGCTTGAGGAAGGAG+AGG | - | chr7_3:2585753-2585772 | Msa1089240:intron | 55.0% |
| GTTGCTTGAGGAAGGAGAGG+GGG | - | chr7_3:2585756-2585775 | Msa1089240:intron | 55.0% | |
| GAAGGAGAGGGGGATAGAGA+AGG | - | chr7_3:2585766-2585785 | Msa1089240:intron | 55.0% | |
| AGCTAACTTCACCCCCACTG+AGG | + | chr7_3:2586002-2586021 | None:intergenic | 55.0% | |
| GGAGCAGGAGAAGACCCAGA+TGG | + | chr7_3:2582011-2582030 | None:intergenic | 60.0% | |
| ! | GGAGTACCAGGAGCAGGAGA+CGG | + | chr7_3:2582053-2582072 | None:intergenic | 60.0% |
| !! | GCAGAAGCAGCAGGAGTACC+AGG | + | chr7_3:2582065-2582084 | None:intergenic | 60.0% |
| ! | GGTACTCCTGCTGCTTCTGC+TGG | - | chr7_3:2582065-2582084 | Msa1089240:intron | 60.0% |
| ! | GGAGTACCAGCAGAAGCAGC+AGG | + | chr7_3:2582074-2582093 | None:intergenic | 60.0% |
| TGCTGCTGCTGCTGTTGCTC+CGG | - | chr7_3:2582094-2582113 | Msa1089240:intron | 60.0% | |
| ! | TGGAATCCCAGGTTCGGTCC+AGG | - | chr7_3:2585628-2585647 | Msa1089240:intron | 60.0% |
| ! | GGAATCCCAGGTTCGGTCCA+GGG | - | chr7_3:2585629-2585648 | Msa1089240:intron | 60.0% |
| ! | AGGGGGAAGTTTGGTGACCC+TGG | + | chr7_3:2585649-2585668 | None:intergenic | 60.0% |
| AACACGGGGAGGGGGAAGTT+TGG | + | chr7_3:2585658-2585677 | None:intergenic | 60.0% | |
| !! | AGCCTGCAGACTTGCTGACG+CGG | - | chr7_3:2586120-2586139 | Msa1089240:intron | 60.0% |
| CCAGGAGCAGGAGACGGAGA+AGG | + | chr7_3:2582047-2582066 | None:intergenic | 65.0% | |
| CCTTCTCCGTCTCCTGCTCC+TGG | - | chr7_3:2582044-2582063 | Msa1089240:intron | 65.0% | |
| !! | GCAGCAGGAGTACCAGGAGC+AGG | + | chr7_3:2582059-2582078 | None:intergenic | 65.0% |
| GGAGCAACAGCAGCAGCAGC+AGG | + | chr7_3:2582095-2582114 | None:intergenic | 65.0% | |
| GGTGACCCTGGACCGAACCT+GGG | + | chr7_3:2585637-2585656 | None:intergenic | 65.0% | |
| TGGTGACCCTGGACCGAACC+TGG | + | chr7_3:2585638-2585657 | None:intergenic | 65.0% | |
| CTCCGCGTCAGCAAGTCTGC+AGG | + | chr7_3:2586125-2586144 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 2580344 | 2586738 | 2580344 | ID=Msa1089240;Name=Msa1089240 |
| chr7_3 | mRNA | 2580344 | 2586738 | 2580344 | ID=Msa1089240-mRNA-1;Parent=Msa1089240;Name=Msa1089240-mRNA-1;_AED=0.10;_eAED=0.14;_QI=0|0.71|0.62|1|0.85|0.87|8|354|392 |
| chr7_3 | exon | 2580344 | 2580729 | 2580344 | ID=Msa1089240-mRNA-1:exon:1092;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2580829 | 2581111 | 2580829 | ID=Msa1089240-mRNA-1:exon:1091;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2582272 | 2582361 | 2582272 | ID=Msa1089240-mRNA-1:exon:1090;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2583321 | 2583405 | 2583321 | ID=Msa1089240-mRNA-1:exon:1089;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2584869 | 2585134 | 2584869 | ID=Msa1089240-mRNA-1:exon:1088;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2585319 | 2585513 | 2585319 | ID=Msa1089240-mRNA-1:exon:1087;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2586393 | 2586476 | 2586393 | ID=Msa1089240-mRNA-1:exon:1086;Parent=Msa1089240-mRNA-1 |
| chr7_3 | exon | 2586595 | 2586738 | 2586595 | ID=Msa1089240-mRNA-1:exon:1085;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2586595 | 2586738 | 2586595 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2586393 | 2586476 | 2586393 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2585319 | 2585513 | 2585319 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2584869 | 2585134 | 2584869 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2583321 | 2583405 | 2583321 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2582272 | 2582361 | 2582272 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2580829 | 2581111 | 2580829 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | CDS | 2580698 | 2580729 | 2580698 | ID=Msa1089240-mRNA-1:cds;Parent=Msa1089240-mRNA-1 |
| chr7_3 | three_prime_UTR | 2580344 | 2580697 | 2580344 | ID=Msa1089240-mRNA-1:three_prime_utr;Parent=Msa1089240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
