Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364130 | XP_003597561.2 | 71.429 | 56 | 14 | 1 | 1 | 54 | 1 | 56 | 8.22e-15 | 86.3 |
| Msa1364130 | XP_003597561.2 | 95.050 | 303 | 13 | 1 | 92 | 392 | 1 | 303 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364130 | sp|F4IEY4|TRB5_ARATH | 43.770 | 313 | 132 | 10 | 92 | 389 | 1 | 284 | 5.80e-64 | 209 |
| Msa1364130 | sp|F4IEY4|TRB5_ARATH | 61.404 | 57 | 20 | 1 | 1 | 55 | 1 | 57 | 9.72e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364130 | G7IS32 | 71.429 | 56 | 14 | 1 | 1 | 54 | 1 | 56 | 3.93e-15 | 86.3 |
| Msa1364130 | G7IS32 | 95.050 | 303 | 13 | 1 | 92 | 392 | 1 | 303 | 0.0 | 557 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1364130 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0224100 | Msa1364130 | 0.844015 | 9.819868e-59 | -8.615850e-47 |
| Msa1089240 | Msa1364130 | 0.983347 | 1.697701e-157 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364130 | MtrunA17_Chr2g0329921 | 95.050 | 303 | 13 | 1 | 92 | 392 | 1 | 303 | 0.0 | 557 |
| Msa1364130 | MtrunA17_Chr2g0329921 | 71.429 | 56 | 14 | 1 | 1 | 54 | 1 | 56 | 7.56e-19 | 86.3 |
| Msa1364130 | MtrunA17_Chr8g0342871 | 46.580 | 307 | 135 | 8 | 92 | 391 | 1 | 285 | 1.41e-76 | 238 |
| Msa1364130 | MtrunA17_Chr8g0342871 | 55.385 | 65 | 27 | 1 | 1 | 63 | 1 | 65 | 3.44e-15 | 75.5 |
| Msa1364130 | MtrunA17_Chr5g0401061 | 40.952 | 210 | 99 | 6 | 92 | 299 | 1 | 187 | 1.54e-34 | 129 |
| Msa1364130 | MtrunA17_Chr5g0401061 | 62.745 | 51 | 19 | 0 | 4 | 54 | 6 | 56 | 2.69e-14 | 73.2 |
| Msa1364130 | MtrunA17_Chr4g0054131 | 38.605 | 215 | 112 | 5 | 92 | 299 | 1 | 202 | 1.93e-33 | 127 |
| Msa1364130 | MtrunA17_Chr4g0054131 | 62.745 | 51 | 19 | 0 | 4 | 54 | 6 | 56 | 2.14e-14 | 73.6 |
| Msa1364130 | MtrunA17_Chr8g0384671 | 37.681 | 207 | 110 | 6 | 92 | 298 | 1 | 188 | 2.08e-29 | 115 |
| Msa1364130 | MtrunA17_Chr8g0384671 | 65.385 | 52 | 18 | 0 | 4 | 55 | 6 | 57 | 5.71e-16 | 77.8 |
| Msa1364130 | MtrunA17_Chr2g0293381 | 35.849 | 212 | 109 | 5 | 92 | 298 | 1 | 190 | 8.13e-29 | 114 |
| Msa1364130 | MtrunA17_Chr2g0293381 | 63.462 | 52 | 19 | 0 | 4 | 55 | 6 | 57 | 3.94e-15 | 75.5 |
| Msa1364130 | MtrunA17_Chr1g0166681 | 67.241 | 58 | 19 | 0 | 92 | 149 | 1 | 58 | 6.00e-20 | 87.0 |
| Msa1364130 | MtrunA17_Chr1g0166681 | 67.308 | 52 | 17 | 0 | 4 | 55 | 6 | 57 | 3.90e-16 | 76.3 |
| Msa1364130 | MtrunA17_Chr8g0383821 | 62.069 | 58 | 22 | 0 | 92 | 149 | 1 | 58 | 9.50e-19 | 82.0 |
| Msa1364130 | MtrunA17_Chr8g0383821 | 62.963 | 54 | 20 | 0 | 4 | 57 | 6 | 59 | 8.29e-17 | 76.6 |
| Msa1364130 | MtrunA17_Chr7g0260771 | 42.254 | 71 | 38 | 2 | 226 | 295 | 60 | 128 | 9.65e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364130 | AT1G72740.2 | 44.300 | 307 | 133 | 9 | 92 | 389 | 1 | 278 | 3.39e-67 | 214 |
| Msa1364130 | AT1G72740.2 | 61.404 | 57 | 20 | 1 | 1 | 55 | 1 | 57 | 1.09e-15 | 77.4 |
| Msa1364130 | AT1G72740.1 | 43.770 | 313 | 132 | 10 | 92 | 389 | 1 | 284 | 5.90e-65 | 209 |
| Msa1364130 | AT1G72740.1 | 61.404 | 57 | 20 | 1 | 1 | 55 | 1 | 57 | 9.88e-16 | 77.4 |
| Msa1364130 | AT1G17520.4 | 41.083 | 314 | 142 | 9 | 92 | 389 | 1 | 287 | 2.33e-54 | 182 |
| Msa1364130 | AT1G17520.4 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 9.80e-18 | 83.2 |
| Msa1364130 | AT1G17520.1 | 40.625 | 320 | 141 | 10 | 92 | 389 | 1 | 293 | 1.17e-52 | 177 |
| Msa1364130 | AT1G17520.1 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 9.29e-18 | 83.6 |
| Msa1364130 | AT1G17520.3 | 40.952 | 315 | 142 | 10 | 92 | 389 | 1 | 288 | 1.61e-52 | 177 |
| Msa1364130 | AT1G17520.3 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 1.01e-17 | 83.2 |
| Msa1364130 | AT1G17520.2 | 40.498 | 321 | 141 | 11 | 92 | 389 | 1 | 294 | 7.33e-51 | 172 |
| Msa1364130 | AT1G17520.2 | 59.722 | 72 | 20 | 2 | 1 | 63 | 1 | 72 | 9.41e-18 | 83.6 |
| Msa1364130 | AT1G49950.3 | 37.500 | 208 | 109 | 3 | 92 | 299 | 1 | 187 | 1.28e-30 | 119 |
| Msa1364130 | AT1G49950.3 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 7.14e-14 | 72.0 |
| Msa1364130 | AT1G49950.1 | 37.500 | 208 | 109 | 3 | 92 | 299 | 1 | 187 | 1.28e-30 | 119 |
| Msa1364130 | AT1G49950.1 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 7.14e-14 | 72.0 |
| Msa1364130 | AT1G49950.2 | 37.500 | 208 | 109 | 3 | 92 | 299 | 1 | 187 | 1.28e-30 | 119 |
| Msa1364130 | AT1G49950.2 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 7.14e-14 | 72.0 |
| Msa1364130 | AT5G67580.2 | 34.314 | 204 | 117 | 5 | 92 | 295 | 1 | 187 | 2.27e-24 | 102 |
| Msa1364130 | AT5G67580.2 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 3.45e-13 | 70.1 |
| Msa1364130 | AT5G67580.1 | 34.314 | 204 | 117 | 5 | 92 | 295 | 1 | 187 | 2.27e-24 | 102 |
| Msa1364130 | AT5G67580.1 | 61.538 | 52 | 20 | 0 | 4 | 55 | 6 | 57 | 3.45e-13 | 70.1 |
| Msa1364130 | AT3G49850.1 | 33.014 | 209 | 111 | 5 | 92 | 295 | 1 | 185 | 2.07e-22 | 96.7 |
| Msa1364130 | AT3G49850.1 | 60.784 | 51 | 20 | 0 | 5 | 55 | 7 | 57 | 1.45e-12 | 68.2 |
| Msa1364130 | AT3G49850.2 | 33.014 | 209 | 111 | 5 | 92 | 295 | 1 | 185 | 2.07e-22 | 96.7 |
| Msa1364130 | AT3G49850.2 | 60.784 | 51 | 20 | 0 | 5 | 55 | 7 | 57 | 1.45e-12 | 68.2 |
| Msa1364130 | AT1G54260.1 | 34.694 | 196 | 85 | 5 | 230 | 389 | 6 | 194 | 2.74e-22 | 94.0 |
| Msa1364130 | AT1G54240.1 | 31.638 | 177 | 95 | 8 | 232 | 389 | 57 | 226 | 2.92e-11 | 63.5 |
Find 86 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGTTCGCTTCACTTAATT+TGG | 0.214811 | tig0018106:-204650 | Msa1364130:exon |
| CCTGGCAGGTCCATTTCTTT+TGG | 0.234603 | tig0018106:+204974 | None:intergenic |
| ACAGAAAGATATTCAAAGTT+TGG | 0.268113 | tig0018106:-204836 | Msa1364130:CDS |
| AGTTTCGGAAGCTTCCTTTA+TGG | 0.269510 | tig0018106:+204922 | None:intergenic |
| ATGGCAGAATTTAACTTCTA+AGG | 0.272609 | tig0018106:-210406 | Msa1364130:CDS |
| CTCAAAGGAACTTGAAATAA+AGG | 0.282782 | tig0018106:+204534 | None:intergenic |
| TGATTGTTTACCAGGATAAA+TGG | 0.284224 | tig0018106:-210425 | Msa1364130:intron |
| AGAAATATGGTGCTGGAAAA+TGG | 0.290469 | tig0018106:-209342 | Msa1364130:CDS |
| CAGAAAGATATTCAAAGTTT+GGG | 0.300205 | tig0018106:-204835 | Msa1364130:CDS |
| ACGAACCTTGAGATCAATAT+TGG | 0.326871 | tig0018106:+209270 | None:intergenic |
| ACAGAAGAAGCGTTAGAAAA+AGG | 0.338386 | tig0018106:-210646 | Msa1364130:CDS |
| CATCAAGGTGTTCAGAAATA+TGG | 0.349929 | tig0018106:-209355 | Msa1364130:CDS |
| TGCATATGATGATGCCATAA+AGG | 0.370905 | tig0018106:-204936 | Msa1364130:CDS |
| ACAAAATGGTTACAAGATAA+AGG | 0.372290 | tig0018106:-205044 | Msa1364130:CDS |
| TCCTTATCATGCTGCTTCTT+CGG | 0.379902 | tig0018106:-210370 | Msa1364130:CDS |
| TGCTGCTGCTGCTGTTGCTC+CGG | 0.384625 | tig0018106:-208923 | Msa1364130:CDS |
| CATCACCTGCAGGTACAAAA+TGG | 0.394363 | tig0018106:-205058 | Msa1364130:intron |
| ACTCCCAAGGGTAAACCATC+TGG | 0.398706 | tig0018106:-209024 | Msa1364130:CDS |
| AAGTCTGCAGGCTAGAGTTT+CGG | 0.422011 | tig0018106:+204907 | None:intergenic |
| AGAAATACGGCGTCGGAAAG+TGG | 0.422049 | tig0018106:-210618 | Msa1364130:CDS |
| ACCACCTACACCAAAAGAAA+TGG | 0.427940 | tig0018106:-204984 | Msa1364130:CDS |
| GCAGAAGCAGCAGGAGTACC+AGG | 0.430652 | tig0018106:+208955 | None:intergenic |
| TGAAGCTCTATCAACAATCA+AGG | 0.441177 | tig0018106:-207322 | Msa1364130:CDS |
| GGTACTCCTGCTGCTTCTGC+TGG | 0.444786 | tig0018106:-208952 | Msa1364130:CDS |
| GCGAGTATTTGACCGAGCTC+AGG | 0.447776 | tig0018106:+210577 | None:intergenic |
| AGCATTTAAGTCAGAACCAT+TGG | 0.454179 | tig0018106:+207296 | None:intergenic |
| GACCCAGATGGTTTACCCTT+GGG | 0.462495 | tig0018106:+209021 | None:intergenic |
| CCTTCTCCGTCTCCTGCTCC+TGG | 0.470392 | tig0018106:-208973 | Msa1364130:CDS |
| AGACCCAGATGGTTTACCCT+TGG | 0.488584 | tig0018106:+209020 | None:intergenic |
| GGAGCAACAGCAGCAGCAGC+AGG | 0.489385 | tig0018106:+208925 | None:intergenic |
| GGAGTAGCATTGCTTGGAGC+AGG | 0.489776 | tig0018106:+208994 | None:intergenic |
| GGAGTACCAGCAGAAGCAGC+AGG | 0.492329 | tig0018106:+208946 | None:intergenic |
| TTCTGAGAAGGCTGGCTAGT+AGG | 0.497538 | tig0018106:+208856 | None:intergenic |
| CTCAAGCTCAGACTCCGATT+CGG | 0.498629 | tig0018106:-208882 | Msa1364130:CDS |
| AATTATTAGATGACCCTGGC+AGG | 0.501469 | tig0018106:+204960 | None:intergenic |
| ACCGAAGAAGCAGCATGATA+AGG | 0.505859 | tig0018106:+210369 | None:intergenic |
| ATTATACTGAGGGTAAATCT+TGG | 0.508478 | tig0018106:+208819 | None:intergenic |
| GCAGCAGGAGTACCAGGAGC+AGG | 0.512995 | tig0018106:+208961 | None:intergenic |
| TGCTATTATTAGCTTCATTG+AGG | 0.513608 | tig0018106:-207277 | Msa1364130:intron |
| GCATTTAAGTCAGAACCATT+GGG | 0.513681 | tig0018106:+207297 | None:intergenic |
| CTCAGAAAGAGAAGAGAGAT+GGG | 0.513728 | tig0018106:-209421 | Msa1364130:CDS |
| CTCCGCGTCAGCAAGTCTGC+AGG | 0.514816 | tig0018106:+204895 | None:intergenic |
| CACTAGGTGCAAAGTTAAGA+AGG | 0.516076 | tig0018106:-206256 | Msa1364130:CDS |
| CCGTTCCAATATTGATCTCA+AGG | 0.518952 | tig0018106:-209275 | Msa1364130:intron |
| GGAGAAGGAGTAGCATTGCT+TGG | 0.518958 | tig0018106:+208988 | None:intergenic |
| GGTGTAGCAGCAACATTGAC+CGG | 0.528722 | tig0018106:+208904 | None:intergenic |
| CTCCCAAGGGTAAACCATCT+GGG | 0.529021 | tig0018106:-209023 | Msa1364130:CDS |
| CCAAAAGAAATGGACCTGCC+AGG | 0.529549 | tig0018106:-204974 | Msa1364130:CDS |
| AACAACCTTGAGATCAGTGT+TGG | 0.530301 | tig0018106:+210546 | None:intergenic |
| GCTCAGAAAGAGAAGAGAGA+TGG | 0.531225 | tig0018106:-209422 | Msa1364130:CDS |
| CAAAATTTCAGAAGGACACT+AGG | 0.531519 | tig0018106:-206272 | Msa1364130:CDS |
| GAAATACGGCGTCGGAAAGT+GGG | 0.534166 | tig0018106:-210617 | Msa1364130:CDS |
| TTTGGCTACTGCAGCAGTCA+GGG | 0.538485 | tig0018106:-204861 | Msa1364130:CDS |
| CAGTCAAGGGAAACTTGAAA+AGG | 0.538946 | tig0018106:-206228 | Msa1364130:intron |
| GAAGAAGAAGCTCTGCATCA+AGG | 0.542831 | tig0018106:-209370 | Msa1364130:CDS |
| CTCAAAGTCAAAATTTCAGA+AGG | 0.543098 | tig0018106:-206280 | Msa1364130:CDS |
| TGGGAAATCAGAAGCAGAAG+TGG | 0.548959 | tig0018106:-209402 | Msa1364130:CDS |
| AAGATAAAGGACACCTCAGT+GGG | 0.554986 | tig0018106:-205031 | Msa1364130:CDS |
| GGAGTACCAGGAGCAGGAGA+CGG | 0.555301 | tig0018106:+208967 | None:intergenic |
| AAGAGATGGGAAATCAAAAG+TGG | 0.558180 | tig0018106:-210678 | None:intergenic |
| TTAAGAAGGCTTGTCAGTCA+AGG | 0.558246 | tig0018106:-206242 | Msa1364130:CDS |
| TGTCATAACTTGACATGTGT+TGG | 0.558378 | tig0018106:-204411 | Msa1364130:three_prime_UTR |
| GGTGTTCAGAAATATGGTGC+TGG | 0.564792 | tig0018106:-209349 | Msa1364130:CDS |
| CCAGGAGCAGGAGACGGAGA+AGG | 0.566651 | tig0018106:+208973 | None:intergenic |
| TAAGAAGGCTTGTCAGTCAA+GGG | 0.572247 | tig0018106:-206241 | Msa1364130:CDS |
| TGTCATCATTCTGAGAAGGC+TGG | 0.574703 | tig0018106:+208848 | None:intergenic |
| CGAATCGGAGTCTGAGCTTG+AGG | 0.575521 | tig0018106:+208883 | None:intergenic |
| CGAGTATTTGACCGAGCTCA+GGG | 0.577095 | tig0018106:+210578 | None:intergenic |
| TCGTTCCAACACTGATCTCA+AGG | 0.583235 | tig0018106:-210551 | Msa1364130:intron |
| CAAAAGAAATGGACCTGCCA+GGG | 0.589349 | tig0018106:-204973 | Msa1364130:CDS |
| TCAAAACCCTAAAACTCCCA+AGG | 0.596857 | tig0018106:-209037 | Msa1364130:CDS |
| TCTGTGATGGCAGGTATGCT+CGG | 0.596964 | tig0018106:-204677 | Msa1364130:intron |
| TGGCTAGTAGGAGTCCGAAT+CGG | 0.600441 | tig0018106:+208868 | None:intergenic |
| AAGATATTCAAAGTTTGGGG+AGG | 0.610909 | tig0018106:-204831 | Msa1364130:CDS |
| GCATTGTCATCATTCTGAGA+AGG | 0.619580 | tig0018106:+208844 | None:intergenic |
| AGCCTGCAGACTTGCTGACG+CGG | 0.625031 | tig0018106:-204897 | Msa1364130:CDS |
| AGAAAGATATTCAAAGTTTG+GGG | 0.625477 | tig0018106:-204834 | Msa1364130:CDS |
| GCAAAATTATTAGATGACCC+TGG | 0.640236 | tig0018106:+204956 | None:intergenic |
| CCTTGAGATCAATATTGGAA+CGG | 0.643002 | tig0018106:+209275 | None:intergenic |
| CAAAACCCTAAAACTCCCAA+GGG | 0.647393 | tig0018106:-209036 | Msa1364130:CDS |
| TCAACAATCAAGGATCCCAA+TGG | 0.653809 | tig0018106:-207312 | Msa1364130:CDS |
| GGTGTCAAGAAATACGGCGT+CGG | 0.659365 | tig0018106:-210625 | Msa1364130:CDS |
| GGAGCAGGAGAAGACCCAGA+TGG | 0.666811 | tig0018106:+209009 | None:intergenic |
| GATAAAGGACACCTCAGTGG+GGG | 0.678712 | tig0018106:-205029 | Msa1364130:CDS |
| CAAGATAAAGGACACCTCAG+TGG | 0.681785 | tig0018106:-205032 | Msa1364130:CDS |
| AGATAAAGGACACCTCAGTG+GGG | 0.739882 | tig0018106:-205030 | Msa1364130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTTTTTTTTTTTGAA+AGG | - | tig0018106:208062-208081 | Msa1364130:intron | 10.0% |
| !! | ATCATATAATATCAATATAA+AGG | + | tig0018106:209159-209178 | None:intergenic | 10.0% |
| !!! | AAAGGTTTAAATTTTTTATT+GGG | + | tig0018106:210425-210444 | None:intergenic | 10.0% |
| !!! | TAAAGGTTTAAATTTTTTAT+TGG | + | tig0018106:210426-210445 | None:intergenic | 10.0% |
| !! | TACTTCTCTAATTAATATTA+GGG | - | tig0018106:204458-204477 | Msa1364130:three_prime_UTR | 15.0% |
| !! | AATAAAAGATTAATGAGTTA+GGG | - | tig0018106:204923-204942 | Msa1364130:CDS | 15.0% |
| !! | ACAGTAAGTAATATAATTTA+GGG | - | tig0018106:206377-206396 | Msa1364130:intron | 15.0% |
| !! | AACAAAAATAAGATATATCA+TGG | + | tig0018106:207555-207574 | None:intergenic | 15.0% |
| !!! | TTGTACTTTTTATTTTTATC+AGG | - | tig0018106:207612-207631 | Msa1364130:intron | 15.0% |
| !!! | TTTTTGTTTTATACTTTTTG+AGG | - | tig0018106:208632-208651 | Msa1364130:intron | 15.0% |
| !! | ATAATATCAATATAAAGGAA+AGG | + | tig0018106:209154-209173 | None:intergenic | 15.0% |
| !!! | AAGGTTTAAATTTTTTATTG+GGG | + | tig0018106:210424-210443 | None:intergenic | 15.0% |
| !!! | TTTTGTGTTACTTTTTTTTT+TGG | - | tig0018106:210471-210490 | Msa1364130:intron | 15.0% |
| !!! | TTTGTGTTACTTTTTTTTTT+GGG | - | tig0018106:210472-210491 | Msa1364130:intron | 15.0% |
| !!! | TTTTTTTTTGGGAATAAAAT+TGG | - | tig0018106:210483-210502 | Msa1364130:intron | 15.0% |
| !! | CTACTTCTCTAATTAATATT+AGG | - | tig0018106:204457-204476 | Msa1364130:three_prime_UTR | 20.0% |
| !! | TCTAATTAATATTAGGGTTA+GGG | - | tig0018106:204464-204483 | Msa1364130:three_prime_UTR | 20.0% |
| !! | ATCCTAATATGTTAAATTTG+TGG | - | tig0018106:204845-204864 | Msa1364130:CDS | 20.0% |
| !! | TAATATGTTAAATTTGTGGT+GGG | - | tig0018106:204849-204868 | Msa1364130:CDS | 20.0% |
| !! | GAATAAAAGATTAATGAGTT+AGG | - | tig0018106:204922-204941 | Msa1364130:CDS | 20.0% |
| !! | ATTACAAGAACAAACTTATT+TGG | + | tig0018106:205002-205021 | None:intergenic | 20.0% |
| !!! | ACTAATTCTTAAGTTGTAAT+AGG | + | tig0018106:205188-205207 | None:intergenic | 20.0% |
| !!! | TTAATTATATGTGTTACTGT+CGG | + | tig0018106:205341-205360 | None:intergenic | 20.0% |
| !! | AATTTCACAAAAACATAAAC+TGG | + | tig0018106:205752-205771 | None:intergenic | 20.0% |
| !! | ACAAAATTACATAAAGAAAG+GGG | + | tig0018106:206187-206206 | None:intergenic | 20.0% |
| !! | CACAAAATTACATAAAGAAA+GGG | + | tig0018106:206188-206207 | None:intergenic | 20.0% |
| !! | TCACAAAATTACATAAAGAA+AGG | + | tig0018106:206189-206208 | None:intergenic | 20.0% |
| !! | GACAGTAAGTAATATAATTT+AGG | - | tig0018106:206376-206395 | Msa1364130:intron | 20.0% |
| !! | ATGGTAAGTTATATGATTTA+GGG | - | tig0018106:206448-206467 | Msa1364130:intron | 20.0% |
| !! | ACAAAATACTGAATTATGAA+TGG | - | tig0018106:206763-206782 | Msa1364130:intron | 20.0% |
| !! | CAAAATACTGAATTATGAAT+GGG | - | tig0018106:206764-206783 | Msa1364130:intron | 20.0% |
| !! | AAAATACTGAATTATGAATG+GGG | - | tig0018106:206765-206784 | Msa1364130:intron | 20.0% |
| !!! | CACATTCTTATTATACATTT+TGG | + | tig0018106:206954-206973 | None:intergenic | 20.0% |
| !!! | TGTGTTTTTTTAAAGATGAA+GGG | - | tig0018106:207349-207368 | Msa1364130:intron | 20.0% |
| !! | ATAATATGTTCTTAATTGAC+AGG | + | tig0018106:207582-207601 | None:intergenic | 20.0% |
| !! | TCAATTAAGAACATATTATG+AGG | - | tig0018106:207583-207602 | Msa1364130:intron | 20.0% |
| !! | CAATTAAGAACATATTATGA+GGG | - | tig0018106:207584-207603 | Msa1364130:intron | 20.0% |
| !!! | AAATATGCAATTTTTACATG+TGG | + | tig0018106:208447-208466 | None:intergenic | 20.0% |
| !!! | ACACAATCTCAAATTTTATT+TGG | + | tig0018106:208473-208492 | None:intergenic | 20.0% |
| !! | AATTTATTTACGAGTAGATA+GGG | + | tig0018106:210231-210250 | None:intergenic | 20.0% |
| !! | AAATTTATTTACGAGTAGAT+AGG | + | tig0018106:210232-210251 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCAACATTTAAAC+TGG | - | tig0018106:210363-210382 | Msa1364130:CDS | 20.0% |
| !!! | AGGTTTAAATTTTTTATTGG+GGG | + | tig0018106:210423-210442 | None:intergenic | 20.0% |
| !! | AAAAAGTAACACAAAAACAT+TGG | + | tig0018106:210467-210486 | None:intergenic | 20.0% |
| !!! | AAGTGGTTTTTTTTCTATAT+AGG | - | tig0018106:210521-210540 | Msa1364130:intron | 20.0% |
| !!! | TTTTTTTCTATATAGGAGAT+TGG | - | tig0018106:210528-210547 | Msa1364130:intron | 20.0% |
| ! | CTCTAATTAATATTAGGGTT+AGG | - | tig0018106:204463-204482 | Msa1364130:three_prime_UTR | 25.0% |
| ! | TCAATTGTGTCTATCATTAT+TGG | - | tig0018106:204519-204538 | Msa1364130:three_prime_UTR | 25.0% |
| ! | GTTATAATTGATTGTTTACC+AGG | - | tig0018106:204541-204560 | Msa1364130:three_prime_UTR | 25.0% |
| ! | GGAAAAACACTAATTATTTG+TGG | - | tig0018106:204716-204735 | Msa1364130:intron | 25.0% |
| ! | CACCACAAATTTAACATATT+AGG | + | tig0018106:204850-204869 | None:intergenic | 25.0% |
| ! | CTAATATGTTAAATTTGTGG+TGG | - | tig0018106:204848-204867 | Msa1364130:CDS | 25.0% |
| !! | AATTCTTAAGTTGTAATAGG+TGG | + | tig0018106:205185-205204 | None:intergenic | 25.0% |
| ! | ATTAGAACATGTCTAATTTG+AGG | + | tig0018106:205300-205319 | None:intergenic | 25.0% |
| ! | AATTAGACATGTTCTAATGT+CGG | - | tig0018106:205302-205321 | Msa1364130:intron | 25.0% |
| !!! | TTGACTAGTCTATTATTACT+CGG | - | tig0018106:205486-205505 | Msa1364130:intron | 25.0% |
| !!! | TTGTGATTGATTTTTTGTTC+AGG | - | tig0018106:205883-205902 | Msa1364130:intron | 25.0% |
| !!! | GATTTTTTGTTCAGGATAAA+TGG | - | tig0018106:205891-205910 | Msa1364130:intron | 25.0% |
| ! | GATGGTAAGTTATATGATTT+AGG | - | tig0018106:206447-206466 | Msa1364130:intron | 25.0% |
| ! | TATCCAATTTACTCTCAAAT+TGG | + | tig0018106:206475-206494 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAATTCAAAACC+AGG | - | tig0018106:206518-206537 | Msa1364130:intron | 25.0% |
| ! | TTTGCAAAAATTCAAAACCA+GGG | - | tig0018106:206519-206538 | Msa1364130:intron | 25.0% |
| !! | TTTGCCTAATTGCAAATTTT+AGG | - | tig0018106:206545-206564 | Msa1364130:intron | 25.0% |
| !! | TTGCCTAATTGCAAATTTTA+GGG | - | tig0018106:206546-206565 | Msa1364130:intron | 25.0% |
| ! | TAAATATACAATCCTTTCAG+AGG | + | tig0018106:206811-206830 | None:intergenic | 25.0% |
| !!! | AATTTTTCAAATGAGATGGA+GGG | + | tig0018106:207055-207074 | None:intergenic | 25.0% |
| !!! | TAATTTTTCAAATGAGATGG+AGG | + | tig0018106:207056-207075 | None:intergenic | 25.0% |
| !!! | GAGTAATTTTTCAAATGAGA+TGG | + | tig0018106:207059-207078 | None:intergenic | 25.0% |
| ! | TATGGGATATAATTGTATCA+TGG | + | tig0018106:207129-207148 | None:intergenic | 25.0% |
| ! | GAGACAAATTAACAATAGAT+GGG | - | tig0018106:207152-207171 | Msa1364130:intron | 25.0% |
| ! | AGACAAATTAACAATAGATG+GGG | - | tig0018106:207153-207172 | Msa1364130:intron | 25.0% |
| ! | CTATGAATTAAATGGAGAAT+TGG | + | tig0018106:207291-207310 | None:intergenic | 25.0% |
| ! | TCCATTTAATTCATAGAAAG+TGG | - | tig0018106:207295-207314 | Msa1364130:CDS | 25.0% |
| !!! | CTGTGTTTTTTTAAAGATGA+AGG | - | tig0018106:207348-207367 | Msa1364130:intron | 25.0% |
| !!! | AAAGTGTTCTGATTTTAACA+TGG | - | tig0018106:207404-207423 | Msa1364130:intron | 25.0% |
| !! | TTTTATCAGGTACAATTCAT+TGG | - | tig0018106:207625-207644 | Msa1364130:intron | 25.0% |
| ! | TACTTATGATCACTATTTAG+TGG | - | tig0018106:207761-207780 | Msa1364130:intron | 25.0% |
| ! | AAAGATCTTAGATTGAATTG+CGG | - | tig0018106:207846-207865 | Msa1364130:intron | 25.0% |
| ! | AATATGTAACGTCAATCATT+TGG | - | tig0018106:208014-208033 | Msa1364130:intron | 25.0% |
| ! | ATATGTAACGTCAATCATTT+GGG | - | tig0018106:208015-208034 | Msa1364130:intron | 25.0% |
| ! | AGAGGGACTAAAATAAAAAA+TGG | - | tig0018106:208269-208288 | Msa1364130:intron | 25.0% |
| ! | GAGGGACTAAAATAAAAAAT+GGG | - | tig0018106:208270-208289 | Msa1364130:intron | 25.0% |
| !!! | TTTGCCATTTATTTTTACAC+CGG | - | tig0018106:208384-208403 | Msa1364130:intron | 25.0% |
| !!! | TGAATTGATTTTAAACTCTC+CGG | + | tig0018106:208406-208425 | None:intergenic | 25.0% |
| ! | AAAATCAATTCATCAACTCA+AGG | - | tig0018106:208414-208433 | Msa1364130:intron | 25.0% |
| !! | GCTTTTTGATCTTTTAAATG+CGG | - | tig0018106:208587-208606 | Msa1364130:intron | 25.0% |
| !! | CTTTTTGATCTTTTAAATGC+GGG | - | tig0018106:208588-208607 | Msa1364130:intron | 25.0% |
| !!! | ATTTCTTTAAAGCATTACAG+AGG | + | tig0018106:208781-208800 | None:intergenic | 25.0% |
| !!! | GTTAGTTACTTATTTCTGTT+TGG | - | tig0018106:208899-208918 | Msa1364130:CDS | 25.0% |
| !! | TTTTTGAATTTCTGTCACAT+AGG | - | tig0018106:209037-209056 | Msa1364130:CDS | 25.0% |
| ! | ACAATAATTTCTTCAGCAAT+GGG | + | tig0018106:209198-209217 | None:intergenic | 25.0% |
| ! | GATAAGGATAACGAATAAAA+AGG | + | tig0018106:209249-209268 | None:intergenic | 25.0% |
| !!! | TATTTCTCACTGATTTTTTC+CGG | - | tig0018106:209344-209363 | Msa1364130:CDS | 25.0% |
| !!! | TTTTACTCTGTTACTTCTAA+TGG | - | tig0018106:209465-209484 | Msa1364130:intron | 25.0% |
| ! | TACTCAAATAAACACAAACA+CGG | + | tig0018106:209631-209650 | None:intergenic | 25.0% |
| !! | GTGTTTATTTGAGTATGTTT+TGG | - | tig0018106:209636-209655 | Msa1364130:intron | 25.0% |
| ! | ACAAAATGGTTACAAGATAA+AGG | - | tig0018106:209930-209949 | Msa1364130:intron | 25.0% |
| ! | ACAGAAAGATATTCAAAGTT+TGG | - | tig0018106:210138-210157 | Msa1364130:intron | 25.0% |
| ! | CAGAAAGATATTCAAAGTTT+GGG | - | tig0018106:210139-210158 | Msa1364130:intron | 25.0% |
| ! | AGAAAGATATTCAAAGTTTG+GGG | - | tig0018106:210140-210159 | Msa1364130:intron | 25.0% |
| ! | TTACTTGCATAACTTATAGT+TGG | + | tig0018106:210256-210275 | None:intergenic | 25.0% |
| !! | TAAAATGACCATTGTTCTTT+TGG | - | tig0018106:210273-210292 | Msa1364130:intron | 25.0% |
| ! | TGTTGAAACAAAAACACTAT+AGG | + | tig0018106:210356-210375 | None:intergenic | 25.0% |
| !! | TAAAAACATTTTTCACTGGA+TGG | + | tig0018106:210390-210409 | None:intergenic | 25.0% |
| !!! | TTTAAATTTTTTATTGGGGG+GGG | + | tig0018106:210420-210439 | None:intergenic | 25.0% |
| !!! | GTTTAAATTTTTTATTGGGG+GGG | + | tig0018106:210421-210440 | None:intergenic | 25.0% |
| !!! | GGTTTAAATTTTTTATTGGG+GGG | + | tig0018106:210422-210441 | None:intergenic | 25.0% |
| !! | GAAAAAGGTGTCAAGAAATA+CGG | - | tig0018106:204343-204362 | Msa1364130:three_prime_UTR | 30.0% |
| TGATTGTTTACCAGGATAAA+TGG | - | tig0018106:204549-204568 | Msa1364130:three_prime_UTR | 30.0% | |
| ! | TTAAATTCTGCCATTTATCC+TGG | + | tig0018106:204562-204581 | None:intergenic | 30.0% |
| ! | ATGGCAGAATTTAACTTCTA+AGG | - | tig0018106:204568-204587 | Msa1364130:three_prime_UTR | 30.0% |
| TCAAGTTCAAATTCTGATGA+AGG | - | tig0018106:204817-204836 | Msa1364130:CDS | 30.0% | |
| GGTTATTTGTTCATAAGACT+TGG | + | tig0018106:204981-205000 | None:intergenic | 30.0% | |
| ! | TCCTGTTTATCTTTTCTTCA+AGG | - | tig0018106:205054-205073 | Msa1364130:intron | 30.0% |
| ACCTTGAAGAAAAGATAAAC+AGG | + | tig0018106:205058-205077 | None:intergenic | 30.0% | |
| GATAGTATTTGTGTATTGCA+GGG | + | tig0018106:205230-205249 | None:intergenic | 30.0% | |
| AGATAGTATTTGTGTATTGC+AGG | + | tig0018106:205231-205250 | None:intergenic | 30.0% | |
| TAAGTGTTTAGTGTTAGTGT+AGG | - | tig0018106:205418-205437 | Msa1364130:intron | 30.0% | |
| !! | ACGTTTTGGTATTTATACCT+AGG | + | tig0018106:205446-205465 | None:intergenic | 30.0% |
| TAGGTATAAATACCAAAACG+TGG | - | tig0018106:205445-205464 | Msa1364130:intron | 30.0% | |
| ATAAATACCAAAACGTGGAA+AGG | - | tig0018106:205450-205469 | Msa1364130:intron | 30.0% | |
| TAAATACCAAAACGTGGAAA+GGG | - | tig0018106:205451-205470 | Msa1364130:intron | 30.0% | |
| ! | TTTTTGTTCAGGATAAATGG+CGG | - | tig0018106:205894-205913 | Msa1364130:intron | 30.0% |
| ATTATACTGAGGGTAAATCT+TGG | + | tig0018106:206158-206177 | None:intergenic | 30.0% | |
| TTACATAAAGAAAGGGGAAA+AGG | + | tig0018106:206181-206200 | None:intergenic | 30.0% | |
| AGGTGTAAACAAACAAATCA+GGG | + | tig0018106:206279-206298 | None:intergenic | 30.0% | |
| AAGGTGTAAACAAACAAATC+AGG | + | tig0018106:206280-206299 | None:intergenic | 30.0% | |
| TGCTCTATTCGTAAATTTCA+AGG | + | tig0018106:206299-206318 | None:intergenic | 30.0% | |
| ! | TGCCTAATTGCAAATTTTAG+GGG | - | tig0018106:206547-206566 | Msa1364130:intron | 30.0% |
| !! | ATTTTAGGGGTGTAAATGTT+CGG | - | tig0018106:206560-206579 | Msa1364130:intron | 30.0% |
| TTCAATTTCATTGGGTGAAT+TGG | - | tig0018106:206587-206606 | Msa1364130:intron | 30.0% | |
| TGGTGATTTACTCTTTGATT+TGG | - | tig0018106:206607-206626 | Msa1364130:intron | 30.0% | |
| !! | TTTACTCTTTGATTTGGTAC+TGG | - | tig0018106:206613-206632 | Msa1364130:intron | 30.0% |
| ! | GATAAAAGTACGAGTTTGAT+AGG | - | tig0018106:206635-206654 | Msa1364130:intron | 30.0% |
| ATGAGTTCTCATTAGATGTT+GGG | + | tig0018106:206690-206709 | None:intergenic | 30.0% | |
| !!! | CTGCATGATTTTTTCACAAT+AGG | + | tig0018106:206865-206884 | None:intergenic | 30.0% |
| CTTGATCCAACAATCAAAAT+CGG | + | tig0018106:206901-206920 | None:intergenic | 30.0% | |
| TTTGATTGTTGGATCAAGAT+TGG | - | tig0018106:206903-206922 | Msa1364130:intron | 30.0% | |
| ACCATCTGATTAAGATCATA+AGG | + | tig0018106:206979-206998 | None:intergenic | 30.0% | |
| !! | ATTTTTCAAATGAGATGGAG+GGG | + | tig0018106:207054-207073 | None:intergenic | 30.0% |
| TGAAAAATTACTCTTCACCA+AGG | - | tig0018106:207066-207085 | Msa1364130:intron | 30.0% | |
| GAAAAATTACTCTTCACCAA+GGG | - | tig0018106:207067-207086 | Msa1364130:intron | 30.0% | |
| TCTTCAAAAAGAAAATCCCT+TGG | + | tig0018106:207086-207105 | None:intergenic | 30.0% | |
| ATTGTATCATGGCATTTCTT+TGG | + | tig0018106:207118-207137 | None:intergenic | 30.0% | |
| !! | TGTTAATTTGTCTCGAGTAT+GGG | + | tig0018106:207146-207165 | None:intergenic | 30.0% |
| !! | TTGTTAATTTGTCTCGAGTA+TGG | + | tig0018106:207147-207166 | None:intergenic | 30.0% |
| CGAGACAAATTAACAATAGA+TGG | - | tig0018106:207151-207170 | Msa1364130:intron | 30.0% | |
| GACAAATTAACAATAGATGG+GGG | - | tig0018106:207154-207173 | Msa1364130:intron | 30.0% | |
| !! | GGTAGCAAATTGTTTTATTG+TGG | + | tig0018106:207242-207261 | None:intergenic | 30.0% |
| ! | GCCACTTTCTATGAATTAAA+TGG | + | tig0018106:207299-207318 | None:intergenic | 30.0% |
| ATTCATAGAAAGTGGCAAAT+AGG | - | tig0018106:207303-207322 | Msa1364130:CDS | 30.0% | |
| !! | TTTTTAAAGATGAAGGGCTT+AGG | - | tig0018106:207355-207374 | Msa1364130:intron | 30.0% |
| !! | TTTTAAAGATGAAGGGCTTA+GGG | - | tig0018106:207356-207375 | Msa1364130:intron | 30.0% |
| ! | TGCTATTATTAGCTTCATTG+AGG | - | tig0018106:207697-207716 | Msa1364130:intron | 30.0% |
| !!! | CATCAAAAGTGTTTTCCTTT+TGG | - | tig0018106:207954-207973 | Msa1364130:intron | 30.0% |
| !!! | TTTTTTTTGAAAGGCGATTG+TGG | - | tig0018106:208071-208090 | Msa1364130:intron | 30.0% |
| ! | ATAAGTGTTGCCAAATAAGA+AGG | + | tig0018106:208175-208194 | None:intergenic | 30.0% |
| TCAACCTATAATGTATCAGA+GGG | - | tig0018106:208252-208271 | Msa1364130:intron | 30.0% | |
| !! | AATTTCCTTGCTTTTGTGTT+CGG | - | tig0018106:208496-208515 | Msa1364130:intron | 30.0% |
| !!! | CTTCTGAAATTTTGACTTTG+AGG | + | tig0018106:208696-208715 | None:intergenic | 30.0% |
| CTCAAAGTCAAAATTTCAGA+AGG | - | tig0018106:208694-208713 | Msa1364130:intron | 30.0% | |
| ! | ACACACTATAAAGGAGTATA+AGG | + | tig0018106:208839-208858 | None:intergenic | 30.0% |
| AAAGAAAGTGACAGAAAATG+AGG | + | tig0018106:209082-209101 | None:intergenic | 30.0% | |
| AATATAAAGGAAAGGCTTCA+AGG | + | tig0018106:209146-209165 | None:intergenic | 30.0% | |
| CAATAATTTCTTCAGCAATG+GGG | + | tig0018106:209197-209216 | None:intergenic | 30.0% | |
| GACAATAATTTCTTCAGCAA+TGG | + | tig0018106:209199-209218 | None:intergenic | 30.0% | |
| AAGGATCCAGAAAGAAATTA+TGG | + | tig0018106:209230-209249 | None:intergenic | 30.0% | |
| TAACAAGTATGAAGTCAACA+AGG | + | tig0018106:209278-209297 | None:intergenic | 30.0% | |
| ! | ACTTCATACTTGTTAGATGT+GGG | - | tig0018106:209283-209302 | Msa1364130:CDS | 30.0% |
| !! | CAAGCAAAATGAAGCATTTT+TGG | + | tig0018106:209417-209436 | None:intergenic | 30.0% |
| ACATAGAACATACAACATTG+AGG | + | tig0018106:209440-209459 | None:intergenic | 30.0% | |
| ! | AACTGTGAGGACATTTTATT+TGG | - | tig0018106:209565-209584 | Msa1364130:intron | 30.0% |
| ACTCAAATAAACACAAACAC+GGG | + | tig0018106:209630-209649 | None:intergenic | 30.0% | |
| ! | ACTCTTTCTTTTTCTGCTAT+TGG | + | tig0018106:209670-209689 | None:intergenic | 30.0% |
| AAGATTGAACGTGTGTAAAA+TGG | - | tig0018106:209775-209794 | Msa1364130:intron | 30.0% | |
| ! | CGTCTAAAAACATTTTTCAC+TGG | + | tig0018106:210394-210413 | None:intergenic | 30.0% |
| !!! | TTAAATTTTTTATTGGGGGG+GGG | + | tig0018106:210419-210438 | None:intergenic | 30.0% |
| CTCAAAGGAACTTGAAATAA+AGG | + | tig0018106:210443-210462 | None:intergenic | 30.0% | |
| !! | ACAGAAGAAGCGTTAGAAAA+AGG | - | tig0018106:204328-204347 | Msa1364130:three_prime_UTR | 35.0% |
| ! | TACAAGGTGTTACACGATAA+TGG | - | tig0018106:204681-204700 | Msa1364130:intron | 35.0% |
| ! | CATCAAGGTGTTCAGAAATA+TGG | - | tig0018106:205619-205638 | Msa1364130:intron | 35.0% |
| ! | AGAAATATGGTGCTGGAAAA+TGG | - | tig0018106:205632-205651 | Msa1364130:intron | 35.0% |
| !! | CGAGTTTTTGACTGAATTGA+GGG | + | tig0018106:205675-205694 | None:intergenic | 35.0% |
| CCTTGAGATCAATATTGGAA+CGG | + | tig0018106:205702-205721 | None:intergenic | 35.0% | |
| ACGAACCTTGAGATCAATAT+TGG | + | tig0018106:205707-205726 | None:intergenic | 35.0% | |
| ! | TCGTTTTGTCTTCCTTAATC+AGG | - | tig0018106:205723-205742 | Msa1364130:intron | 35.0% |
| ! | CGTTTTGTCTTCCTTAATCA+GGG | - | tig0018106:205724-205743 | Msa1364130:intron | 35.0% |
| ATAAACCCTAACCCTGATTA+AGG | + | tig0018106:205738-205757 | None:intergenic | 35.0% | |
| ! | CGGAATTTGAATGTTTTTCC+TGG | - | tig0018106:205914-205933 | Msa1364130:intron | 35.0% |
| TTGTGTGTGGTTGTTTGATT+TGG | - | tig0018106:206234-206253 | Msa1364130:CDS | 35.0% | |
| GTGTAAACAAACAAATCAGG+GGG | + | tig0018106:206277-206296 | None:intergenic | 35.0% | |
| GGTGTAAACAAACAAATCAG+GGG | + | tig0018106:206278-206297 | None:intergenic | 35.0% | |
| !! | GATCTTTCTGTTGACTTGTA+AGG | - | tig0018106:206345-206364 | Msa1364130:intron | 35.0% |
| GACTTCAGAGACTAATTTGA+TGG | - | tig0018106:206429-206448 | Msa1364130:intron | 35.0% | |
| GGACCAATTTGAGAGTAAAT+TGG | - | tig0018106:206469-206488 | Msa1364130:intron | 35.0% | |
| CACCCCTAAAATTTGCAATT+AGG | + | tig0018106:206552-206571 | None:intergenic | 35.0% | |
| TTCACCCAATGAAATTGAAG+AGG | + | tig0018106:206586-206605 | None:intergenic | 35.0% | |
| TGAGTTCTCATTAGATGTTG+GGG | + | tig0018106:206689-206708 | None:intergenic | 35.0% | |
| GATGAGTTCTCATTAGATGT+TGG | + | tig0018106:206691-206710 | None:intergenic | 35.0% | |
| GCTTGTGTGGCAATAATAAT+AGG | + | tig0018106:206713-206732 | None:intergenic | 35.0% | |
| GATTACAAAATCAGCTTGTG+TGG | + | tig0018106:206726-206745 | None:intergenic | 35.0% | |
| TACTGAATTATGAATGGGGT+TGG | - | tig0018106:206769-206788 | Msa1364130:intron | 35.0% | |
| AATCCTTTCAGAGGAAAAAG+GGG | + | tig0018106:206802-206821 | None:intergenic | 35.0% | |
| CAATCCTTTCAGAGGAAAAA+GGG | + | tig0018106:206803-206822 | None:intergenic | 35.0% | |
| ACAATCCTTTCAGAGGAAAA+AGG | + | tig0018106:206804-206823 | None:intergenic | 35.0% | |
| !!! | TGTCATCCGATTTTGATTGT+TGG | - | tig0018106:206892-206911 | Msa1364130:intron | 35.0% |
| GGACTCAAAGTTAACAAAGT+GGG | + | tig0018106:206933-206952 | None:intergenic | 35.0% | |
| TGGACTCAAAGTTAACAAAG+TGG | + | tig0018106:206934-206953 | None:intergenic | 35.0% | |
| GCCTTATGATCTTAATCAGA+TGG | - | tig0018106:206975-206994 | Msa1364130:intron | 35.0% | |
| !! | TTTTTCAAATGAGATGGAGG+GGG | + | tig0018106:207053-207072 | None:intergenic | 35.0% |
| ATAGAAAGTGGCAAATAGGT+GGG | - | tig0018106:207307-207326 | Msa1364130:CDS | 35.0% | |
| TGAAGCTCTATCAACAATCA+AGG | - | tig0018106:207652-207671 | Msa1364130:intron | 35.0% | |
| GCATTTAAGTCAGAACCATT+GGG | + | tig0018106:207680-207699 | None:intergenic | 35.0% | |
| AGCATTTAAGTCAGAACCAT+TGG | + | tig0018106:207681-207700 | None:intergenic | 35.0% | |
| ! | TTATTAGCTTCATTGAGGTG+AGG | - | tig0018106:207702-207721 | Msa1364130:intron | 35.0% |
| TGGGAGTCATAAAACCTAAT+TGG | + | tig0018106:207876-207895 | None:intergenic | 35.0% | |
| !!! | CAAAAGTGTTTTCCTTTTGG+TGG | - | tig0018106:207957-207976 | Msa1364130:intron | 35.0% |
| CAAAATACCTTTCCACCAAA+AGG | + | tig0018106:207972-207991 | None:intergenic | 35.0% | |
| GTACAGTATGCATTTGATTG+TGG | - | tig0018106:208037-208056 | Msa1364130:intron | 35.0% | |
| GGCAACAAATTGATACGAAT+TGG | - | tig0018106:208092-208111 | Msa1364130:intron | 35.0% | |
| AAGTTAAAGGTAGTTAGTCG+GGG | + | tig0018106:208222-208241 | None:intergenic | 35.0% | |
| GAAGTTAAAGGTAGTTAGTC+GGG | + | tig0018106:208223-208242 | None:intergenic | 35.0% | |
| GGAAGTTAAAGGTAGTTAGT+CGG | + | tig0018106:208224-208243 | None:intergenic | 35.0% | |
| ! | CTAACTACCTTTAACTTCCT+CGG | - | tig0018106:208225-208244 | Msa1364130:intron | 35.0% |
| ! | TAACTACCTTTAACTTCCTC+GGG | - | tig0018106:208226-208245 | Msa1364130:intron | 35.0% |
| CTCTGATACATTATAGGTTG+AGG | + | tig0018106:208253-208272 | None:intergenic | 35.0% | |
| CTCAACCTATAATGTATCAG+AGG | - | tig0018106:208251-208270 | Msa1364130:intron | 35.0% | |
| TAGTCCCTCTGATACATTAT+AGG | + | tig0018106:208259-208278 | None:intergenic | 35.0% | |
| CTCTCCGGTGTAAAAATAAA+TGG | + | tig0018106:208391-208410 | None:intergenic | 35.0% | |
| !! | ATTTCCTTGCTTTTGTGTTC+GGG | - | tig0018106:208497-208516 | Msa1364130:intron | 35.0% |
| ! | GATTCCTTTTTATGGGAGTT+GGG | - | tig0018106:208522-208541 | Msa1364130:intron | 35.0% |
| ! | ATTCCTTTTTATGGGAGTTG+GGG | - | tig0018106:208523-208542 | Msa1364130:intron | 35.0% |
| ! | AGATCAAAAAGCACGATAGA+TGG | + | tig0018106:208579-208598 | None:intergenic | 35.0% |
| CAAAATTTCAGAAGGACACT+AGG | - | tig0018106:208702-208721 | Msa1364130:intron | 35.0% | |
| ACACTAAGCACACACTATAA+AGG | + | tig0018106:208848-208867 | None:intergenic | 35.0% | |
| GAGTTAAGTCAGTTTACTCT+TGG | - | tig0018106:208949-208968 | Msa1364130:CDS | 35.0% | |
| CAATGGGGATCACTAATATA+GGG | + | tig0018106:209182-209201 | None:intergenic | 35.0% | |
| GAAAGAAATTATGGAGTAGC+AGG | + | tig0018106:209221-209240 | None:intergenic | 35.0% | |
| GCTACTCCATAATTTCTTTC+TGG | - | tig0018106:209221-209240 | Msa1364130:intron | 35.0% | |
| GTCAACAAGGTAACATGATA+AGG | + | tig0018106:209265-209284 | None:intergenic | 35.0% | |
| ! | GACTTCATACTTGTTAGATG+TGG | - | tig0018106:209282-209301 | Msa1364130:CDS | 35.0% |
| ATGTCTAACATGAAAATCGC+CGG | + | tig0018106:209366-209385 | None:intergenic | 35.0% | |
| ! | CTCTGTTACTTCTAATGGTT+TGG | - | tig0018106:209470-209489 | Msa1364130:intron | 35.0% |
| ! | TGTTACTTCTAATGGTTTGG+AGG | - | tig0018106:209473-209492 | Msa1364130:intron | 35.0% |
| ! | GTTACTTCTAATGGTTTGGA+GGG | - | tig0018106:209474-209493 | Msa1364130:intron | 35.0% |
| !! | GCTCTAGGATTAATTGTAAC+AGG | - | tig0018106:209506-209525 | Msa1364130:intron | 35.0% |
| !! | GACATTTTATTTGGAATCCC+AGG | - | tig0018106:209574-209593 | Msa1364130:intron | 35.0% |
| ! | TTTATTTGGAATCCCAGGTT+CGG | - | tig0018106:209579-209598 | Msa1364130:intron | 35.0% |
| CTCAAATAAACACAAACACG+GGG | + | tig0018106:209629-209648 | None:intergenic | 35.0% | |
| GCAAAATTATTAGATGACCC+TGG | + | tig0018106:210021-210040 | None:intergenic | 35.0% | |
| ! | TGCATATGATGATGCCATAA+AGG | - | tig0018106:210038-210057 | Msa1364130:intron | 35.0% |
| AAGATATTCAAAGTTTGGGG+AGG | - | tig0018106:210143-210162 | Msa1364130:intron | 35.0% | |
| TCACAGAACCAAAAGAACAA+TGG | + | tig0018106:210284-210303 | None:intergenic | 35.0% | |
| !!! | TTGTTCTTTTGGTTCTGTGA+TGG | - | tig0018106:210284-210303 | Msa1364130:intron | 35.0% |
| ACTGTTCGCTTCACTTAATT+TGG | - | tig0018106:210324-210343 | Msa1364130:intron | 35.0% | |
| ! | CACAAAAACATTGGTCTCAA+AGG | + | tig0018106:210458-210477 | None:intergenic | 35.0% |
| !!! | GGTCTTTAGTTTTGTGAAAG+TGG | - | tig0018106:210504-210523 | Msa1364130:intron | 35.0% |
| TGTCATAACTTGACATGTGT+TGG | - | tig0018106:210563-210582 | Msa1364130:CDS | 35.0% | |
| !! | ATTTTGAAAGACCCTGAGCT+CGG | - | tig0018106:204385-204404 | Msa1364130:three_prime_UTR | 40.0% |
| AACAACCTTGAGATCAGTGT+TGG | + | tig0018106:204431-204450 | None:intergenic | 40.0% | |
| ! | TCCTTATCATGCTGCTTCTT+CGG | - | tig0018106:204604-204623 | Msa1364130:three_prime_UTR | 40.0% |
| AACACCTTGTAGAGTAGCAT+TGG | + | tig0018106:204672-204691 | None:intergenic | 40.0% | |
| !! | CGATAATGGAGCATAATTGC+AGG | - | tig0018106:204695-204714 | Msa1364130:intron | 40.0% |
| ATGTATCGAGTTCAAGGTCT+TGG | - | tig0018106:204885-204904 | Msa1364130:CDS | 40.0% | |
| TAGTGTTAGTGTAGGTTCCT+AGG | - | tig0018106:205426-205445 | Msa1364130:intron | 40.0% | |
| CTCAGAAAGAGAAGAGAGAT+GGG | - | tig0018106:205553-205572 | Msa1364130:intron | 40.0% | |
| !! | GCGAGTTTTTGACTGAATTG+AGG | + | tig0018106:205676-205695 | None:intergenic | 40.0% |
| CCGTTCCAATATTGATCTCA+AGG | - | tig0018106:205699-205718 | Msa1364130:intron | 40.0% | |
| TGTCTTCCTTAATCAGGGTT+AGG | - | tig0018106:205729-205748 | Msa1364130:intron | 40.0% | |
| GTCTTCCTTAATCAGGGTTA+GGG | - | tig0018106:205730-205749 | Msa1364130:intron | 40.0% | |
| TCAAAACCCTAAAACTCCCA+AGG | - | tig0018106:205937-205956 | Msa1364130:intron | 40.0% | |
| CAAAACCCTAAAACTCCCAA+GGG | - | tig0018106:205938-205957 | Msa1364130:intron | 40.0% | |
| ! | GTTTACCCTTGGGAGTTTTA+GGG | + | tig0018106:205946-205965 | None:intergenic | 40.0% |
| ! | GCATTGTCATCATTCTGAGA+AGG | + | tig0018106:206133-206152 | None:intergenic | 40.0% |
| GGGGAAAAGGATTATACTGA+GGG | + | tig0018106:206168-206187 | None:intergenic | 40.0% | |
| AGGGGAAAAGGATTATACTG+AGG | + | tig0018106:206169-206188 | None:intergenic | 40.0% | |
| ATTTGTGCGCAAATTGTGTG+TGG | - | tig0018106:206221-206240 | Msa1364130:intron | 40.0% | |
| !! | TGTGGTTGTTTGATTTGGAG+TGG | - | tig0018106:206239-206258 | Msa1364130:CDS | 40.0% |
| AAACAAATCAGGGGGCAAAT+TGG | + | tig0018106:206269-206288 | None:intergenic | 40.0% | |
| TTCGGCCTCTTCAATTTCAT+TGG | - | tig0018106:206578-206597 | Msa1364130:intron | 40.0% | |
| TCGGCCTCTTCAATTTCATT+GGG | - | tig0018106:206579-206598 | Msa1364130:intron | 40.0% | |
| AATTGGCACGTACCAATTCA+GGG | + | tig0018106:207274-207293 | None:intergenic | 40.0% | |
| CATAGAAAGTGGCAAATAGG+TGG | - | tig0018106:207306-207325 | Msa1364130:CDS | 40.0% | |
| TCAACAATCAAGGATCCCAA+TGG | - | tig0018106:207662-207681 | Msa1364130:intron | 40.0% | |
| TCACAGCAAGTCAAGCATTT+GGG | + | tig0018106:207895-207914 | None:intergenic | 40.0% | |
| ATCACAGCAAGTCAAGCATT+TGG | + | tig0018106:207896-207915 | None:intergenic | 40.0% | |
| ! | GTGTTTTCCTTTTGGTGGAA+AGG | - | tig0018106:207962-207981 | Msa1364130:intron | 40.0% |
| ATTGGAATTGCAGTACTGTG+AGG | - | tig0018106:208110-208129 | Msa1364130:intron | 40.0% | |
| AAGAAGGAAGGAGAGAGTTT+GGG | + | tig0018106:208159-208178 | None:intergenic | 40.0% | |
| TAAGAAGGAAGGAGAGAGTT+TGG | + | tig0018106:208160-208179 | None:intergenic | 40.0% | |
| CTCTCTCCTTCCTTCTTATT+TGG | - | tig0018106:208162-208181 | Msa1364130:intron | 40.0% | |
| GTGTTGCCAAATAAGAAGGA+AGG | + | tig0018106:208171-208190 | None:intergenic | 40.0% | |
| CAAAGCGACTGATATTGAAC+TGG | + | tig0018106:208368-208387 | None:intergenic | 40.0% | |
| !! | TTCGGGTGGATTCCTTTTTA+TGG | - | tig0018106:208514-208533 | Msa1364130:intron | 40.0% |
| !! | TCGGGTGGATTCCTTTTTAT+GGG | - | tig0018106:208515-208534 | Msa1364130:intron | 40.0% |
| ! | GGATTCCTTTTTATGGGAGT+TGG | - | tig0018106:208521-208540 | Msa1364130:intron | 40.0% |
| TGCGAAGTAAGCTACATTTC+TGG | + | tig0018106:208556-208575 | None:intergenic | 40.0% | |
| CACTAGGTGCAAAGTTAAGA+AGG | - | tig0018106:208718-208737 | Msa1364130:intron | 40.0% | |
| TTAAGAAGGCTTGTCAGTCA+AGG | - | tig0018106:208732-208751 | Msa1364130:intron | 40.0% | |
| TAAGAAGGCTTGTCAGTCAA+GGG | - | tig0018106:208733-208752 | Msa1364130:intron | 40.0% | |
| CAGTCAAGGGAAACTTGAAA+AGG | - | tig0018106:208746-208765 | Msa1364130:intron | 40.0% | |
| GATCCACTGTATTCCAAAGT+CGG | - | tig0018106:208991-209010 | Msa1364130:CDS | 40.0% | |
| !! | TAACCGACTTTGGAATACAG+TGG | + | tig0018106:208997-209016 | None:intergenic | 40.0% |
| !! | ACGCATTGATTAACCGACTT+TGG | + | tig0018106:209007-209026 | None:intergenic | 40.0% |
| GCAATGGGGATCACTAATAT+AGG | + | tig0018106:209183-209202 | None:intergenic | 40.0% | |
| GGAGGGAAAAAAATTGCTCT+AGG | - | tig0018106:209491-209510 | Msa1364130:intron | 40.0% | |
| ACCACTTGACTGTAACAACA+GGG | + | tig0018106:209543-209562 | None:intergenic | 40.0% | |
| AACCACTTGACTGTAACAAC+AGG | + | tig0018106:209544-209563 | None:intergenic | 40.0% | |
| AGTCAAGTGGTTTAACTGTG+AGG | - | tig0018106:209552-209571 | Msa1364130:intron | 40.0% | |
| AATAAACACAAACACGGGGA+GGG | + | tig0018106:209625-209644 | None:intergenic | 40.0% | |
| AAATAAACACAAACACGGGG+AGG | + | tig0018106:209626-209645 | None:intergenic | 40.0% | |
| !!! | TTGAGTATGTTTTGGCCACT+AGG | - | tig0018106:209644-209663 | Msa1364130:intron | 40.0% |
| !! | TTTTTCTGCTATTGGCCTAG+TGG | + | tig0018106:209662-209681 | None:intergenic | 40.0% |
| ! | CACGTTCAATCTTTCTAGCA+TGG | + | tig0018106:209768-209787 | None:intergenic | 40.0% |
| ! | TGTAACCATTTTGTACCTGC+AGG | + | tig0018106:209924-209943 | None:intergenic | 40.0% |
| AAGATAAAGGACACCTCAGT+GGG | - | tig0018106:209943-209962 | Msa1364130:intron | 40.0% | |
| ACCACCTACACCAAAAGAAA+TGG | - | tig0018106:209990-210009 | Msa1364130:intron | 40.0% | |
| !! | TCCATTTCTTTTGGTGTAGG+TGG | + | tig0018106:209994-210013 | None:intergenic | 40.0% |
| !! | AGGTCCATTTCTTTTGGTGT+AGG | + | tig0018106:209997-210016 | None:intergenic | 40.0% |
| AATTATTAGATGACCCTGGC+AGG | + | tig0018106:210017-210036 | None:intergenic | 40.0% | |
| AGTTTCGGAAGCTTCCTTTA+TGG | + | tig0018106:210055-210074 | None:intergenic | 40.0% | |
| !! | CGCGGAGAATAAGTCATTTT+TGG | - | tig0018106:210095-210114 | Msa1364130:intron | 40.0% |
| TCGTTCCAACACTGATCTCA+AGG | - | tig0018106:204423-204442 | Msa1364130:three_prime_UTR | 45.0% | |
| ACCGAAGAAGCAGCATGATA+AGG | + | tig0018106:204608-204627 | None:intergenic | 45.0% | |
| CTAGCCAATGCTACTCTACA+AGG | - | tig0018106:204665-204684 | Msa1364130:CDS | 45.0% | |
| AACTCGATACATCACAGGCA+AGG | + | tig0018106:204877-204896 | None:intergenic | 45.0% | |
| CCTTGAACTCGATACATCAC+AGG | + | tig0018106:204882-204901 | None:intergenic | 45.0% | |
| CCTGTGATGTATCGAGTTCA+AGG | - | tig0018106:204879-204898 | Msa1364130:CDS | 45.0% | |
| GGTCTTGGAATCGATGCTTA+TGG | - | tig0018106:204900-204919 | Msa1364130:CDS | 45.0% | |
| ! | CTCTTACCCTTTCCACGTTT+TGG | + | tig0018106:205460-205479 | None:intergenic | 45.0% |
| GCTCAGAAAGAGAAGAGAGA+TGG | - | tig0018106:205552-205571 | Msa1364130:intron | 45.0% | |
| TGGGAAATCAGAAGCAGAAG+TGG | - | tig0018106:205572-205591 | Msa1364130:intron | 45.0% | |
| GAAGAAGAAGCTCTGCATCA+AGG | - | tig0018106:205604-205623 | Msa1364130:intron | 45.0% | |
| GGTGTTCAGAAATATGGTGC+TGG | - | tig0018106:205625-205644 | Msa1364130:intron | 45.0% | |
| !!! | GGAGTTTTAGGGTTTTGACC+AGG | + | tig0018106:205935-205954 | None:intergenic | 45.0% |
| ! | GGTTTACCCTTGGGAGTTTT+AGG | + | tig0018106:205947-205966 | None:intergenic | 45.0% |
| ! | TGTCATCATTCTGAGAAGGC+TGG | + | tig0018106:206129-206148 | None:intergenic | 45.0% |
| TGCAATTAGGCAAAAGACCC+TGG | + | tig0018106:206539-206558 | None:intergenic | 45.0% | |
| ! | TGTCCCCTTTTTCCTCTGAA+AGG | - | tig0018106:206796-206815 | Msa1364130:intron | 45.0% |
| ! | AGGAAGCACGAATCACATGT+TGG | + | tig0018106:206845-206864 | None:intergenic | 45.0% |
| TGCACGATTGCATGAGTACA+TGG | - | tig0018106:207012-207031 | Msa1364130:intron | 45.0% | |
| ! | GATGGAGGGGGTTTTCAATT+TGG | + | tig0018106:207041-207060 | None:intergenic | 45.0% |
| ACTCCATTTGCCAGGAATTC+CGG | + | tig0018106:207193-207212 | None:intergenic | 45.0% | |
| ACCAATTCAGGGTTCAAGCT+GGG | + | tig0018106:207263-207282 | None:intergenic | 45.0% | |
| TACCAATTCAGGGTTCAAGC+TGG | + | tig0018106:207264-207283 | None:intergenic | 45.0% | |
| GAATTGGCACGTACCAATTC+AGG | + | tig0018106:207275-207294 | None:intergenic | 45.0% | |
| AGATGAAGGGCTTAGGGTTT+AGG | - | tig0018106:207362-207381 | Msa1364130:intron | 45.0% | |
| TTGAGGTGAGGTGACTTTCA+TGG | - | tig0018106:207714-207733 | Msa1364130:intron | 45.0% | |
| TGAGGTGAGGTGACTTTCAT+GGG | - | tig0018106:207715-207734 | Msa1364130:intron | 45.0% | |
| TGAATTGCGGCTGTCCAATT+AGG | - | tig0018106:207859-207878 | Msa1364130:intron | 45.0% | |
| AGGAGAGAGTTTGGGCAATT+GGG | + | tig0018106:208151-208170 | None:intergenic | 45.0% | |
| AAGGAGAGAGTTTGGGCAAT+TGG | + | tig0018106:208152-208171 | None:intergenic | 45.0% | |
| GGGATCTTCTTGAGATGGTT+GGG | + | tig0018106:208202-208221 | None:intergenic | 45.0% | |
| AGCGACTGATATTGAACTGG+TGG | + | tig0018106:208365-208384 | None:intergenic | 45.0% | |
| AGTCCCCAACTCCCATAAAA+AGG | + | tig0018106:208529-208548 | None:intergenic | 45.0% | |
| ! | TTTTATGGGAGTTGGGGACT+TGG | - | tig0018106:208529-208548 | Msa1364130:intron | 45.0% |
| TTTATGGGAGTTGGGGACTT+GGG | - | tig0018106:208530-208549 | Msa1364130:intron | 45.0% | |
| CATGTTAGACATGCGTCTGT+TGG | - | tig0018106:209374-209393 | Msa1364130:CDS | 45.0% | |
| CACTTGACTGTAACAACAGG+GGG | + | tig0018106:209541-209560 | None:intergenic | 45.0% | |
| CCACTTGACTGTAACAACAG+GGG | + | tig0018106:209542-209561 | None:intergenic | 45.0% | |
| ATAAACACAAACACGGGGAG+GGG | + | tig0018106:209624-209643 | None:intergenic | 45.0% | |
| ACTAATCAGTCATCACCTGC+AGG | - | tig0018106:209906-209925 | Msa1364130:intron | 45.0% | |
| CATCACCTGCAGGTACAAAA+TGG | - | tig0018106:209916-209935 | Msa1364130:intron | 45.0% | |
| CAAGATAAAGGACACCTCAG+TGG | - | tig0018106:209942-209961 | Msa1364130:intron | 45.0% | |
| AGATAAAGGACACCTCAGTG+GGG | - | tig0018106:209944-209963 | Msa1364130:intron | 45.0% | |
| CAAAAGAAATGGACCTGCCA+GGG | - | tig0018106:210001-210020 | Msa1364130:intron | 45.0% | |
| AAGTCTGCAGGCTAGAGTTT+CGG | + | tig0018106:210070-210089 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGTTCTGTGATGGC+AGG | - | tig0018106:210288-210307 | Msa1364130:intron | 45.0% |
| GGTGTCAAGAAATACGGCGT+CGG | - | tig0018106:204349-204368 | Msa1364130:three_prime_UTR | 50.0% | |
| ! | AGAAATACGGCGTCGGAAAG+TGG | - | tig0018106:204356-204375 | Msa1364130:three_prime_UTR | 50.0% |
| ! | GAAATACGGCGTCGGAAAGT+GGG | - | tig0018106:204357-204376 | Msa1364130:three_prime_UTR | 50.0% |
| CGAGTATTTGACCGAGCTCA+GGG | + | tig0018106:204399-204418 | None:intergenic | 50.0% | |
| ACTCCCAAGGGTAAACCATC+TGG | - | tig0018106:205950-205969 | Msa1364130:intron | 50.0% | |
| CTCCCAAGGGTAAACCATCT+GGG | - | tig0018106:205951-205970 | Msa1364130:intron | 50.0% | |
| GACCCAGATGGTTTACCCTT+GGG | + | tig0018106:205956-205975 | None:intergenic | 50.0% | |
| AGACCCAGATGGTTTACCCT+TGG | + | tig0018106:205957-205976 | None:intergenic | 50.0% | |
| GGAGAAGGAGTAGCATTGCT+TGG | + | tig0018106:205989-206008 | None:intergenic | 50.0% | |
| GGTGTAGCAGCAACATTGAC+CGG | + | tig0018106:206073-206092 | None:intergenic | 50.0% | |
| CTCAAGCTCAGACTCCGATT+CGG | - | tig0018106:206092-206111 | Msa1364130:intron | 50.0% | |
| TGGCTAGTAGGAGTCCGAAT+CGG | + | tig0018106:206109-206128 | None:intergenic | 50.0% | |
| ! | TTCTGAGAAGGCTGGCTAGT+AGG | + | tig0018106:206121-206140 | None:intergenic | 50.0% |
| !! | TGGGGGTTTCTCTAAAACCC+CGG | - | tig0018106:207171-207190 | Msa1364130:intron | 50.0% |
| !! | CTCTAAAACCCCGGAATTCC+TGG | - | tig0018106:207180-207199 | Msa1364130:intron | 50.0% |
| TCCATTTGCCAGGAATTCCG+GGG | + | tig0018106:207191-207210 | None:intergenic | 50.0% | |
| CTCCATTTGCCAGGAATTCC+GGG | + | tig0018106:207192-207211 | None:intergenic | 50.0% | |
| GGAATTCCTGGCAAATGGAG+TGG | - | tig0018106:207192-207211 | Msa1364130:intron | 50.0% | |
| ACCCAGCTTGAACCCTGAAT+TGG | - | tig0018106:207259-207278 | Msa1364130:intron | 50.0% | |
| GAGGTGAGGTGACTTTCATG+GGG | - | tig0018106:207716-207735 | Msa1364130:intron | 50.0% | |
| AGGTGAGGTGACTTTCATGG+GGG | - | tig0018106:207717-207736 | Msa1364130:intron | 50.0% | |
| AGAGAGTTTGGGCAATTGGG+AGG | + | tig0018106:208148-208167 | None:intergenic | 50.0% | |
| GGGGATCTTCTTGAGATGGT+TGG | + | tig0018106:208203-208222 | None:intergenic | 50.0% | |
| AGTCGGGGATCTTCTTGAGA+TGG | + | tig0018106:208207-208226 | None:intergenic | 50.0% | |
| TGAGGTCCCGAGGAAGTTAA+AGG | + | tig0018106:208235-208254 | None:intergenic | 50.0% | |
| ! | CATTATAGGTTGAGGTCCCG+AGG | + | tig0018106:208245-208264 | None:intergenic | 50.0% |
| !! | TCCTTGCTTTTGTGTTCGGG+TGG | - | tig0018106:208500-208519 | Msa1364130:intron | 50.0% |
| TCCACCCGAACACAAAAGCA+AGG | + | tig0018106:208504-208523 | None:intergenic | 50.0% | |
| ! | GCAAGTTGTGCTTTTGCTGC+AGG | + | tig0018106:208674-208693 | None:intergenic | 50.0% |
| CCCCTGTTGTTACAGTCAAG+TGG | - | tig0018106:209539-209558 | Msa1364130:intron | 50.0% | |
| TAAACACAAACACGGGGAGG+GGG | + | tig0018106:209623-209642 | None:intergenic | 50.0% | |
| !! | TCTTGAGTCCGTGTTGCTTG+AGG | - | tig0018106:209701-209720 | Msa1364130:intron | 50.0% |
| CTCTCCTTCCTCAAGCAACA+CGG | + | tig0018106:209712-209731 | None:intergenic | 50.0% | |
| !! | GTGTTGCTTGAGGAAGGAGA+GGG | - | tig0018106:209711-209730 | Msa1364130:intron | 50.0% |
| ! | TGTTGCTTGAGGAAGGAGAG+GGG | - | tig0018106:209712-209731 | Msa1364130:intron | 50.0% |
| AAGGAGAGGGGGATAGAGAA+GGG | - | tig0018106:209724-209743 | Msa1364130:intron | 50.0% | |
| GATAAAGGACACCTCAGTGG+GGG | - | tig0018106:209945-209964 | Msa1364130:intron | 50.0% | |
| ! | CCTGGCAGGTCCATTTCTTT+TGG | + | tig0018106:210003-210022 | None:intergenic | 50.0% |
| CCAAAAGAAATGGACCTGCC+AGG | - | tig0018106:210000-210019 | Msa1364130:intron | 50.0% | |
| !! | TTTTGGCTACTGCAGCAGTC+AGG | - | tig0018106:210112-210131 | Msa1364130:intron | 50.0% |
| TTTGGCTACTGCAGCAGTCA+GGG | - | tig0018106:210113-210132 | Msa1364130:intron | 50.0% | |
| TCTGTGATGGCAGGTATGCT+CGG | - | tig0018106:210297-210316 | Msa1364130:intron | 50.0% | |
| GCGAGTATTTGACCGAGCTC+AGG | + | tig0018106:204400-204419 | None:intergenic | 55.0% | |
| !! | GCATTGGCTAGAGCTAGAGC+AGG | + | tig0018106:204656-204675 | None:intergenic | 55.0% |
| GGAGTAGCATTGCTTGGAGC+AGG | + | tig0018106:205983-206002 | None:intergenic | 55.0% | |
| CGAATCGGAGTCTGAGCTTG+AGG | + | tig0018106:206094-206113 | None:intergenic | 55.0% | |
| ACCCCGGAATTCCTGGCAAA+TGG | - | tig0018106:207187-207206 | Msa1364130:intron | 55.0% | |
| GTCACTCCACTCCATTTGCC+AGG | + | tig0018106:207201-207220 | None:intergenic | 55.0% | |
| !! | GAGTCCGTGTTGCTTGAGGA+AGG | - | tig0018106:209705-209724 | Msa1364130:intron | 55.0% |
| !! | CGTGTTGCTTGAGGAAGGAG+AGG | - | tig0018106:209710-209729 | Msa1364130:intron | 55.0% |
| GTTGCTTGAGGAAGGAGAGG+GGG | - | tig0018106:209713-209732 | Msa1364130:intron | 55.0% | |
| GAAGGAGAGGGGGATAGAGA+AGG | - | tig0018106:209723-209742 | Msa1364130:intron | 55.0% | |
| AGCTAACTTCACCCCCACTG+AGG | + | tig0018106:209959-209978 | None:intergenic | 55.0% | |
| GGAGCAGGAGAAGACCCAGA+TGG | + | tig0018106:205968-205987 | None:intergenic | 60.0% | |
| ! | GGAGTACCAGGAGCAGGAGA+CGG | + | tig0018106:206010-206029 | None:intergenic | 60.0% |
| !! | GCAGAAGCAGCAGGAGTACC+AGG | + | tig0018106:206022-206041 | None:intergenic | 60.0% |
| ! | GGTACTCCTGCTGCTTCTGC+TGG | - | tig0018106:206022-206041 | Msa1364130:intron | 60.0% |
| ! | GGAGTACCAGCAGAAGCAGC+AGG | + | tig0018106:206031-206050 | None:intergenic | 60.0% |
| TGCTGCTGCTGCTGTTGCTC+CGG | - | tig0018106:206051-206070 | Msa1364130:intron | 60.0% | |
| ! | TGGAATCCCAGGTTCGGTCC+AGG | - | tig0018106:209585-209604 | Msa1364130:intron | 60.0% |
| ! | GGAATCCCAGGTTCGGTCCA+GGG | - | tig0018106:209586-209605 | Msa1364130:intron | 60.0% |
| ! | AGGGGGAAGTTTGGTGACCC+TGG | + | tig0018106:209606-209625 | None:intergenic | 60.0% |
| AACACGGGGAGGGGGAAGTT+TGG | + | tig0018106:209615-209634 | None:intergenic | 60.0% | |
| !! | AGCCTGCAGACTTGCTGACG+CGG | - | tig0018106:210077-210096 | Msa1364130:intron | 60.0% |
| CCAGGAGCAGGAGACGGAGA+AGG | + | tig0018106:206004-206023 | None:intergenic | 65.0% | |
| CCTTCTCCGTCTCCTGCTCC+TGG | - | tig0018106:206001-206020 | Msa1364130:intron | 65.0% | |
| !! | GCAGCAGGAGTACCAGGAGC+AGG | + | tig0018106:206016-206035 | None:intergenic | 65.0% |
| GGAGCAACAGCAGCAGCAGC+AGG | + | tig0018106:206052-206071 | None:intergenic | 65.0% | |
| GGTGACCCTGGACCGAACCT+GGG | + | tig0018106:209594-209613 | None:intergenic | 65.0% | |
| TGGTGACCCTGGACCGAACC+TGG | + | tig0018106:209595-209614 | None:intergenic | 65.0% | |
| CTCCGCGTCAGCAAGTCTGC+AGG | + | tig0018106:210082-210101 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018106 | gene | 204301 | 210695 | 204301 | ID=Msa1364130;Name=Msa1364130 |
| tig0018106 | mRNA | 204301 | 210695 | 204301 | ID=Msa1364130-mRNA-1;Parent=Msa1364130;Name=Msa1364130-mRNA-1;_AED=0.10;_eAED=0.14;_QI=0|0.71|0.62|1|1|1|8|354|392 |
| tig0018106 | exon | 204301 | 204686 | 204301 | ID=Msa1364130-mRNA-1:exon:13908;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 204786 | 205068 | 204786 | ID=Msa1364130-mRNA-1:exon:13907;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 206229 | 206318 | 206229 | ID=Msa1364130-mRNA-1:exon:13906;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 207278 | 207362 | 207278 | ID=Msa1364130-mRNA-1:exon:13905;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 208826 | 209091 | 208826 | ID=Msa1364130-mRNA-1:exon:13904;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 209276 | 209470 | 209276 | ID=Msa1364130-mRNA-1:exon:13903;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 210350 | 210433 | 210350 | ID=Msa1364130-mRNA-1:exon:13902;Parent=Msa1364130-mRNA-1 |
| tig0018106 | exon | 210552 | 210695 | 210552 | ID=Msa1364130-mRNA-1:exon:13901;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 210552 | 210695 | 210552 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 210350 | 210433 | 210350 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 209276 | 209470 | 209276 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 208826 | 209091 | 208826 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 207278 | 207362 | 207278 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 206229 | 206318 | 206229 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 204786 | 205068 | 204786 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | CDS | 204655 | 204686 | 204655 | ID=Msa1364130-mRNA-1:cds;Parent=Msa1364130-mRNA-1 |
| tig0018106 | three_prime_UTR | 204301 | 204654 | 204301 | ID=Msa1364130-mRNA-1:three_prime_utr;Parent=Msa1364130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
