Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229960 | AES81012.1 | 100.000 | 439 | 0 | 0 | 1 | 439 | 1 | 439 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229960 | sp|Q8W207|CSN2_ARATH | 86.530 | 438 | 59 | 0 | 1 | 438 | 1 | 438 | 0.0 | 794 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229960 | G7L2Q4 | 100.000 | 439 | 0 | 0 | 1 | 439 | 1 | 439 | 0.0 | 914 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0229960 | Msa1042580 | 0.920142 | 1.860958e-87 | -8.615850e-47 |
| Msa0229960 | Msa1159470 | 0.895037 | 1.401800e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229960 | MtrunA17_Chr7g0254661 | 100.000 | 439 | 0 | 0 | 1 | 439 | 1 | 439 | 0.0 | 914 |
| Msa0229960 | MtrunA17_Chr3g0139291 | 24.403 | 377 | 265 | 8 | 33 | 400 | 14 | 379 | 5.94e-19 | 88.6 |
| Msa0229960 | MtrunA17_Chr1g0147501 | 23.077 | 377 | 270 | 7 | 33 | 400 | 13 | 378 | 3.90e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229960 | AT2G26990.1 | 86.530 | 438 | 59 | 0 | 1 | 438 | 1 | 438 | 0.0 | 794 |
| Msa0229960 | AT1G29150.2 | 24.847 | 326 | 226 | 7 | 84 | 400 | 61 | 376 | 3.96e-18 | 86.7 |
| Msa0229960 | AT1G29150.1 | 24.847 | 326 | 226 | 7 | 84 | 400 | 61 | 376 | 3.96e-18 | 86.7 |
Find 122 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAATGACCCTGAAATTT+TGG | 0.127892 | 2_2:+1736889 | Msa0229960:CDS |
| GCTACTCGTGTCGCTTATTT+TGG | 0.140084 | 2_2:+1737661 | Msa0229960:CDS |
| GATCCAGAAGGTGCACTTTC+TGG | 0.147949 | 2_2:+1733047 | Msa0229960:CDS |
| TCAATGTAATTTCTGATAAA+TGG | 0.196401 | 2_2:-1737118 | None:intergenic |
| ACTTGATAGTAAGTGCTTTC+TGG | 0.201814 | 2_2:-1736106 | None:intergenic |
| TTTGTCATAGCCAAAATTTC+AGG | 0.251146 | 2_2:-1736899 | None:intergenic |
| CAATATTTCATTTCGTTGAT+AGG | 0.253136 | 2_2:-1736933 | None:intergenic |
| TTCTTTGACATTGGGGAATA+TGG | 0.262917 | 2_2:+1733841 | Msa0229960:CDS |
| GGTTCGGCTAGCCAGAATTT+TGG | 0.278850 | 2_2:+1733636 | Msa0229960:CDS |
| TGCTGTACCTTAGATATAAA+TGG | 0.280335 | 2_2:-1737211 | None:intergenic |
| AGTATACAGCTGTGGATAAA+TGG | 0.289112 | 2_2:+1737849 | Msa0229960:CDS |
| TGTGAAATCGATTGAGTTAG+AGG | 0.304943 | 2_2:-1731234 | None:intergenic |
| TAAGAAAGGAACTCAACTTT+TGG | 0.311538 | 2_2:+1734065 | Msa0229960:CDS |
| AAAGTTGAGTTCCTTTCTTA+TGG | 0.315236 | 2_2:-1734062 | None:intergenic |
| CCTGCAGAAGGCCAAAATTC+TGG | 0.317661 | 2_2:-1733647 | None:intergenic |
| TGAGTTAGAGGATCCGAGTT+AGG | 0.322793 | 2_2:-1731222 | None:intergenic |
| GGGATCCTGATCCTTGTATA+TGG | 0.333383 | 2_2:-1737190 | None:intergenic |
| CAGGATCCCATTTATATCTA+AGG | 0.333424 | 2_2:+1737204 | Msa0229960:CDS |
| AATTCCCCATCCAAGGATAA+TGG | 0.342632 | 2_2:+1736133 | Msa0229960:CDS |
| ATTGTAGGCTGTATGGAGTT+AGG | 0.348287 | 2_2:+1737994 | Msa0229960:three_prime_UTR |
| TTATTCTGTAGATGCTGATA+TGG | 0.357413 | 2_2:+1732523 | Msa0229960:intron |
| TGTTCTTGCAAACATGTTGA+TGG | 0.362435 | 2_2:+1736692 | Msa0229960:CDS |
| CTTGTGAATTAATAGATTGT+AGG | 0.364543 | 2_2:+1737979 | Msa0229960:three_prime_UTR |
| ATTCCCCATCCAAGGATAAT+GGG | 0.364812 | 2_2:+1736134 | Msa0229960:CDS |
| ACAAGACAAAACTGCAAGTC+AGG | 0.370547 | 2_2:-1737961 | None:intergenic |
| CATTCTCTTCACTCCCTCAC+CGG | 0.374770 | 2_2:+1731160 | Msa0229960:five_prime_UTR |
| TTGTAGGCTGTATGGAGTTA+GGG | 0.383250 | 2_2:+1737995 | Msa0229960:three_prime_UTR |
| AAACCAGAAAGTGCACCTTC+TGG | 0.388675 | 2_2:-1733050 | None:intergenic |
| AATTCATACACCAGACAGTA+TGG | 0.390682 | 2_2:-1737924 | None:intergenic |
| CTATCAACGAAATGAAATAT+TGG | 0.391350 | 2_2:+1736934 | Msa0229960:CDS |
| CAAGAGCTCTCAGAGTTGTT+TGG | 0.401028 | 2_2:-1733677 | None:intergenic |
| TCTATTCTGTCAGATCCTTA+AGG | 0.406357 | 2_2:+1733999 | Msa0229960:intron |
| TCTGAAGTAAATCCATTTGA+TGG | 0.407498 | 2_2:+1736717 | Msa0229960:CDS |
| TTTAAGAATTATGATGAAGC+TGG | 0.408606 | 2_2:+1736236 | Msa0229960:CDS |
| TGGATTATCCCCATTATCCT+TGG | 0.420400 | 2_2:-1736143 | None:intergenic |
| AAAGTGCATAAACAGCATTA+TGG | 0.430939 | 2_2:+1733602 | Msa0229960:CDS |
| TTAACCAACTCTGTTGTTGA+TGG | 0.434196 | 2_2:-1737900 | None:intergenic |
| TTAATAGATTGTAGGCTGTA+TGG | 0.435720 | 2_2:+1737987 | Msa0229960:three_prime_UTR |
| ACGGTGATGTGTTTGCGCTT+AGG | 0.447104 | 2_2:-1731109 | None:intergenic |
| TTTCACACAATCATGGCTTC+CGG | 0.449244 | 2_2:+1731250 | Msa0229960:exon |
| TGATCAAGTGAACCGGCTCT+TGG | 0.452232 | 2_2:+1737706 | Msa0229960:CDS |
| ATAACATTGTTCAGGTCAAA+AGG | 0.455143 | 2_2:+1737818 | Msa0229960:intron |
| CTGTAGCTGCGTCAGCCCAC+TGG | 0.464009 | 2_2:-1736199 | None:intergenic |
| GATGCTGATATGGAGGACTA+TGG | 0.466037 | 2_2:+1732533 | Msa0229960:intron |
| GCTGTACCTTAGATATAAAT+GGG | 0.469818 | 2_2:-1737210 | None:intergenic |
| AGCATTATGGACTATGTCTC+TGG | 0.472310 | 2_2:+1733615 | Msa0229960:CDS |
| AAGAGATGATGGAAGCCTAC+AGG | 0.473002 | 2_2:+1733532 | Msa0229960:CDS |
| AAGATCTGTGAAGTTCCTTA+AGG | 0.474071 | 2_2:-1734014 | None:intergenic |
| CAATCGATTTCACACAATCA+TGG | 0.478997 | 2_2:+1731243 | Msa0229960:exon |
| ATTCTCTTCACTCCCTCACC+GGG | 0.485352 | 2_2:+1731161 | Msa0229960:five_prime_UTR |
| TTAAGAATTATGATGAAGCT+GGG | 0.488805 | 2_2:+1736237 | Msa0229960:CDS |
| GACACATTGATCAAGTGAAC+CGG | 0.491543 | 2_2:+1737699 | Msa0229960:CDS |
| AATCAATATTACAATTCAAA+AGG | 0.491929 | 2_2:+1732605 | Msa0229960:CDS |
| GTCAAGCTTTATTATAGACT+TGG | 0.493826 | 2_2:+1733501 | Msa0229960:CDS |
| GAGTTAGAGGATCCGAGTTA+GGG | 0.494286 | 2_2:-1731221 | None:intergenic |
| TGCACATGGCAGAGCGCCAG+TGG | 0.497198 | 2_2:+1736183 | Msa0229960:CDS |
| TGGAAGGTATAAAGAGATGA+TGG | 0.498197 | 2_2:+1733521 | Msa0229960:CDS |
| TTGTCATAGCCAAAATTTCA+GGG | 0.501810 | 2_2:-1736898 | None:intergenic |
| AGTAAATCCATTTGATGGGC+AGG | 0.506781 | 2_2:+1736722 | Msa0229960:CDS |
| AGCTGCTCAACATCATGCTC+AGG | 0.507745 | 2_2:-1737641 | None:intergenic |
| CGGTGAGGGAGTGAAGAGAA+TGG | 0.508161 | 2_2:-1731159 | None:intergenic |
| TCAAACCATATACAAGGATC+AGG | 0.511702 | 2_2:+1737185 | Msa0229960:CDS |
| GGCTCTTGGAACGCTCTGAT+AGG | 0.517303 | 2_2:+1737720 | Msa0229960:CDS |
| TTAGCCTCCTGCCCATCAAA+TGG | 0.517684 | 2_2:-1736729 | None:intergenic |
| TATGGACTATGTCTCTGGTT+CGG | 0.519186 | 2_2:+1733620 | Msa0229960:CDS |
| GGAATATGGTCGGATGAGTA+AGG | 0.522377 | 2_2:+1733855 | Msa0229960:CDS |
| TTATCCCCATTATCCTTGGA+TGG | 0.523746 | 2_2:-1736139 | None:intergenic |
| TATCCCCATTATCCTTGGAT+GGG | 0.533048 | 2_2:-1736138 | None:intergenic |
| GGTGAGGGAGTGAAGAGAAT+GGG | 0.536821 | 2_2:-1731158 | None:intergenic |
| GCGTTGCTTACTTCAAGCAT+TGG | 0.536936 | 2_2:-1736274 | None:intergenic |
| GTTGGTTAAACCATACTGTC+TGG | 0.537218 | 2_2:+1737914 | Msa0229960:exon |
| ATCCCCATTATCCTTGGATG+GGG | 0.541050 | 2_2:-1736137 | None:intergenic |
| TTGACATTGGGGAATATGGT+CGG | 0.541126 | 2_2:+1733845 | Msa0229960:CDS |
| TGACGAGGAACAAGAGGAGC+AGG | 0.542929 | 2_2:+1732568 | Msa0229960:CDS |
| CTGAAGTAAATCCATTTGAT+GGG | 0.551373 | 2_2:+1736718 | Msa0229960:CDS |
| TATAGATTGGAGCAGTGAGT+GGG | 0.554067 | 2_2:-1731195 | None:intergenic |
| CAATCTATAAAACCCTAACT+CGG | 0.555489 | 2_2:+1731209 | Msa0229960:five_prime_UTR |
| GTAAATCAAGAATCACAAGT+TGG | 0.557191 | 2_2:-1738052 | None:intergenic |
| GGGAGTGAAGAGAATGGGAA+AGG | 0.558322 | 2_2:-1731153 | None:intergenic |
| TATCAGAGCGTTCCAAGAGC+CGG | 0.558355 | 2_2:-1737718 | None:intergenic |
| TTTGGTAGAATTCCTGCAGA+AGG | 0.558473 | 2_2:-1733659 | None:intergenic |
| CAAACCATCAACAACAGAGT+TGG | 0.558758 | 2_2:+1737896 | Msa0229960:CDS |
| TTGTTCCATTCGCACTACCT+CGG | 0.563644 | 2_2:-1733075 | None:intergenic |
| TTATAGATTGGAGCAGTGAG+TGG | 0.563997 | 2_2:-1731196 | None:intergenic |
| AACTCTGAGAGCTCTTGAAG+AGG | 0.565608 | 2_2:+1733683 | Msa0229960:CDS |
| AACTCATCAAACCATATACA+AGG | 0.571363 | 2_2:+1737179 | Msa0229960:CDS |
| AGCTTTATTATAGACTTGGA+AGG | 0.584874 | 2_2:+1733505 | Msa0229960:CDS |
| GAGTAACAGAAGAACCATCA+TGG | 0.585813 | 2_2:+1737090 | Msa0229960:intron |
| TGGGGATAATCCATGAATGT+GGG | 0.586852 | 2_2:+1736153 | Msa0229960:CDS |
| TTCTGTAGATGCTGATATGG+AGG | 0.588074 | 2_2:+1732526 | Msa0229960:intron |
| TCACAAGTTGGATTTCACTT+CGG | 0.588342 | 2_2:-1738040 | None:intergenic |
| GTAGGCTGTATGGAGTTAGG+GGG | 0.590083 | 2_2:+1737997 | Msa0229960:three_prime_UTR |
| AGATCTTGTCAACGTGAGGA+TGG | 0.590088 | 2_2:+1734030 | Msa0229960:CDS |
| ATGGGGATAATCCATGAATG+TGG | 0.590124 | 2_2:+1736152 | Msa0229960:CDS |
| GATAAATGGATCATCCATGA+TGG | 0.594343 | 2_2:-1737104 | None:intergenic |
| TGGAACAAGACAAGGCAGAA+TGG | 0.594639 | 2_2:+1733090 | Msa0229960:CDS |
| GGCACAGATGACCATAAGAA+AGG | 0.595066 | 2_2:+1734051 | Msa0229960:CDS |
| ATTTATCAGAAATTACATTG+AGG | 0.595350 | 2_2:+1737120 | Msa0229960:CDS |
| GTATGTCAACATCTCCCTGT+AGG | 0.595935 | 2_2:-1733547 | None:intergenic |
| GGAATTTGAGAAAATCCTGA+AGG | 0.598423 | 2_2:+1736955 | Msa0229960:CDS |
| AGAGATGATGGAAGCCTACA+GGG | 0.600048 | 2_2:+1733533 | Msa0229960:CDS |
| TCAACATGTTTGCAAGAACA+AGG | 0.601457 | 2_2:-1736689 | None:intergenic |
| GAGAATGGGAAAGGAAATAG+CGG | 0.601583 | 2_2:-1731144 | None:intergenic |
| TGTAGGCTGTATGGAGTTAG+GGG | 0.603741 | 2_2:+1737996 | Msa0229960:three_prime_UTR |
| GCACATGGCAGAGCGCCAGT+GGG | 0.609748 | 2_2:+1736184 | Msa0229960:CDS |
| CAAGACAAAACTGCAAGTCA+GGG | 0.610796 | 2_2:-1737960 | None:intergenic |
| AGTCAGCAATTCCCCATCCA+AGG | 0.617382 | 2_2:+1736126 | Msa0229960:CDS |
| GTACTCTGACGAGGAACAAG+AGG | 0.622630 | 2_2:+1732562 | Msa0229960:CDS |
| ATGATGAAGCTGGGAATCAG+AGG | 0.623287 | 2_2:+1736246 | Msa0229960:CDS |
| AATGGGAAAGGAAATAGCGG+AGG | 0.625679 | 2_2:-1731141 | None:intergenic |
| GGGGATAATCCATGAATGTG+GGG | 0.625903 | 2_2:+1736154 | Msa0229960:CDS |
| TTGGTTGAAACTGATCCAGA+AGG | 0.628433 | 2_2:+1733035 | Msa0229960:CDS |
| GCTAAAGAATATCAGAACAC+AGG | 0.632877 | 2_2:+1737147 | Msa0229960:CDS |
| TTCCCCATCCAAGGATAATG+GGG | 0.633586 | 2_2:+1736135 | Msa0229960:CDS |
| GGGATAATCCATGAATGTGG+GGG | 0.639797 | 2_2:+1736155 | Msa0229960:CDS |
| AATGAAGAAGTATACAGCTG+TGG | 0.646266 | 2_2:+1737841 | Msa0229960:CDS |
| AAATCCATTTGATGGGCAGG+AGG | 0.647747 | 2_2:+1736725 | Msa0229960:CDS |
| AGTGCGAATGGAACAAGACA+AGG | 0.649447 | 2_2:+1733082 | Msa0229960:CDS |
| TCACAGATCTTGTCAACGTG+AGG | 0.658259 | 2_2:+1734026 | Msa0229960:CDS |
| ATAGCGGAGGAATTAAGTAA+CGG | 0.695108 | 2_2:-1731128 | None:intergenic |
| GGATAATCCATGAATGTGGG+GGG | 0.699496 | 2_2:+1736156 | Msa0229960:CDS |
| TGGATTTGAGTACTCTGACG+AGG | 0.708369 | 2_2:+1732553 | Msa0229960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAGAAATTTTTTTTTTTC+AGG | - | chr2_2:1731993-1732012 | None:intergenic | 10.0% |
| !!! | TATTTTGACTAAATAATTAA+TGG | + | chr2_2:1734982-1735001 | Msa0229960:intron | 10.0% |
| !!! | ATTTTGACTAAATAATTAAT+GGG | + | chr2_2:1734983-1735002 | Msa0229960:intron | 10.0% |
| !! | ATACAGTAAAATAATAAATA+TGG | - | chr2_2:1735900-1735919 | None:intergenic | 10.0% |
| !! | TTGATATAATTGAAATTATA+AGG | - | chr2_2:1736072-1736091 | None:intergenic | 10.0% |
| !!! | TCAATTTTTAATTTCTATAA+TGG | + | chr2_2:1736329-1736348 | Msa0229960:intron | 10.0% |
| !! | AATATTTGTATATTGATATT+GGG | + | chr2_2:1737053-1737072 | Msa0229960:intron | 10.0% |
| !!! | TAGATATTTTTTGATAAAAA+AGG | - | chr2_2:1737329-1737348 | None:intergenic | 10.0% |
| !! | TAAAAATAATAACTAAAAGC+AGG | - | chr2_2:1732233-1732252 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTTTATTTTTGTG+AGG | + | chr2_2:1732246-1732265 | Msa0229960:intron | 15.0% |
| !! | AATCAATATTACAATTCAAA+AGG | + | chr2_2:1732605-1732624 | Msa0229960:CDS | 15.0% |
| !! | TTACATTTATGAATTGAATT+TGG | + | chr2_2:1732659-1732678 | Msa0229960:intron | 15.0% |
| !!! | AATTGAATTTGGTTTATTTT+TGG | + | chr2_2:1732670-1732689 | Msa0229960:intron | 15.0% |
| !!! | ATTGAATTTGGTTTATTTTT+GGG | + | chr2_2:1732671-1732690 | Msa0229960:intron | 15.0% |
| !!! | CATTTTAATTTATTTTGACA+AGG | - | chr2_2:1732873-1732892 | None:intergenic | 15.0% |
| !!! | ATGTGTTCTTTTTTTTTTTT+TGG | + | chr2_2:1733880-1733899 | Msa0229960:intron | 15.0% |
| !!! | TGTGTTCTTTTTTTTTTTTT+GGG | + | chr2_2:1733881-1733900 | Msa0229960:intron | 15.0% |
| !!! | ACACATTTTTTTTGTATATA+TGG | + | chr2_2:1734407-1734426 | Msa0229960:intron | 15.0% |
| !!! | TATATGTTAATTTGTGAATT+TGG | - | chr2_2:1734553-1734572 | None:intergenic | 15.0% |
| !! | GTCAAAATAATAGTATATAT+TGG | + | chr2_2:1735725-1735744 | Msa0229960:intron | 15.0% |
| !!! | ATTGAAATTATAAGGATTTT+AGG | - | chr2_2:1736064-1736083 | None:intergenic | 15.0% |
| !! | AAAATAAGATAAATATGTTG+AGG | - | chr2_2:1737025-1737044 | None:intergenic | 15.0% |
| !! | CAATATCAATATACAAATAT+TGG | - | chr2_2:1737054-1737073 | None:intergenic | 15.0% |
| !! | CAATATTTGTATATTGATAT+TGG | + | chr2_2:1737052-1737071 | Msa0229960:intron | 15.0% |
| !!! | TTTTTGATAAAAAAGGTATT+TGG | - | chr2_2:1737322-1737341 | None:intergenic | 15.0% |
| !! | AAATATTACTACTAAAAGAA+AGG | - | chr2_2:1737549-1737568 | None:intergenic | 15.0% |
| !!! | AACTGAATAGTTTAGATTTT+AGG | + | chr2_2:1731457-1731476 | Msa0229960:intron | 20.0% |
| !! | TGCTATAAAAATACTCTATT+CGG | + | chr2_2:1731873-1731892 | Msa0229960:intron | 20.0% |
| !! | ACATCAGATATTCAATAAAT+CGG | - | chr2_2:1731927-1731946 | None:intergenic | 20.0% |
| !! | TATTGAATATCTGATGTATT+TGG | + | chr2_2:1731930-1731949 | Msa0229960:intron | 20.0% |
| !!! | TAATTATCTGATTGATAATG+TGG | - | chr2_2:1731957-1731976 | None:intergenic | 20.0% |
| !! | ATTCAATTCATAAATGTAAG+CGG | - | chr2_2:1732658-1732677 | None:intergenic | 20.0% |
| !! | CAAATAACAAAATACAATGA+TGG | - | chr2_2:1732768-1732787 | None:intergenic | 20.0% |
| !! | AAACATAAAACCACAATAAT+AGG | - | chr2_2:1733759-1733778 | None:intergenic | 20.0% |
| !!! | TATCTGCTTTTATTATCTAT+TGG | + | chr2_2:1734433-1734452 | Msa0229960:intron | 20.0% |
| !! | TGATAAAACAACGTATTAAA+AGG | + | chr2_2:1734822-1734841 | Msa0229960:intron | 20.0% |
| !! | TGTACCAAAAAAAAAAAAAG+AGG | + | chr2_2:1735050-1735069 | Msa0229960:intron | 20.0% |
| !! | AATCAGTAAAATAATACAAG+AGG | - | chr2_2:1735487-1735506 | None:intergenic | 20.0% |
| !!! | TCTTGTATTATTTTACTGAT+TGG | + | chr2_2:1735486-1735505 | Msa0229960:intron | 20.0% |
| !! | AGGAAATAAATCATCAAATA+TGG | - | chr2_2:1735649-1735668 | None:intergenic | 20.0% |
| !! | AGTCTAGTAATTATATCAAA+GGG | + | chr2_2:1735950-1735969 | Msa0229960:intron | 20.0% |
| !! | ACAAAAAAAACAAGATAAAG+AGG | - | chr2_2:1736764-1736783 | None:intergenic | 20.0% |
| !! | TCAATGTAATTTCTGATAAA+TGG | - | chr2_2:1737121-1737140 | None:intergenic | 20.0% |
| !! | ATTTATCAGAAATTACATTG+AGG | + | chr2_2:1737120-1737139 | Msa0229960:CDS | 20.0% |
| !!! | TAAATTGTGTATTTAAAACC+TGG | + | chr2_2:1737777-1737796 | Msa0229960:intron | 20.0% |
| !! | TTTAACGTTAATAAAATACC+AGG | - | chr2_2:1737798-1737817 | None:intergenic | 20.0% |
| !!! | TTAGGTTTTTTACTTTGTAG+TGG | + | chr2_2:1731475-1731494 | Msa0229960:intron | 25.0% |
| !! | AAATTTCTTATATTTGGGAC+CGG | + | chr2_2:1732002-1732021 | Msa0229960:intron | 25.0% |
| !!! | AGAAAGCATCTAATTGAATA+GGG | - | chr2_2:1732091-1732110 | None:intergenic | 25.0% |
| !!! | TAGAAAGCATCTAATTGAAT+AGG | - | chr2_2:1732092-1732111 | None:intergenic | 25.0% |
| ! | AAATCAACTAATCACGTTTA+TGG | - | chr2_2:1732826-1732845 | None:intergenic | 25.0% |
| !!! | TGTTTTGCAATTTTGAGATT+TGG | + | chr2_2:1732923-1732942 | Msa0229960:intron | 25.0% |
| ! | ACTTCATTATGGAACATATA+TGG | + | chr2_2:1733133-1733152 | Msa0229960:intron | 25.0% |
| ! | GGTAACAAGTATAATAAACA+TGG | - | chr2_2:1733454-1733473 | None:intergenic | 25.0% |
| !! | TGTTTATTATACTTGTTACC+AGG | + | chr2_2:1733454-1733473 | Msa0229960:intron | 25.0% |
| !! | GTTTATTATACTTGTTACCA+GGG | + | chr2_2:1733455-1733474 | Msa0229960:intron | 25.0% |
| !! | TTTATTATACTTGTTACCAG+GGG | + | chr2_2:1733456-1733475 | Msa0229960:intron | 25.0% |
| !! | TGTAAGATTTTCTTTGACAT+TGG | + | chr2_2:1733832-1733851 | Msa0229960:CDS | 25.0% |
| !! | GTAAGATTTTCTTTGACATT+GGG | + | chr2_2:1733833-1733852 | Msa0229960:CDS | 25.0% |
| !! | TAAGATTTTCTTTGACATTG+GGG | + | chr2_2:1733834-1733853 | Msa0229960:CDS | 25.0% |
| ! | ATCTGTTTGTATCTATCTAT+TGG | + | chr2_2:1733943-1733962 | Msa0229960:intron | 25.0% |
| !! | ACAAATAAGTTTTGCATGTA+TGG | + | chr2_2:1734370-1734389 | Msa0229960:intron | 25.0% |
| !! | CAAATAAGTTTTGCATGTAT+GGG | + | chr2_2:1734371-1734390 | Msa0229960:intron | 25.0% |
| ! | TTTATTATCTATTGGAAGCA+AGG | + | chr2_2:1734441-1734460 | Msa0229960:intron | 25.0% |
| !!! | TGTTAATTTGTGAATTTGGT+AGG | - | chr2_2:1734549-1734568 | None:intergenic | 25.0% |
| ! | TGATAAGTTTCCTCAAATTA+TGG | + | chr2_2:1734886-1734905 | Msa0229960:intron | 25.0% |
| ! | GATAAGTTTCCTCAAATTAT+GGG | + | chr2_2:1734887-1734906 | Msa0229960:intron | 25.0% |
| !!! | TGTGCCTCTTTTTTTTTTTT+TGG | - | chr2_2:1735057-1735076 | None:intergenic | 25.0% |
| !! | ATTTTCATGTGAAAACAAGA+TGG | + | chr2_2:1735432-1735451 | Msa0229960:intron | 25.0% |
| ! | AGAAATTCCAACAAATATCA+TGG | - | chr2_2:1735562-1735581 | None:intergenic | 25.0% |
| ! | TCTTGAATCTTAAGTACTAA+AGG | - | chr2_2:1735705-1735724 | None:intergenic | 25.0% |
| ! | GAGTCTAGTAATTATATCAA+AGG | + | chr2_2:1735949-1735968 | Msa0229960:intron | 25.0% |
| ! | GTCTAGTAATTATATCAAAG+GGG | + | chr2_2:1735951-1735970 | Msa0229960:intron | 25.0% |
| ! | TTTAGGTATGAATTGAGAAA+GGG | - | chr2_2:1736047-1736066 | None:intergenic | 25.0% |
| !!! | TTTTAGGTATGAATTGAGAA+AGG | - | chr2_2:1736048-1736067 | None:intergenic | 25.0% |
| ! | TTTAAGAATTATGATGAAGC+TGG | + | chr2_2:1736236-1736255 | Msa0229960:CDS | 25.0% |
| ! | TTAAGAATTATGATGAAGCT+GGG | + | chr2_2:1736237-1736256 | Msa0229960:CDS | 25.0% |
| ! | ATTAACATAGTTAATTGCAG+AGG | - | chr2_2:1736359-1736378 | None:intergenic | 25.0% |
| ! | CAACAAATTAGTAGCAATTA+TGG | - | chr2_2:1736655-1736674 | None:intergenic | 25.0% |
| !! | CATAATTGCTACTAATTTGT+TGG | + | chr2_2:1736653-1736672 | Msa0229960:intron | 25.0% |
| ! | AGGTAAAAACAAGAAAATGA+GGG | - | chr2_2:1736847-1736866 | None:intergenic | 25.0% |
| ! | TAGGTAAAAACAAGAAAATG+AGG | - | chr2_2:1736848-1736867 | None:intergenic | 25.0% |
| ! | TCTGCAATAAATAATGTGTT+AGG | - | chr2_2:1736867-1736886 | None:intergenic | 25.0% |
| ! | CAATATTTCATTTCGTTGAT+AGG | - | chr2_2:1736936-1736955 | None:intergenic | 25.0% |
| ! | CTATCAACGAAATGAAATAT+TGG | + | chr2_2:1736934-1736953 | Msa0229960:CDS | 25.0% |
| ! | GAATTAGTGGAATAAAGAAA+TGG | + | chr2_2:1737286-1737305 | Msa0229960:intron | 25.0% |
| !!! | ATAAGCCAAACATTATTTTG+TGG | + | chr2_2:1737435-1737454 | Msa0229960:intron | 25.0% |
| !! | ATTTTGGATAACAGAATTCA+AGG | + | chr2_2:1737677-1737696 | Msa0229960:CDS | 25.0% |
| ! | ACGTTAAAATAACATTGTTC+AGG | + | chr2_2:1737810-1737829 | Msa0229960:intron | 25.0% |
| ! | CTTGTGAATTAATAGATTGT+AGG | + | chr2_2:1737979-1737998 | Msa0229960:three_prime_UTR | 25.0% |
| CAATCTATAAAACCCTAACT+CGG | + | chr2_2:1731209-1731228 | Msa0229960:five_prime_UTR | 30.0% | |
| ! | TGAAATAAGCGATTTAGCTT+CGG | - | chr2_2:1731344-1731363 | None:intergenic | 30.0% |
| !! | TTGCATAAGTTTTGTCAGTT+TGG | + | chr2_2:1731790-1731809 | Msa0229960:intron | 30.0% |
| ATTGTTTGTGTATAAGCTGT+CGG | - | chr2_2:1731834-1731853 | None:intergenic | 30.0% | |
| TATCTAAAAGTTACTCCTTC+CGG | - | chr2_2:1732024-1732043 | None:intergenic | 30.0% | |
| TGTTTCTTTGATATATCCAC+AGG | + | chr2_2:1732294-1732313 | Msa0229960:intron | 30.0% | |
| GTTTCTTTGATATATCCACA+GGG | + | chr2_2:1732295-1732314 | Msa0229960:intron | 30.0% | |
| AAATGATAACATATGCCCTT+AGG | + | chr2_2:1732318-1732337 | Msa0229960:intron | 30.0% | |
| TGTAACCACTTAATGTGTTT+AGG | - | chr2_2:1732499-1732518 | None:intergenic | 30.0% | |
| TTATTCTGTAGATGCTGATA+TGG | + | chr2_2:1732523-1732542 | Msa0229960:intron | 30.0% | |
| ! | ACAGACACAATCTAATTTGT+AGG | - | chr2_2:1732717-1732736 | None:intergenic | 30.0% |
| !! | TGTTGCTTACTAACTAGTTT+TGG | + | chr2_2:1732734-1732753 | Msa0229960:intron | 30.0% |
| ! | TTTAAGATAAGCATCATGAC+TGG | + | chr2_2:1732798-1732817 | Msa0229960:intron | 30.0% |
| !!! | GAGATTTGGTTTTTAGTTTG+TGG | + | chr2_2:1732937-1732956 | Msa0229960:intron | 30.0% |
| ! | TTTTCTCCTGTACTTCATTA+TGG | + | chr2_2:1733122-1733141 | Msa0229960:intron | 30.0% |
| TATGTTCCATAATGAAGTAC+AGG | - | chr2_2:1733131-1733150 | None:intergenic | 30.0% | |
| TATATGGATGTTGAAGTTAG+TGG | + | chr2_2:1733149-1733168 | Msa0229960:intron | 30.0% | |
| ACGCAATAAATAACAGATCA+TGG | - | chr2_2:1733229-1733248 | None:intergenic | 30.0% | |
| ! | GAATGTTTCTCTTTTCGATT+TGG | + | chr2_2:1733277-1733296 | Msa0229960:intron | 30.0% |
| AGAATATGAGTGAGAAACAA+GGG | - | chr2_2:1733359-1733378 | None:intergenic | 30.0% | |
| AAGAATATGAGTGAGAAACA+AGG | - | chr2_2:1733360-1733379 | None:intergenic | 30.0% | |
| AAGATTACAAGACATTACCA+TGG | - | chr2_2:1733397-1733416 | None:intergenic | 30.0% | |
| !! | GTCAAGCTTTATTATAGACT+TGG | + | chr2_2:1733501-1733520 | Msa0229960:CDS | 30.0% |
| !! | AGCTTTATTATAGACTTGGA+AGG | + | chr2_2:1733505-1733524 | Msa0229960:CDS | 30.0% |
| ! | TGCACTTTTCACTATAGTTA+CGG | - | chr2_2:1733590-1733609 | None:intergenic | 30.0% |
| AAAGTGCATAAACAGCATTA+TGG | + | chr2_2:1733602-1733621 | Msa0229960:CDS | 30.0% | |
| AACCACAATAATAGGAGAAA+CGG | - | chr2_2:1733751-1733770 | None:intergenic | 30.0% | |
| AAAGTTGAGTTCCTTTCTTA+TGG | - | chr2_2:1734065-1734084 | None:intergenic | 30.0% | |
| ! | TAAGAAAGGAACTCAACTTT+TGG | + | chr2_2:1734065-1734084 | Msa0229960:CDS | 30.0% |
| !!! | CTTGAGTTTTTTGTTGTTCT+TGG | - | chr2_2:1734127-1734146 | None:intergenic | 30.0% |
| CAAGAACAACAAAAAACTCA+AGG | + | chr2_2:1734125-1734144 | Msa0229960:CDS | 30.0% | |
| AATATGAAACACCGTGTAAA+CGG | - | chr2_2:1734237-1734256 | None:intergenic | 30.0% | |
| ATCAATACTCCCATAATTTG+AGG | - | chr2_2:1734899-1734918 | None:intergenic | 30.0% | |
| TTTCCACAATTATTGCTTAG+TGG | + | chr2_2:1734922-1734941 | Msa0229960:intron | 30.0% | |
| TTCCACAATTATTGCTTAGT+GGG | + | chr2_2:1734923-1734942 | Msa0229960:intron | 30.0% | |
| !! | TTATTGCTTAGTGGGTTTAT+TGG | + | chr2_2:1734931-1734950 | Msa0229960:intron | 30.0% |
| !! | TATTGCTTAGTGGGTTTATT+GGG | + | chr2_2:1734932-1734951 | Msa0229960:intron | 30.0% |
| TTAATGAAACGAATCGTTTC+AGG | + | chr2_2:1735007-1735026 | Msa0229960:intron | 30.0% | |
| TAATGAAACGAATCGTTTCA+GGG | + | chr2_2:1735008-1735027 | Msa0229960:intron | 30.0% | |
| ! | GATTTTTCATCTTCCAATCA+TGG | - | chr2_2:1735299-1735318 | None:intergenic | 30.0% |
| ! | TTGGTTCATCTTCTTTGAAA+AGG | + | chr2_2:1735353-1735372 | Msa0229960:intron | 30.0% |
| ! | TTCATCTTCTTTGAAAAGGA+GGG | + | chr2_2:1735357-1735376 | Msa0229960:intron | 30.0% |
| TCAATGTCCATGATATTTGT+TGG | + | chr2_2:1735552-1735571 | Msa0229960:intron | 30.0% | |
| ! | TAGAGCATTAGATGATTACT+TGG | + | chr2_2:1735616-1735635 | Msa0229960:intron | 30.0% |
| !! | TTTGCTCTTTTAAGCTTTAG+AGG | + | chr2_2:1735782-1735801 | Msa0229960:intron | 30.0% |
| GACAATTCACGTTTAATCAT+AGG | - | chr2_2:1736384-1736403 | None:intergenic | 30.0% | |
| !! | AATCTTTTAACTGCATACTG+TGG | + | chr2_2:1736440-1736459 | Msa0229960:intron | 30.0% |
| GCAGTTAAAAGATAAGTACA+CGG | - | chr2_2:1736511-1736530 | None:intergenic | 30.0% | |
| AAGCATAACTGTGTAATCTA+TGG | - | chr2_2:1736544-1736563 | None:intergenic | 30.0% | |
| ! | TCTGAAGTAAATCCATTTGA+TGG | + | chr2_2:1736717-1736736 | Msa0229960:CDS | 30.0% |
| CTGAAGTAAATCCATTTGAT+GGG | + | chr2_2:1736718-1736737 | Msa0229960:CDS | 30.0% | |
| AACAAGATAAAGAGGTCTTA+CGG | - | chr2_2:1736756-1736775 | None:intergenic | 30.0% | |
| TTGTCATAGCCAAAATTTCA+GGG | - | chr2_2:1736901-1736920 | None:intergenic | 30.0% | |
| TTTGTCATAGCCAAAATTTC+AGG | - | chr2_2:1736902-1736921 | None:intergenic | 30.0% | |
| ATAAATATGTTGAGGTCGAA+CGG | - | chr2_2:1737017-1737036 | None:intergenic | 30.0% | |
| AACTCATCAAACCATATACA+AGG | + | chr2_2:1737179-1737198 | Msa0229960:CDS | 30.0% | |
| GCTGTACCTTAGATATAAAT+GGG | - | chr2_2:1737213-1737232 | None:intergenic | 30.0% | |
| TGCTGTACCTTAGATATAAA+TGG | - | chr2_2:1737214-1737233 | None:intergenic | 30.0% | |
| ATTCCACTAATTCGTTTGTT+GGG | - | chr2_2:1737279-1737298 | None:intergenic | 30.0% | |
| TATTCCACTAATTCGTTTGT+TGG | - | chr2_2:1737280-1737299 | None:intergenic | 30.0% | |
| GTAAGAAAAAGGGAAAACAA+AGG | - | chr2_2:1737472-1737491 | None:intergenic | 30.0% | |
| AATTAAACCCATTAATTCGC+AGG | + | chr2_2:1737607-1737626 | Msa0229960:intron | 30.0% | |
| TTAAGTTCCTGCGAATTAAT+GGG | - | chr2_2:1737617-1737636 | None:intergenic | 30.0% | |
| ATTAAGTTCCTGCGAATTAA+TGG | - | chr2_2:1737618-1737637 | None:intergenic | 30.0% | |
| CAGTTTCTATATCTTACAAC+TGG | + | chr2_2:1737744-1737763 | Msa0229960:intron | 30.0% | |
| ATAACATTGTTCAGGTCAAA+AGG | + | chr2_2:1737818-1737837 | Msa0229960:intron | 30.0% | |
| TTAATAGATTGTAGGCTGTA+TGG | + | chr2_2:1737987-1738006 | Msa0229960:three_prime_UTR | 30.0% | |
| GTAAATCAAGAATCACAAGT+TGG | - | chr2_2:1738055-1738074 | None:intergenic | 30.0% | |
| ! | ATAGCGGAGGAATTAAGTAA+CGG | - | chr2_2:1731131-1731150 | None:intergenic | 35.0% |
| !! | CGAGTTAGGGTTTTATAGAT+TGG | - | chr2_2:1731211-1731230 | None:intergenic | 35.0% |
| TGTGAAATCGATTGAGTTAG+AGG | - | chr2_2:1731237-1731256 | None:intergenic | 35.0% | |
| ! | CAATCGATTTCACACAATCA+TGG | + | chr2_2:1731243-1731262 | Msa0229960:exon | 35.0% |
| !! | AAATGAGAAAGAGCGTTTAC+CGG | - | chr2_2:1731272-1731291 | None:intergenic | 35.0% |
| ! | ACCATGACATTGTTATTCTG+GGG | - | chr2_2:1731525-1731544 | None:intergenic | 35.0% |
| ! | CACCATGACATTGTTATTCT+GGG | - | chr2_2:1731526-1731545 | None:intergenic | 35.0% |
| !! | GCGTTTATTTTCTTGTGTTG+AGG | + | chr2_2:1731546-1731565 | Msa0229960:intron | 35.0% |
| ! | TCTTCGCTTCTTTTCAGAAT+TGG | - | chr2_2:1731588-1731607 | None:intergenic | 35.0% |
| !! | TTTTTGATTCAACGTTCCTG+TGG | + | chr2_2:1731651-1731670 | Msa0229960:intron | 35.0% |
| TATCTCCTCATAAAATCCAC+AGG | - | chr2_2:1731670-1731689 | None:intergenic | 35.0% | |
| TAATTGAATAGGGCCATGTT+TGG | - | chr2_2:1732081-1732100 | None:intergenic | 35.0% | |
| AGTTATGCAAAGGTTAGCAT+TGG | - | chr2_2:1732130-1732149 | None:intergenic | 35.0% | |
| AATGCTAACCTTTGCATAAC+TGG | + | chr2_2:1732129-1732148 | Msa0229960:intron | 35.0% | |
| ATGCTAACCTTTGCATAACT+GGG | + | chr2_2:1732130-1732149 | Msa0229960:intron | 35.0% | |
| CATATGTTATCATTTCCCTG+TGG | - | chr2_2:1732313-1732332 | None:intergenic | 35.0% | |
| TACACTAACAAGTGTCCTAA+GGG | - | chr2_2:1732336-1732355 | None:intergenic | 35.0% | |
| TTCAAGACATTATGACTTCG+AGG | + | chr2_2:1732419-1732438 | Msa0229960:intron | 35.0% | |
| CTTAATGTGTTTAGGTCAGT+TGG | - | chr2_2:1732491-1732510 | None:intergenic | 35.0% | |
| ACTGACCTAAACACATTAAG+TGG | + | chr2_2:1732491-1732510 | Msa0229960:intron | 35.0% | |
| ATAAATGTAAGCGGAGAAAG+TGG | - | chr2_2:1732649-1732668 | None:intergenic | 35.0% | |
| ! | TAGTTTGTGGTTCAACTTCA+AGG | + | chr2_2:1732950-1732969 | Msa0229960:intron | 35.0% |
| TCTTCTGCTTGTTTACATAC+AGG | + | chr2_2:1733011-1733030 | Msa0229960:intron | 35.0% | |
| TGCTTGTTTACATACAGGTT+TGG | + | chr2_2:1733016-1733035 | Msa0229960:intron | 35.0% | |
| AACAGATCATGGCATCAATA+TGG | - | chr2_2:1733218-1733237 | None:intergenic | 35.0% | |
| ACATGGCATGCAAAATAGAT+TGG | - | chr2_2:1733437-1733456 | None:intergenic | 35.0% | |
| ! | TGGAAGGTATAAAGAGATGA+TGG | + | chr2_2:1733521-1733540 | Msa0229960:CDS | 35.0% |
| ! | GCACTTTTCACTATAGTTAC+GGG | - | chr2_2:1733589-1733608 | None:intergenic | 35.0% |
| TCTTGAAGAGGCAAAAAATG+AGG | + | chr2_2:1733695-1733714 | Msa0229960:CDS | 35.0% | |
| TTCTTTGACATTGGGGAATA+TGG | + | chr2_2:1733841-1733860 | Msa0229960:CDS | 35.0% | |
| TCTATTCTGTCAGATCCTTA+AGG | + | chr2_2:1733999-1734018 | Msa0229960:intron | 35.0% | |
| AAGATCTGTGAAGTTCCTTA+AGG | - | chr2_2:1734017-1734036 | None:intergenic | 35.0% | |
| ! | TCAGCTTTTAACCGTTTACA+CGG | + | chr2_2:1734223-1734242 | Msa0229960:intron | 35.0% |
| ACGGTGTTTCATATTGTTTG+TGG | + | chr2_2:1734242-1734261 | Msa0229960:intron | 35.0% | |
| AGTACTGTGTCTATCTAGAA+TGG | + | chr2_2:1734322-1734341 | Msa0229960:intron | 35.0% | |
| ! | GTACTGTGTCTATCTAGAAT+GGG | + | chr2_2:1734323-1734342 | Msa0229960:intron | 35.0% |
| ! | TACTGTGTCTATCTAGAATG+GGG | + | chr2_2:1734324-1734343 | Msa0229960:intron | 35.0% |
| ! | ATAAGTTTTGCATGTATGGG+AGG | + | chr2_2:1734374-1734393 | Msa0229960:intron | 35.0% |
| GTAGTCAAAATCGAGATCTT+AGG | + | chr2_2:1734463-1734482 | Msa0229960:intron | 35.0% | |
| TAATGTGAGTGCTATGAATC+TGG | + | chr2_2:1734852-1734871 | Msa0229960:intron | 35.0% | |
| AATGTGAGTGCTATGAATCT+GGG | + | chr2_2:1734853-1734872 | Msa0229960:intron | 35.0% | |
| AACCCACTAAGCAATAATTG+TGG | - | chr2_2:1734928-1734947 | None:intergenic | 35.0% | |
| ! | TTCCTTAAAATTCGGGTTTC+CGG | - | chr2_2:1735116-1735135 | None:intergenic | 35.0% |
| GGTTGTCTTCCTTAAAATTC+GGG | - | chr2_2:1735123-1735142 | None:intergenic | 35.0% | |
| CGGTTGTCTTCCTTAAAATT+CGG | - | chr2_2:1735124-1735143 | None:intergenic | 35.0% | |
| !! | CGAATTTTAAGGAAGACAAC+CGG | + | chr2_2:1735122-1735141 | Msa0229960:intron | 35.0% |
| ! | TCCACTAGTGTATTTTCGTT+TGG | + | chr2_2:1735334-1735353 | Msa0229960:intron | 35.0% |
| ACCAAACGAAAATACACTAG+TGG | - | chr2_2:1735338-1735357 | None:intergenic | 35.0% | |
| ! | GTTCATCTTCTTTGAAAAGG+AGG | + | chr2_2:1735356-1735375 | Msa0229960:intron | 35.0% |
| ! | TCATCTTCTTTGAAAAGGAG+GGG | + | chr2_2:1735358-1735377 | Msa0229960:intron | 35.0% |
| TTCACATGAAAATATGAGCC+TGG | - | chr2_2:1735425-1735444 | None:intergenic | 35.0% | |
| !! | GTCGATTTGTCTTATGCTTA+GGG | + | chr2_2:1735508-1735527 | Msa0229960:intron | 35.0% |
| TGACAAATTCTGGTGAACAA+AGG | - | chr2_2:1735535-1735554 | None:intergenic | 35.0% | |
| TCATGGACATTGACAAATTC+TGG | - | chr2_2:1735545-1735564 | None:intergenic | 35.0% | |
| AATACGACTCTAACTACGTA+AGG | - | chr2_2:1735669-1735688 | None:intergenic | 35.0% | |
| !! | GAGGAAGTGTTAGAATATCT+TGG | + | chr2_2:1735801-1735820 | Msa0229960:intron | 35.0% |
| ! | GCATTGTAGAGTATCTTAGA+CGG | + | chr2_2:1735858-1735877 | Msa0229960:intron | 35.0% |
| !! | CATGACTTGTTTCCTTAACT+AGG | + | chr2_2:1735922-1735941 | Msa0229960:intron | 35.0% |
| ACTTGTTTCCTTAACTAGGA+CGG | + | chr2_2:1735926-1735945 | Msa0229960:intron | 35.0% | |
| ! | ACTTGATAGTAAGTGCTTTC+TGG | - | chr2_2:1736109-1736128 | None:intergenic | 35.0% |
| TCAACATGTTTGCAAGAACA+AGG | - | chr2_2:1736692-1736711 | None:intergenic | 35.0% | |
| TGTTCTTGCAAACATGTTGA+TGG | + | chr2_2:1736692-1736711 | Msa0229960:CDS | 35.0% | |
| GGAATGGGATAACTGAAAAA+TGG | - | chr2_2:1736790-1736809 | None:intergenic | 35.0% | |
| AAACCATCCTCAACTTAGAA+GGG | - | chr2_2:1736822-1736841 | None:intergenic | 35.0% | |
| ! | CAAGAATGACCCTGAAATTT+TGG | + | chr2_2:1736889-1736908 | Msa0229960:CDS | 35.0% |
| GGAATTTGAGAAAATCCTGA+AGG | + | chr2_2:1736955-1736974 | Msa0229960:CDS | 35.0% | |
| GACACAATAAAATCACCTTC+AGG | - | chr2_2:1736973-1736992 | None:intergenic | 35.0% | |
| ! | GAAGGTGATTTTATTGTGTC+TGG | + | chr2_2:1736973-1736992 | Msa0229960:intron | 35.0% |
| GATAAATGGATCATCCATGA+TGG | - | chr2_2:1737107-1737126 | None:intergenic | 35.0% | |
| GCTAAAGAATATCAGAACAC+AGG | + | chr2_2:1737147-1737166 | Msa0229960:CDS | 35.0% | |
| TCAAACCATATACAAGGATC+AGG | + | chr2_2:1737185-1737204 | Msa0229960:CDS | 35.0% | |
| CAGGATCCCATTTATATCTA+AGG | + | chr2_2:1737204-1737223 | Msa0229960:CDS | 35.0% | |
| GTTTAAGGGTTATGGTATGT+TGG | + | chr2_2:1737383-1737402 | Msa0229960:intron | 35.0% | |
| TGCGTCCACAAAATAATGTT+TGG | - | chr2_2:1737443-1737462 | None:intergenic | 35.0% | |
| TAGGAAAGGGGTAAGAAAAA+GGG | - | chr2_2:1737482-1737501 | None:intergenic | 35.0% | |
| ATAGGAAAGGGGTAAGAAAA+AGG | - | chr2_2:1737483-1737502 | None:intergenic | 35.0% | |
| AAGGTAACTAGGATAGGAAA+GGG | - | chr2_2:1737495-1737514 | None:intergenic | 35.0% | |
| CTATATCTTACAACTGGACT+TGG | + | chr2_2:1737750-1737769 | Msa0229960:intron | 35.0% | |
| ! | AATGAAGAAGTATACAGCTG+TGG | + | chr2_2:1737841-1737860 | Msa0229960:CDS | 35.0% |
| AGTATACAGCTGTGGATAAA+TGG | + | chr2_2:1737849-1737868 | Msa0229960:CDS | 35.0% | |
| TTAACCAACTCTGTTGTTGA+TGG | - | chr2_2:1737903-1737922 | None:intergenic | 35.0% | |
| AATTCATACACCAGACAGTA+TGG | - | chr2_2:1737927-1737946 | None:intergenic | 35.0% | |
| TTAGGGGGTTTATTACTCTA+TGG | + | chr2_2:1738012-1738031 | Msa0229960:three_prime_UTR | 35.0% | |
| ! | TCACAAGTTGGATTTCACTT+CGG | - | chr2_2:1738043-1738062 | None:intergenic | 35.0% |
| GAGAATGGGAAAGGAAATAG+CGG | - | chr2_2:1731147-1731166 | None:intergenic | 40.0% | |
| GAAAAATAAGAACCCGGTGA+GGG | - | chr2_2:1731176-1731195 | None:intergenic | 40.0% | |
| GAGTGGGAAAAATAAGAACC+CGG | - | chr2_2:1731182-1731201 | None:intergenic | 40.0% | |
| TATAGATTGGAGCAGTGAGT+GGG | - | chr2_2:1731198-1731217 | None:intergenic | 40.0% | |
| TTATAGATTGGAGCAGTGAG+TGG | - | chr2_2:1731199-1731218 | None:intergenic | 40.0% | |
| TTTCACACAATCATGGCTTC+CGG | + | chr2_2:1731250-1731269 | Msa0229960:exon | 40.0% | |
| ACCCCAGAATAACAATGTCA+TGG | + | chr2_2:1731521-1731540 | Msa0229960:intron | 40.0% | |
| ! | CCACCATGACATTGTTATTC+TGG | - | chr2_2:1731527-1731546 | None:intergenic | 40.0% |
| CCAGAATAACAATGTCATGG+TGG | + | chr2_2:1731524-1731543 | Msa0229960:intron | 40.0% | |
| !! | CTTGTGTTGAGGCTAGTTTA+CGG | + | chr2_2:1731557-1731576 | Msa0229960:intron | 40.0% |
| !! | TTGTGTTGAGGCTAGTTTAC+GGG | + | chr2_2:1731558-1731577 | Msa0229960:intron | 40.0% |
| ! | ACGTTCCTGTGGATTTTATG+AGG | + | chr2_2:1731662-1731681 | Msa0229960:intron | 40.0% |
| ! | TTCTTATATTTGGGACCGGA+AGG | + | chr2_2:1732006-1732025 | Msa0229960:intron | 40.0% |
| TTGCCCTGTTTATCCAAACA+TGG | + | chr2_2:1732065-1732084 | Msa0229960:intron | 40.0% | |
| CTAGATACCCAGTTATGCAA+AGG | - | chr2_2:1732140-1732159 | None:intergenic | 40.0% | |
| GCATAACTGGGTATCTAGTT+CGG | + | chr2_2:1732142-1732161 | Msa0229960:intron | 40.0% | |
| AACTAAAAGCAGGTGTGTGT+GGG | - | chr2_2:1732223-1732242 | None:intergenic | 40.0% | |
| TAACTAAAAGCAGGTGTGTG+TGG | - | chr2_2:1732224-1732243 | None:intergenic | 40.0% | |
| GTACACTAACAAGTGTCCTA+AGG | - | chr2_2:1732337-1732356 | None:intergenic | 40.0% | |
| ! | ACACTTGTTAGTGTACTCGA+TGG | + | chr2_2:1732341-1732360 | Msa0229960:intron | 40.0% |
| GACATTATGACTTCGAGGTT+TGG | + | chr2_2:1732424-1732443 | Msa0229960:intron | 40.0% | |
| ! | TATGACTTCGAGGTTTGGTT+TGG | + | chr2_2:1732429-1732448 | Msa0229960:intron | 40.0% |
| TTCTGTAGATGCTGATATGG+AGG | + | chr2_2:1732526-1732545 | Msa0229960:intron | 40.0% | |
| TTGGTTGAAACTGATCCAGA+AGG | + | chr2_2:1733035-1733054 | Msa0229960:CDS | 40.0% | |
| ATGAGTGAGAAACAAGGGAA+GGG | - | chr2_2:1733354-1733373 | None:intergenic | 40.0% | |
| TATGAGTGAGAAACAAGGGA+AGG | - | chr2_2:1733355-1733374 | None:intergenic | 40.0% | |
| CTTATTCATGTACTGCACCA+TGG | + | chr2_2:1733377-1733396 | Msa0229960:intron | 40.0% | |
| ! | AGCATTATGGACTATGTCTC+TGG | + | chr2_2:1733615-1733634 | Msa0229960:CDS | 40.0% |
| ! | TATGGACTATGTCTCTGGTT+CGG | + | chr2_2:1733620-1733639 | Msa0229960:CDS | 40.0% |
| TTTGGTAGAATTCCTGCAGA+AGG | - | chr2_2:1733662-1733681 | None:intergenic | 40.0% | |
| CAATAATAGGAGAAACGGTG+AGG | - | chr2_2:1733746-1733765 | None:intergenic | 40.0% | |
| CACCGTTTCTCCTATTATTG+TGG | + | chr2_2:1733746-1733765 | Msa0229960:intron | 40.0% | |
| CACAATCTCTGCAAAATGAG+AGG | - | chr2_2:1733790-1733809 | None:intergenic | 40.0% | |
| ! | CTCTCATTTTGCAGAGATTG+TGG | + | chr2_2:1733788-1733807 | Msa0229960:intron | 40.0% |
| TTGACATTGGGGAATATGGT+CGG | + | chr2_2:1733845-1733864 | Msa0229960:CDS | 40.0% | |
| ! | GAAAGGAACTCAACTTTTGG+AGG | + | chr2_2:1734068-1734087 | Msa0229960:CDS | 40.0% |
| ATCGAGATCTTAGGCAAGAT+CGG | + | chr2_2:1734472-1734491 | Msa0229960:intron | 40.0% | |
| AACGAATCGTTTCAGGGAAT+AGG | + | chr2_2:1735014-1735033 | Msa0229960:intron | 40.0% | |
| ! | TCCTTAAAATTCGGGTTTCC+GGG | - | chr2_2:1735115-1735134 | None:intergenic | 40.0% |
| !! | ATCGTACGATTTGCTGATTC+CGG | - | chr2_2:1735144-1735163 | None:intergenic | 40.0% |
| GGATCGCAAAATCGTAGATA+CGG | - | chr2_2:1735171-1735190 | None:intergenic | 40.0% | |
| ! | TATCTACGATTTTGCGATCC+TGG | + | chr2_2:1735171-1735190 | Msa0229960:intron | 40.0% |
| !!! | GCGATTTTGACTACCATGAT+TGG | + | chr2_2:1735283-1735302 | Msa0229960:intron | 40.0% |
| CATTTGATCCAAAACACACC+AGG | + | chr2_2:1735404-1735423 | Msa0229960:intron | 40.0% | |
| ! | AATATGAGCCTGGTGTGTTT+TGG | - | chr2_2:1735415-1735434 | None:intergenic | 40.0% |
| TCATGTGAAAACAAGATGGC+TGG | + | chr2_2:1735436-1735455 | Msa0229960:intron | 40.0% | |
| !! | GGTCGATTTGTCTTATGCTT+AGG | + | chr2_2:1735507-1735526 | Msa0229960:intron | 40.0% |
| CTTGTTTCCTTAACTAGGAC+GGG | + | chr2_2:1735927-1735946 | Msa0229960:intron | 40.0% | |
| ATTGAGAAAGGGAGAGGAAA+CGG | - | chr2_2:1736036-1736055 | None:intergenic | 40.0% | |
| GTATGAATTGAGAAAGGGAG+AGG | - | chr2_2:1736042-1736061 | None:intergenic | 40.0% | |
| AATTCCCCATCCAAGGATAA+TGG | + | chr2_2:1736133-1736152 | Msa0229960:CDS | 40.0% | |
| ATTCCCCATCCAAGGATAAT+GGG | + | chr2_2:1736134-1736153 | Msa0229960:CDS | 40.0% | |
| TATCCCCATTATCCTTGGAT+GGG | - | chr2_2:1736141-1736160 | None:intergenic | 40.0% | |
| TTATCCCCATTATCCTTGGA+TGG | - | chr2_2:1736142-1736161 | None:intergenic | 40.0% | |
| TGGATTATCCCCATTATCCT+TGG | - | chr2_2:1736146-1736165 | None:intergenic | 40.0% | |
| ATGGGGATAATCCATGAATG+TGG | + | chr2_2:1736152-1736171 | Msa0229960:CDS | 40.0% | |
| TGGGGATAATCCATGAATGT+GGG | + | chr2_2:1736153-1736172 | Msa0229960:CDS | 40.0% | |
| ! | AGTAAATCCATTTGATGGGC+AGG | + | chr2_2:1736722-1736741 | Msa0229960:CDS | 40.0% |
| GAAACCATCCTCAACTTAGA+AGG | - | chr2_2:1736823-1736842 | None:intergenic | 40.0% | |
| TGATGGTTCTTCTGTTACTC+TGG | - | chr2_2:1737090-1737109 | None:intergenic | 40.0% | |
| GAGTAACAGAAGAACCATCA+TGG | + | chr2_2:1737090-1737109 | Msa0229960:intron | 40.0% | |
| ! | ACTAATTCGTTTGTTGGGCT+GGG | - | chr2_2:1737274-1737293 | None:intergenic | 40.0% |
| ATAACCCTTAAACCAGAGAC+TGG | - | chr2_2:1737376-1737395 | None:intergenic | 40.0% | |
| ! | AGTCTCTGGTTTAAGGGTTA+TGG | + | chr2_2:1737375-1737394 | Msa0229960:intron | 40.0% |
| AGGTAACTAGGATAGGAAAG+GGG | - | chr2_2:1737494-1737513 | None:intergenic | 40.0% | |
| GAAGGTAACTAGGATAGGAA+AGG | - | chr2_2:1737496-1737515 | None:intergenic | 40.0% | |
| CGTTAGAAGGTAACTAGGAT+AGG | - | chr2_2:1737501-1737520 | None:intergenic | 40.0% | |
| TCCTAGTTACCTTCTAACGA+TGG | + | chr2_2:1737502-1737521 | Msa0229960:intron | 40.0% | |
| ACCATCGTTAGAAGGTAACT+AGG | - | chr2_2:1737506-1737525 | None:intergenic | 40.0% | |
| AGTTACCTTCTAACGATGGT+TGG | + | chr2_2:1737506-1737525 | Msa0229960:intron | 40.0% | |
| TCAATCCAACCATCGTTAGA+AGG | - | chr2_2:1737514-1737533 | None:intergenic | 40.0% | |
| GACACATTGATCAAGTGAAC+CGG | + | chr2_2:1737699-1737718 | Msa0229960:CDS | 40.0% | |
| CAAACCATCAACAACAGAGT+TGG | + | chr2_2:1737896-1737915 | Msa0229960:CDS | 40.0% | |
| GTTGGTTAAACCATACTGTC+TGG | + | chr2_2:1737914-1737933 | Msa0229960:exon | 40.0% | |
| CAAGACAAAACTGCAAGTCA+GGG | - | chr2_2:1737963-1737982 | None:intergenic | 40.0% | |
| ACAAGACAAAACTGCAAGTC+AGG | - | chr2_2:1737964-1737983 | None:intergenic | 40.0% | |
| ATTGTAGGCTGTATGGAGTT+AGG | + | chr2_2:1737994-1738013 | Msa0229960:three_prime_UTR | 40.0% | |
| TTGTAGGCTGTATGGAGTTA+GGG | + | chr2_2:1737995-1738014 | Msa0229960:three_prime_UTR | 40.0% | |
| AATGGGAAAGGAAATAGCGG+AGG | - | chr2_2:1731144-1731163 | None:intergenic | 45.0% | |
| GGAAAAATAAGAACCCGGTG+AGG | - | chr2_2:1731177-1731196 | None:intergenic | 45.0% | |
| GAGTTAGAGGATCCGAGTTA+GGG | - | chr2_2:1731224-1731243 | None:intergenic | 45.0% | |
| TGAGTTAGAGGATCCGAGTT+AGG | - | chr2_2:1731225-1731244 | None:intergenic | 45.0% | |
| ATGCCTAAGTACGAACACCT+AGG | + | chr2_2:1731733-1731752 | Msa0229960:intron | 45.0% | |
| TGCCTAAGTACGAACACCTA+GGG | + | chr2_2:1731734-1731753 | Msa0229960:intron | 45.0% | |
| GGGCCATGTTTGGATAAACA+GGG | - | chr2_2:1732071-1732090 | None:intergenic | 45.0% | |
| AGGGCCATGTTTGGATAAAC+AGG | - | chr2_2:1732072-1732091 | None:intergenic | 45.0% | |
| ! | TGGGTATCTAGTTCGGATAG+CGG | + | chr2_2:1732149-1732168 | Msa0229960:intron | 45.0% |
| GATGCTGATATGGAGGACTA+TGG | + | chr2_2:1732533-1732552 | Msa0229960:intron | 45.0% | |
| TGGATTTGAGTACTCTGACG+AGG | + | chr2_2:1732553-1732572 | Msa0229960:CDS | 45.0% | |
| TGTGGTTCAACTTCAAGGCT+TGG | + | chr2_2:1732955-1732974 | Msa0229960:intron | 45.0% | |
| ! | AAACCAGAAAGTGCACCTTC+TGG | - | chr2_2:1733053-1733072 | None:intergenic | 45.0% |
| TTGTTCCATTCGCACTACCT+CGG | - | chr2_2:1733078-1733097 | None:intergenic | 45.0% | |
| AGTGCGAATGGAACAAGACA+AGG | + | chr2_2:1733082-1733101 | Msa0229960:CDS | 45.0% | |
| TGGAACAAGACAAGGCAGAA+TGG | + | chr2_2:1733090-1733109 | Msa0229960:CDS | 45.0% | |
| !! | CTTCAGAGCTTTAAATCCCC+TGG | - | chr2_2:1733475-1733494 | None:intergenic | 45.0% |
| !! | AAGAGATGATGGAAGCCTAC+AGG | + | chr2_2:1733532-1733551 | Msa0229960:CDS | 45.0% |
| !! | AGAGATGATGGAAGCCTACA+GGG | + | chr2_2:1733533-1733552 | Msa0229960:CDS | 45.0% |
| GTATGTCAACATCTCCCTGT+AGG | - | chr2_2:1733550-1733569 | None:intergenic | 45.0% | |
| CAAGAGCTCTCAGAGTTGTT+TGG | - | chr2_2:1733680-1733699 | None:intergenic | 45.0% | |
| ! | AACTCTGAGAGCTCTTGAAG+AGG | + | chr2_2:1733683-1733702 | Msa0229960:CDS | 45.0% |
| TAATAGGAGAAACGGTGAGG+CGG | - | chr2_2:1733743-1733762 | None:intergenic | 45.0% | |
| GGAATATGGTCGGATGAGTA+AGG | + | chr2_2:1733855-1733874 | Msa0229960:CDS | 45.0% | |
| TCACAGATCTTGTCAACGTG+AGG | + | chr2_2:1734026-1734045 | Msa0229960:CDS | 45.0% | |
| AGATCTTGTCAACGTGAGGA+TGG | + | chr2_2:1734030-1734049 | Msa0229960:CDS | 45.0% | |
| GGCACAGATGACCATAAGAA+AGG | + | chr2_2:1734051-1734070 | Msa0229960:CDS | 45.0% | |
| ATCTTAGGCAAGATCGGAGA+GGG | + | chr2_2:1734478-1734497 | Msa0229960:intron | 45.0% | |
| ! | TAAAATTCGGGTTTCCGGGT+TGG | - | chr2_2:1735111-1735130 | None:intergenic | 45.0% |
| ! | ACCCGGAAACCCGAATTTTA+AGG | + | chr2_2:1735111-1735130 | Msa0229960:intron | 45.0% |
| TCGCAAAATCGTAGATACGG+CGG | - | chr2_2:1735168-1735187 | None:intergenic | 45.0% | |
| AAAATCGCGATCCAACTCGT+GGG | - | chr2_2:1735271-1735290 | None:intergenic | 45.0% | |
| TTCCCCATCCAAGGATAATG+GGG | + | chr2_2:1736135-1736154 | Msa0229960:CDS | 45.0% | |
| ATCCCCATTATCCTTGGATG+GGG | - | chr2_2:1736140-1736159 | None:intergenic | 45.0% | |
| GGGGATAATCCATGAATGTG+GGG | + | chr2_2:1736154-1736173 | Msa0229960:CDS | 45.0% | |
| GGGATAATCCATGAATGTGG+GGG | + | chr2_2:1736155-1736174 | Msa0229960:CDS | 45.0% | |
| GGATAATCCATGAATGTGGG+GGG | + | chr2_2:1736156-1736175 | Msa0229960:CDS | 45.0% | |
| ATGATGAAGCTGGGAATCAG+AGG | + | chr2_2:1736246-1736265 | Msa0229960:CDS | 45.0% | |
| GCGTTGCTTACTTCAAGCAT+TGG | - | chr2_2:1736277-1736296 | None:intergenic | 45.0% | |
| ! | AAATCCATTTGATGGGCAGG+AGG | + | chr2_2:1736725-1736744 | Msa0229960:CDS | 45.0% |
| AACTTAGAAGGGCTGGATCA+AGG | - | chr2_2:1736811-1736830 | None:intergenic | 45.0% | |
| GGGATCCTGATCCTTGTATA+TGG | - | chr2_2:1737193-1737212 | None:intergenic | 45.0% | |
| ! | CTAATTCGTTTGTTGGGCTG+GGG | - | chr2_2:1737273-1737292 | None:intergenic | 45.0% |
| ! | CACTAATTCGTTTGTTGGGC+TGG | - | chr2_2:1737275-1737294 | None:intergenic | 45.0% |
| CAGCCCAACAAACGAATTAG+TGG | + | chr2_2:1737273-1737292 | Msa0229960:intron | 45.0% | |
| ! | TCCTACCAGTCTCTGGTTTA+AGG | + | chr2_2:1737368-1737387 | Msa0229960:intron | 45.0% |
| ! | CCTACCAGTCTCTGGTTTAA+GGG | + | chr2_2:1737369-1737388 | Msa0229960:intron | 45.0% |
| TTCTATTCACGATGAGCAGC+AGG | - | chr2_2:1737416-1737435 | None:intergenic | 45.0% | |
| !!! | GCTACTCGTGTCGCTTATTT+TGG | + | chr2_2:1737661-1737680 | Msa0229960:CDS | 45.0% |
| TGTAGGCTGTATGGAGTTAG+GGG | + | chr2_2:1737996-1738015 | Msa0229960:three_prime_UTR | 45.0% | |
| !! | AAAAAAAAATTTCTTATATT+TGG | + | chr2_2:1731996-1732015 | Msa0229960:intron | 5.0% |
| !! | AAAAAAAATTTCTTATATTT+GGG | + | chr2_2:1731997-1732016 | Msa0229960:intron | 5.0% |
| ACGGTGATGTGTTTGCGCTT+AGG | - | chr2_2:1731112-1731131 | None:intergenic | 50.0% | |
| GGGAGTGAAGAGAATGGGAA+AGG | - | chr2_2:1731156-1731175 | None:intergenic | 50.0% | |
| GGTGAGGGAGTGAAGAGAAT+GGG | - | chr2_2:1731161-1731180 | None:intergenic | 50.0% | |
| CATTCTCTTCACTCCCTCAC+CGG | + | chr2_2:1731160-1731179 | Msa0229960:five_prime_UTR | 50.0% | |
| ATTCTCTTCACTCCCTCACC+GGG | + | chr2_2:1731161-1731180 | Msa0229960:five_prime_UTR | 50.0% | |
| TGCCCTAGGTGTTCGTACTT+AGG | - | chr2_2:1731739-1731758 | None:intergenic | 50.0% | |
| ACGAACACCTAGGGCATGTT+TGG | + | chr2_2:1731743-1731762 | Msa0229960:intron | 50.0% | |
| CGTCAATCCAAACATGCCCT+AGG | - | chr2_2:1731753-1731772 | None:intergenic | 50.0% | |
| GTACTCTGACGAGGAACAAG+AGG | + | chr2_2:1732562-1732581 | Msa0229960:CDS | 50.0% | |
| ! | GATCCAGAAGGTGCACTTTC+TGG | + | chr2_2:1733047-1733066 | Msa0229960:CDS | 50.0% |
| !!! | TGCACTTTCTGGTTTTGCCG+AGG | + | chr2_2:1733058-1733077 | Msa0229960:CDS | 50.0% |
| ! | TTTTGCCGAGGTAGTGCGAA+TGG | + | chr2_2:1733070-1733089 | Msa0229960:CDS | 50.0% |
| !! | GGTTCGGCTAGCCAGAATTT+TGG | + | chr2_2:1733636-1733655 | Msa0229960:CDS | 50.0% |
| CCTGCAGAAGGCCAAAATTC+TGG | - | chr2_2:1733650-1733669 | None:intergenic | 50.0% | |
| !! | CCAGAATTTTGGCCTTCTGC+AGG | + | chr2_2:1733647-1733666 | Msa0229960:CDS | 50.0% |
| GATCTTAGGCAAGATCGGAG+AGG | + | chr2_2:1734477-1734496 | Msa0229960:intron | 50.0% | |
| TCTTAGGCAAGATCGGAGAG+GGG | + | chr2_2:1734479-1734498 | Msa0229960:intron | 50.0% | |
| GGGGTCACAAGATCGTGAAT+CGG | + | chr2_2:1734498-1734517 | Msa0229960:intron | 50.0% | |
| GGGTCACAAGATCGTGAATC+GGG | + | chr2_2:1734499-1734518 | Msa0229960:intron | 50.0% | |
| GGTCACAAGATCGTGAATCG+GGG | + | chr2_2:1734500-1734519 | Msa0229960:intron | 50.0% | |
| GTCACAAGATCGTGAATCGG+GGG | + | chr2_2:1734501-1734520 | Msa0229960:intron | 50.0% | |
| TGAATCGGGGGATCGTAACA+CGG | + | chr2_2:1734513-1734532 | Msa0229960:intron | 50.0% | |
| GTATGGCCGGAATCGGAATA+TGG | - | chr2_2:1735206-1735225 | None:intergenic | 50.0% | |
| AATCGTACGATCCCACGAGT+TGG | + | chr2_2:1735257-1735276 | Msa0229960:intron | 50.0% | |
| CAAAATCGCGATCCAACTCG+TGG | - | chr2_2:1735272-1735291 | None:intergenic | 50.0% | |
| CTAGACTCCCGTCCTAGTTA+AGG | - | chr2_2:1735937-1735956 | None:intergenic | 50.0% | |
| AGTCAGCAATTCCCCATCCA+AGG | + | chr2_2:1736126-1736145 | Msa0229960:CDS | 50.0% | |
| ! | GCATTTTCCCCCCACATTCA+TGG | - | chr2_2:1736166-1736185 | None:intergenic | 50.0% |
| ATGTGGGGGGAAAATGCACA+TGG | + | chr2_2:1736169-1736188 | Msa0229960:CDS | 50.0% | |
| TTAGCCTCCTGCCCATCAAA+TGG | - | chr2_2:1736732-1736751 | None:intergenic | 50.0% | |
| GAAGGGCTGGATCAAGGAAT+GGG | - | chr2_2:1736805-1736824 | None:intergenic | 50.0% | |
| AGAAGGGCTGGATCAAGGAA+TGG | - | chr2_2:1736806-1736825 | None:intergenic | 50.0% | |
| GATCCAGCCCTTCTAAGTTG+AGG | + | chr2_2:1736812-1736831 | Msa0229960:intron | 50.0% | |
| CATCCTCAACTTAGAAGGGC+TGG | - | chr2_2:1736818-1736837 | None:intergenic | 50.0% | |
| ! | CAGCCCTTCTAAGTTGAGGA+TGG | + | chr2_2:1736816-1736835 | Msa0229960:intron | 50.0% |
| CAGCTATTCCTACCAGTCTC+TGG | + | chr2_2:1737361-1737380 | Msa0229960:intron | 50.0% | |
| CCCTTAAACCAGAGACTGGT+AGG | - | chr2_2:1737372-1737391 | None:intergenic | 50.0% | |
| AGCTGCTCAACATCATGCTC+AGG | - | chr2_2:1737644-1737663 | None:intergenic | 50.0% | |
| ! | TGATCAAGTGAACCGGCTCT+TGG | + | chr2_2:1737706-1737725 | Msa0229960:CDS | 50.0% |
| ! | TATCAGAGCGTTCCAAGAGC+CGG | - | chr2_2:1737721-1737740 | None:intergenic | 50.0% |
| GTAGGCTGTATGGAGTTAGG+GGG | + | chr2_2:1737997-1738016 | Msa0229960:three_prime_UTR | 50.0% | |
| CGGTGAGGGAGTGAAGAGAA+TGG | - | chr2_2:1731162-1731181 | None:intergenic | 55.0% | |
| ! | TCGGATAGCGGTCAAGAGTG+TGG | + | chr2_2:1732161-1732180 | Msa0229960:intron | 55.0% |
| GGTGTGTGTGGGAATGTGTG+CGG | - | chr2_2:1732212-1732231 | None:intergenic | 55.0% | |
| TGACGAGGAACAAGAGGAGC+AGG | + | chr2_2:1732568-1732587 | Msa0229960:CDS | 55.0% | |
| !! | GAATCGGAATATGGTGGGCG+CGG | - | chr2_2:1735197-1735216 | None:intergenic | 55.0% |
| CGCCCACCATATTCCGATTC+CGG | + | chr2_2:1735197-1735216 | Msa0229960:intron | 55.0% | |
| GGCCGGAATCGGAATATGGT+GGG | - | chr2_2:1735202-1735221 | None:intergenic | 55.0% | |
| TGGCCGGAATCGGAATATGG+TGG | - | chr2_2:1735203-1735222 | None:intergenic | 55.0% | |
| TGCTGGAGTATGGCCGGAAT+CGG | - | chr2_2:1735213-1735232 | None:intergenic | 55.0% | |
| TTGACGTGCTGGAGTATGGC+CGG | - | chr2_2:1735219-1735238 | None:intergenic | 55.0% | |
| GCCATACTCCAGCACGTCAA+GGG | + | chr2_2:1735219-1735238 | Msa0229960:intron | 55.0% | |
| CCATACTCCAGCACGTCAAG+GGG | + | chr2_2:1735220-1735239 | Msa0229960:intron | 55.0% | |
| GGCTCTTGGAACGCTCTGAT+AGG | + | chr2_2:1737720-1737739 | Msa0229960:CDS | 55.0% | |
| GGCCATACTCCAGCACGTCA+AGG | + | chr2_2:1735218-1735237 | Msa0229960:intron | 60.0% | |
| CCCCTTGACGTGCTGGAGTA+TGG | - | chr2_2:1735223-1735242 | None:intergenic | 60.0% | |
| CTTGTTGCCCCTTGACGTGC+TGG | - | chr2_2:1735230-1735249 | None:intergenic | 60.0% | |
| ! | CGTTTGTTGGGCTGGGGCAA+GGG | - | chr2_2:1737267-1737286 | None:intergenic | 60.0% |
| ! | TCGTTTGTTGGGCTGGGGCA+AGG | - | chr2_2:1737268-1737287 | None:intergenic | 60.0% |
| ! | TGCACATGGCAGAGCGCCAG+TGG | + | chr2_2:1736183-1736202 | Msa0229960:CDS | 65.0% |
| ! | GCACATGGCAGAGCGCCAGT+GGG | + | chr2_2:1736184-1736203 | Msa0229960:CDS | 65.0% |
| CTGTAGCTGCGTCAGCCCAC+TGG | - | chr2_2:1736202-1736221 | None:intergenic | 65.0% | |
| !! | GGAATATGGTGGGCGCGGCC+AGG | - | chr2_2:1735192-1735211 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 1731098 | 1738159 | 1731098 | ID=Msa0229960;Name=Msa0229960 |
| chr2_2 | mRNA | 1731098 | 1738159 | 1731098 | ID=Msa0229960-mRNA-1;Parent=Msa0229960;Name=Msa0229960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=164|1|1|1|1|1|12|237|439 |
| chr2_2 | exon | 1731098 | 1731271 | 1731098 | ID=Msa0229960-mRNA-1:exon:616;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1732534 | 1732626 | 1732534 | ID=Msa0229960-mRNA-1:exon:617;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1733033 | 1733111 | 1733033 | ID=Msa0229960-mRNA-1:exon:618;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1733476 | 1733716 | 1733476 | ID=Msa0229960-mRNA-1:exon:619;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1733802 | 1733876 | 1733802 | ID=Msa0229960-mRNA-1:exon:620;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1734012 | 1734146 | 1734012 | ID=Msa0229960-mRNA-1:exon:621;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1736098 | 1736285 | 1736098 | ID=Msa0229960-mRNA-1:exon:622;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1736686 | 1736754 | 1736686 | ID=Msa0229960-mRNA-1:exon:623;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1736886 | 1736976 | 1736886 | ID=Msa0229960-mRNA-1:exon:624;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1737091 | 1737225 | 1737091 | ID=Msa0229960-mRNA-1:exon:625;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1737629 | 1737741 | 1737629 | ID=Msa0229960-mRNA-1:exon:626;Parent=Msa0229960-mRNA-1 |
| chr2_2 | exon | 1737832 | 1738159 | 1737832 | ID=Msa0229960-mRNA-1:exon:627;Parent=Msa0229960-mRNA-1 |
| chr2_2 | five_prime_UTR | 1731098 | 1731261 | 1731098 | ID=Msa0229960-mRNA-1:five_prime_utr;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1731262 | 1731271 | 1731262 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1732534 | 1732626 | 1732534 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1733033 | 1733111 | 1733033 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1733476 | 1733716 | 1733476 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1733802 | 1733876 | 1733802 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1734012 | 1734146 | 1734012 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1736098 | 1736285 | 1736098 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1736686 | 1736754 | 1736686 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1736886 | 1736976 | 1736886 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1737091 | 1737225 | 1737091 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1737629 | 1737741 | 1737629 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | CDS | 1737832 | 1737922 | 1737832 | ID=Msa0229960-mRNA-1:cds;Parent=Msa0229960-mRNA-1 |
| chr2_2 | three_prime_UTR | 1737923 | 1738159 | 1737923 | ID=Msa0229960-mRNA-1:three_prime_utr;Parent=Msa0229960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
