Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042580 | AES81012.1 | 100.000 | 439 | 0 | 0 | 1 | 439 | 1 | 439 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042580 | sp|Q8W207|CSN2_ARATH | 86.530 | 438 | 59 | 0 | 1 | 438 | 1 | 438 | 0.0 | 794 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042580 | G7L2Q4 | 100.000 | 439 | 0 | 0 | 1 | 439 | 1 | 439 | 0.0 | 914 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0075740 | Msa1042580 | 0.800571 | 1.353827e-48 | -8.615850e-47 |
| Msa0075750 | Msa1042580 | 0.801920 | 7.169883e-49 | -8.615850e-47 |
| Msa0168310 | Msa1042580 | 0.814826 | 1.264247e-51 | -8.615850e-47 |
| Msa0229960 | Msa1042580 | 0.920142 | 1.860958e-87 | -8.615850e-47 |
| Msa1042580 | Msa1159440 | 0.899606 | 1.677617e-77 | -8.615850e-47 |
| Msa1042580 | Msa1159470 | 0.990054 | 7.554381e-181 | -8.615850e-47 |
| Msa1042580 | Msa1175100 | 0.820738 | 5.853832e-53 | -8.615850e-47 |
| Msa1042580 | Msa1221780 | -0.825412 | 4.755536e-54 | -8.615850e-47 |
| Msa1042580 | Msa1234470 | 0.818369 | 2.032019e-52 | -8.615850e-47 |
| Msa1042580 | Msa1306960 | 0.815568 | 8.647619e-52 | -8.615850e-47 |
| Msa0248680 | Msa1042580 | 0.800659 | 1.299309e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042580 | MtrunA17_Chr7g0254661 | 100.000 | 439 | 0 | 0 | 1 | 439 | 1 | 439 | 0.0 | 914 |
| Msa1042580 | MtrunA17_Chr3g0139291 | 24.403 | 377 | 265 | 8 | 33 | 400 | 14 | 379 | 5.94e-19 | 88.6 |
| Msa1042580 | MtrunA17_Chr1g0147501 | 23.077 | 377 | 270 | 7 | 33 | 400 | 13 | 378 | 3.90e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042580 | AT2G26990.1 | 86.530 | 438 | 59 | 0 | 1 | 438 | 1 | 438 | 0.0 | 794 |
| Msa1042580 | AT1G29150.2 | 24.847 | 326 | 226 | 7 | 84 | 400 | 61 | 376 | 3.96e-18 | 86.7 |
| Msa1042580 | AT1G29150.1 | 24.847 | 326 | 226 | 7 | 84 | 400 | 61 | 376 | 3.96e-18 | 86.7 |
Find 122 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAATGACCCTGAAATTT+TGG | 0.127892 | 7_1:-80541071 | Msa1042580:CDS |
| GCTACTCGTGTCGCTTATTT+TGG | 0.140084 | 7_1:-80540299 | Msa1042580:CDS |
| GATCCAGAAGGTGCACTTTC+TGG | 0.147949 | 7_1:-80544666 | Msa1042580:CDS |
| TCAATGTAATTTCTGATAAA+TGG | 0.196401 | 7_1:+80540842 | None:intergenic |
| ACTTGATAGTAAGTGCTTTC+TGG | 0.201814 | 7_1:+80541854 | None:intergenic |
| TTTGTCATAGCCAAAATTTC+AGG | 0.251146 | 7_1:+80541061 | None:intergenic |
| CAATATTTCATTTCGTTGAT+AGG | 0.253136 | 7_1:+80541027 | None:intergenic |
| TTCTTTGACATTGGGGAATA+TGG | 0.262917 | 7_1:-80543872 | Msa1042580:CDS |
| GGTTCGGCTAGCCAGAATTT+TGG | 0.278850 | 7_1:-80544077 | Msa1042580:CDS |
| TGCTGTACCTTAGATATAAA+TGG | 0.280335 | 7_1:+80540749 | None:intergenic |
| AGTATACAGCTGTGGATAAA+TGG | 0.289112 | 7_1:-80540111 | Msa1042580:CDS |
| TGTGAAATCGATTGAGTTAG+AGG | 0.304943 | 7_1:+80546480 | None:intergenic |
| TAAGAAAGGAACTCAACTTT+TGG | 0.311538 | 7_1:-80543649 | Msa1042580:CDS |
| AAAGTTGAGTTCCTTTCTTA+TGG | 0.315236 | 7_1:+80543652 | None:intergenic |
| CCTGCAGAAGGCCAAAATTC+TGG | 0.317661 | 7_1:+80544066 | None:intergenic |
| TGAGTTAGAGGATCCGAGTT+AGG | 0.322793 | 7_1:+80546492 | None:intergenic |
| GGGATCCTGATCCTTGTATA+TGG | 0.333383 | 7_1:+80540770 | None:intergenic |
| CAGGATCCCATTTATATCTA+AGG | 0.333424 | 7_1:-80540756 | Msa1042580:intron |
| AATTCCCCATCCAAGGATAA+TGG | 0.342632 | 7_1:-80541827 | Msa1042580:CDS |
| ATTGTAGGCTGTATGGAGTT+AGG | 0.348287 | 7_1:-80539966 | Msa1042580:three_prime_UTR |
| TTATTCTGTAGATGCTGATA+TGG | 0.357413 | 7_1:-80545189 | Msa1042580:intron |
| TGTTCTTGCAAACATGTTGA+TGG | 0.362435 | 7_1:-80541268 | Msa1042580:CDS |
| CTTGTGAATTAATAGATTGT+AGG | 0.364543 | 7_1:-80539981 | Msa1042580:three_prime_UTR |
| ATTCCCCATCCAAGGATAAT+GGG | 0.364812 | 7_1:-80541826 | Msa1042580:CDS |
| CAAGGGCTCTCAGAGTTGTT+TGG | 0.370001 | 7_1:+80544036 | None:intergenic |
| ACAAGACAAAACTGCAAGTC+AGG | 0.370547 | 7_1:+80539999 | None:intergenic |
| CATTCTCTTCACTCCCTCAC+CGG | 0.374770 | 7_1:-80546554 | Msa1042580:five_prime_UTR |
| TTGTAGGCTGTATGGAGTTA+GGG | 0.383250 | 7_1:-80539965 | Msa1042580:three_prime_UTR |
| AAACCAGAAAGTGCACCTTC+TGG | 0.388675 | 7_1:+80544663 | None:intergenic |
| AATTCATACACCAGACAGTA+TGG | 0.390682 | 7_1:+80540036 | None:intergenic |
| CTATCAACGAAATGAAATAT+TGG | 0.391350 | 7_1:-80541026 | Msa1042580:CDS |
| TCTATTCTGTCAGATCCTTA+AGG | 0.406357 | 7_1:-80543715 | Msa1042580:intron |
| TCTGAAGTAAATCCATTTGA+TGG | 0.407498 | 7_1:-80541243 | Msa1042580:CDS |
| TTTAAGAATTATGATGAAGC+TGG | 0.408606 | 7_1:-80541724 | Msa1042580:CDS |
| TGGATTATCCCCATTATCCT+TGG | 0.420400 | 7_1:+80541817 | None:intergenic |
| AAAGTGCATAAACAGCATTA+TGG | 0.430939 | 7_1:-80544111 | Msa1042580:CDS |
| TTAACCAACTCTGTTGTTGA+TGG | 0.434196 | 7_1:+80540060 | None:intergenic |
| TTAATAGATTGTAGGCTGTA+TGG | 0.435720 | 7_1:-80539973 | Msa1042580:three_prime_UTR |
| ACGGTGATGTGTTTGCGCTT+AGG | 0.447104 | 7_1:+80546605 | None:intergenic |
| TTTCACACAATCATGGCTTC+CGG | 0.449244 | 7_1:-80546464 | Msa1042580:intron |
| TGATCAAGTGAACCGGCTCT+TGG | 0.452232 | 7_1:-80540254 | Msa1042580:CDS |
| ATAACATTGTTCAGGTCAAA+AGG | 0.455143 | 7_1:-80540142 | Msa1042580:intron |
| CTGTAGCTGCGTCAGCCCAC+TGG | 0.464009 | 7_1:+80541761 | None:intergenic |
| GATGCTGATATGGAGGACTA+TGG | 0.466037 | 7_1:-80545179 | Msa1042580:CDS |
| GCTGTACCTTAGATATAAAT+GGG | 0.469818 | 7_1:+80540750 | None:intergenic |
| AGCATTATGGACTATGTCTC+TGG | 0.472310 | 7_1:-80544098 | Msa1042580:CDS |
| AAGAGATGATGGAAGCCTAC+AGG | 0.473002 | 7_1:-80544181 | Msa1042580:CDS |
| AAGATCTGTGAAGTTCCTTA+AGG | 0.474071 | 7_1:+80543700 | None:intergenic |
| CAATCGATTTCACACAATCA+TGG | 0.478997 | 7_1:-80546471 | Msa1042580:exon |
| ATTCTCTTCACTCCCTCACC+GGG | 0.485352 | 7_1:-80546553 | Msa1042580:five_prime_UTR |
| TTAAGAATTATGATGAAGCT+GGG | 0.488805 | 7_1:-80541723 | Msa1042580:CDS |
| GACACATTGATCAAGTGAAC+CGG | 0.491543 | 7_1:-80540261 | Msa1042580:CDS |
| AATCAATATTACAATTCAAA+AGG | 0.491929 | 7_1:-80545107 | Msa1042580:intron |
| GTCAAGCTTTATTATAGACT+TGG | 0.493826 | 7_1:-80544212 | Msa1042580:CDS |
| GAGTTAGAGGATCCGAGTTA+GGG | 0.494286 | 7_1:+80546493 | None:intergenic |
| TGCACATGGCAGAGCGCCAG+TGG | 0.497198 | 7_1:-80541777 | Msa1042580:CDS |
| TGGAAGGTATAAAGAGATGA+TGG | 0.498197 | 7_1:-80544192 | Msa1042580:CDS |
| TTGTCATAGCCAAAATTTCA+GGG | 0.501810 | 7_1:+80541062 | None:intergenic |
| AGTAAATCCATTTGATGGGC+AGG | 0.506781 | 7_1:-80541238 | Msa1042580:CDS |
| AGCTGCTCAACATCATGCTC+AGG | 0.507745 | 7_1:+80540319 | None:intergenic |
| CGGTGAGGGAGTGAAGAGAA+TGG | 0.508161 | 7_1:+80546555 | None:intergenic |
| TCAAACCATATACAAGGATC+AGG | 0.511702 | 7_1:-80540775 | Msa1042580:CDS |
| GGCTCTTGGAACGCTCTGAT+AGG | 0.517303 | 7_1:-80540240 | Msa1042580:intron |
| TTAGCCTCCTGCCCATCAAA+TGG | 0.517684 | 7_1:+80541231 | None:intergenic |
| TATGGACTATGTCTCTGGTT+CGG | 0.519186 | 7_1:-80544093 | Msa1042580:CDS |
| GGAATATGGTCGGATGAGTA+AGG | 0.522377 | 7_1:-80543858 | Msa1042580:intron |
| TTATCCCCATTATCCTTGGA+TGG | 0.523746 | 7_1:+80541821 | None:intergenic |
| TATCCCCATTATCCTTGGAT+GGG | 0.533048 | 7_1:+80541822 | None:intergenic |
| GGTGAGGGAGTGAAGAGAAT+GGG | 0.536821 | 7_1:+80546556 | None:intergenic |
| GCGTTGCTTACTTCAAGCAT+TGG | 0.536936 | 7_1:+80541686 | None:intergenic |
| GTTGGTTAAACCATACTGTC+TGG | 0.537218 | 7_1:-80540046 | Msa1042580:exon |
| ATCCCCATTATCCTTGGATG+GGG | 0.541050 | 7_1:+80541823 | None:intergenic |
| TTGACATTGGGGAATATGGT+CGG | 0.541126 | 7_1:-80543868 | Msa1042580:CDS |
| TGACGAGGAACAAGAGGAGC+AGG | 0.542929 | 7_1:-80545144 | Msa1042580:CDS |
| CTGAAGTAAATCCATTTGAT+GGG | 0.551373 | 7_1:-80541242 | Msa1042580:CDS |
| TATAGATTGGAGCAGTGAGT+GGG | 0.554067 | 7_1:+80546519 | None:intergenic |
| CAATCTATAAAACCCTAACT+CGG | 0.555489 | 7_1:-80546505 | Msa1042580:five_prime_UTR |
| GTAAATCAAGAATCACAAGT+TGG | 0.557191 | 7_1:+80539908 | None:intergenic |
| GGGAGTGAAGAGAATGGGAA+AGG | 0.558322 | 7_1:+80546561 | None:intergenic |
| TATCAGAGCGTTCCAAGAGC+CGG | 0.558355 | 7_1:+80540242 | None:intergenic |
| TTTGGTAGAATTCCTGCAGA+AGG | 0.558473 | 7_1:+80544054 | None:intergenic |
| CAAACCATCAACAACAGAGT+TGG | 0.558758 | 7_1:-80540064 | Msa1042580:CDS |
| TTGTTCCATTCGCACTACCT+CGG | 0.563644 | 7_1:+80544638 | None:intergenic |
| TTATAGATTGGAGCAGTGAG+TGG | 0.563997 | 7_1:+80546518 | None:intergenic |
| AACTCTGAGAGCCCTTGAAG+AGG | 0.570714 | 7_1:-80544030 | Msa1042580:CDS |
| AACTCATCAAACCATATACA+AGG | 0.571363 | 7_1:-80540781 | Msa1042580:CDS |
| AGCTTTATTATAGACTTGGA+AGG | 0.584874 | 7_1:-80544208 | Msa1042580:CDS |
| GAGTAACAGAAGAACCATCA+TGG | 0.585813 | 7_1:-80540870 | Msa1042580:CDS |
| TGGGGATAATCCATGAATGT+GGG | 0.586852 | 7_1:-80541807 | Msa1042580:CDS |
| TTCTGTAGATGCTGATATGG+AGG | 0.588074 | 7_1:-80545186 | Msa1042580:intron |
| TCACAAGTTGGATTTCACTT+CGG | 0.588342 | 7_1:+80539920 | None:intergenic |
| GTAGGCTGTATGGAGTTAGG+GGG | 0.590083 | 7_1:-80539963 | Msa1042580:three_prime_UTR |
| AGATCTTGTCAACGTGAGGA+TGG | 0.590088 | 7_1:-80543684 | Msa1042580:CDS |
| ATGGGGATAATCCATGAATG+TGG | 0.590124 | 7_1:-80541808 | Msa1042580:CDS |
| GATAAATGGATCATCCATGA+TGG | 0.594343 | 7_1:+80540856 | None:intergenic |
| TGGAACAAGACAAGGCAGAA+TGG | 0.594639 | 7_1:-80544623 | Msa1042580:intron |
| GGCACAGATGACCATAAGAA+AGG | 0.595066 | 7_1:-80543663 | Msa1042580:CDS |
| ATTTATCAGAAATTACATTG+AGG | 0.595350 | 7_1:-80540840 | Msa1042580:CDS |
| GTATGTCAACATCTCCCTGT+AGG | 0.595935 | 7_1:+80544166 | None:intergenic |
| GGAATTTGAGAAAATCCTGA+AGG | 0.598423 | 7_1:-80541005 | Msa1042580:intron |
| AGAGATGATGGAAGCCTACA+GGG | 0.600048 | 7_1:-80544180 | Msa1042580:CDS |
| TCAACATGTTTGCAAGAACA+AGG | 0.601457 | 7_1:+80541271 | None:intergenic |
| GAGAATGGGAAAGGAAATAG+CGG | 0.601583 | 7_1:+80546570 | None:intergenic |
| TGTAGGCTGTATGGAGTTAG+GGG | 0.603741 | 7_1:-80539964 | Msa1042580:three_prime_UTR |
| GCACATGGCAGAGCGCCAGT+GGG | 0.609748 | 7_1:-80541776 | Msa1042580:CDS |
| CAAGACAAAACTGCAAGTCA+GGG | 0.610796 | 7_1:+80540000 | None:intergenic |
| AGTCAGCAATTCCCCATCCA+AGG | 0.617382 | 7_1:-80541834 | Msa1042580:CDS |
| GTACTCTGACGAGGAACAAG+AGG | 0.622630 | 7_1:-80545150 | Msa1042580:CDS |
| ATGATGAAGCTGGGAATCAG+AGG | 0.623287 | 7_1:-80541714 | Msa1042580:CDS |
| AATGGGAAAGGAAATAGCGG+AGG | 0.625679 | 7_1:+80546573 | None:intergenic |
| GGGGATAATCCATGAATGTG+GGG | 0.625903 | 7_1:-80541806 | Msa1042580:CDS |
| TTGGTTGAAACTGATCCAGA+AGG | 0.628433 | 7_1:-80544678 | Msa1042580:CDS |
| GCTAAAGAATATCAGAACAC+AGG | 0.632877 | 7_1:-80540813 | Msa1042580:CDS |
| TTCCCCATCCAAGGATAATG+GGG | 0.633586 | 7_1:-80541825 | Msa1042580:CDS |
| GGGATAATCCATGAATGTGG+GGG | 0.639797 | 7_1:-80541805 | Msa1042580:CDS |
| AATGAAGAAGTATACAGCTG+TGG | 0.646266 | 7_1:-80540119 | Msa1042580:CDS |
| AAATCCATTTGATGGGCAGG+AGG | 0.647747 | 7_1:-80541235 | Msa1042580:CDS |
| AGTGCGAATGGAACAAGACA+AGG | 0.649447 | 7_1:-80544631 | Msa1042580:CDS |
| TCACAGATCTTGTCAACGTG+AGG | 0.658259 | 7_1:-80543688 | Msa1042580:CDS |
| ATAGCGGAGGAATTAAGTAA+CGG | 0.695108 | 7_1:+80546586 | None:intergenic |
| GGATAATCCATGAATGTGGG+GGG | 0.699496 | 7_1:-80541804 | Msa1042580:CDS |
| TGGATTTGAGTACTCTGACG+AGG | 0.708369 | 7_1:-80545159 | Msa1042580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAGAAATTTTTTTTTTC+AGG | + | chr7_1:80540721-80540740 | None:intergenic | 10.0% |
| !! | TTATTAGACTAAATAATTAT+GGG | - | chr7_1:80543569-80543588 | Msa1042580:intron | 10.0% |
| !! | ATACAGTAAAATAATAAATA+TGG | + | chr7_1:80544379-80544398 | None:intergenic | 10.0% |
| !! | TTGATATAATTGAAATTATA+AGG | + | chr7_1:80544551-80544570 | None:intergenic | 10.0% |
| !!! | TCAATTTTTAATTTCTATAA+TGG | - | chr7_1:80544808-80544827 | Msa1042580:intron | 10.0% |
| !! | AATATTTGTATATTGATATT+GGG | - | chr7_1:80545532-80545551 | Msa1042580:intron | 10.0% |
| !!! | TAGATATTTTTTGATAAAAA+AGG | + | chr7_1:80545808-80545827 | None:intergenic | 10.0% |
| !! | TAAAAATAATAACTAAAAGC+AGG | + | chr7_1:80540960-80540979 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTTTATTTTTGTG+AGG | - | chr7_1:80540973-80540992 | Msa1042580:intron | 15.0% |
| !! | AATCAATATTACAATTCAAA+AGG | - | chr7_1:80541332-80541351 | Msa1042580:intron | 15.0% |
| !! | TTACATTTATGAATTGAATT+TGG | - | chr7_1:80541386-80541405 | Msa1042580:intron | 15.0% |
| !!! | AATTGAATTTGGTTTATTTT+TGG | - | chr7_1:80541397-80541416 | Msa1042580:intron | 15.0% |
| !!! | ATTGAATTTGGTTTATTTTT+GGG | - | chr7_1:80541398-80541417 | Msa1042580:intron | 15.0% |
| !!! | ACATTTTAATTATTTTGACA+AGG | + | chr7_1:80541600-80541619 | None:intergenic | 15.0% |
| !!! | AATGTGTTCTTTTTTTTTTT+TGG | - | chr7_1:80542605-80542624 | Msa1042580:intron | 15.0% |
| !!! | ATGTGTTCTTTTTTTTTTTT+GGG | - | chr7_1:80542606-80542625 | Msa1042580:intron | 15.0% |
| !!! | ACACATTTTTTTTGTATATA+TGG | - | chr7_1:80543132-80543151 | Msa1042580:intron | 15.0% |
| !!! | ATATATGTTAATTTGTGATT+TGG | + | chr7_1:80543251-80543270 | None:intergenic | 15.0% |
| !! | GTTATTAGACTAAATAATTA+TGG | - | chr7_1:80543568-80543587 | Msa1042580:intron | 15.0% |
| !! | GTCAAAATAATAGTATATAT+TGG | - | chr7_1:80544204-80544223 | Msa1042580:CDS | 15.0% |
| !!! | ATTGAAATTATAAGGATTTT+AGG | + | chr7_1:80544543-80544562 | None:intergenic | 15.0% |
| !! | AAAATAAGATAAATATGTTG+AGG | + | chr7_1:80545504-80545523 | None:intergenic | 15.0% |
| !! | CAATATCAATATACAAATAT+TGG | + | chr7_1:80545533-80545552 | None:intergenic | 15.0% |
| !! | CAATATTTGTATATTGATAT+TGG | - | chr7_1:80545531-80545550 | Msa1042580:intron | 15.0% |
| !!! | TTTTTGATAAAAAAGGTATT+TGG | + | chr7_1:80545801-80545820 | None:intergenic | 15.0% |
| !! | AAATATTACTACTAAAAGAA+AGG | + | chr7_1:80546028-80546047 | None:intergenic | 15.0% |
| !!! | AACTGAATAGTTTAGATTTT+AGG | - | chr7_1:80540183-80540202 | Msa1042580:intron | 20.0% |
| !! | ACATCAGATATTCAATAAAT+CGG | + | chr7_1:80540655-80540674 | None:intergenic | 20.0% |
| !! | TATTGAATATCTGATGTATT+TGG | - | chr7_1:80540658-80540677 | Msa1042580:intron | 20.0% |
| !!! | TAATTATCTGATTGATAATG+TGG | + | chr7_1:80540685-80540704 | None:intergenic | 20.0% |
| !! | ATTCAATTCATAAATGTAAG+CGG | + | chr7_1:80541385-80541404 | None:intergenic | 20.0% |
| !! | CAAATAACAAAATACAATGA+TGG | + | chr7_1:80541495-80541514 | None:intergenic | 20.0% |
| !! | AAACATAAAACCACAATAAT+AGG | + | chr7_1:80542485-80542504 | None:intergenic | 20.0% |
| !!! | TATCTGCTTTTATTATCTAT+TGG | - | chr7_1:80543158-80543177 | Msa1042580:intron | 20.0% |
| !! | ATTATTGATCAACGTATTAA+AGG | - | chr7_1:80543429-80543448 | Msa1042580:intron | 20.0% |
| !! | AATCAGTAAAATAATACAAG+AGG | + | chr7_1:80543966-80543985 | None:intergenic | 20.0% |
| !!! | TCTTGTATTATTTTACTGAT+TGG | - | chr7_1:80543965-80543984 | Msa1042580:intron | 20.0% |
| !! | AGGAAATAAATCATCAAATA+TGG | + | chr7_1:80544128-80544147 | None:intergenic | 20.0% |
| !! | AGTCTAGTAATTATATCAAA+GGG | - | chr7_1:80544429-80544448 | Msa1042580:intron | 20.0% |
| !! | ACAAAAAAAACAAGATAAAG+AGG | + | chr7_1:80545243-80545262 | None:intergenic | 20.0% |
| !! | TCAATGTAATTTCTGATAAA+TGG | + | chr7_1:80545600-80545619 | None:intergenic | 20.0% |
| !! | ATTTATCAGAAATTACATTG+AGG | - | chr7_1:80545599-80545618 | Msa1042580:intron | 20.0% |
| !!! | TAAATTGTGTATTTAAAACC+TGG | - | chr7_1:80546256-80546275 | Msa1042580:intron | 20.0% |
| !! | TTTAACGTTAATAAAATACC+AGG | + | chr7_1:80546277-80546296 | None:intergenic | 20.0% |
| !!! | TTAGGTTTTTTACTTTGTAG+TGG | - | chr7_1:80540201-80540220 | Msa1042580:intron | 25.0% |
| ! | TGCTATAGAAATACTCTATT+CGG | - | chr7_1:80540601-80540620 | Msa1042580:intron | 25.0% |
| !! | AAATTTCTTATATTTGGGAC+CGG | - | chr7_1:80540729-80540748 | Msa1042580:intron | 25.0% |
| !!! | AGAAAGCATCTAATTGAATA+GGG | + | chr7_1:80540818-80540837 | None:intergenic | 25.0% |
| !!! | TAGAAAGCATCTAATTGAAT+AGG | + | chr7_1:80540819-80540838 | None:intergenic | 25.0% |
| ! | AAATCAACTAATCACGTTTA+TGG | + | chr7_1:80541553-80541572 | None:intergenic | 25.0% |
| !!! | TGTTTTGCAATTTTGAGATT+TGG | - | chr7_1:80541649-80541668 | Msa1042580:intron | 25.0% |
| ! | ACTTCATTATGGAACATATA+TGG | - | chr7_1:80541859-80541878 | Msa1042580:CDS | 25.0% |
| ! | GGTAACAAGTATAATAAACA+TGG | + | chr7_1:80542180-80542199 | None:intergenic | 25.0% |
| !! | TGTTTATTATACTTGTTACC+AGG | - | chr7_1:80542180-80542199 | Msa1042580:intron | 25.0% |
| !! | GTTTATTATACTTGTTACCA+GGG | - | chr7_1:80542181-80542200 | Msa1042580:intron | 25.0% |
| !! | TTTATTATACTTGTTACCAG+GGG | - | chr7_1:80542182-80542201 | Msa1042580:intron | 25.0% |
| !! | TGTAAGATTTTCTTTGACAT+TGG | - | chr7_1:80542558-80542577 | Msa1042580:intron | 25.0% |
| !! | GTAAGATTTTCTTTGACATT+GGG | - | chr7_1:80542559-80542578 | Msa1042580:intron | 25.0% |
| !! | TAAGATTTTCTTTGACATTG+GGG | - | chr7_1:80542560-80542579 | Msa1042580:intron | 25.0% |
| ! | ATCTGTTTGTATCTATCTAT+TGG | - | chr7_1:80542668-80542687 | Msa1042580:intron | 25.0% |
| !! | ACAAATAAGTTTTGCATGTA+TGG | - | chr7_1:80543095-80543114 | Msa1042580:intron | 25.0% |
| !! | CAAATAAGTTTTGCATGTAT+GGG | - | chr7_1:80543096-80543115 | Msa1042580:intron | 25.0% |
| ! | TTATCAATACTCCATAATTG+AGG | + | chr7_1:80543496-80543515 | None:intergenic | 25.0% |
| !! | ATTTTCATGTGAAAACAAGA+TGG | - | chr7_1:80543911-80543930 | Msa1042580:CDS | 25.0% |
| ! | AGAAATTCCAACAAATATCA+TGG | + | chr7_1:80544041-80544060 | None:intergenic | 25.0% |
| ! | TCTTGAATCTTAAGTACTAA+AGG | + | chr7_1:80544184-80544203 | None:intergenic | 25.0% |
| ! | GAGTCTAGTAATTATATCAA+AGG | - | chr7_1:80544428-80544447 | Msa1042580:intron | 25.0% |
| ! | GTCTAGTAATTATATCAAAG+GGG | - | chr7_1:80544430-80544449 | Msa1042580:intron | 25.0% |
| ! | TTTAGGTATGAATTGAGAAA+GGG | + | chr7_1:80544526-80544545 | None:intergenic | 25.0% |
| !!! | TTTTAGGTATGAATTGAGAA+AGG | + | chr7_1:80544527-80544546 | None:intergenic | 25.0% |
| ! | TTTAAGAATTATGATGAAGC+TGG | - | chr7_1:80544715-80544734 | Msa1042580:intron | 25.0% |
| ! | TTAAGAATTATGATGAAGCT+GGG | - | chr7_1:80544716-80544735 | Msa1042580:intron | 25.0% |
| ! | ATTAACATAGTTAATTGCAG+AGG | + | chr7_1:80544838-80544857 | None:intergenic | 25.0% |
| ! | CAACAAATTAGTAGCAATTA+TGG | + | chr7_1:80545134-80545153 | None:intergenic | 25.0% |
| !! | CATAATTGCTACTAATTTGT+TGG | - | chr7_1:80545132-80545151 | Msa1042580:CDS | 25.0% |
| ! | AGGTAAAAACAAGAAAATGA+GGG | + | chr7_1:80545326-80545345 | None:intergenic | 25.0% |
| ! | TAGGTAAAAACAAGAAAATG+AGG | + | chr7_1:80545327-80545346 | None:intergenic | 25.0% |
| ! | TCTGCAATAAATAATGTGTT+AGG | + | chr7_1:80545346-80545365 | None:intergenic | 25.0% |
| ! | CAATATTTCATTTCGTTGAT+AGG | + | chr7_1:80545415-80545434 | None:intergenic | 25.0% |
| ! | CTATCAACGAAATGAAATAT+TGG | - | chr7_1:80545413-80545432 | Msa1042580:intron | 25.0% |
| ! | GAATTAGTGGAATAAAGAAA+TGG | - | chr7_1:80545765-80545784 | Msa1042580:intron | 25.0% |
| !!! | ATAAGCCAAACATTATTTTG+TGG | - | chr7_1:80545914-80545933 | Msa1042580:intron | 25.0% |
| !! | ATTTTGGATAACAGAATTCA+AGG | - | chr7_1:80546156-80546175 | Msa1042580:intron | 25.0% |
| ! | ACGTTAAAATAACATTGTTC+AGG | - | chr7_1:80546289-80546308 | Msa1042580:intron | 25.0% |
| ! | CTTGTGAATTAATAGATTGT+AGG | - | chr7_1:80546458-80546477 | Msa1042580:intron | 25.0% |
| CAATCTATAAAACCCTAACT+CGG | - | chr7_1:80539934-80539953 | Msa1042580:three_prime_UTR | 30.0% | |
| ! | TGAAATAAGCGATTTAGCTT+CGG | + | chr7_1:80540069-80540088 | None:intergenic | 30.0% |
| !! | TTGCATAAGTTTTGTCAGTT+TGG | - | chr7_1:80540518-80540537 | Msa1042580:intron | 30.0% |
| ATTGTTTGTGTATAAGCTGT+CGG | + | chr7_1:80540562-80540581 | None:intergenic | 30.0% | |
| TATCTAAAAGTTACTCCTTC+CGG | + | chr7_1:80540751-80540770 | None:intergenic | 30.0% | |
| TGTTTCTTTGATATATCCAC+AGG | - | chr7_1:80541021-80541040 | Msa1042580:CDS | 30.0% | |
| GTTTCTTTGATATATCCACA+GGG | - | chr7_1:80541022-80541041 | Msa1042580:CDS | 30.0% | |
| AAATGATAACATATGCCCTT+AGG | - | chr7_1:80541045-80541064 | Msa1042580:CDS | 30.0% | |
| TGTAACCACTTAATGTGTTT+AGG | + | chr7_1:80541226-80541245 | None:intergenic | 30.0% | |
| TTATTCTGTAGATGCTGATA+TGG | - | chr7_1:80541250-80541269 | Msa1042580:CDS | 30.0% | |
| ! | ACAGACACAATCTAATTTGT+AGG | + | chr7_1:80541444-80541463 | None:intergenic | 30.0% |
| !! | TGTTGCTTACTAACTAGTTT+TGG | - | chr7_1:80541461-80541480 | Msa1042580:intron | 30.0% |
| ! | TTTAAGATAAGCATCATGAC+TGG | - | chr7_1:80541525-80541544 | Msa1042580:intron | 30.0% |
| !!! | GAGATTTGGTTTTTAGTTTG+TGG | - | chr7_1:80541663-80541682 | Msa1042580:intron | 30.0% |
| ! | TTTTCTCCTGTACTTCATTA+TGG | - | chr7_1:80541848-80541867 | Msa1042580:CDS | 30.0% |
| TATGTTCCATAATGAAGTAC+AGG | + | chr7_1:80541857-80541876 | None:intergenic | 30.0% | |
| TATATGGATGTTGAAGTTAG+TGG | - | chr7_1:80541875-80541894 | Msa1042580:intron | 30.0% | |
| ACGCAATAAATAACAGATCA+TGG | + | chr7_1:80541955-80541974 | None:intergenic | 30.0% | |
| ! | GAATGTTTCTCTTTTCGATT+TGG | - | chr7_1:80542003-80542022 | Msa1042580:intron | 30.0% |
| AGAATATGAGTGAGAAACAA+GGG | + | chr7_1:80542085-80542104 | None:intergenic | 30.0% | |
| AAGAATATGAGTGAGAAACA+AGG | + | chr7_1:80542086-80542105 | None:intergenic | 30.0% | |
| AAGATTACAAGACATTACCA+TGG | + | chr7_1:80542123-80542142 | None:intergenic | 30.0% | |
| !! | GTCAAGCTTTATTATAGACT+TGG | - | chr7_1:80542227-80542246 | Msa1042580:intron | 30.0% |
| !! | AGCTTTATTATAGACTTGGA+AGG | - | chr7_1:80542231-80542250 | Msa1042580:intron | 30.0% |
| ! | TGCACTTTTCACTATAGTTA+CGG | + | chr7_1:80542316-80542335 | None:intergenic | 30.0% |
| AAAGTGCATAAACAGCATTA+TGG | - | chr7_1:80542328-80542347 | Msa1042580:intron | 30.0% | |
| AACCACAATAATAGGAGAAA+CGG | + | chr7_1:80542477-80542496 | None:intergenic | 30.0% | |
| AAAGTTGAGTTCCTTTCTTA+TGG | + | chr7_1:80542790-80542809 | None:intergenic | 30.0% | |
| ! | TAAGAAAGGAACTCAACTTT+TGG | - | chr7_1:80542790-80542809 | Msa1042580:intron | 30.0% |
| !!! | CTTGAGTTTTTTGTTGTTCT+TGG | + | chr7_1:80542852-80542871 | None:intergenic | 30.0% |
| CAAGAACAACAAAAAACTCA+AGG | - | chr7_1:80542850-80542869 | Msa1042580:intron | 30.0% | |
| AATATGAAACACCGTGTAAA+CGG | + | chr7_1:80542962-80542981 | None:intergenic | 30.0% | |
| AAGTAGTCAAAATCGAATCT+AGG | - | chr7_1:80543185-80543204 | Msa1042580:intron | 30.0% | |
| !! | TTGCATTGATTCCTCAATTA+TGG | - | chr7_1:80543482-80543501 | Msa1042580:intron | 30.0% |
| TTTCCACAATTATTGCTTAG+TGG | - | chr7_1:80543517-80543536 | Msa1042580:intron | 30.0% | |
| TTCCACAATTATTGCTTAGT+GGG | - | chr7_1:80543518-80543537 | Msa1042580:intron | 30.0% | |
| !! | TTATTGCTTAGTGGGTTTAT+TGG | - | chr7_1:80543526-80543545 | Msa1042580:intron | 30.0% |
| TTAATGAAACGAATCGTTTC+AGG | - | chr7_1:80543593-80543612 | Msa1042580:CDS | 30.0% | |
| TAATGAAACGAATCGTTTCA+GGG | - | chr7_1:80543594-80543613 | Msa1042580:CDS | 30.0% | |
| ! | GATTTTTCATCTTCCAATCA+TGG | + | chr7_1:80543777-80543796 | None:intergenic | 30.0% |
| ! | TTGGTTCATCTTCTTTGAAA+AGG | - | chr7_1:80543831-80543850 | Msa1042580:intron | 30.0% |
| ! | TTCATCTTCTTTGAAAAGGA+GGG | - | chr7_1:80543835-80543854 | Msa1042580:intron | 30.0% |
| TCAATGTCCATGATATTTGT+TGG | - | chr7_1:80544031-80544050 | Msa1042580:CDS | 30.0% | |
| ! | TAGAGCATTAGATGATTACT+TGG | - | chr7_1:80544095-80544114 | Msa1042580:CDS | 30.0% |
| !! | TTTGCTCTTTTAAGCTTTAG+AGG | - | chr7_1:80544261-80544280 | Msa1042580:intron | 30.0% |
| GACAATTCACGTTTAATCAT+AGG | + | chr7_1:80544863-80544882 | None:intergenic | 30.0% | |
| !! | AATCTTTTAACTGCATACTG+TGG | - | chr7_1:80544919-80544938 | Msa1042580:intron | 30.0% |
| GCAGTTAAAAGATAAGTACA+CGG | + | chr7_1:80544990-80545009 | None:intergenic | 30.0% | |
| AAGCATAACTGTGTAATCTA+TGG | + | chr7_1:80545023-80545042 | None:intergenic | 30.0% | |
| ! | TCTGAAGTAAATCCATTTGA+TGG | - | chr7_1:80545196-80545215 | Msa1042580:intron | 30.0% |
| CTGAAGTAAATCCATTTGAT+GGG | - | chr7_1:80545197-80545216 | Msa1042580:intron | 30.0% | |
| AACAAGATAAAGAGGTCTTA+CGG | + | chr7_1:80545235-80545254 | None:intergenic | 30.0% | |
| TTGTCATAGCCAAAATTTCA+GGG | + | chr7_1:80545380-80545399 | None:intergenic | 30.0% | |
| TTTGTCATAGCCAAAATTTC+AGG | + | chr7_1:80545381-80545400 | None:intergenic | 30.0% | |
| ATAAATATGTTGAGGTCGAA+CGG | + | chr7_1:80545496-80545515 | None:intergenic | 30.0% | |
| AACTCATCAAACCATATACA+AGG | - | chr7_1:80545658-80545677 | Msa1042580:intron | 30.0% | |
| GCTGTACCTTAGATATAAAT+GGG | + | chr7_1:80545692-80545711 | None:intergenic | 30.0% | |
| TGCTGTACCTTAGATATAAA+TGG | + | chr7_1:80545693-80545712 | None:intergenic | 30.0% | |
| ATTCCACTAATTCGTTTGTT+GGG | + | chr7_1:80545758-80545777 | None:intergenic | 30.0% | |
| TATTCCACTAATTCGTTTGT+TGG | + | chr7_1:80545759-80545778 | None:intergenic | 30.0% | |
| GTAAGAAAAAGGGAAAACAA+AGG | + | chr7_1:80545951-80545970 | None:intergenic | 30.0% | |
| AATTAAACCCATTAATTCGC+AGG | - | chr7_1:80546086-80546105 | Msa1042580:intron | 30.0% | |
| TTAAGTTCCTGCGAATTAAT+GGG | + | chr7_1:80546096-80546115 | None:intergenic | 30.0% | |
| ATTAAGTTCCTGCGAATTAA+TGG | + | chr7_1:80546097-80546116 | None:intergenic | 30.0% | |
| CAGTTTCTATATCTTACAAC+TGG | - | chr7_1:80546223-80546242 | Msa1042580:intron | 30.0% | |
| ATAACATTGTTCAGGTCAAA+AGG | - | chr7_1:80546297-80546316 | Msa1042580:intron | 30.0% | |
| TTAATAGATTGTAGGCTGTA+TGG | - | chr7_1:80546466-80546485 | Msa1042580:exon | 30.0% | |
| GTAAATCAAGAATCACAAGT+TGG | + | chr7_1:80546534-80546553 | None:intergenic | 30.0% | |
| ! | ATAGCGGAGGAATTAAGTAA+CGG | + | chr7_1:80539856-80539875 | None:intergenic | 35.0% |
| !! | CGAGTTAGGGTTTTATAGAT+TGG | + | chr7_1:80539936-80539955 | None:intergenic | 35.0% |
| TGTGAAATCGATTGAGTTAG+AGG | + | chr7_1:80539962-80539981 | None:intergenic | 35.0% | |
| ! | CAATCGATTTCACACAATCA+TGG | - | chr7_1:80539968-80539987 | Msa1042580:three_prime_UTR | 35.0% |
| !! | AAATGAGAAAGAGCGTTTAC+CGG | + | chr7_1:80539997-80540016 | None:intergenic | 35.0% |
| ! | ACCATGACATTGTTATTCTG+GGG | + | chr7_1:80540251-80540270 | None:intergenic | 35.0% |
| ! | CACCATGACATTGTTATTCT+GGG | + | chr7_1:80540252-80540271 | None:intergenic | 35.0% |
| !! | GCGTTTATTTTCTTGTGTTG+AGG | - | chr7_1:80540272-80540291 | Msa1042580:CDS | 35.0% |
| ! | TCTTCGCTTCTTTTCAGAAT+TGG | + | chr7_1:80540314-80540333 | None:intergenic | 35.0% |
| !! | TTTTTGATTCAACGTTCCTG+TGG | - | chr7_1:80540379-80540398 | Msa1042580:intron | 35.0% |
| TATCTCCTCATAAAATCCAC+AGG | + | chr7_1:80540398-80540417 | None:intergenic | 35.0% | |
| TAATTGAATAGGGCCATGTT+TGG | + | chr7_1:80540808-80540827 | None:intergenic | 35.0% | |
| AGTTATGCAAAGGTTAGCAT+TGG | + | chr7_1:80540857-80540876 | None:intergenic | 35.0% | |
| AATGCTAACCTTTGCATAAC+TGG | - | chr7_1:80540856-80540875 | Msa1042580:CDS | 35.0% | |
| ATGCTAACCTTTGCATAACT+GGG | - | chr7_1:80540857-80540876 | Msa1042580:CDS | 35.0% | |
| AACTAAAAGCAGGTGTGTAT+GGG | + | chr7_1:80540950-80540969 | None:intergenic | 35.0% | |
| TAACTAAAAGCAGGTGTGTA+TGG | + | chr7_1:80540951-80540970 | None:intergenic | 35.0% | |
| CATATGTTATCATTTCCCTG+TGG | + | chr7_1:80541040-80541059 | None:intergenic | 35.0% | |
| TACACTAACAAGTGTCCTAA+GGG | + | chr7_1:80541063-80541082 | None:intergenic | 35.0% | |
| TTCAAGACATTATGACTTCG+AGG | - | chr7_1:80541146-80541165 | Msa1042580:intron | 35.0% | |
| CTTAATGTGTTTAGGTCAGT+TGG | + | chr7_1:80541218-80541237 | None:intergenic | 35.0% | |
| ACTGACCTAAACACATTAAG+TGG | - | chr7_1:80541218-80541237 | Msa1042580:intron | 35.0% | |
| ATAAATGTAAGCGGAGAAAG+TGG | + | chr7_1:80541376-80541395 | None:intergenic | 35.0% | |
| ! | TAGTTTGTGGTTCAACTTCA+AGG | - | chr7_1:80541676-80541695 | Msa1042580:intron | 35.0% |
| TCTTCTGCTTGTTTACATAC+AGG | - | chr7_1:80541737-80541756 | Msa1042580:CDS | 35.0% | |
| TGCTTGTTTACATACAGGTT+TGG | - | chr7_1:80541742-80541761 | Msa1042580:CDS | 35.0% | |
| AACAGATCATGGCATCAATA+TGG | + | chr7_1:80541944-80541963 | None:intergenic | 35.0% | |
| ACATGGCATGCAAAATAGAT+TGG | + | chr7_1:80542163-80542182 | None:intergenic | 35.0% | |
| ! | TGGAAGGTATAAAGAGATGA+TGG | - | chr7_1:80542247-80542266 | Msa1042580:intron | 35.0% |
| ! | GCACTTTTCACTATAGTTAC+GGG | + | chr7_1:80542315-80542334 | None:intergenic | 35.0% |
| !!! | CTCATTTTTTGCCTCTTCAA+GGG | + | chr7_1:80542423-80542442 | None:intergenic | 35.0% |
| TTCTTTGACATTGGGGAATA+TGG | - | chr7_1:80542567-80542586 | Msa1042580:intron | 35.0% | |
| TCTATTCTGTCAGATCCTTA+AGG | - | chr7_1:80542724-80542743 | Msa1042580:intron | 35.0% | |
| AAGATCTGTGAAGTTCCTTA+AGG | + | chr7_1:80542742-80542761 | None:intergenic | 35.0% | |
| ! | TCAGCTTTTAACCGTTTACA+CGG | - | chr7_1:80542948-80542967 | Msa1042580:intron | 35.0% |
| ACGGTGTTTCATATTGTTTG+TGG | - | chr7_1:80542967-80542986 | Msa1042580:intron | 35.0% | |
| AGTACTGTGTCTATCTAGAA+TGG | - | chr7_1:80543047-80543066 | Msa1042580:intron | 35.0% | |
| ! | GTACTGTGTCTATCTAGAAT+GGG | - | chr7_1:80543048-80543067 | Msa1042580:intron | 35.0% |
| ! | TACTGTGTCTATCTAGAATG+GGG | - | chr7_1:80543049-80543068 | Msa1042580:intron | 35.0% |
| ! | ATAAGTTTTGCATGTATGGG+AGG | - | chr7_1:80543099-80543118 | Msa1042580:intron | 35.0% |
| ATCTAGGCAATCATGTGAAT+CGG | - | chr7_1:80543201-80543220 | Msa1042580:intron | 35.0% | |
| ATAAGTGAGTGCTATGAATC+TGG | - | chr7_1:80543454-80543473 | Msa1042580:intron | 35.0% | |
| TAAGTGAGTGCTATGAATCT+GGG | - | chr7_1:80543455-80543474 | Msa1042580:intron | 35.0% | |
| AACCCACTAAGCAATAATTG+TGG | + | chr7_1:80543523-80543542 | None:intergenic | 35.0% | |
| GTATATCGAATATCCAGGAT+CGG | + | chr7_1:80543690-80543709 | None:intergenic | 35.0% | |
| ! | GTTCATCTTCTTTGAAAAGG+AGG | - | chr7_1:80543834-80543853 | Msa1042580:intron | 35.0% |
| ! | TCATCTTCTTTGAAAAGGAG+GGG | - | chr7_1:80543836-80543855 | Msa1042580:intron | 35.0% |
| TTCACATGAAAATATGAGCC+TGG | + | chr7_1:80543904-80543923 | None:intergenic | 35.0% | |
| !! | GTCGATTTGTCTTATGCTTA+GGG | - | chr7_1:80543987-80544006 | Msa1042580:intron | 35.0% |
| TGACAAATTCTGGTGAACAA+AGG | + | chr7_1:80544014-80544033 | None:intergenic | 35.0% | |
| TCATGGACATTGACAAATTC+TGG | + | chr7_1:80544024-80544043 | None:intergenic | 35.0% | |
| AATACGACTCTAACTACGTA+AGG | + | chr7_1:80544148-80544167 | None:intergenic | 35.0% | |
| !! | GAGGAAGTGTTAGAATATCT+TGG | - | chr7_1:80544280-80544299 | Msa1042580:intron | 35.0% |
| ! | GCATTGTAGAGTATCTTAGA+CGG | - | chr7_1:80544337-80544356 | Msa1042580:intron | 35.0% |
| !! | CATGACTTGTTTCCTTAACT+AGG | - | chr7_1:80544401-80544420 | Msa1042580:intron | 35.0% |
| ACTTGTTTCCTTAACTAGGA+CGG | - | chr7_1:80544405-80544424 | Msa1042580:intron | 35.0% | |
| ! | ACTTGATAGTAAGTGCTTTC+TGG | + | chr7_1:80544588-80544607 | None:intergenic | 35.0% |
| TCAACATGTTTGCAAGAACA+AGG | + | chr7_1:80545171-80545190 | None:intergenic | 35.0% | |
| TGTTCTTGCAAACATGTTGA+TGG | - | chr7_1:80545171-80545190 | Msa1042580:CDS | 35.0% | |
| GGAATGGGATAACTGAAAAA+TGG | + | chr7_1:80545269-80545288 | None:intergenic | 35.0% | |
| AAACCATCCTCAACTTAGAA+GGG | + | chr7_1:80545301-80545320 | None:intergenic | 35.0% | |
| ! | CAAGAATGACCCTGAAATTT+TGG | - | chr7_1:80545368-80545387 | Msa1042580:intron | 35.0% |
| GGAATTTGAGAAAATCCTGA+AGG | - | chr7_1:80545434-80545453 | Msa1042580:intron | 35.0% | |
| GACACAATAAAATCACCTTC+AGG | + | chr7_1:80545452-80545471 | None:intergenic | 35.0% | |
| ! | GAAGGTGATTTTATTGTGTC+TGG | - | chr7_1:80545452-80545471 | Msa1042580:intron | 35.0% |
| GATAAATGGATCATCCATGA+TGG | + | chr7_1:80545586-80545605 | None:intergenic | 35.0% | |
| GCTAAAGAATATCAGAACAC+AGG | - | chr7_1:80545626-80545645 | Msa1042580:intron | 35.0% | |
| TCAAACCATATACAAGGATC+AGG | - | chr7_1:80545664-80545683 | Msa1042580:intron | 35.0% | |
| CAGGATCCCATTTATATCTA+AGG | - | chr7_1:80545683-80545702 | Msa1042580:intron | 35.0% | |
| GTTTAAGGGTTATGGTATGT+TGG | - | chr7_1:80545862-80545881 | Msa1042580:intron | 35.0% | |
| TGCGTCCACAAAATAATGTT+TGG | + | chr7_1:80545922-80545941 | None:intergenic | 35.0% | |
| TAGGAAAGGGGTAAGAAAAA+GGG | + | chr7_1:80545961-80545980 | None:intergenic | 35.0% | |
| ATAGGAAAGGGGTAAGAAAA+AGG | + | chr7_1:80545962-80545981 | None:intergenic | 35.0% | |
| AAGGTAACTAGGATAGGAAA+GGG | + | chr7_1:80545974-80545993 | None:intergenic | 35.0% | |
| CTATATCTTACAACTGGACT+TGG | - | chr7_1:80546229-80546248 | Msa1042580:intron | 35.0% | |
| ! | AATGAAGAAGTATACAGCTG+TGG | - | chr7_1:80546320-80546339 | Msa1042580:intron | 35.0% |
| AGTATACAGCTGTGGATAAA+TGG | - | chr7_1:80546328-80546347 | Msa1042580:intron | 35.0% | |
| TTAACCAACTCTGTTGTTGA+TGG | + | chr7_1:80546382-80546401 | None:intergenic | 35.0% | |
| AATTCATACACCAGACAGTA+TGG | + | chr7_1:80546406-80546425 | None:intergenic | 35.0% | |
| TTAGGGGGTTTATTACTCTA+TGG | - | chr7_1:80546491-80546510 | Msa1042580:five_prime_UTR | 35.0% | |
| ! | TCACAAGTTGGATTTCACTT+CGG | + | chr7_1:80546522-80546541 | None:intergenic | 35.0% |
| GAGAATGGGAAAGGAAATAG+CGG | + | chr7_1:80539872-80539891 | None:intergenic | 40.0% | |
| GAAAAATAAGAACCCGGTGA+GGG | + | chr7_1:80539901-80539920 | None:intergenic | 40.0% | |
| GAGTGGGAAAAATAAGAACC+CGG | + | chr7_1:80539907-80539926 | None:intergenic | 40.0% | |
| TATAGATTGGAGCAGTGAGT+GGG | + | chr7_1:80539923-80539942 | None:intergenic | 40.0% | |
| TTATAGATTGGAGCAGTGAG+TGG | + | chr7_1:80539924-80539943 | None:intergenic | 40.0% | |
| TTTCACACAATCATGGCTTC+CGG | - | chr7_1:80539975-80539994 | Msa1042580:three_prime_UTR | 40.0% | |
| ACCCCAGAATAACAATGTCA+TGG | - | chr7_1:80540247-80540266 | Msa1042580:CDS | 40.0% | |
| ! | CCACCATGACATTGTTATTC+TGG | + | chr7_1:80540253-80540272 | None:intergenic | 40.0% |
| CCAGAATAACAATGTCATGG+TGG | - | chr7_1:80540250-80540269 | Msa1042580:CDS | 40.0% | |
| !! | CTTGTGTTGAGGCTAGTTTA+CGG | - | chr7_1:80540283-80540302 | Msa1042580:CDS | 40.0% |
| !! | TTGTGTTGAGGCTAGTTTAC+GGG | - | chr7_1:80540284-80540303 | Msa1042580:CDS | 40.0% |
| ! | ACGTTCCTGTGGATTTTATG+AGG | - | chr7_1:80540390-80540409 | Msa1042580:intron | 40.0% |
| ! | TTCTTATATTTGGGACCGGA+AGG | - | chr7_1:80540733-80540752 | Msa1042580:intron | 40.0% |
| TTGCCCTGTTTATCCAAACA+TGG | - | chr7_1:80540792-80540811 | Msa1042580:CDS | 40.0% | |
| CTAGATACCCAGTTATGCAA+AGG | + | chr7_1:80540867-80540886 | None:intergenic | 40.0% | |
| GCATAACTGGGTATCTAGTT+CGG | - | chr7_1:80540869-80540888 | Msa1042580:CDS | 40.0% | |
| GTACACTAACAAGTGTCCTA+AGG | + | chr7_1:80541064-80541083 | None:intergenic | 40.0% | |
| ! | ACACTTGTTAGTGTACTCGA+TGG | - | chr7_1:80541068-80541087 | Msa1042580:CDS | 40.0% |
| GACATTATGACTTCGAGGTT+TGG | - | chr7_1:80541151-80541170 | Msa1042580:intron | 40.0% | |
| ! | TATGACTTCGAGGTTTGGTT+TGG | - | chr7_1:80541156-80541175 | Msa1042580:intron | 40.0% |
| TTCTGTAGATGCTGATATGG+AGG | - | chr7_1:80541253-80541272 | Msa1042580:CDS | 40.0% | |
| TTGGTTGAAACTGATCCAGA+AGG | - | chr7_1:80541761-80541780 | Msa1042580:CDS | 40.0% | |
| ATGAGTGAGAAACAAGGGAA+GGG | + | chr7_1:80542080-80542099 | None:intergenic | 40.0% | |
| TATGAGTGAGAAACAAGGGA+AGG | + | chr7_1:80542081-80542100 | None:intergenic | 40.0% | |
| CTTATTCATGTACTGCACCA+TGG | - | chr7_1:80542103-80542122 | Msa1042580:intron | 40.0% | |
| ! | AGCATTATGGACTATGTCTC+TGG | - | chr7_1:80542341-80542360 | Msa1042580:intron | 40.0% |
| ! | TATGGACTATGTCTCTGGTT+CGG | - | chr7_1:80542346-80542365 | Msa1042580:intron | 40.0% |
| TTTGGTAGAATTCCTGCAGA+AGG | + | chr7_1:80542388-80542407 | None:intergenic | 40.0% | |
| !!! | CCTCATTTTTTGCCTCTTCA+AGG | + | chr7_1:80542424-80542443 | None:intergenic | 40.0% |
| CCTTGAAGAGGCAAAAAATG+AGG | - | chr7_1:80542421-80542440 | Msa1042580:intron | 40.0% | |
| CAATAATAGGAGAAACGGTG+AGG | + | chr7_1:80542472-80542491 | None:intergenic | 40.0% | |
| CACCGTTTCTCCTATTATTG+TGG | - | chr7_1:80542472-80542491 | Msa1042580:intron | 40.0% | |
| CACAATCTCTGCAAAATGAG+AGG | + | chr7_1:80542516-80542535 | None:intergenic | 40.0% | |
| ! | CTCTCATTTTGCAGAGATTG+TGG | - | chr7_1:80542514-80542533 | Msa1042580:intron | 40.0% |
| TTGACATTGGGGAATATGGT+CGG | - | chr7_1:80542571-80542590 | Msa1042580:intron | 40.0% | |
| ! | GAAAGGAACTCAACTTTTGG+AGG | - | chr7_1:80542793-80542812 | Msa1042580:intron | 40.0% |
| TCTAGGCAATCATGTGAATC+GGG | - | chr7_1:80543202-80543221 | Msa1042580:intron | 40.0% | |
| ! | TTATCTACGTTTTCCGATCC+TGG | - | chr7_1:80543674-80543693 | Msa1042580:CDS | 40.0% |
| CTGGAGTATATCGAATATCC+AGG | + | chr7_1:80543695-80543714 | None:intergenic | 40.0% | |
| TTCGATATACTCCAGCATCA+AGG | - | chr7_1:80543700-80543719 | Msa1042580:CDS | 40.0% | |
| TCGATATACTCCAGCATCAA+GGG | - | chr7_1:80543701-80543720 | Msa1042580:CDS | 40.0% | |
| AAAATCGTACGATCCAGAGT+TGG | - | chr7_1:80543735-80543754 | Msa1042580:intron | 40.0% | |
| !!! | GCGATTTTGACTACCATGAT+TGG | - | chr7_1:80543761-80543780 | Msa1042580:intron | 40.0% |
| ATTTGATCCCAAAACACACC+AGG | - | chr7_1:80543883-80543902 | Msa1042580:CDS | 40.0% | |
| ! | ATATGAGCCTGGTGTGTTTT+GGG | + | chr7_1:80543893-80543912 | None:intergenic | 40.0% |
| ! | AATATGAGCCTGGTGTGTTT+TGG | + | chr7_1:80543894-80543913 | None:intergenic | 40.0% |
| TCATGTGAAAACAAGATGGC+TGG | - | chr7_1:80543915-80543934 | Msa1042580:intron | 40.0% | |
| !! | GGTCGATTTGTCTTATGCTT+AGG | - | chr7_1:80543986-80544005 | Msa1042580:intron | 40.0% |
| CTTGTTTCCTTAACTAGGAC+GGG | - | chr7_1:80544406-80544425 | Msa1042580:intron | 40.0% | |
| ATTGAGAAAGGGAGAGGAAA+CGG | + | chr7_1:80544515-80544534 | None:intergenic | 40.0% | |
| GTATGAATTGAGAAAGGGAG+AGG | + | chr7_1:80544521-80544540 | None:intergenic | 40.0% | |
| AATTCCCCATCCAAGGATAA+TGG | - | chr7_1:80544612-80544631 | Msa1042580:intron | 40.0% | |
| ATTCCCCATCCAAGGATAAT+GGG | - | chr7_1:80544613-80544632 | Msa1042580:intron | 40.0% | |
| TATCCCCATTATCCTTGGAT+GGG | + | chr7_1:80544620-80544639 | None:intergenic | 40.0% | |
| TTATCCCCATTATCCTTGGA+TGG | + | chr7_1:80544621-80544640 | None:intergenic | 40.0% | |
| TGGATTATCCCCATTATCCT+TGG | + | chr7_1:80544625-80544644 | None:intergenic | 40.0% | |
| ATGGGGATAATCCATGAATG+TGG | - | chr7_1:80544631-80544650 | Msa1042580:CDS | 40.0% | |
| TGGGGATAATCCATGAATGT+GGG | - | chr7_1:80544632-80544651 | Msa1042580:CDS | 40.0% | |
| ! | AGTAAATCCATTTGATGGGC+AGG | - | chr7_1:80545201-80545220 | Msa1042580:intron | 40.0% |
| GAAACCATCCTCAACTTAGA+AGG | + | chr7_1:80545302-80545321 | None:intergenic | 40.0% | |
| TGATGGTTCTTCTGTTACTC+TGG | + | chr7_1:80545569-80545588 | None:intergenic | 40.0% | |
| GAGTAACAGAAGAACCATCA+TGG | - | chr7_1:80545569-80545588 | Msa1042580:intron | 40.0% | |
| ! | ACTAATTCGTTTGTTGGGCT+GGG | + | chr7_1:80545753-80545772 | None:intergenic | 40.0% |
| ATAACCCTTAAACCAGAGAC+TGG | + | chr7_1:80545855-80545874 | None:intergenic | 40.0% | |
| ! | AGTCTCTGGTTTAAGGGTTA+TGG | - | chr7_1:80545854-80545873 | Msa1042580:intron | 40.0% |
| AGGTAACTAGGATAGGAAAG+GGG | + | chr7_1:80545973-80545992 | None:intergenic | 40.0% | |
| GAAGGTAACTAGGATAGGAA+AGG | + | chr7_1:80545975-80545994 | None:intergenic | 40.0% | |
| CGTTAGAAGGTAACTAGGAT+AGG | + | chr7_1:80545980-80545999 | None:intergenic | 40.0% | |
| TCCTAGTTACCTTCTAACGA+TGG | - | chr7_1:80545981-80546000 | Msa1042580:intron | 40.0% | |
| ACCATCGTTAGAAGGTAACT+AGG | + | chr7_1:80545985-80546004 | None:intergenic | 40.0% | |
| AGTTACCTTCTAACGATGGT+TGG | - | chr7_1:80545985-80546004 | Msa1042580:intron | 40.0% | |
| TCAATCCAACCATCGTTAGA+AGG | + | chr7_1:80545993-80546012 | None:intergenic | 40.0% | |
| GACACATTGATCAAGTGAAC+CGG | - | chr7_1:80546178-80546197 | Msa1042580:intron | 40.0% | |
| CAAACCATCAACAACAGAGT+TGG | - | chr7_1:80546375-80546394 | Msa1042580:intron | 40.0% | |
| GTTGGTTAAACCATACTGTC+TGG | - | chr7_1:80546393-80546412 | Msa1042580:intron | 40.0% | |
| CAAGACAAAACTGCAAGTCA+GGG | + | chr7_1:80546442-80546461 | None:intergenic | 40.0% | |
| ACAAGACAAAACTGCAAGTC+AGG | + | chr7_1:80546443-80546462 | None:intergenic | 40.0% | |
| ATTGTAGGCTGTATGGAGTT+AGG | - | chr7_1:80546473-80546492 | Msa1042580:exon | 40.0% | |
| TTGTAGGCTGTATGGAGTTA+GGG | - | chr7_1:80546474-80546493 | Msa1042580:exon | 40.0% | |
| AATGGGAAAGGAAATAGCGG+AGG | + | chr7_1:80539869-80539888 | None:intergenic | 45.0% | |
| GGAAAAATAAGAACCCGGTG+AGG | + | chr7_1:80539902-80539921 | None:intergenic | 45.0% | |
| GAGTTAGAGGATCCGAGTTA+GGG | + | chr7_1:80539949-80539968 | None:intergenic | 45.0% | |
| TGAGTTAGAGGATCCGAGTT+AGG | + | chr7_1:80539950-80539969 | None:intergenic | 45.0% | |
| ATGCCTAAGTACGAACACCT+AGG | - | chr7_1:80540461-80540480 | Msa1042580:intron | 45.0% | |
| TGCCTAAGTACGAACACCTA+GGG | - | chr7_1:80540462-80540481 | Msa1042580:intron | 45.0% | |
| GGGCCATGTTTGGATAAACA+GGG | + | chr7_1:80540798-80540817 | None:intergenic | 45.0% | |
| AGGGCCATGTTTGGATAAAC+AGG | + | chr7_1:80540799-80540818 | None:intergenic | 45.0% | |
| ! | TGGGTATCTAGTTCGGATAG+CGG | - | chr7_1:80540876-80540895 | Msa1042580:intron | 45.0% |
| GATGCTGATATGGAGGACTA+TGG | - | chr7_1:80541260-80541279 | Msa1042580:CDS | 45.0% | |
| TGGATTTGAGTACTCTGACG+AGG | - | chr7_1:80541280-80541299 | Msa1042580:intron | 45.0% | |
| TGTGGTTCAACTTCAAGGCT+TGG | - | chr7_1:80541681-80541700 | Msa1042580:intron | 45.0% | |
| ! | AAACCAGAAAGTGCACCTTC+TGG | + | chr7_1:80541779-80541798 | None:intergenic | 45.0% |
| TTGTTCCATTCGCACTACCT+CGG | + | chr7_1:80541804-80541823 | None:intergenic | 45.0% | |
| AGTGCGAATGGAACAAGACA+AGG | - | chr7_1:80541808-80541827 | Msa1042580:CDS | 45.0% | |
| TGGAACAAGACAAGGCAGAA+TGG | - | chr7_1:80541816-80541835 | Msa1042580:CDS | 45.0% | |
| !! | CTTCAGAGCTTTAAATCCCC+TGG | + | chr7_1:80542201-80542220 | None:intergenic | 45.0% |
| !! | AAGAGATGATGGAAGCCTAC+AGG | - | chr7_1:80542258-80542277 | Msa1042580:intron | 45.0% |
| !! | AGAGATGATGGAAGCCTACA+GGG | - | chr7_1:80542259-80542278 | Msa1042580:intron | 45.0% |
| GTATGTCAACATCTCCCTGT+AGG | + | chr7_1:80542276-80542295 | None:intergenic | 45.0% | |
| TAATAGGAGAAACGGTGAGG+CGG | + | chr7_1:80542469-80542488 | None:intergenic | 45.0% | |
| GGAATATGGTCGGATGAGTA+AGG | - | chr7_1:80542581-80542600 | Msa1042580:intron | 45.0% | |
| TCACAGATCTTGTCAACGTG+AGG | - | chr7_1:80542751-80542770 | Msa1042580:intron | 45.0% | |
| AGATCTTGTCAACGTGAGGA+TGG | - | chr7_1:80542755-80542774 | Msa1042580:intron | 45.0% | |
| GGCACAGATGACCATAAGAA+AGG | - | chr7_1:80542776-80542795 | Msa1042580:intron | 45.0% | |
| ATGTGAATCGGGATCGAACA+CGG | - | chr7_1:80543213-80543232 | Msa1042580:intron | 45.0% | |
| TCAAAATCGCGATCCAACTC+TGG | + | chr7_1:80543751-80543770 | None:intergenic | 45.0% | |
| TTCCCCATCCAAGGATAATG+GGG | - | chr7_1:80544614-80544633 | Msa1042580:intron | 45.0% | |
| ATCCCCATTATCCTTGGATG+GGG | + | chr7_1:80544619-80544638 | None:intergenic | 45.0% | |
| GGGGATAATCCATGAATGTG+GGG | - | chr7_1:80544633-80544652 | Msa1042580:CDS | 45.0% | |
| GGGATAATCCATGAATGTGG+GGG | - | chr7_1:80544634-80544653 | Msa1042580:CDS | 45.0% | |
| GGATAATCCATGAATGTGGG+GGG | - | chr7_1:80544635-80544654 | Msa1042580:CDS | 45.0% | |
| ATGATGAAGCTGGGAATCAG+AGG | - | chr7_1:80544725-80544744 | Msa1042580:intron | 45.0% | |
| GCGTTGCTTACTTCAAGCAT+TGG | + | chr7_1:80544756-80544775 | None:intergenic | 45.0% | |
| ! | AAATCCATTTGATGGGCAGG+AGG | - | chr7_1:80545204-80545223 | Msa1042580:intron | 45.0% |
| AACTTAGAAGGGCTGGATCA+AGG | + | chr7_1:80545290-80545309 | None:intergenic | 45.0% | |
| GGGATCCTGATCCTTGTATA+TGG | + | chr7_1:80545672-80545691 | None:intergenic | 45.0% | |
| ! | CTAATTCGTTTGTTGGGCTG+GGG | + | chr7_1:80545752-80545771 | None:intergenic | 45.0% |
| ! | CACTAATTCGTTTGTTGGGC+TGG | + | chr7_1:80545754-80545773 | None:intergenic | 45.0% |
| CAGCCCAACAAACGAATTAG+TGG | - | chr7_1:80545752-80545771 | Msa1042580:intron | 45.0% | |
| ! | TCCTACCAGTCTCTGGTTTA+AGG | - | chr7_1:80545847-80545866 | Msa1042580:intron | 45.0% |
| ! | CCTACCAGTCTCTGGTTTAA+GGG | - | chr7_1:80545848-80545867 | Msa1042580:intron | 45.0% |
| TTCTATTCACGATGAGCAGC+AGG | + | chr7_1:80545895-80545914 | None:intergenic | 45.0% | |
| !!! | GCTACTCGTGTCGCTTATTT+TGG | - | chr7_1:80546140-80546159 | Msa1042580:intron | 45.0% |
| TGTAGGCTGTATGGAGTTAG+GGG | - | chr7_1:80546475-80546494 | Msa1042580:five_prime_UTR | 45.0% | |
| !! | AAAAAAAAATTTCTTATATT+TGG | - | chr7_1:80540723-80540742 | Msa1042580:intron | 5.0% |
| !! | AAAAAAAATTTCTTATATTT+GGG | - | chr7_1:80540724-80540743 | Msa1042580:intron | 5.0% |
| ACGGTGATGTGTTTGCGCTT+AGG | + | chr7_1:80539837-80539856 | None:intergenic | 50.0% | |
| GGGAGTGAAGAGAATGGGAA+AGG | + | chr7_1:80539881-80539900 | None:intergenic | 50.0% | |
| GGTGAGGGAGTGAAGAGAAT+GGG | + | chr7_1:80539886-80539905 | None:intergenic | 50.0% | |
| CATTCTCTTCACTCCCTCAC+CGG | - | chr7_1:80539885-80539904 | Msa1042580:three_prime_UTR | 50.0% | |
| ATTCTCTTCACTCCCTCACC+GGG | - | chr7_1:80539886-80539905 | Msa1042580:three_prime_UTR | 50.0% | |
| TGCCCTAGGTGTTCGTACTT+AGG | + | chr7_1:80540467-80540486 | None:intergenic | 50.0% | |
| ACGAACACCTAGGGCATGTT+TGG | - | chr7_1:80540471-80540490 | Msa1042580:intron | 50.0% | |
| CGTCAATCCAAACATGCCCT+AGG | + | chr7_1:80540481-80540500 | None:intergenic | 50.0% | |
| GGTGTGTATGGGAATGTGTG+CGG | + | chr7_1:80540939-80540958 | None:intergenic | 50.0% | |
| GTACTCTGACGAGGAACAAG+AGG | - | chr7_1:80541289-80541308 | Msa1042580:intron | 50.0% | |
| ! | GATCCAGAAGGTGCACTTTC+TGG | - | chr7_1:80541773-80541792 | Msa1042580:CDS | 50.0% |
| !!! | TGCACTTTCTGGTTTTGCCG+AGG | - | chr7_1:80541784-80541803 | Msa1042580:CDS | 50.0% |
| ! | TTTTGCCGAGGTAGTGCGAA+TGG | - | chr7_1:80541796-80541815 | Msa1042580:CDS | 50.0% |
| !! | GGTTCGGCTAGCCAGAATTT+TGG | - | chr7_1:80542362-80542381 | Msa1042580:intron | 50.0% |
| CCTGCAGAAGGCCAAAATTC+TGG | + | chr7_1:80542376-80542395 | None:intergenic | 50.0% | |
| !! | CCAGAATTTTGGCCTTCTGC+AGG | - | chr7_1:80542373-80542392 | Msa1042580:intron | 50.0% |
| CAAGGGCTCTCAGAGTTGTT+TGG | + | chr7_1:80542406-80542425 | None:intergenic | 50.0% | |
| ! | AACTCTGAGAGCCCTTGAAG+AGG | - | chr7_1:80542409-80542428 | Msa1042580:intron | 50.0% |
| GATCTTGTTGCCCTTGATGC+TGG | + | chr7_1:80543714-80543733 | None:intergenic | 50.0% | |
| CTAGACTCCCGTCCTAGTTA+AGG | + | chr7_1:80544416-80544435 | None:intergenic | 50.0% | |
| AGTCAGCAATTCCCCATCCA+AGG | - | chr7_1:80544605-80544624 | Msa1042580:intron | 50.0% | |
| ! | GCATTTTCCCCCCACATTCA+TGG | + | chr7_1:80544645-80544664 | None:intergenic | 50.0% |
| ATGTGGGGGGAAAATGCACA+TGG | - | chr7_1:80544648-80544667 | Msa1042580:CDS | 50.0% | |
| TTAGCCTCCTGCCCATCAAA+TGG | + | chr7_1:80545211-80545230 | None:intergenic | 50.0% | |
| GAAGGGCTGGATCAAGGAAT+GGG | + | chr7_1:80545284-80545303 | None:intergenic | 50.0% | |
| AGAAGGGCTGGATCAAGGAA+TGG | + | chr7_1:80545285-80545304 | None:intergenic | 50.0% | |
| GATCCAGCCCTTCTAAGTTG+AGG | - | chr7_1:80545291-80545310 | Msa1042580:intron | 50.0% | |
| CATCCTCAACTTAGAAGGGC+TGG | + | chr7_1:80545297-80545316 | None:intergenic | 50.0% | |
| ! | CAGCCCTTCTAAGTTGAGGA+TGG | - | chr7_1:80545295-80545314 | Msa1042580:intron | 50.0% |
| CAGCTATTCCTACCAGTCTC+TGG | - | chr7_1:80545840-80545859 | Msa1042580:intron | 50.0% | |
| CCCTTAAACCAGAGACTGGT+AGG | + | chr7_1:80545851-80545870 | None:intergenic | 50.0% | |
| AGCTGCTCAACATCATGCTC+AGG | + | chr7_1:80546123-80546142 | None:intergenic | 50.0% | |
| ! | TGATCAAGTGAACCGGCTCT+TGG | - | chr7_1:80546185-80546204 | Msa1042580:intron | 50.0% |
| ! | TATCAGAGCGTTCCAAGAGC+CGG | + | chr7_1:80546200-80546219 | None:intergenic | 50.0% |
| GTAGGCTGTATGGAGTTAGG+GGG | - | chr7_1:80546476-80546495 | Msa1042580:five_prime_UTR | 50.0% | |
| CGGTGAGGGAGTGAAGAGAA+TGG | + | chr7_1:80539887-80539906 | None:intergenic | 55.0% | |
| ! | TCGGATAGCGGTCAAGAGTG+TGG | - | chr7_1:80540888-80540907 | Msa1042580:intron | 55.0% |
| TGACGAGGAACAAGAGGAGC+AGG | - | chr7_1:80541295-80541314 | Msa1042580:intron | 55.0% | |
| GGCTCTTGGAACGCTCTGAT+AGG | - | chr7_1:80546199-80546218 | Msa1042580:intron | 55.0% | |
| ! | CGTTTGTTGGGCTGGGGCAA+GGG | + | chr7_1:80545746-80545765 | None:intergenic | 60.0% |
| ! | TCGTTTGTTGGGCTGGGGCA+AGG | + | chr7_1:80545747-80545766 | None:intergenic | 60.0% |
| ! | TGCACATGGCAGAGCGCCAG+TGG | - | chr7_1:80544662-80544681 | Msa1042580:CDS | 65.0% |
| ! | GCACATGGCAGAGCGCCAGT+GGG | - | chr7_1:80544663-80544682 | Msa1042580:CDS | 65.0% |
| CTGTAGCTGCGTCAGCCCAC+TGG | + | chr7_1:80544681-80544700 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 80539823 | 80546638 | 80539823 | ID=Msa1042580;Name=Msa1042580 |
| chr7_1 | mRNA | 80539823 | 80546638 | 80539823 | ID=Msa1042580-mRNA-1;Parent=Msa1042580;Name=Msa1042580-mRNA-1;_AED=0.08;_eAED=0.08;_QI=164|1|1|1|1|1|12|237|439 |
| chr7_1 | exon | 80539823 | 80540150 | 80539823 | ID=Msa1042580-mRNA-1:exon:22016;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80540241 | 80540353 | 80540241 | ID=Msa1042580-mRNA-1:exon:22015;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80540757 | 80540891 | 80540757 | ID=Msa1042580-mRNA-1:exon:22014;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80541006 | 80541096 | 80541006 | ID=Msa1042580-mRNA-1:exon:22013;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80541228 | 80541296 | 80541228 | ID=Msa1042580-mRNA-1:exon:22012;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80541697 | 80541884 | 80541697 | ID=Msa1042580-mRNA-1:exon:22011;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80543590 | 80543724 | 80543590 | ID=Msa1042580-mRNA-1:exon:22010;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80543859 | 80543933 | 80543859 | ID=Msa1042580-mRNA-1:exon:22009;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80544019 | 80544259 | 80544019 | ID=Msa1042580-mRNA-1:exon:22008;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80544624 | 80544702 | 80544624 | ID=Msa1042580-mRNA-1:exon:22007;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80545108 | 80545200 | 80545108 | ID=Msa1042580-mRNA-1:exon:22006;Parent=Msa1042580-mRNA-1 |
| chr7_1 | exon | 80546465 | 80546638 | 80546465 | ID=Msa1042580-mRNA-1:exon:22005;Parent=Msa1042580-mRNA-1 |
| chr7_1 | five_prime_UTR | 80546475 | 80546638 | 80546475 | ID=Msa1042580-mRNA-1:five_prime_utr;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80546465 | 80546474 | 80546465 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80545108 | 80545200 | 80545108 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80544624 | 80544702 | 80544624 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80544019 | 80544259 | 80544019 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80543859 | 80543933 | 80543859 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80543590 | 80543724 | 80543590 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80541697 | 80541884 | 80541697 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80541228 | 80541296 | 80541228 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80541006 | 80541096 | 80541006 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80540757 | 80540891 | 80540757 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80540241 | 80540353 | 80540241 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | CDS | 80540060 | 80540150 | 80540060 | ID=Msa1042580-mRNA-1:cds;Parent=Msa1042580-mRNA-1 |
| chr7_1 | three_prime_UTR | 80539823 | 80540059 | 80539823 | ID=Msa1042580-mRNA-1:three_prime_utr;Parent=Msa1042580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
