AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0229610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0229610 MtrunA17_Chr1g0160671 79.717 212 37 3 1 206 24 235 1.06e-115 333
Msa0229610 MtrunA17_Chr1g0160731 63.806 268 77 7 4 266 26 278 4.86e-108 325
Msa0229610 MtrunA17_Chr1g0160731 94.030 67 4 0 204 270 312 378 6.64e-35 132
Msa0229610 MtrunA17_Chr1g0160771 62.132 272 77 6 1 266 31 282 3.24e-99 302
Msa0229610 MtrunA17_Chr1g0160771 95.522 67 3 0 204 270 316 382 5.63e-36 135
Msa0229610 MtrunA17_Chr1g0160581 57.971 276 89 10 3 264 22 284 1.05e-91 283
Msa0229610 MtrunA17_Chr1g0160581 95.522 67 3 0 204 270 320 386 3.77e-36 135
Msa0229610 MtrunA17_Chr1g0160681 91.045 67 6 0 204 270 80 146 2.03e-35 130
Msa0229610 MtrunA17_Chr1g0160541 77.941 68 13 1 1 66 22 89 8.17e-30 107
Msa0229610 MtrunA17_Chr3g0126611 32.751 229 136 8 2 218 30 252 5.45e-28 110
Msa0229610 MtrunA17_Chr1g0158311 72.727 66 18 0 205 270 304 369 8.91e-28 112
Msa0229610 MtrunA17_Chr1g0158311 31.884 207 112 7 3 200 27 213 4.44e-23 98.6
Msa0229610 MtrunA17_Chr6g0467701 67.164 67 22 0 204 270 49 115 2.82e-27 108
Msa0229610 MtrunA17_Chr6g0467641 32.246 276 116 10 34 270 31 274 3.40e-27 109
Msa0229610 MtrunA17_Chr1g0158181 38.288 222 120 9 7 215 53 270 5.81e-27 109
Msa0229610 MtrunA17_Chr1g0158181 60.606 66 26 0 205 270 342 407 5.84e-21 92.4
Msa0229610 MtrunA17_Chr1g0157941 67.164 67 22 0 204 270 274 340 1.62e-26 108
Msa0229610 MtrunA17_Chr6g0467681 58.140 86 31 1 190 270 260 345 2.15e-26 107
Msa0229610 MtrunA17_Chr1g0158321 64.179 67 24 0 204 270 49 115 4.42e-26 104
Msa0229610 MtrunA17_Chr1g0158531 69.697 66 20 0 205 270 306 371 6.42e-26 106
Msa0229610 MtrunA17_Chr1g0158531 31.100 209 114 7 3 200 26 215 1.46e-23 99.8
Msa0229610 MtrunA17_Chr6g0467661 56.977 86 32 1 190 270 260 345 9.40e-26 106
Msa0229610 MtrunA17_Chr1g0158051 34.848 264 156 11 3 253 25 285 9.72e-26 106
Msa0229610 MtrunA17_Chr1g0158051 59.701 67 27 0 205 271 320 386 2.39e-20 90.5
Msa0229610 MtrunA17_Chr3g0088341 55.814 86 33 1 190 270 274 359 1.26e-25 105
Msa0229610 MtrunA17_Chr4g0037001 34.862 218 122 9 15 219 45 255 1.54e-25 105
Msa0229610 MtrunA17_Chr4g0037001 65.278 72 25 0 199 270 318 389 1.16e-23 100
Msa0229610 MtrunA17_Chr1g0157871 65.672 67 23 0 204 270 276 342 1.69e-25 105
Msa0229610 MtrunA17_Chr1g0158391 55.814 86 33 1 190 270 253 338 4.80e-25 103
Msa0229610 MtrunA17_Chr1g0158471 64.179 67 24 0 204 270 293 359 1.03e-24 103
Msa0229610 MtrunA17_Chr1g0157801 64.179 67 24 0 205 271 314 380 1.54e-24 102
Msa0229610 MtrunA17_Chr1g0157801 33.019 212 123 8 5 205 26 229 1.92e-21 93.6
Msa0229610 MtrunA17_Chr1g0158511 64.179 67 24 0 204 270 293 359 1.94e-24 102
Msa0229610 MtrunA17_Chr1g0158771 67.164 67 22 0 204 270 304 370 2.15e-24 102
Msa0229610 MtrunA17_Chr1g0158771 31.056 161 105 3 14 172 44 200 1.37e-21 94.0
Msa0229610 MtrunA17_Chr1g0157781 65.672 67 23 0 205 271 319 385 3.58e-24 101
Msa0229610 MtrunA17_Chr1g0157781 32.314 229 136 8 2 215 23 247 6.93e-22 95.1
Msa0229610 MtrunA17_Chr1g0158711 61.194 67 26 0 204 270 276 342 4.43e-24 101
Msa0229610 MtrunA17_Chr8g0347101 32.719 217 124 8 2 207 18 223 5.89e-24 99.4
Msa0229610 MtrunA17_Chr1g0160531 62.687 67 25 0 204 270 139 205 1.49e-23 99.0
Msa0229610 MtrunA17_Chr1g0158611 63.636 66 24 0 205 270 67 132 2.11e-23 97.8
Msa0229610 MtrunA17_Chr1g0158651 63.636 66 24 0 205 270 323 388 6.14e-23 98.2
Msa0229610 MtrunA17_Chr1g0158651 33.182 220 112 12 2 207 43 241 1.65e-22 96.7
Msa0229610 MtrunA17_Chr1g0160701 63.636 66 24 0 205 270 361 426 8.93e-23 97.4
Msa0229610 MtrunA17_Chr6g0467711 60.000 70 28 0 200 269 412 481 2.33e-22 96.3
Msa0229610 MtrunA17_Chr1g0158101 32.174 230 141 9 7 225 31 256 2.88e-22 95.9
Msa0229610 MtrunA17_Chr1g0158101 59.184 49 20 0 205 253 324 372 6.32e-14 71.6
Msa0229610 MtrunA17_Chr1g0158441 58.571 70 29 0 200 269 40 109 4.38e-22 94.0
Msa0229610 MtrunA17_Chr1g0158091 60.000 70 28 0 200 269 83 152 1.06e-21 93.2
Msa0229610 MtrunA17_Chr1g0209471 59.701 67 27 0 204 270 78 144 1.16e-21 93.2
Msa0229610 MtrunA17_Chr1g0160661 62.121 66 25 0 205 270 368 433 1.29e-21 94.0
Msa0229610 MtrunA17_Chr7g0232421 58.209 67 28 0 204 270 78 144 1.83e-21 92.4
Msa0229610 MtrunA17_Chr1g0158411 62.121 66 25 0 204 269 420 485 2.48e-21 93.6
Msa0229610 MtrunA17_Chr1g0160561 60.606 66 26 0 205 270 362 427 3.02e-21 93.2
Msa0229610 MtrunA17_Chr7g0232441 59.701 67 27 0 204 270 338 404 3.49e-21 92.8
Msa0229610 MtrunA17_Chr1g0157901 69.811 53 16 0 218 270 1 53 3.66e-21 90.5
Msa0229610 MtrunA17_Chr1g0157971 57.143 70 30 0 202 271 315 384 4.04e-21 92.8
Msa0229610 MtrunA17_Chr1g0157971 29.825 228 140 7 3 216 26 247 6.18e-21 92.0
Msa0229610 MtrunA17_Chr1g0158131 60.000 70 28 0 200 269 215 284 4.35e-21 92.0
Msa0229610 MtrunA17_Chr1g0157811 57.143 70 30 0 200 269 211 280 4.70e-21 92.4
Msa0229610 MtrunA17_Chr1g0158351 67.925 53 17 0 218 270 1 53 5.01e-21 88.6
Msa0229610 MtrunA17_Chr1g0157791 57.143 70 30 0 200 269 398 467 5.48e-21 92.4
Msa0229610 MtrunA17_Chr1g0160761 59.091 66 27 0 205 270 351 416 6.92e-21 92.0
Msa0229610 MtrunA17_Chr1g0158151 58.571 70 29 0 200 269 397 466 8.61e-21 91.7
Msa0229610 MtrunA17_Chr1g0157911 56.944 72 29 1 200 269 408 479 8.83e-21 91.7
Msa0229610 MtrunA17_Chr1g0160711 59.091 66 27 0 205 270 344 409 9.42e-21 91.7
Msa0229610 MtrunA17_Chr1g0160721 59.091 66 27 0 205 270 367 432 1.04e-20 91.7
Msa0229610 MtrunA17_Chr1g0209481 59.701 67 27 0 204 270 223 289 1.19e-20 90.5
Msa0229610 MtrunA17_Chr4g0036991 71.429 56 16 0 214 269 339 394 2.39e-20 90.5
Msa0229610 MtrunA17_Chr1g0157951 57.143 70 30 0 200 269 192 261 2.57e-20 90.1
Msa0229610 MtrunA17_Chr1g0157991 57.143 70 30 0 200 269 405 474 2.71e-20 90.5
Msa0229610 MtrunA17_Chr1g0157861 55.556 72 30 1 200 269 444 515 2.73e-20 90.5
Msa0229610 MtrunA17_Chr1g0158041 58.571 70 29 0 200 269 402 471 2.81e-20 90.5
Msa0229610 MtrunA17_Chr1g0157931 55.556 72 30 1 200 269 282 353 3.21e-20 90.1
Msa0229610 MtrunA17_Chr3g0088321 55.714 70 31 0 200 269 64 133 3.28e-20 89.0
Msa0229610 MtrunA17_Chr1g0158341 55.714 70 31 0 200 269 40 109 5.48e-20 88.2
Msa0229610 MtrunA17_Chr1g0158191 69.643 56 17 0 214 269 416 471 7.56e-20 89.0
Msa0229610 MtrunA17_Chr1g0209401 54.930 71 32 0 200 270 65 135 7.88e-20 87.8
Msa0229610 MtrunA17_Chr1g0158541 59.155 71 28 1 200 269 406 476 1.80e-19 87.8
Msa0229610 MtrunA17_Chr1g0158301 59.155 71 28 1 200 269 404 474 2.52e-19 87.4
Msa0229610 MtrunA17_Chr1g0209411 50.704 71 35 0 200 270 305 375 3.31e-19 86.7
Msa0229610 MtrunA17_Chr1g0157881 54.167 72 31 1 200 269 475 546 3.40e-19 87.0
Msa0229610 MtrunA17_Chr1g0158761 55.882 68 29 1 204 270 349 416 4.75e-19 86.7
Msa0229610 MtrunA17_Chr1g0158631 56.716 67 28 1 204 269 398 464 5.53e-19 86.7
Msa0229610 MtrunA17_Chr1g0158751 55.224 67 29 1 204 269 110 176 5.96e-19 85.9
Msa0229610 MtrunA17_Chr6g0484071 51.765 85 36 1 190 269 55 139 8.08e-19 85.1
Msa0229610 MtrunA17_Chr1g0158571 55.224 67 29 1 204 269 227 293 9.64e-19 85.5
Msa0229610 MtrunA17_Chr1g0158661 53.731 67 30 1 204 269 384 450 2.98e-18 84.3
Msa0229610 MtrunA17_Chr6g0483851 55.714 70 31 0 200 269 422 491 4.60e-18 84.0
Msa0229610 MtrunA17_Chr6g0484051 56.061 66 29 0 204 269 364 429 5.06e-18 83.6
Msa0229610 MtrunA17_Chr6g0483811 52.857 70 33 0 200 269 70 139 3.46e-17 80.5
Msa0229610 MtrunA17_Chr6g0483821 54.286 70 32 0 200 269 371 440 4.21e-17 80.9
Msa0229610 MtrunA17_Chr7g0251001 56.061 66 29 0 204 269 74 139 5.10e-17 80.1
Msa0229610 MtrunA17_Chr7g0251061 56.061 66 29 0 204 269 363 428 5.29e-17 80.5
Msa0229610 MtrunA17_Chr6g0483981 54.286 70 32 0 200 269 279 348 5.84e-17 80.5
Msa0229610 MtrunA17_Chr6g0484021 54.286 70 32 0 200 269 318 387 6.25e-17 80.5
Msa0229610 MtrunA17_Chr1g0158701 63.265 49 18 0 222 270 22 70 6.94e-17 76.3
Msa0229610 MtrunA17_Chr8g0391231 55.224 67 30 0 204 270 350 416 9.86e-17 79.7
Msa0229610 MtrunA17_Chr7g0251051 53.030 66 31 0 204 269 328 393 1.11e-16 79.7
Msa0229610 MtrunA17_Chr6g0483791 52.857 70 33 0 200 269 381 450 1.57e-16 79.3
Msa0229610 MtrunA17_Chr6g0484041 52.857 70 33 0 200 269 334 403 1.59e-16 79.3
Msa0229610 MtrunA17_Chr7g0250931 51.765 85 35 2 190 269 545 628 1.66e-16 79.3
Msa0229610 MtrunA17_Chr1g0209511 52.239 67 32 0 204 270 332 398 1.67e-16 79.3
Msa0229610 MtrunA17_Chr7g0251071 53.030 66 31 0 204 269 368 433 3.97e-16 78.2
Msa0229610 MtrunA17_Chr6g0484091 49.254 67 34 0 204 270 18 84 6.05e-16 71.6
Msa0229610 MtrunA17_Chr8g0388231 27.391 230 149 9 5 218 31 258 2.01e-15 75.5
Msa0229610 MtrunA17_Chr7g0251081 47.126 87 41 1 190 271 121 207 2.40e-15 75.1
Msa0229610 MtrunA17_Chr7g0251101 50.000 66 33 0 204 269 374 439 2.91e-15 75.5
Msa0229610 MtrunA17_Chr2g0323301 52.113 71 32 2 200 269 506 575 6.57e-15 74.7
Msa0229610 MtrunA17_Chr1g0209501 50.704 71 35 0 200 270 320 390 6.67e-15 74.3
Msa0229610 MtrunA17_Chr4g0023071 49.315 73 35 2 200 271 507 578 1.62e-14 73.2
Msa0229610 MtrunA17_Chr1g0212821 50.000 66 33 0 204 269 97 162 7.46e-14 70.9
Msa0229610 MtrunA17_Chr4g0022331 48.485 66 34 0 204 269 547 612 1.16e-13 70.9
Msa0229610 MtrunA17_Chr7g0250901 58.929 56 22 1 214 269 28 82 1.20e-13 67.0
Msa0229610 MtrunA17_Chr1g0202331 46.479 71 37 1 200 269 543 613 2.45e-13 69.7
Msa0229610 MtrunA17_Chr1g0161631 44.286 70 39 0 200 269 484 553 3.37e-13 69.3
Msa0229610 MtrunA17_Chr8g0348661 46.269 67 36 0 205 271 502 568 3.89e-13 69.3
Msa0229610 MtrunA17_Chr7g0250741 48.485 66 34 0 204 269 549 614 4.30e-13 68.9
Msa0229610 MtrunA17_Chr6g0455651 43.210 81 45 1 192 271 119 199 6.66e-13 68.2
Msa0229610 MtrunA17_Chr7g0262521 39.189 74 43 1 200 271 357 430 1.83e-12 67.0
Msa0229610 MtrunA17_Chr7g0237341 49.254 67 32 2 204 269 527 592 2.05e-12 67.0
Msa0229610 MtrunA17_Chr7g0238401 51.515 66 31 1 204 269 362 426 2.16e-12 67.0
Msa0229610 MtrunA17_Chr6g0483801 26.570 207 127 8 4 191 37 237 3.16e-12 65.1
Msa0229610 MtrunA17_Chr5g0423891 48.611 72 36 1 200 270 174 245 3.87e-12 65.9
Msa0229610 MtrunA17_Chr2g0297911 50.000 72 34 1 200 269 86 157 4.48e-12 65.5
Msa0229610 MtrunA17_Chr3g0143961 44.444 72 39 1 200 270 79 150 4.49e-12 65.5
Msa0229610 MtrunA17_Chr6g0485761 43.056 72 40 1 200 270 306 377 5.09e-12 65.9
Msa0229610 MtrunA17_Chr3g0114851 45.833 72 38 1 199 269 532 603 6.62e-12 65.5
Msa0229610 MtrunA17_Chr7g0237351 40.909 66 39 0 204 269 528 593 7.14e-12 65.5
Msa0229610 MtrunA17_Chr3g0134321 40.909 66 39 0 204 269 419 484 7.22e-12 65.5
Msa0229610 MtrunA17_Chr5g0428581 43.662 71 39 1 200 269 56 126 7.96e-12 64.7
Msa0229610 MtrunA17_Chr2g0297961 37.405 131 73 4 147 269 27 156 8.89e-12 64.7
Msa0229610 MtrunA17_Chr5g0394021 39.773 88 49 2 186 269 318 405 1.06e-11 64.7
Msa0229610 MtrunA17_Chr2g0297921 48.485 66 33 1 205 269 160 225 1.13e-11 64.7
Msa0229610 MtrunA17_Chr7g0237331 46.269 67 34 2 204 269 528 593 1.79e-11 64.3
Msa0229610 MtrunA17_Chr1g0205771 45.070 71 38 1 200 269 355 425 1.83e-11 64.3
Msa0229610 MtrunA17_Chr6g0467301 45.070 71 37 2 200 269 503 572 2.00e-11 63.9
Msa0229610 MtrunA17_Chr2g0318191 46.575 73 33 2 200 269 26 95 2.04e-11 61.6
Msa0229610 MtrunA17_Chr2g0297951 50.000 66 32 1 205 269 149 214 2.61e-11 63.5
Msa0229610 MtrunA17_Chr5g0428571 42.254 71 40 1 200 269 310 380 2.86e-11 63.5
Msa0229610 MtrunA17_Chr3g0098401 46.667 75 36 3 200 271 89 162 3.66e-11 60.8
Msa0229610 MtrunA17_Chr2g0286281 48.649 74 34 3 200 270 100 172 3.69e-11 63.2
Msa0229610 MtrunA17_Chr1g0206451 43.662 71 39 1 200 269 384 454 3.83e-11 63.2
Msa0229610 MtrunA17_Chr4g0069241 40.845 71 42 0 199 269 78 148 4.03e-11 62.8
Msa0229610 MtrunA17_Chr2g0323341 45.238 84 43 3 188 269 407 489 4.22e-11 63.2
Msa0229610 MtrunA17_Chr3g0106151 39.394 66 40 0 204 269 520 585 4.83e-11 62.8
Msa0229610 MtrunA17_Chr5g0416311 40.789 76 41 2 196 270 96 168 4.94e-11 62.4
Msa0229610 MtrunA17_Chr7g0245221 40.000 80 47 1 192 270 624 703 5.04e-11 62.8
Msa0229610 MtrunA17_Chr1g0149381 46.479 71 36 2 200 269 513 582 5.13e-11 62.8
Msa0229610 MtrunA17_Chr7g0221711 42.647 68 38 1 204 270 637 704 5.33e-11 62.8
Msa0229610 MtrunA17_Chr4g0074651 45.205 73 38 2 200 270 134 206 6.12e-11 62.4
Msa0229610 MtrunA17_Chr7g0236161 39.726 73 43 1 200 271 482 554 6.30e-11 62.4
Msa0229610 MtrunA17_Chr7g0236121 39.726 73 43 1 200 271 516 588 6.31e-11 62.8
Msa0229610 MtrunA17_Chr6g0467281 45.070 71 37 2 200 269 498 567 6.54e-11 62.4
Msa0229610 MtrunA17_Chr7g0236201 39.726 73 43 1 200 271 482 554 6.68e-11 62.4
Msa0229610 MtrunA17_Chr4g0058561 39.437 71 42 1 200 269 367 437 6.69e-11 62.4
Msa0229610 MtrunA17_Chr7g0236231 42.466 73 41 1 200 271 530 602 8.38e-11 62.4
Msa0229610 MtrunA17_Chr4g0034931 41.176 68 39 1 204 270 155 222 8.60e-11 62.0
Msa0229610 MtrunA17_Chr8g0388201 27.027 222 127 9 15 206 43 259 9.22e-11 61.6
Msa0229610 MtrunA17_Chr4g0060531 45.763 59 31 1 213 270 116 174 9.65e-11 61.6
Msa0229610 MtrunA17_Chr5g0399521 32.530 166 92 8 15 172 29 182 9.71e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0229610 AT5G53110.1 33.636 220 121 9 14 218 41 250 2.08e-24 101
Msa0229610 AT2G46495.1 28.821 229 144 6 5 221 26 247 2.78e-24 100
Msa0229610 AT2G46495.2 29.583 240 151 6 5 233 26 258 7.28e-24 99.0
Msa0229610 AT2G25410.1 31.308 214 126 7 5 206 29 233 5.15e-23 97.4
Msa0229610 AT2G46494.1 31.163 215 123 8 15 221 46 243 5.00e-21 91.7
Msa0229610 AT1G66980.4 60.606 66 26 0 204 269 803 868 2.84e-20 90.9
Msa0229610 AT1G66980.1 58.571 70 29 0 200 269 816 885 3.50e-20 90.5
Msa0229610 AT1G66980.2 58.571 70 29 0 200 269 845 914 3.52e-20 90.5
Msa0229610 AT1G66980.3 58.571 70 29 0 200 269 843 912 3.83e-20 90.5
Msa0229610 AT1G66910.2 55.714 70 31 0 200 269 356 425 1.85e-19 88.2
Msa0229610 AT1G66910.1 55.714 70 31 0 200 269 359 428 2.24e-19 88.2
Msa0229610 AT5G38280.2 51.163 86 36 1 190 269 327 412 3.10e-18 84.7
Msa0229610 AT5G38280.1 51.163 86 36 1 190 269 327 412 3.24e-18 84.7
Msa0229610 AT1G66920.2 53.521 71 32 1 200 269 318 388 3.25e-17 81.6
Msa0229610 AT1G66920.1 53.521 71 32 1 200 269 310 380 3.35e-17 81.6
Msa0229610 AT5G38250.1 53.425 73 34 0 200 272 325 397 8.80e-17 80.5
Msa0229610 AT4G18250.1 60.714 56 22 0 214 269 382 437 2.00e-16 79.3
Msa0229610 AT1G67000.1 53.521 71 32 1 200 269 567 637 2.61e-16 79.0
Msa0229610 AT1G66930.1 38.261 115 68 2 156 269 315 427 4.64e-16 78.2
Msa0229610 AT1G66930.2 38.261 115 68 2 156 269 524 636 6.40e-16 77.8
Msa0229610 AT1G70250.1 58.929 56 23 0 214 269 485 540 2.90e-15 75.9
Msa0229610 AT5G38260.1 52.857 70 33 0 200 269 332 401 3.20e-15 75.9
Msa0229610 AT5G39020.1 52.857 70 33 0 200 269 507 576 3.32e-15 75.9
Msa0229610 AT5G39030.2 51.429 70 34 0 200 269 503 572 3.37e-15 75.9
Msa0229610 AT5G39030.1 51.429 70 34 0 200 269 509 578 3.41e-15 75.9
Msa0229610 AT5G38240.1 52.055 73 35 0 200 272 346 418 6.23e-15 74.7
Msa0229610 AT5G38240.2 52.055 73 35 0 200 272 328 400 6.39e-15 74.7
Msa0229610 AT5G38240.3 52.055 73 35 0 200 272 282 354 6.59e-15 74.7
Msa0229610 AT4G23180.3 47.887 71 36 1 200 269 359 429 2.18e-13 70.1
Msa0229610 AT4G23180.1 47.887 71 36 1 200 269 359 429 2.79e-13 70.1
Msa0229610 AT4G23180.2 47.887 71 36 1 200 269 359 429 2.82e-13 70.1
Msa0229610 AT5G36001.1 29.767 215 125 8 9 219 34 226 3.22e-13 68.9
Msa0229610 AT5G36001.2 30.612 196 113 7 9 200 34 210 4.42e-13 67.4
Msa0229610 AT5G24080.3 43.662 71 39 1 200 269 414 484 6.14e-13 68.9
Msa0229610 AT5G24080.1 43.662 71 39 1 200 269 414 484 6.14e-13 68.9
Msa0229610 AT2G19130.1 49.315 73 35 2 200 271 504 575 7.02e-13 68.9
Msa0229610 AT5G24080.2 43.662 71 39 1 200 269 541 611 7.52e-13 68.9
Msa0229610 AT3G20530.1 50.000 74 33 3 200 270 93 165 4.44e-12 65.9
Msa0229610 AT3G20530.2 50.000 74 33 3 200 270 93 165 4.58e-12 65.5
Msa0229610 AT1G69790.2 46.667 60 31 1 212 270 106 165 4.60e-12 65.9
Msa0229610 AT1G69790.1 46.667 60 31 1 212 270 117 176 5.17e-12 65.9
Msa0229610 AT1G34300.1 46.479 71 36 2 200 269 495 564 7.99e-12 65.9
Msa0229610 AT4G23270.2 42.254 71 40 1 200 269 337 407 8.95e-12 65.5
Msa0229610 AT4G23270.1 42.254 71 40 1 200 269 337 407 8.95e-12 65.5
Msa0229610 AT4G23270.3 42.254 71 40 1 200 269 337 407 9.13e-12 65.5
Msa0229610 AT4G34440.2 44.118 68 37 1 204 270 327 394 2.05e-11 64.3
Msa0229610 AT4G34440.1 44.118 68 37 1 204 270 327 394 2.05e-11 64.3
Msa0229610 AT5G59670.2 44.444 72 39 1 200 270 575 646 2.71e-11 64.3
Msa0229610 AT5G59670.1 44.444 72 39 1 200 270 575 646 2.71e-11 64.3
Msa0229610 AT1G11280.4 43.836 73 40 1 200 271 514 586 3.26e-11 63.9
Msa0229610 AT1G11280.3 43.836 73 40 1 200 271 504 576 3.31e-11 63.9
Msa0229610 AT1G26150.1 40.845 71 41 1 200 269 441 511 3.32e-11 63.9
Msa0229610 AT1G11280.2 43.836 73 40 1 200 271 516 588 3.42e-11 63.9
Msa0229610 AT1G11280.1 43.836 73 40 1 200 271 526 598 3.53e-11 63.9
Msa0229610 AT1G26150.2 40.845 71 41 1 200 269 441 511 3.61e-11 63.5
Msa0229610 AT1G11280.5 43.836 73 40 1 200 271 516 588 3.62e-11 63.5
Msa0229610 AT1G52290.2 38.889 72 43 1 200 270 154 225 3.82e-11 63.2
Msa0229610 AT3G49670.1 31.100 209 109 10 76 269 585 773 4.15e-11 63.5
Msa0229610 AT1G52290.1 39.706 68 40 1 204 270 158 225 4.37e-11 63.2
Msa0229610 AT5G59680.1 46.970 66 34 1 206 270 597 662 5.95e-11 63.2
Msa0229610 AT4G11480.4 45.070 71 38 1 200 269 332 402 6.16e-11 62.8
Msa0229610 AT5G13160.1 48.649 74 34 3 200 270 97 169 6.27e-11 62.8
Msa0229610 AT4G11480.3 45.070 71 38 1 200 269 335 405 6.35e-11 62.8
Msa0229610 AT4G11480.1 45.070 71 38 1 200 269 332 402 6.48e-11 62.8
Msa0229610 AT4G32710.1 44.118 68 37 1 204 270 404 471 6.66e-11 62.8
Msa0229610 AT4G11480.2 45.070 71 38 1 200 269 335 405 6.92e-11 62.8
Msa0229610 AT1G07870.1 43.836 73 39 2 200 270 114 186 8.39e-11 62.4
Msa0229610 AT3G24790.1 43.836 73 39 2 200 270 58 130 9.31e-11 62.0
Msa0229610 AT3G24790.2 43.836 73 39 2 200 270 76 148 9.51e-11 62.0
Msa0229610 AT4G11530.1 42.254 71 40 1 200 269 363 433 9.55e-11 62.4

Find 42 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGAAACATTAAACATTT+TGG 0.159805 2_2:+1374546 None:intergenic
ACATCAAACGAAGAAAATTT+TGG 0.207005 2_2:+1374497 None:intergenic
AGATAAGATGGACTCATATT+TGG 0.233103 2_2:-1374653 Msa0229610:CDS
AACGAGATTCTGAAAGATTA+AGG 0.261708 2_2:+1374746 None:intergenic
GATTCGCAATGTGTGCAATT+AGG 0.287440 2_2:+1374466 None:intergenic
CTTGTTGGTAGTATTCTTCC+AGG 0.306427 2_2:+1374426 None:intergenic
GTTTCATTAAACAGCAAATC+TGG 0.312877 2_2:-1374532 Msa0229610:CDS
TGATTTCCACATGTTAAATC+TGG 0.321342 2_2:+1374973 None:intergenic
CCATTGTACCAACTTCATTA+AGG 0.334922 2_2:+1373409 None:intergenic
CTAAATGTTTCTCAAGGAAA+TGG 0.338122 2_2:-1373441 Msa0229610:CDS
TCATGTTAATATTGTTAGAT+TGG 0.356428 2_2:-1373376 Msa0229610:CDS
GATCAGATAGTTCAATAGTT+TGG 0.413327 2_2:+1374800 None:intergenic
CTTAATGAAGTTGGTACAAT+GGG 0.417148 2_2:-1373408 Msa0229610:CDS
GTTAATATTGTTAGATTGGT+CGG 0.432650 2_2:-1373372 Msa0229610:CDS
ATTCTGAAAGATTAAGGTTG+TGG 0.449477 2_2:+1374752 None:intergenic
TGTTTGTAAAGACAACTTTG+TGG 0.467945 2_2:+1374778 None:intergenic
CAAGACTTCCTTAATGAAGT+TGG 0.469341 2_2:-1373417 Msa0229610:CDS
TAAATGTTTCTCAAGGAAAT+GGG 0.471962 2_2:-1373440 Msa0229610:CDS
AACCACACATGGATGCTTGA+CGG 0.476998 2_2:+1374920 None:intergenic
GAAGCAATCTACATCCTTGT+TGG 0.477562 2_2:+1374411 None:intergenic
GCATCCATGTGTGGTTATGC+AGG 0.477823 2_2:-1374913 Msa0229610:CDS
GAACTTTGCAGTGAACCATT+CGG 0.502952 2_2:+1373303 None:intergenic
CGTTTCAACTACTTGAAACA+TGG 0.510040 2_2:-1374727 Msa0229610:CDS
ATCTAACAATATTAACATGA+TGG 0.512797 2_2:+1373379 None:intergenic
TGCACACATTGCGAATCAAA+AGG 0.519122 2_2:-1374460 Msa0229610:CDS
TTGGTCGGTTTCTGTGCAGA+TGG 0.522749 2_2:-1373357 Msa0229610:CDS
CAAAAGGAAACAGATGTGCC+TGG 0.530512 2_2:-1374444 Msa0229610:CDS
CCTTAATGAAGTTGGTACAA+TGG 0.550490 2_2:-1373409 Msa0229610:CDS
TAGTCGATTGATTCATAAGA+CGG 0.550837 2_2:+1374589 None:intergenic
ACATTGAGTTTCACCGAGCG+AGG 0.569059 2_2:+1374844 None:intergenic
AAGATACTAAATGTTTCTCA+AGG 0.572477 2_2:-1373447 Msa0229610:CDS
AGTTGTCCAGATTTAACATG+TGG 0.574158 2_2:-1374979 Msa0229610:CDS
AGTCGATTGATTCATAAGAC+GGG 0.578862 2_2:+1374590 None:intergenic
AATGATTGAACTCCCTCGCT+CGG 0.580318 2_2:-1374857 Msa0229610:CDS
CATTGAGTTTCACCGAGCGA+GGG 0.587615 2_2:+1374845 None:intergenic
CGGGATAGCGTATATTTGAG+AGG 0.588791 2_2:+1374609 None:intergenic
AAATCCTGCATAACCACACA+TGG 0.627419 2_2:+1374909 None:intergenic
AACCGTCAAGCATCCATGTG+TGG 0.631353 2_2:-1374922 Msa0229610:CDS
ATCTGGACAACTATTGACCA+TGG 0.637451 2_2:+1374990 None:intergenic
CTGGAAGAATACTACCAACA+AGG 0.638589 2_2:-1374425 Msa0229610:CDS
GAGGTTGATGTACTTAAACA+CGG 0.670085 2_2:+1374628 None:intergenic
TGGTGCAAAACGAAAGAGGG+AGG 0.672026 2_2:+1374566 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTGCTAAAAAATTAT+AGG + chr2_2:1374018-1374037 None:intergenic 10.0%
!!! ATATTTTGCTAAAAAATTAT+AGG + chr2_2:1374018-1374037 None:intergenic 10.0%
!!! TAATGAAACATTAAACATTT+TGG + chr2_2:1373744-1373763 None:intergenic 15.0%
!!! AAATTATTTTTCATAAATGC+AGG - chr2_2:1374496-1374515 Msa0229610:CDS 15.0%
!!! AATTATTTTTCATAAATGCA+GGG - chr2_2:1374497-1374516 Msa0229610:CDS 15.0%
!!! TAATGAAACATTAAACATTT+TGG + chr2_2:1373744-1373763 None:intergenic 15.0%
!!! AAATTATTTTTCATAAATGC+AGG - chr2_2:1374496-1374515 Msa0229610:CDS 15.0%
!!! AATTATTTTTCATAAATGCA+GGG - chr2_2:1374497-1374516 Msa0229610:CDS 15.0%
!! ATATGTTAACGACATAATAT+AGG + chr2_2:1373959-1373978 None:intergenic 20.0%
!!! TTCAATTTTTTTAGCTAACT+AGG - chr2_2:1374171-1374190 Msa0229610:intron 20.0%
!!! TTTGCAAGTTTGATTTTTAT+AGG - chr2_2:1374383-1374402 Msa0229610:intron 20.0%
!!! TTAAGAGAATCACATAATTT+TGG - chr2_2:1374674-1374693 Msa0229610:CDS 20.0%
!! ATCTAACAATATTAACATGA+TGG + chr2_2:1374911-1374930 None:intergenic 20.0%
!! TCATGTTAATATTGTTAGAT+TGG - chr2_2:1374911-1374930 Msa0229610:CDS 20.0%
!!! ATTTATGAATTTTTACCGAA+TGG - chr2_2:1374969-1374988 Msa0229610:CDS 20.0%
!! ATATGTTAACGACATAATAT+AGG + chr2_2:1373959-1373978 None:intergenic 20.0%
!!! TTCAATTTTTTTAGCTAACT+AGG - chr2_2:1374171-1374190 Msa0229610:intron 20.0%
!!! TTTGCAAGTTTGATTTTTAT+AGG - chr2_2:1374383-1374402 Msa0229610:intron 20.0%
!!! TTAAGAGAATCACATAATTT+TGG - chr2_2:1374674-1374693 Msa0229610:CDS 20.0%
!! ATCTAACAATATTAACATGA+TGG + chr2_2:1374911-1374930 None:intergenic 20.0%
!! TCATGTTAATATTGTTAGAT+TGG - chr2_2:1374911-1374930 Msa0229610:CDS 20.0%
!!! ATTTATGAATTTTTACCGAA+TGG - chr2_2:1374969-1374988 Msa0229610:CDS 20.0%
!!! ACTTTTGATTAGAGATAAGA+TGG - chr2_2:1373622-1373641 Msa0229610:intron 25.0%
!! ACATCAAACGAAGAAAATTT+TGG + chr2_2:1373793-1373812 None:intergenic 25.0%
!! AAAATTTTCTTCGTTTGATG+TGG - chr2_2:1373792-1373811 Msa0229610:intron 25.0%
!! AATTTTGTAAGAGAAAAGGA+GGG + chr2_2:1374058-1374077 None:intergenic 25.0%
!! AGTGAATTTTGTAAGAGAAA+AGG + chr2_2:1374062-1374081 None:intergenic 25.0%
! ATTTGATGAAGATTCATCTT+TGG - chr2_2:1374092-1374111 Msa0229610:intron 25.0%
! ACTATGGTTAGATAATCTAT+TGG + chr2_2:1374262-1374281 None:intergenic 25.0%
! TTATCTAACCATAGTTAACT+TGG - chr2_2:1374267-1374286 Msa0229610:intron 25.0%
!!! AATTTCTACATAAGAGTATC+TGG + chr2_2:1374656-1374675 None:intergenic 25.0%
! AAGAATTCATTGTTGCTATA+AGG - chr2_2:1374746-1374765 Msa0229610:CDS 25.0%
! AAGATACTAAATGTTTCTCA+AGG - chr2_2:1374840-1374859 Msa0229610:CDS 25.0%
! TAAATGTTTCTCAAGGAAAT+GGG - chr2_2:1374847-1374866 Msa0229610:CDS 25.0%
! GTTAATATTGTTAGATTGGT+CGG - chr2_2:1374915-1374934 Msa0229610:CDS 25.0%
!!! ACTTTTGATTAGAGATAAGA+TGG - chr2_2:1373622-1373641 Msa0229610:intron 25.0%
!! ACATCAAACGAAGAAAATTT+TGG + chr2_2:1373793-1373812 None:intergenic 25.0%
!! AAAATTTTCTTCGTTTGATG+TGG - chr2_2:1373792-1373811 Msa0229610:intron 25.0%
!! AATTTTGTAAGAGAAAAGGA+GGG + chr2_2:1374058-1374077 None:intergenic 25.0%
!! AGTGAATTTTGTAAGAGAAA+AGG + chr2_2:1374062-1374081 None:intergenic 25.0%
! ATTTGATGAAGATTCATCTT+TGG - chr2_2:1374092-1374111 Msa0229610:intron 25.0%
! ACTATGGTTAGATAATCTAT+TGG + chr2_2:1374262-1374281 None:intergenic 25.0%
! TTATCTAACCATAGTTAACT+TGG - chr2_2:1374267-1374286 Msa0229610:intron 25.0%
!!! AATTTCTACATAAGAGTATC+TGG + chr2_2:1374656-1374675 None:intergenic 25.0%
! AAGAATTCATTGTTGCTATA+AGG - chr2_2:1374746-1374765 Msa0229610:CDS 25.0%
! AAGATACTAAATGTTTCTCA+AGG - chr2_2:1374840-1374859 Msa0229610:CDS 25.0%
! TAAATGTTTCTCAAGGAAAT+GGG - chr2_2:1374847-1374866 Msa0229610:CDS 25.0%
! GTTAATATTGTTAGATTGGT+CGG - chr2_2:1374915-1374934 Msa0229610:CDS 25.0%
TGATTTCCACATGTTAAATC+TGG + chr2_2:1373317-1373336 None:intergenic 30.0%
GATCAGATAGTTCAATAGTT+TGG + chr2_2:1373490-1373509 None:intergenic 30.0%
TGTTTGTAAAGACAACTTTG+TGG + chr2_2:1373512-1373531 None:intergenic 30.0%
! ATTCTGAAAGATTAAGGTTG+TGG + chr2_2:1373538-1373557 None:intergenic 30.0%
! AACGAGATTCTGAAAGATTA+AGG + chr2_2:1373544-1373563 None:intergenic 30.0%
! AGATAAGATGGACTCATATT+TGG - chr2_2:1373634-1373653 Msa0229610:intron 30.0%
! TAGTCGATTGATTCATAAGA+CGG + chr2_2:1373701-1373720 None:intergenic 30.0%
GTTTCATTAAACAGCAAATC+TGG - chr2_2:1373755-1373774 Msa0229610:intron 30.0%
CTAGGTAAAAATTACCTTTG+TGG + chr2_2:1373910-1373929 None:intergenic 30.0%
!! TGTTAAGAGTGCTTCTAATA+TGG - chr2_2:1373991-1374010 Msa0229610:intron 30.0%
! GAATTTTGTAAGAGAAAAGG+AGG + chr2_2:1374059-1374078 None:intergenic 30.0%
! TCATCTTTGGATTCTTCTTT+TGG - chr2_2:1374105-1374124 Msa0229610:intron 30.0%
!!! TTTTTAGCTAACTAGGAAGA+TGG - chr2_2:1374178-1374197 Msa0229610:intron 30.0%
! ATAAATGCAGGGTCAATTTT+AGG - chr2_2:1374508-1374527 Msa0229610:CDS 30.0%
!! ACATAATTTTGGAGACAAGT+AGG - chr2_2:1374685-1374704 Msa0229610:CDS 30.0%
CTAAATGTTTCTCAAGGAAA+TGG - chr2_2:1374846-1374865 Msa0229610:CDS 30.0%
!! CTTAATGAAGTTGGTACAAT+GGG - chr2_2:1374879-1374898 Msa0229610:CDS 30.0%
TGATTTCCACATGTTAAATC+TGG + chr2_2:1373317-1373336 None:intergenic 30.0%
GATCAGATAGTTCAATAGTT+TGG + chr2_2:1373490-1373509 None:intergenic 30.0%
TGTTTGTAAAGACAACTTTG+TGG + chr2_2:1373512-1373531 None:intergenic 30.0%
! ATTCTGAAAGATTAAGGTTG+TGG + chr2_2:1373538-1373557 None:intergenic 30.0%
! AACGAGATTCTGAAAGATTA+AGG + chr2_2:1373544-1373563 None:intergenic 30.0%
! AGATAAGATGGACTCATATT+TGG - chr2_2:1373634-1373653 Msa0229610:intron 30.0%
! TAGTCGATTGATTCATAAGA+CGG + chr2_2:1373701-1373720 None:intergenic 30.0%
GTTTCATTAAACAGCAAATC+TGG - chr2_2:1373755-1373774 Msa0229610:intron 30.0%
CTAGGTAAAAATTACCTTTG+TGG + chr2_2:1373910-1373929 None:intergenic 30.0%
!! TGTTAAGAGTGCTTCTAATA+TGG - chr2_2:1373991-1374010 Msa0229610:intron 30.0%
! GAATTTTGTAAGAGAAAAGG+AGG + chr2_2:1374059-1374078 None:intergenic 30.0%
! TCATCTTTGGATTCTTCTTT+TGG - chr2_2:1374105-1374124 Msa0229610:intron 30.0%
!!! TTTTTAGCTAACTAGGAAGA+TGG - chr2_2:1374178-1374197 Msa0229610:intron 30.0%
! ATAAATGCAGGGTCAATTTT+AGG - chr2_2:1374508-1374527 Msa0229610:CDS 30.0%
!! ACATAATTTTGGAGACAAGT+AGG - chr2_2:1374685-1374704 Msa0229610:CDS 30.0%
CTAAATGTTTCTCAAGGAAA+TGG - chr2_2:1374846-1374865 Msa0229610:CDS 30.0%
!! CTTAATGAAGTTGGTACAAT+GGG - chr2_2:1374879-1374898 Msa0229610:CDS 30.0%
AGTTGTCCAGATTTAACATG+TGG - chr2_2:1373308-1373327 Msa0229610:CDS 35.0%
!!! GACGGTTTTTGATTTGGAAA+GGG + chr2_2:1373352-1373371 None:intergenic 35.0%
!!! TGACGGTTTTTGATTTGGAA+AGG + chr2_2:1373353-1373372 None:intergenic 35.0%
!! ATGCTTGACGGTTTTTGATT+TGG + chr2_2:1373358-1373377 None:intergenic 35.0%
CGTTTCAACTACTTGAAACA+TGG - chr2_2:1373560-1373579 Msa0229610:intron 35.0%
!! GAGGTTGATGTACTTAAACA+CGG + chr2_2:1373662-1373681 None:intergenic 35.0%
! AGTCGATTGATTCATAAGAC+GGG + chr2_2:1373700-1373719 None:intergenic 35.0%
!! TTTTGGTGCAAAACGAAAGA+GGG + chr2_2:1373727-1373746 None:intergenic 35.0%
!! ATTTTGGTGCAAAACGAAAG+AGG + chr2_2:1373728-1373747 None:intergenic 35.0%
TCAAATACAAACAGCTAGCT+AGG + chr2_2:1373928-1373947 None:intergenic 35.0%
AGTCATGACCAAGTTAACTA+TGG + chr2_2:1374278-1374297 None:intergenic 35.0%
GTAAATATGATAGACTGCAG+CGG + chr2_2:1374557-1374576 None:intergenic 35.0%
!! TCTACATAAGAGTATCTGGT+GGG + chr2_2:1374652-1374671 None:intergenic 35.0%
!! TTCTACATAAGAGTATCTGG+TGG + chr2_2:1374653-1374672 None:intergenic 35.0%
TTGCTATAAGGAGACAAGTT+AGG - chr2_2:1374758-1374777 Msa0229610:CDS 35.0%
CTTCCTTTATAAACAGTTCC+AGG + chr2_2:1374792-1374811 None:intergenic 35.0%
CAAGACTTCCTTAATGAAGT+TGG - chr2_2:1374870-1374889 Msa0229610:CDS 35.0%
CCATTGTACCAACTTCATTA+AGG + chr2_2:1374881-1374900 None:intergenic 35.0%
!! CCTTAATGAAGTTGGTACAA+TGG - chr2_2:1374878-1374897 Msa0229610:CDS 35.0%
AGTTGTCCAGATTTAACATG+TGG - chr2_2:1373308-1373327 Msa0229610:CDS 35.0%
!!! GACGGTTTTTGATTTGGAAA+GGG + chr2_2:1373352-1373371 None:intergenic 35.0%
!!! TGACGGTTTTTGATTTGGAA+AGG + chr2_2:1373353-1373372 None:intergenic 35.0%
!! ATGCTTGACGGTTTTTGATT+TGG + chr2_2:1373358-1373377 None:intergenic 35.0%
CGTTTCAACTACTTGAAACA+TGG - chr2_2:1373560-1373579 Msa0229610:intron 35.0%
!! GAGGTTGATGTACTTAAACA+CGG + chr2_2:1373662-1373681 None:intergenic 35.0%
! AGTCGATTGATTCATAAGAC+GGG + chr2_2:1373700-1373719 None:intergenic 35.0%
!! TTTTGGTGCAAAACGAAAGA+GGG + chr2_2:1373727-1373746 None:intergenic 35.0%
!! ATTTTGGTGCAAAACGAAAG+AGG + chr2_2:1373728-1373747 None:intergenic 35.0%
TCAAATACAAACAGCTAGCT+AGG + chr2_2:1373928-1373947 None:intergenic 35.0%
AGTCATGACCAAGTTAACTA+TGG + chr2_2:1374278-1374297 None:intergenic 35.0%
GTAAATATGATAGACTGCAG+CGG + chr2_2:1374557-1374576 None:intergenic 35.0%
!! TCTACATAAGAGTATCTGGT+GGG + chr2_2:1374652-1374671 None:intergenic 35.0%
!! TTCTACATAAGAGTATCTGG+TGG + chr2_2:1374653-1374672 None:intergenic 35.0%
TTGCTATAAGGAGACAAGTT+AGG - chr2_2:1374758-1374777 Msa0229610:CDS 35.0%
CTTCCTTTATAAACAGTTCC+AGG + chr2_2:1374792-1374811 None:intergenic 35.0%
CAAGACTTCCTTAATGAAGT+TGG - chr2_2:1374870-1374889 Msa0229610:CDS 35.0%
CCATTGTACCAACTTCATTA+AGG + chr2_2:1374881-1374900 None:intergenic 35.0%
!! CCTTAATGAAGTTGGTACAA+TGG - chr2_2:1374878-1374897 Msa0229610:CDS 35.0%
AAATCCTGCATAACCACACA+TGG + chr2_2:1373381-1373400 None:intergenic 40.0%
GATTCGCAATGTGTGCAATT+AGG + chr2_2:1373824-1373843 None:intergenic 40.0%
TGCACACATTGCGAATCAAA+AGG - chr2_2:1373827-1373846 Msa0229610:intron 40.0%
!! CTTGTTGGTAGTATTCTTCC+AGG + chr2_2:1373864-1373883 None:intergenic 40.0%
CTGGAAGAATACTACCAACA+AGG - chr2_2:1373862-1373881 Msa0229610:intron 40.0%
GAAGCAATCTACATCCTTGT+TGG + chr2_2:1373879-1373898 None:intergenic 40.0%
TGCTTCGACAAAAACCACAA+AGG - chr2_2:1373893-1373912 Msa0229610:intron 40.0%
TTTGTAAGAGAAAAGGAGGG+TGG + chr2_2:1374055-1374074 None:intergenic 40.0%
GAGCCTGGAACTGTTTATAA+AGG - chr2_2:1374786-1374805 Msa0229610:CDS 40.0%
GAACTTTGCAGTGAACCATT+CGG + chr2_2:1374987-1375006 None:intergenic 40.0%
AAATCCTGCATAACCACACA+TGG + chr2_2:1373381-1373400 None:intergenic 40.0%
GATTCGCAATGTGTGCAATT+AGG + chr2_2:1373824-1373843 None:intergenic 40.0%
TGCACACATTGCGAATCAAA+AGG - chr2_2:1373827-1373846 Msa0229610:intron 40.0%
!! CTTGTTGGTAGTATTCTTCC+AGG + chr2_2:1373864-1373883 None:intergenic 40.0%
CTGGAAGAATACTACCAACA+AGG - chr2_2:1373862-1373881 Msa0229610:intron 40.0%
GAAGCAATCTACATCCTTGT+TGG + chr2_2:1373879-1373898 None:intergenic 40.0%
TGCTTCGACAAAAACCACAA+AGG - chr2_2:1373893-1373912 Msa0229610:intron 40.0%
TTTGTAAGAGAAAAGGAGGG+TGG + chr2_2:1374055-1374074 None:intergenic 40.0%
GAGCCTGGAACTGTTTATAA+AGG - chr2_2:1374786-1374805 Msa0229610:CDS 40.0%
GAACTTTGCAGTGAACCATT+CGG + chr2_2:1374987-1375006 None:intergenic 40.0%
AACCACACATGGATGCTTGA+CGG + chr2_2:1373370-1373389 None:intergenic 45.0%
AATGATTGAACTCCCTCGCT+CGG - chr2_2:1373430-1373449 Msa0229610:CDS 45.0%
CGGGATAGCGTATATTTGAG+AGG + chr2_2:1373681-1373700 None:intergenic 45.0%
CAAAAGGAAACAGATGTGCC+TGG - chr2_2:1373843-1373862 Msa0229610:intron 45.0%
!! TTTTGGAGACAAGTAGGCGA+AGG - chr2_2:1374691-1374710 Msa0229610:CDS 45.0%
GAGCCTACGGAACTGTTTAT+AGG - chr2_2:1374713-1374732 Msa0229610:CDS 45.0%
GCTCCTATAAACAGTTCCGT+AGG + chr2_2:1374719-1374738 None:intergenic 45.0%
TAAGGAGACAAGTTAGGCGA+AGG - chr2_2:1374764-1374783 Msa0229610:CDS 45.0%
AACCACACATGGATGCTTGA+CGG + chr2_2:1373370-1373389 None:intergenic 45.0%
AATGATTGAACTCCCTCGCT+CGG - chr2_2:1373430-1373449 Msa0229610:CDS 45.0%
CGGGATAGCGTATATTTGAG+AGG + chr2_2:1373681-1373700 None:intergenic 45.0%
CAAAAGGAAACAGATGTGCC+TGG - chr2_2:1373843-1373862 Msa0229610:intron 45.0%
!! TTTTGGAGACAAGTAGGCGA+AGG - chr2_2:1374691-1374710 Msa0229610:CDS 45.0%
GAGCCTACGGAACTGTTTAT+AGG - chr2_2:1374713-1374732 Msa0229610:CDS 45.0%
GCTCCTATAAACAGTTCCGT+AGG + chr2_2:1374719-1374738 None:intergenic 45.0%
TAAGGAGACAAGTTAGGCGA+AGG - chr2_2:1374764-1374783 Msa0229610:CDS 45.0%
AACCGTCAAGCATCCATGTG+TGG - chr2_2:1373365-1373384 Msa0229610:CDS 50.0%
GCATCCATGTGTGGTTATGC+AGG - chr2_2:1373374-1373393 Msa0229610:CDS 50.0%
CATTGAGTTTCACCGAGCGA+GGG + chr2_2:1373445-1373464 None:intergenic 50.0%
ACATTGAGTTTCACCGAGCG+AGG + chr2_2:1373446-1373465 None:intergenic 50.0%
TGGTGCAAAACGAAAGAGGG+AGG + chr2_2:1373724-1373743 None:intergenic 50.0%
TCAACGACGCTAGTCAACAC+AGG - chr2_2:1374410-1374429 Msa0229610:CDS 50.0%
! TTGGTCGGTTTCTGTGCAGA+TGG - chr2_2:1374930-1374949 Msa0229610:CDS 50.0%
AACCGTCAAGCATCCATGTG+TGG - chr2_2:1373365-1373384 Msa0229610:CDS 50.0%
GCATCCATGTGTGGTTATGC+AGG - chr2_2:1373374-1373393 Msa0229610:CDS 50.0%
CATTGAGTTTCACCGAGCGA+GGG + chr2_2:1373445-1373464 None:intergenic 50.0%
ACATTGAGTTTCACCGAGCG+AGG + chr2_2:1373446-1373465 None:intergenic 50.0%
TGGTGCAAAACGAAAGAGGG+AGG + chr2_2:1373724-1373743 None:intergenic 50.0%
TCAACGACGCTAGTCAACAC+AGG - chr2_2:1374410-1374429 Msa0229610:CDS 50.0%
! TTGGTCGGTTTCTGTGCAGA+TGG - chr2_2:1374930-1374949 Msa0229610:CDS 50.0%
CAAGTAGGCGAAGGAGCCTA+CGG - chr2_2:1374700-1374719 Msa0229610:CDS 55.0%
ACAAGTTAGGCGAAGGAGCC+TGG - chr2_2:1374771-1374790 Msa0229610:CDS 55.0%
CAAGTAGGCGAAGGAGCCTA+CGG - chr2_2:1374700-1374719 Msa0229610:CDS 55.0%
ACAAGTTAGGCGAAGGAGCC+TGG - chr2_2:1374771-1374790 Msa0229610:CDS 55.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 1373299 1375010 1373299 ID=Msa0229610;Name=Msa0229610
chr2_2 mRNA 1373299 1375010 1373299 ID=Msa0229610-mRNA-1;Parent=Msa0229610;Name=Msa0229610-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.5|1|1|2|0|272
chr2_2 exon 1374395 1375010 1374395 ID=Msa0229610-mRNA-1:exon:460;Parent=Msa0229610-mRNA-1
chr2_2 exon 1373299 1373501 1373299 ID=Msa0229610-mRNA-1:exon:459;Parent=Msa0229610-mRNA-1
chr2_2 CDS 1374395 1375010 1374395 ID=Msa0229610-mRNA-1:cds;Parent=Msa0229610-mRNA-1
chr2_2 CDS 1373299 1373501 1373299 ID=Msa0229610-mRNA-1:cds;Parent=Msa0229610-mRNA-1
Gene Sequence

>Msa0229610

ATGGTCAATAGTTGTCCAGATTTAACATGTGGAAATCAAGTTATCAAATTCCCTTTCCAAATCAAAAACCGTCAAGCATCCATGTGTGGTTATGCAGGATTTGAGTTATTTTGTTCATCGAATAACGAAACAATGATTGAACTCCCTCGCTCGGTGAAACTCAATGTTAAGAACATTGACTACAGACACCAAACTATTGAACTATCTGATCCACAAAGTTGTCTTTACAAACATATCCACAACCTTAATCTTTCAGAATCTCGTTTCAACTACTTGAAACATGGCTATAATGATTTTGTCGACAATCACTTTTTCAATTGTTCACTTTTGATTAGAGATAAGATGGACTCATATTTGGTTCCGTGTTTAAGTACATCAACCTCTCAAATATACGCTATCCCGTCTTATGAATCAATCGACTACCTCCCTCTTTCGTTTTGCACCAAAATGTTTAATGTTTCATTAAACAGCAAATCTGGTTCTGTTCGAAACCAAAATTTTCTTCGTTTGATGTGGTCTGAGCCTAATTGCACACATTGCGAATCAAAAGGAAACAGATGTGCCTGGAAGAATACTACCAACAAGGATGTAGATTGCTTCGACAAAAACCACAAAGGAAGCATTTCAAAAGAATTCATTGTTGCTGTGAAGATACTAAATGTTTCTCAAGGAAATGGGCAAGACTTCCTTAATGAAGTTGGTACAATGGGTAGAATCCATCATGTTAATATTGTTAGATTGGTCGGTTTCTGTGCAGATGGATTTAAAAGAGCTCTTATTTATGAATTTTTACCGAATGGTTCACTGCAAAGTTCATAA
Protein sequence

>Msa0229610

MVNSCPDLTCGNQVIKFPFQIKNRQASMCGYAGFELFCSSNNETMIELPRSVKLNVKNIDYRHQTIELSDPQSCLYKHIHNLNLSESRFNYLKHGYNDFVDNHFFNCSLLIRDKMDSYLVPCLSTSTSQIYAIPSYESIDYLPLSFCTKMFNVSLNSKSGSVRNQNFLRLMWSEPNCTHCESKGNRCAWKNTTNKDVDCFDKNHKGSISKEFIVAVKILNVSQGNGQDFLNEVGTMGRIHHVNIVRLVGFCADGFKRALIYEFLPNGSLQSS*