Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230670 | XP_003592706.1 | 100.000 | 606 | 0 | 0 | 1 | 606 | 1 | 606 | 0.0 | 1253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230670 | sp|Q8LPJ4|AB2E_ARATH | 91.254 | 606 | 52 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230670 | G7IE72 | 100.000 | 606 | 0 | 0 | 1 | 606 | 1 | 606 | 0.0 | 1253 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0183040 | Msa0230670 | 0.903071 | 5.064947e-79 | -8.615850e-47 |
| Msa0230670 | Msa0486140 | 0.971185 | 9.097506e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230670 | MtrunA17_Chr1g0211721 | 100.000 | 606 | 0 | 0 | 1 | 606 | 1 | 606 | 0.0 | 1253 |
| Msa0230670 | MtrunA17_Chr1g0156551 | 96.046 | 607 | 23 | 1 | 1 | 606 | 77 | 683 | 0.0 | 1210 |
| Msa0230670 | MtrunA17_Chr4g0002101 | 87.043 | 602 | 76 | 2 | 5 | 606 | 1 | 600 | 0.0 | 1081 |
| Msa0230670 | MtrunA17_Chr1g0156441 | 88.980 | 245 | 24 | 1 | 323 | 567 | 11 | 252 | 1.81e-158 | 454 |
| Msa0230670 | MtrunA17_Chr1g0156441 | 29.461 | 241 | 118 | 6 | 103 | 326 | 59 | 264 | 1.04e-24 | 103 |
| Msa0230670 | MtrunA17_Chr1g0156461 | 77.833 | 203 | 43 | 2 | 1 | 202 | 1 | 202 | 5.67e-110 | 328 |
| Msa0230670 | MtrunA17_Chr1g0156451 | 57.292 | 96 | 2 | 1 | 239 | 334 | 1 | 57 | 1.67e-24 | 96.7 |
| Msa0230670 | MtrunA17_Chr3g0129301 | 29.586 | 169 | 104 | 5 | 377 | 540 | 461 | 619 | 4.16e-11 | 65.9 |
| Msa0230670 | MtrunA17_Chr3g0130211 | 27.869 | 183 | 119 | 6 | 375 | 547 | 67 | 246 | 9.37e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230670 | AT4G19210.1 | 91.254 | 606 | 52 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1153 |
| Msa0230670 | AT3G13640.1 | 78.218 | 606 | 129 | 1 | 1 | 606 | 1 | 603 | 0.0 | 1000 |
| Msa0230670 | AT4G30300.1 | 66.477 | 176 | 56 | 3 | 355 | 528 | 1 | 175 | 2.24e-70 | 225 |
| Msa0230670 | AT4G30300.1 | 29.375 | 160 | 95 | 3 | 104 | 263 | 21 | 162 | 1.64e-12 | 66.6 |
| Msa0230670 | AT4G33460.1 | 31.481 | 162 | 98 | 6 | 374 | 527 | 70 | 226 | 3.91e-11 | 64.7 |
Find 173 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCGGCAAGTTGATAATT+TGG | 0.141900 | 2_2:+2840370 | None:intergenic |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 2_2:-2839142 | Msa0230670:CDS |
| AGAGGGATGGAAAGGAATTT+AGG | 0.182612 | 2_2:+2840950 | None:intergenic |
| CAAGAGGTTCAGAATCTTTC+TGG | 0.182659 | 2_2:-2837184 | Msa0230670:CDS |
| ACATGTATATCTCAGCATTT+TGG | 0.193506 | 2_2:+2839080 | None:intergenic |
| CCAAAACTCAAGGCAATTTC+AGG | 0.203901 | 2_2:-2837584 | Msa0230670:CDS |
| GCAATTCAGATCCTCGAAAA+TGG | 0.208418 | 2_2:+2839965 | None:intergenic |
| GACTTTATTTGCTGTTTATA+TGG | 0.218246 | 2_2:-2838808 | Msa0230670:CDS |
| GCAAGTGTCTAACAGATAAT+TGG | 0.222574 | 2_2:+2837293 | None:intergenic |
| ACATTCCCTTGCACAGCTTT+TGG | 0.248703 | 2_2:+2839247 | None:intergenic |
| CCTGAAATTGCCTTGAGTTT+TGG | 0.257880 | 2_2:+2837584 | None:intergenic |
| CGAGCACGATCTTAGTGTTT+TGG | 0.269250 | 2_2:-2838842 | Msa0230670:CDS |
| TATCAACTTGCCGAAGGATT+TGG | 0.275167 | 2_2:-2840364 | Msa0230670:CDS |
| TGATGAACCTTCCAGTTATC+TGG | 0.286678 | 2_2:-2839056 | Msa0230670:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 2_2:-2838711 | Msa0230670:CDS |
| GAATGGGTCGTTTGAGGAAA+TGG | 0.290577 | 2_2:+2840897 | None:intergenic |
| GTCGACTGCACTTAAGGTTT+TGG | 0.295828 | 2_2:-2840143 | Msa0230670:CDS |
| TTTGAGGAAATGGGAGAGTT+GGG | 0.304723 | 2_2:+2840907 | None:intergenic |
| CAACAGAAAATCTTAGGTTT+CGG | 0.312251 | 2_2:-2838705 | Msa0230670:CDS |
| GAGGGATGGAAAGGAATTTA+GGG | 0.315570 | 2_2:+2840951 | None:intergenic |
| TCATCACATCTGATATAAAC+TGG | 0.317044 | 2_2:+2837236 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.326990 | 2_2:-2838704 | Msa0230670:CDS |
| ACCAAGCACTTGCCCCGGCC+TGG | 0.332750 | 2_2:+2840192 | None:intergenic |
| TAATTATAATTGCAGGTTGC+CGG | 0.348977 | 2_2:-2840218 | Msa0230670:intron |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.350689 | 2_2:+2840315 | None:intergenic |
| GGGCAAGTGCTTGGTTTGGT+TGG | 0.352472 | 2_2:-2840184 | Msa0230670:CDS |
| CCCAGGCCGGGGCAAGTGCT+TGG | 0.354601 | 2_2:-2840193 | Msa0230670:CDS |
| GGCAAGTGCTTGGTTTGGTT+GGG | 0.358646 | 2_2:-2840183 | Msa0230670:CDS |
| GAAATCGTGCTCAACGATAA+AGG | 0.366245 | 2_2:+2836336 | None:intergenic |
| GGAGGTTTCTCTTACTTTCA+AGG | 0.366509 | 2_2:-2838683 | Msa0230670:intron |
| ACTACTTATTGAACAGTTGA+TGG | 0.367488 | 2_2:-2837209 | Msa0230670:CDS |
| GTCAAAATTTCCTGCCAATC+AGG | 0.370858 | 2_2:+2839988 | None:intergenic |
| CTGTTTCACATCCAGATAAC+TGG | 0.373313 | 2_2:+2839045 | None:intergenic |
| TGGGAAGTCGACTGCACTTA+AGG | 0.380143 | 2_2:-2840149 | Msa0230670:CDS |
| CAGGTTGCCGGTTCCCAGGC+CGG | 0.381117 | 2_2:-2840206 | Msa0230670:CDS |
| TTGGTTGGGACAAATGGAAT+TGG | 0.383851 | 2_2:-2840169 | Msa0230670:CDS |
| CTTGGTTTGGTTGGGACAAA+TGG | 0.384149 | 2_2:-2840175 | Msa0230670:CDS |
| ATTAATACTTGGATTTATAT+CGG | 0.384448 | 2_2:-2835563 | Msa0230670:three_prime_UTR |
| GCCGGGGCAAGTGCTTGGTT+TGG | 0.387478 | 2_2:-2840188 | Msa0230670:CDS |
| GGAAATTAAACAAACCTATT+GGG | 0.388964 | 2_2:+2838983 | None:intergenic |
| AGGTTGCCGGTTCCCAGGCC+GGG | 0.393335 | 2_2:-2840205 | Msa0230670:CDS |
| ACTTGCCCCGGCCTGGGAAC+CGG | 0.394610 | 2_2:+2840199 | None:intergenic |
| TAACAGATAATTGGGACTTT+GGG | 0.395339 | 2_2:+2837302 | None:intergenic |
| TGGTTGGGACAAATGGAATT+GGG | 0.399770 | 2_2:-2840168 | Msa0230670:CDS |
| GATTCAAGTTTGTTGATCCT+TGG | 0.400390 | 2_2:+2836012 | None:intergenic |
| ATTCAAGTTTGTTGATCCTT+GGG | 0.401478 | 2_2:+2836013 | None:intergenic |
| TGCAGCAACAATACGCTGTT+CGG | 0.410104 | 2_2:+2836399 | None:intergenic |
| CAAACGACCCATTCTCTATT+CGG | 0.410737 | 2_2:-2840888 | Msa0230670:intron |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.412838 | 2_2:+2836027 | None:intergenic |
| CTAACAGATAATTGGGACTT+TGG | 0.418945 | 2_2:+2837301 | None:intergenic |
| CCATCAAAGCATAACAAAAC+TGG | 0.419865 | 2_2:+2835595 | None:intergenic |
| TGGAAAATTGAAGCCCAACT+TGG | 0.425877 | 2_2:-2840119 | Msa0230670:CDS |
| AATGGGTCGTTTGAGGAAAT+GGG | 0.427611 | 2_2:+2840898 | None:intergenic |
| CAAGTGTCTAACAGATAATT+GGG | 0.435174 | 2_2:+2837294 | None:intergenic |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 2_2:+2838754 | None:intergenic |
| GGTCATTGCTCAGGCCCAAT+AGG | 0.438087 | 2_2:-2838997 | Msa0230670:intron |
| GGAATTAATATCTTCTTGTC+CGG | 0.438408 | 2_2:-2838736 | Msa0230670:CDS |
| TGATGCCTTGCCATAAAAGT+TGG | 0.440033 | 2_2:-2835753 | Msa0230670:three_prime_UTR |
| TTGAAACCTGACACTATAGA+AGG | 0.440943 | 2_2:-2837382 | Msa0230670:CDS |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 2_2:-2839141 | Msa0230670:CDS |
| CATTCTAGAGGATGATTTGA+AGG | 0.442384 | 2_2:-2839926 | Msa0230670:intron |
| TCCTTGGGCGGAAATTAGTT+GGG | 0.449811 | 2_2:+2836028 | None:intergenic |
| TTCAGGCTTCATGTAGTTGA+AGG | 0.451867 | 2_2:-2837567 | Msa0230670:CDS |
| CAACCGCAATGGCAAACCTT+TGG | 0.455169 | 2_2:+2839110 | None:intergenic |
| GCAGGAACCGCCTGATTGGC+AGG | 0.457134 | 2_2:-2839998 | Msa0230670:intron |
| CGTTGAAATATGCCTTCAAC+GGG | 0.462172 | 2_2:+2835723 | None:intergenic |
| TACTGTGAAACGACCCAAGT+TGG | 0.462614 | 2_2:+2840105 | None:intergenic |
| TTCACAGATTATTGTGATGC+TGG | 0.464457 | 2_2:-2837532 | Msa0230670:CDS |
| AGTTGTCCTGTCGTCAGAAC+CGG | 0.468418 | 2_2:-2840674 | Msa0230670:intron |
| GATCCACCTTCTATAGTGTC+AGG | 0.471777 | 2_2:+2837376 | None:intergenic |
| CAATTCAGATCCTCGAAAAT+GGG | 0.471862 | 2_2:+2839966 | None:intergenic |
| ATATCTGAGGAATTGTGTAT+TGG | 0.475022 | 2_2:-2840525 | Msa0230670:CDS |
| GAGTATAAACTCAGTCATCT+AGG | 0.476908 | 2_2:+2835947 | None:intergenic |
| GTATCTTTGTCCAAATCCTT+CGG | 0.478826 | 2_2:+2840354 | None:intergenic |
| AAGTTGTTCGGTCATTGCTC+AGG | 0.479261 | 2_2:-2839006 | Msa0230670:CDS |
| GGTTGCCGGTTCCCAGGCCG+GGG | 0.481360 | 2_2:-2840204 | Msa0230670:CDS |
| TGAAAGCTGCCCAAGTTGTT+CGG | 0.481445 | 2_2:-2839018 | Msa0230670:CDS |
| GTTGCGTTATGCCTTTGTCT+TGG | 0.482528 | 2_2:-2837145 | Msa0230670:CDS |
| TGGATGCGGTATCTGTGTTA+AGG | 0.483465 | 2_2:-2840505 | Msa0230670:intron |
| TTTGCAGTACAGTCAATTGA+AGG | 0.484553 | 2_2:+2836265 | None:intergenic |
| ACTGTGAAACGACCCAAGTT+GGG | 0.485280 | 2_2:+2840106 | None:intergenic |
| CCAAGCACTTGCCCCGGCCT+GGG | 0.485916 | 2_2:+2840193 | None:intergenic |
| ATTTGCAGGAACCGCCTGAT+TGG | 0.486998 | 2_2:-2840002 | Msa0230670:intron |
| AGCATAAGTTTGAGCTTCCT+CGG | 0.496954 | 2_2:+2837629 | None:intergenic |
| TACTTACCGGTTCTGACGAC+AGG | 0.500661 | 2_2:+2840668 | None:intergenic |
| GTTTGAGGAAATGGGAGAGT+TGG | 0.501465 | 2_2:+2840906 | None:intergenic |
| ATAATTTGGATAGCTTCAAA+AGG | 0.502077 | 2_2:+2840384 | None:intergenic |
| CGTTGAGCACGATTTCATCA+TGG | 0.508016 | 2_2:-2836329 | Msa0230670:CDS |
| ATTGCAGGTTGCCGGTTCCC+AGG | 0.508516 | 2_2:-2840210 | Msa0230670:intron |
| TTGAGGAAATGGGAGAGTTG+GGG | 0.509571 | 2_2:+2840908 | None:intergenic |
| AATAGAGAATGGGTCGTTTG+AGG | 0.510816 | 2_2:+2840891 | None:intergenic |
| GACGACCTTCATTCGTATGC+TGG | 0.512536 | 2_2:-2837490 | Msa0230670:intron |
| CAGAAAGATTCTGAACCTCT+TGG | 0.512923 | 2_2:+2837185 | None:intergenic |
| ACTTGGATTTATATCGGTCA+TGG | 0.513895 | 2_2:-2835557 | None:intergenic |
| TGACACTTACAGATAAGAAA+AGG | 0.514344 | 2_2:+2836212 | None:intergenic |
| AGAGCTTACCGAATAGAGAA+TGG | 0.515912 | 2_2:+2840880 | None:intergenic |
| TGCTGTTTATATGGCAAACC+TGG | 0.517732 | 2_2:-2838799 | Msa0230670:CDS |
| ACCAAACCAAGCACTTGCCC+CGG | 0.520624 | 2_2:+2840187 | None:intergenic |
| TGTGCAAGGGAATGTGGGGC+AGG | 0.520706 | 2_2:-2839239 | Msa0230670:CDS |
| AGTGTCAGGTTTCAACAAAC+CGG | 0.521126 | 2_2:+2837390 | None:intergenic |
| CATCACATCTGATATAAACT+GGG | 0.522285 | 2_2:+2837237 | None:intergenic |
| TATGGCAAACCTGGTGCATA+TGG | 0.523361 | 2_2:-2838790 | Msa0230670:CDS |
| AAAAGCTGTGCAAGGGAATG+TGG | 0.523524 | 2_2:-2839245 | Msa0230670:CDS |
| GGAAAATTGAAGCCCAACTT+GGG | 0.525005 | 2_2:-2840118 | Msa0230670:CDS |
| TGAGCAATGACCGAACAACT+TGG | 0.525619 | 2_2:+2839008 | None:intergenic |
| TCTATCAGATAGATGTCTGC+AGG | 0.531946 | 2_2:+2836445 | None:intergenic |
| GACAGAGAGCAAAAGAATGC+TGG | 0.532220 | 2_2:-2835982 | Msa0230670:CDS |
| GAATACCAGCATACGAATGA+AGG | 0.534723 | 2_2:+2837485 | None:intergenic |
| TGTCCACAATCATTGCTGAC+TGG | 0.536125 | 2_2:-2836241 | Msa0230670:CDS |
| GCTCCAAAGGTTTGCCATTG+CGG | 0.537822 | 2_2:-2839113 | Msa0230670:CDS |
| GGGTGAATCTGATTAATACT+TGG | 0.538276 | 2_2:-2835574 | Msa0230670:three_prime_UTR |
| AATTTGATGCACTGTTGCAT+TGG | 0.538513 | 2_2:+2835810 | None:intergenic |
| TTTAGGGTTTGATATTTAGA+CGG | 0.539610 | 2_2:+2840967 | None:intergenic |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 2_2:-2839154 | Msa0230670:CDS |
| ATTGTGATGCTGGGTGAGAA+TGG | 0.542652 | 2_2:-2837522 | Msa0230670:CDS |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 2_2:-2838757 | Msa0230670:CDS |
| GATGACTGAGTTTATACTCA+AGG | 0.550664 | 2_2:-2835943 | Msa0230670:exon |
| TTGCTGCAAAAGTCATCAAG+AGG | 0.552612 | 2_2:-2836384 | Msa0230670:CDS |
| TGAAGAGTCTACATGTAGGC+AGG | 0.553342 | 2_2:-2835697 | Msa0230670:three_prime_UTR |
| GCTTCCTCGGCAGTTTCCTG+TGG | 0.555626 | 2_2:+2837642 | None:intergenic |
| CATGTAGGCAGGACATATGT+TGG | 0.556321 | 2_2:-2835686 | Msa0230670:three_prime_UTR |
| GTTATGCCTTTGTCTTGGAA+AGG | 0.557319 | 2_2:-2837140 | Msa0230670:intron |
| GAGCTTACCGAATAGAGAAT+GGG | 0.560217 | 2_2:+2840881 | None:intergenic |
| CACATTCCAAAAGCTGTGCA+AGG | 0.561951 | 2_2:-2839253 | Msa0230670:CDS |
| CCGTTGAAATATGCCTTCAA+CGG | 0.565263 | 2_2:+2835722 | None:intergenic |
| CCGTTGAAGGCATATTTCAA+CGG | 0.565319 | 2_2:-2835722 | Msa0230670:three_prime_UTR |
| GTCCACAATCATTGCTGACT+GGG | 0.565913 | 2_2:-2836240 | Msa0230670:CDS |
| TGAGGAAATGGGAGAGTTGG+GGG | 0.568494 | 2_2:+2840909 | None:intergenic |
| ATGAGAGAGACATGAAGGAA+AGG | 0.568976 | 2_2:-2839201 | Msa0230670:CDS |
| CCAAATTATCAACTTGCCGA+AGG | 0.569243 | 2_2:-2840370 | Msa0230670:CDS |
| TATAGGAAGATTATGTGTTG+AGG | 0.569885 | 2_2:-2840574 | Msa0230670:intron |
| TTGTATGATACGTTGAACTC+AGG | 0.573498 | 2_2:+2837340 | None:intergenic |
| AAAGCTGTGCAAGGGAATGT+GGG | 0.574699 | 2_2:-2839244 | Msa0230670:CDS |
| TTGTGATGCTGGGTGAGAAT+GGG | 0.580939 | 2_2:-2837521 | Msa0230670:CDS |
| ATCCCAGTCAGCAATGATTG+TGG | 0.583341 | 2_2:+2836238 | None:intergenic |
| TTGGATGGCAACAACCGCAA+TGG | 0.587256 | 2_2:+2839099 | None:intergenic |
| TTACTTCACTCGCATTCTAG+AGG | 0.589481 | 2_2:-2839938 | Msa0230670:CDS |
| GAGCAATGACCGAACAACTT+GGG | 0.591716 | 2_2:+2839009 | None:intergenic |
| AAAGATACCACTCATAGATA+CGG | 0.592191 | 2_2:-2840339 | Msa0230670:CDS |
| TCACAGATTATTGTGATGCT+GGG | 0.595178 | 2_2:-2837531 | Msa0230670:CDS |
| ACCCAACTAATTTCCGCCCA+AGG | 0.596535 | 2_2:-2836029 | Msa0230670:CDS |
| ATGCTGGGTGAGAATGGGAC+AGG | 0.597656 | 2_2:-2837516 | Msa0230670:CDS |
| AAAATACCTTTCCAAGACAA+AGG | 0.600861 | 2_2:+2837134 | None:intergenic |
| GAGGTTCAGAATCTTTCTGG+TGG | 0.606749 | 2_2:-2837181 | Msa0230670:CDS |
| ATCAACTGTTCAATAAGTAG+TGG | 0.606997 | 2_2:+2837211 | None:intergenic |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 2_2:+2836016 | None:intergenic |
| CTAGGTTGCAGAGACTCCAC+AGG | 0.612709 | 2_2:-2837658 | Msa0230670:intron |
| GCATCTGTCGTTGCTAACGA+TGG | 0.618479 | 2_2:+2840730 | None:intergenic |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 2_2:-2839140 | Msa0230670:CDS |
| GAAGATTGCTTACATATCTG+AGG | 0.618924 | 2_2:-2840538 | Msa0230670:CDS |
| TGAACAGTTGATGGACCAAG+AGG | 0.621724 | 2_2:-2837200 | Msa0230670:CDS |
| TCGGAATCAAGATATGCACT+TGG | 0.628638 | 2_2:+2836418 | None:intergenic |
| GATAGAGTTATTGTTTACGA+GGG | 0.628816 | 2_2:-2836292 | Msa0230670:CDS |
| GGAATGTGGTCAACATACTG+AGG | 0.630705 | 2_2:+2839268 | None:intergenic |
| AAACCTGACACTATAGAAGG+TGG | 0.635558 | 2_2:-2837379 | Msa0230670:CDS |
| AAAATTTCCTGCCAATCAGG+CGG | 0.635955 | 2_2:+2839991 | None:intergenic |
| CAACAAACTTGAATCAACAA+AGG | 0.636970 | 2_2:-2836004 | Msa0230670:CDS |
| TGATAGAGTTATTGTTTACG+AGG | 0.637216 | 2_2:-2836293 | Msa0230670:CDS |
| AGAAAATCTTAGGTTTCGGG+AGG | 0.637470 | 2_2:-2838701 | Msa0230670:CDS |
| ACATTCCAAAAGCTGTGCAA+GGG | 0.637987 | 2_2:-2839252 | Msa0230670:CDS |
| AAGCTGTGCAAGGGAATGTG+GGG | 0.647412 | 2_2:-2839243 | Msa0230670:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.648487 | 2_2:+2837238 | None:intergenic |
| CGTCGCAGTTGTCAACATGT+CGG | 0.652133 | 2_2:-2840771 | Msa0230670:intron |
| GTTACAACACCATATGCACC+AGG | 0.652585 | 2_2:+2838781 | None:intergenic |
| TTCACATCCAGATAACTGGA+AGG | 0.653511 | 2_2:+2839049 | None:intergenic |
| GAGGAATTGTGTATTGGATG+CGG | 0.654426 | 2_2:-2840519 | Msa0230670:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.657607 | 2_2:-2837594 | Msa0230670:CDS |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 2_2:-2839139 | Msa0230670:CDS |
| GACTCCACAGGAAACTGCCG+AGG | 0.659331 | 2_2:-2837646 | Msa0230670:CDS |
| ATTAGGACCGTATCTATGAG+TGG | 0.664710 | 2_2:+2840332 | None:intergenic |
| GGATTGAAGAGTCTACATGT+AGG | 0.687888 | 2_2:-2835701 | Msa0230670:three_prime_UTR |
| GTTATCTGGATGTGAAACAG+AGG | 0.693943 | 2_2:-2839042 | Msa0230670:CDS |
| TCACATCTGATATAAACTGG+GGG | 0.704498 | 2_2:+2837239 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTTAATTTAATTAT+AGG | - | chr2_2:2835982-2836001 | Msa0230670:CDS | 0.0% |
| !!! | TAATTTAATATTTATTTTAA+TGG | + | chr2_2:2838497-2838516 | None:intergenic | 0.0% |
| !!! | ATTAGAATATTTTTATTTCA+AGG | + | chr2_2:2838794-2838813 | None:intergenic | 10.0% |
| !! | TATTCTAATAAATTAGATAT+TGG | - | chr2_2:2838805-2838824 | Msa0230670:CDS | 10.0% |
| !! | AAAATGAAATCTGAAAAAAA+GGG | + | chr2_2:2835940-2835959 | None:intergenic | 15.0% |
| !! | TTCTTATATTCTATATTAGA+AGG | + | chr2_2:2836743-2836762 | None:intergenic | 15.0% |
| !! | ATGTCTTAAATTAAATCTTT+GGG | + | chr2_2:2836990-2837009 | None:intergenic | 15.0% |
| !! | AATGTCTTAAATTAAATCTT+TGG | + | chr2_2:2836991-2837010 | None:intergenic | 15.0% |
| !! | AAATCATATATAAATAGTGA+TGG | + | chr2_2:2837019-2837038 | None:intergenic | 15.0% |
| !!! | AATTTTAAAAAATGAAGGTA+CGG | - | chr2_2:2838102-2838121 | Msa0230670:intron | 15.0% |
| !! | TAACCAAATAAAAATAGATA+TGG | - | chr2_2:2838306-2838325 | Msa0230670:intron | 15.0% |
| !! | AAATAAAAATAGATATGGTT+CGG | - | chr2_2:2838311-2838330 | Msa0230670:intron | 15.0% |
| !! | CAAAAAAAAAAAAAATCTCA+AGG | + | chr2_2:2839474-2839493 | None:intergenic | 15.0% |
| !!! | TGAGATTTTTTTTTTTTTTG+AGG | - | chr2_2:2839474-2839493 | Msa0230670:intron | 15.0% |
| !!! | GAGATTTTTTTTTTTTTTGA+GGG | - | chr2_2:2839475-2839494 | Msa0230670:intron | 15.0% |
| !!! | AGATTTTTTTTTTTTTTGAG+GGG | - | chr2_2:2839476-2839495 | Msa0230670:intron | 15.0% |
| !! | GAAATAAAATGTATACATTT+AGG | + | chr2_2:2839901-2839920 | None:intergenic | 15.0% |
| !! | TCTTTCTGTTTAAAAAATTT+AGG | - | chr2_2:2840408-2840427 | Msa0230670:intron | 15.0% |
| !! | CTTTCTGTTTAAAAAATTTA+GGG | - | chr2_2:2840409-2840428 | Msa0230670:intron | 15.0% |
| !! | ATTAATACTTGGATTTATAT+CGG | - | chr2_2:2841010-2841029 | Msa0230670:five_prime_UTR | 15.0% |
| !! | GAAAATGAAATCTGAAAAAA+AGG | + | chr2_2:2835941-2835960 | None:intergenic | 20.0% |
| !! | ATATCTTTGAGTGTTAATAA+TGG | - | chr2_2:2836133-2836152 | Msa0230670:intron | 20.0% |
| !! | TATCTTTGAGTGTTAATAAT+GGG | - | chr2_2:2836134-2836153 | Msa0230670:intron | 20.0% |
| !! | GTAATTGTAATTATAATTGC+AGG | - | chr2_2:2836348-2836367 | Msa0230670:CDS | 20.0% |
| !!! | AACTAAAAAAAGGCTAATTT+TGG | + | chr2_2:2836498-2836517 | None:intergenic | 20.0% |
| !! | ACAATACAAATTTCAAAAAC+AGG | + | chr2_2:2837184-2837203 | None:intergenic | 20.0% |
| !! | ATTGAAATAAACATGATTAG+AGG | + | chr2_2:2837257-2837276 | None:intergenic | 20.0% |
| !! | TTCAATATACGTTATAATAC+AGG | - | chr2_2:2837271-2837290 | Msa0230670:CDS | 20.0% |
| !! | AAATATAAATGCAATTTGAG+TGG | - | chr2_2:2837947-2837966 | Msa0230670:intron | 20.0% |
| !! | AATATAAATGCAATTTGAGT+GGG | - | chr2_2:2837948-2837967 | Msa0230670:intron | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | - | chr2_2:2838097-2838116 | Msa0230670:intron | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+GGG | - | chr2_2:2838103-2838122 | Msa0230670:intron | 20.0% |
| !!! | GAACCATATCTATTTTTATT+TGG | + | chr2_2:2838312-2838331 | None:intergenic | 20.0% |
| !! | ATCAAAACTAAAGTGATTAT+GGG | + | chr2_2:2838568-2838587 | None:intergenic | 20.0% |
| !! | AATCAAAACTAAAGTGATTA+TGG | + | chr2_2:2838569-2838588 | None:intergenic | 20.0% |
| !! | ATTAATGAATCATGAATGTA+AGG | - | chr2_2:2838660-2838679 | Msa0230670:intron | 20.0% |
| !! | AAAGAATGAACATAAAATGA+AGG | + | chr2_2:2838766-2838785 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTTTTTTTGAGG+GGG | - | chr2_2:2839477-2839496 | Msa0230670:intron | 20.0% |
| !!! | ACCTTTTTTTTTTTTGTTGA+GGG | - | chr2_2:2840950-2840969 | Msa0230670:five_prime_UTR | 20.0% |
| !! | TTTAGGGTTTGATATTTAGA+CGG | + | chr2_2:2835609-2835628 | None:intergenic | 25.0% |
| ! | AATTACAATCAGAAACTGAA+TGG | + | chr2_2:2835758-2835777 | None:intergenic | 25.0% |
| ! | TTCAGTTTCTGATTGTAATT+TGG | - | chr2_2:2835758-2835777 | Msa0230670:intron | 25.0% |
| ! | TCAGTTTCTGATTGTAATTT+GGG | - | chr2_2:2835759-2835778 | Msa0230670:intron | 25.0% |
| ! | ATAATTTGGATAGCTTCAAA+AGG | + | chr2_2:2836192-2836211 | None:intergenic | 25.0% |
| !!! | AATTAGCCTTTTTTTAGTTG+TGG | - | chr2_2:2836499-2836518 | Msa0230670:intron | 25.0% |
| !!! | TTATTTTTCTTTCCATTTGC+AGG | - | chr2_2:2836557-2836576 | Msa0230670:intron | 25.0% |
| ! | ATTGCTAACGATATTGAATA+AGG | + | chr2_2:2836685-2836704 | None:intergenic | 25.0% |
| ! | TGCTATATTAAAACTACACA+TGG | + | chr2_2:2836923-2836942 | None:intergenic | 25.0% |
| ! | GGAAATTAAACAAACCTATT+GGG | + | chr2_2:2837593-2837612 | None:intergenic | 25.0% |
| ! | AGGAAATTAAACAAACCTAT+TGG | + | chr2_2:2837594-2837613 | None:intergenic | 25.0% |
| ! | ATATAAAGCAGAAACTAAAG+AGG | + | chr2_2:2837614-2837633 | None:intergenic | 25.0% |
| ! | AGTTTCTGCTTTATATATTG+TGG | - | chr2_2:2837618-2837637 | Msa0230670:CDS | 25.0% |
| ! | ACATAGCTGAAAAAATAAAG+AGG | + | chr2_2:2837702-2837721 | None:intergenic | 25.0% |
| !!! | GACTTTATTTGCTGTTTATA+TGG | - | chr2_2:2837765-2837784 | Msa0230670:intron | 25.0% |
| ! | ATATAAATGCAATTTGAGTG+GGG | - | chr2_2:2837949-2837968 | Msa0230670:intron | 25.0% |
| ! | ATGGTGTTTGTGAATATATT+TGG | - | chr2_2:2838004-2838023 | Msa0230670:intron | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | + | chr2_2:2838223-2838242 | None:intergenic | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | + | chr2_2:2838224-2838243 | None:intergenic | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | - | chr2_2:2838235-2838254 | Msa0230670:intron | 25.0% |
| ! | ATGATGTGTTTGTTTAAATG+GGG | + | chr2_2:2838433-2838452 | None:intergenic | 25.0% |
| ! | GATGATGTGTTTGTTTAAAT+GGG | + | chr2_2:2838434-2838453 | None:intergenic | 25.0% |
| !! | TGATGATGTGTTTGTTTAAA+TGG | + | chr2_2:2838435-2838454 | None:intergenic | 25.0% |
| !!! | TTCATTACGTTTTGAATAAG+TGG | + | chr2_2:2838716-2838735 | None:intergenic | 25.0% |
| ! | AATGTATTCAAGAATGTAGA+CGG | + | chr2_2:2839557-2839576 | None:intergenic | 25.0% |
| !!! | TAAACATGTGTTGATTTTCT+TGG | - | chr2_2:2839839-2839858 | Msa0230670:intron | 25.0% |
| !!! | TAAGTGTCATTGTTTTTCAA+TGG | - | chr2_2:2840375-2840394 | Msa0230670:CDS | 25.0% |
| !!! | GACCTTTTTTTTTTTTGTTG+AGG | - | chr2_2:2840949-2840968 | Msa0230670:five_prime_UTR | 25.0% |
| !!! | CCTTTTTTTTTTTTGTTGAG+GGG | - | chr2_2:2840951-2840970 | Msa0230670:five_prime_UTR | 25.0% |
| ! | TTAGGGTTGTTCTTTTTAGA+GGG | + | chr2_2:2835643-2835662 | None:intergenic | 30.0% |
| ! | ATTAGGGTTGTTCTTTTTAG+AGG | + | chr2_2:2835644-2835663 | None:intergenic | 30.0% |
| ATGGAATCGAATTGAATTGA+GGG | + | chr2_2:2835734-2835753 | None:intergenic | 30.0% | |
| AATGGAATCGAATTGAATTG+AGG | + | chr2_2:2835735-2835754 | None:intergenic | 30.0% | |
| ! | CTGATTGTAATTTGGGATTT+AGG | - | chr2_2:2835766-2835785 | Msa0230670:intron | 30.0% |
| TATAGGAAGATTATGTGTTG+AGG | - | chr2_2:2835999-2836018 | Msa0230670:CDS | 30.0% | |
| ATATCTGAGGAATTGTGTAT+TGG | - | chr2_2:2836048-2836067 | Msa0230670:CDS | 30.0% | |
| AAAGATACCACTCATAGATA+CGG | - | chr2_2:2836234-2836253 | Msa0230670:CDS | 30.0% | |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | + | chr2_2:2836261-2836280 | None:intergenic | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | - | chr2_2:2836259-2836278 | Msa0230670:CDS | 30.0% |
| TAATTATAATTGCAGGTTGC+CGG | - | chr2_2:2836355-2836374 | Msa0230670:CDS | 30.0% | |
| GTCTATCCACAACTAAAAAA+AGG | + | chr2_2:2836508-2836527 | None:intergenic | 30.0% | |
| !! | ATTGTTTGAAAGCGTTATGT+TGG | - | chr2_2:2836762-2836781 | Msa0230670:intron | 30.0% |
| !!! | ACCTTTTACTTTTAAAGCGA+AGG | + | chr2_2:2836953-2836972 | None:intergenic | 30.0% |
| TAATGTTAGACTGTTGTGTT+GGG | + | chr2_2:2837113-2837132 | None:intergenic | 30.0% | |
| TTAATGTTAGACTGTTGTGT+TGG | + | chr2_2:2837114-2837133 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTGCCTTTTCCTTC+TGG | - | chr2_2:2837231-2837250 | Msa0230670:CDS | 30.0% |
| !!! | TCATGTCTCTCTCATTTTTT+TGG | + | chr2_2:2837367-2837386 | None:intergenic | 30.0% |
| AAAAAATGAGAGAGACATGA+AGG | - | chr2_2:2837367-2837386 | Msa0230670:CDS | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | - | chr2_2:2837419-2837438 | Msa0230670:intron | 30.0% | |
| ! | ACATGTATATCTCAGCATTT+TGG | + | chr2_2:2837496-2837515 | None:intergenic | 30.0% |
| GGAATTAATATCTTCTTGTC+CGG | - | chr2_2:2837837-2837856 | Msa0230670:intron | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | - | chr2_2:2837862-2837881 | Msa0230670:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | - | chr2_2:2837868-2837887 | Msa0230670:intron | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | - | chr2_2:2837869-2837888 | Msa0230670:intron | 30.0% | |
| TATCTCCTACATCTCATTTA+CGG | - | chr2_2:2837924-2837943 | Msa0230670:intron | 30.0% | |
| TATTTCCGTAAATGAGATGT+AGG | + | chr2_2:2837932-2837951 | None:intergenic | 30.0% | |
| TCTGAATATCTATGATGCAT+AGG | - | chr2_2:2838029-2838048 | Msa0230670:intron | 30.0% | |
| AAATTTGACGTATTACGTAC+AGG | + | chr2_2:2838087-2838106 | None:intergenic | 30.0% | |
| ! | GCTTTTGATGAAAATAGTAG+AGG | + | chr2_2:2838225-2838244 | None:intergenic | 30.0% |
| !! | TATATTCAGCTTTGAAGCAT+GGG | + | chr2_2:2838396-2838415 | None:intergenic | 30.0% |
| !! | ATATATTCAGCTTTGAAGCA+TGG | + | chr2_2:2838397-2838416 | None:intergenic | 30.0% |
| TGATGTGTTTGTTTAAATGG+GGG | + | chr2_2:2838432-2838451 | None:intergenic | 30.0% | |
| TAAAAGCTTAGATGATGTTC+AGG | - | chr2_2:2838604-2838623 | Msa0230670:intron | 30.0% | |
| AATGAATCATGAATGTAAGG+CGG | - | chr2_2:2838663-2838682 | Msa0230670:intron | 30.0% | |
| TAACAGATAATTGGGACTTT+GGG | + | chr2_2:2839274-2839293 | None:intergenic | 30.0% | |
| CAAGTGTCTAACAGATAATT+GGG | + | chr2_2:2839282-2839301 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | + | chr2_2:2839338-2839357 | None:intergenic | 30.0% | |
| CATCACATCTGATATAAACT+GGG | + | chr2_2:2839339-2839358 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | + | chr2_2:2839340-2839359 | None:intergenic | 30.0% | |
| ATCAACTGTTCAATAAGTAG+TGG | + | chr2_2:2839365-2839384 | None:intergenic | 30.0% | |
| ACTACTTATTGAACAGTTGA+TGG | - | chr2_2:2839364-2839383 | Msa0230670:intron | 30.0% | |
| AAAATACCTTTCCAAGACAA+AGG | + | chr2_2:2839442-2839461 | None:intergenic | 30.0% | |
| ATGTATTCAAGAATGTAGAC+GGG | + | chr2_2:2839556-2839575 | None:intergenic | 30.0% | |
| CAGAGTGATTTACTTTAGAT+TGG | - | chr2_2:2839613-2839632 | Msa0230670:intron | 30.0% | |
| !!! | TGTTGATTTTCTTGGAAACT+TGG | - | chr2_2:2839847-2839866 | Msa0230670:intron | 30.0% |
| TTGCTATAGTAGAACAGTAA+TGG | + | chr2_2:2839951-2839970 | None:intergenic | 30.0% | |
| TGATAGAGTTATTGTTTACG+AGG | - | chr2_2:2840280-2840299 | Msa0230670:intron | 30.0% | |
| GATAGAGTTATTGTTTACGA+GGG | - | chr2_2:2840281-2840300 | Msa0230670:intron | 30.0% | |
| TGACACTTACAGATAAGAAA+AGG | + | chr2_2:2840364-2840383 | None:intergenic | 30.0% | |
| AAAAATTATGTTGTGCTCTC+TGG | - | chr2_2:2840452-2840471 | Msa0230670:intron | 30.0% | |
| !! | ATTCAAGTTTGTTGATCCTT+GGG | + | chr2_2:2840563-2840582 | None:intergenic | 30.0% |
| CAACAAACTTGAATCAACAA+AGG | - | chr2_2:2840569-2840588 | Msa0230670:CDS | 30.0% | |
| CAGACTGCAACAAAATAAAA+CGG | + | chr2_2:2840735-2840754 | None:intergenic | 30.0% | |
| CCCCTCAACAAAAAAAAAAA+AGG | + | chr2_2:2840954-2840973 | None:intergenic | 30.0% | |
| !!! | CAGTTTTGTTATGCTTTGAT+GGG | - | chr2_2:2840979-2840998 | Msa0230670:five_prime_UTR | 30.0% |
| !! | TTCTTTTTAGAGGGATGGAA+AGG | + | chr2_2:2835634-2835653 | None:intergenic | 35.0% |
| CAATCAGAAACTGAATGGAA+TGG | + | chr2_2:2835753-2835772 | None:intergenic | 35.0% | |
| !! | CATTCTTGACGACACTTTTT+GGG | + | chr2_2:2835872-2835891 | None:intergenic | 35.0% |
| ! | ACATTCTTGACGACACTTTT+TGG | + | chr2_2:2835873-2835892 | None:intergenic | 35.0% |
| GAAGATTGCTTACATATCTG+AGG | - | chr2_2:2836035-2836054 | Msa0230670:CDS | 35.0% | |
| GTATCTTTGTCCAAATCCTT+CGG | + | chr2_2:2836222-2836241 | None:intergenic | 35.0% | |
| TTGTGGATAGACATGATTTG+AGG | - | chr2_2:2836516-2836535 | Msa0230670:intron | 35.0% | |
| !! | GAAATTTTGACCCATTTTCG+AGG | - | chr2_2:2836597-2836616 | Msa0230670:intron | 35.0% |
| CAATTCAGATCCTCGAAAAT+GGG | + | chr2_2:2836610-2836629 | None:intergenic | 35.0% | |
| ! | CATTCTAGAGGATGATTTGA+AGG | - | chr2_2:2836647-2836666 | Msa0230670:intron | 35.0% |
| TCCAACACATTCATTGTGTT+GGG | - | chr2_2:2836855-2836874 | Msa0230670:intron | 35.0% | |
| !! | GCCTTCGCTTTAAAAGTAAA+AGG | - | chr2_2:2836949-2836968 | Msa0230670:intron | 35.0% |
| GCTACGTTTAATTCTAGTGA+AGG | + | chr2_2:2837059-2837078 | None:intergenic | 35.0% | |
| !! | GTAATGTTGGTGATCTTTCA+GGG | - | chr2_2:2837432-2837451 | Msa0230670:intron | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | - | chr2_2:2837433-2837452 | Msa0230670:intron | 35.0% |
| ! | GTATATCTCAGCATTTTGGA+TGG | + | chr2_2:2837492-2837511 | None:intergenic | 35.0% |
| ATATCACTGTGAACTGTCAT+TGG | - | chr2_2:2837641-2837660 | Msa0230670:CDS | 35.0% | |
| !!! | GAACTGTCATTGGTTTTTGT+CGG | - | chr2_2:2837651-2837670 | Msa0230670:CDS | 35.0% |
| !!! | AACTGTCATTGGTTTTTGTC+GGG | - | chr2_2:2837652-2837671 | Msa0230670:CDS | 35.0% |
| ! | ATTTTCTGTTGGAACAAAGC+CGG | + | chr2_2:2837859-2837878 | None:intergenic | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | + | chr2_2:2837870-2837889 | None:intergenic | 35.0% |
| CAACACTGAGATTGATTGAA+TGG | - | chr2_2:2837985-2838004 | Msa0230670:intron | 35.0% | |
| TATCTATGATGCATAGGTAC+CGG | - | chr2_2:2838035-2838054 | Msa0230670:intron | 35.0% | |
| ATGAATCATGAATGTAAGGC+GGG | - | chr2_2:2838664-2838683 | Msa0230670:intron | 35.0% | |
| TTCACAGATTATTGTGATGC+TGG | - | chr2_2:2839041-2839060 | Msa0230670:CDS | 35.0% | |
| TCACAGATTATTGTGATGCT+GGG | - | chr2_2:2839042-2839061 | Msa0230670:CDS | 35.0% | |
| ! | TTCACCTTCTCCTTTTATTC+AGG | - | chr2_2:2839160-2839179 | Msa0230670:CDS | 35.0% |
| TTGAAACCTGACACTATAGA+AGG | - | chr2_2:2839191-2839210 | Msa0230670:CDS | 35.0% | |
| TTGTATGATACGTTGAACTC+AGG | + | chr2_2:2839236-2839255 | None:intergenic | 35.0% | |
| CTAACAGATAATTGGGACTT+TGG | + | chr2_2:2839275-2839294 | None:intergenic | 35.0% | |
| GCAAGTGTCTAACAGATAAT+TGG | + | chr2_2:2839283-2839302 | None:intergenic | 35.0% | |
| TCACATCTGATATAAACTGG+GGG | + | chr2_2:2839337-2839356 | None:intergenic | 35.0% | |
| ! | ACTGCTGTTTATTTCCTCTA+TGG | - | chr2_2:2839711-2839730 | Msa0230670:intron | 35.0% |
| CATCACAAATAGATGTCTAC+AGG | + | chr2_2:2839974-2839993 | None:intergenic | 35.0% | |
| AAACACACAACAAAGCTAAG+TGG | + | chr2_2:2840025-2840044 | None:intergenic | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | + | chr2_2:2840311-2840330 | None:intergenic | 35.0% | |
| !! | GATTCAAGTTTGTTGATCCT+TGG | + | chr2_2:2840564-2840583 | None:intergenic | 35.0% |
| GAGTATAAACTCAGTCATCT+AGG | + | chr2_2:2840629-2840648 | None:intergenic | 35.0% | |
| GATGACTGAGTTTATACTCA+AGG | - | chr2_2:2840630-2840649 | Msa0230670:intron | 35.0% | |
| !! | TTTGCATTTGCTATTGCTCT+TGG | - | chr2_2:2840672-2840691 | Msa0230670:intron | 35.0% |
| AATTTGATGCACTGTTGCAT+TGG | + | chr2_2:2840766-2840785 | None:intergenic | 35.0% | |
| TCAATTAAAGCTGAGATTCG+AGG | + | chr2_2:2840798-2840817 | None:intergenic | 35.0% | |
| ! | AAAGACCAACTTTTATGGCA+AGG | + | chr2_2:2840828-2840847 | None:intergenic | 35.0% |
| ! | GGGAAAAAGACCAACTTTTA+TGG | + | chr2_2:2840833-2840852 | None:intergenic | 35.0% |
| CCATCAAAGCATAACAAAAC+TGG | + | chr2_2:2840981-2841000 | None:intergenic | 35.0% | |
| !!! | CCAGTTTTGTTATGCTTTGA+TGG | - | chr2_2:2840978-2840997 | Msa0230670:five_prime_UTR | 35.0% |
| GGGTGAATCTGATTAATACT+TGG | - | chr2_2:2840999-2841018 | Msa0230670:five_prime_UTR | 35.0% | |
| GAGGGATGGAAAGGAATTTA+GGG | + | chr2_2:2835625-2835644 | None:intergenic | 40.0% | |
| AGAGGGATGGAAAGGAATTT+AGG | + | chr2_2:2835626-2835645 | None:intergenic | 40.0% | |
| !! | GGTTGTTCTTTTTAGAGGGA+TGG | + | chr2_2:2835639-2835658 | None:intergenic | 40.0% |
| TTTGAGGAAATGGGAGAGTT+GGG | + | chr2_2:2835669-2835688 | None:intergenic | 40.0% | |
| AATGGGTCGTTTGAGGAAAT+GGG | + | chr2_2:2835678-2835697 | None:intergenic | 40.0% | |
| AATAGAGAATGGGTCGTTTG+AGG | + | chr2_2:2835685-2835704 | None:intergenic | 40.0% | |
| CAAACGACCCATTCTCTATT+CGG | - | chr2_2:2835685-2835704 | Msa0230670:three_prime_UTR | 40.0% | |
| GAGCTTACCGAATAGAGAAT+GGG | + | chr2_2:2835695-2835714 | None:intergenic | 40.0% | |
| AGAGCTTACCGAATAGAGAA+TGG | + | chr2_2:2835696-2835715 | None:intergenic | 40.0% | |
| GAGGAATTGTGTATTGGATG+CGG | - | chr2_2:2836054-2836073 | Msa0230670:CDS | 40.0% | |
| !! | CCTTCGGCAAGTTGATAATT+TGG | + | chr2_2:2836206-2836225 | None:intergenic | 40.0% |
| CCAAATTATCAACTTGCCGA+AGG | - | chr2_2:2836203-2836222 | Msa0230670:intron | 40.0% | |
| TATCAACTTGCCGAAGGATT+TGG | - | chr2_2:2836209-2836228 | Msa0230670:intron | 40.0% | |
| ATTAGGACCGTATCTATGAG+TGG | + | chr2_2:2836244-2836263 | None:intergenic | 40.0% | |
| TTGGTTGGGACAAATGGAAT+TGG | - | chr2_2:2836404-2836423 | Msa0230670:CDS | 40.0% | |
| TGGTTGGGACAAATGGAATT+GGG | - | chr2_2:2836405-2836424 | Msa0230670:CDS | 40.0% | |
| TGGAAAATTGAAGCCCAACT+TGG | - | chr2_2:2836454-2836473 | Msa0230670:intron | 40.0% | |
| GGAAAATTGAAGCCCAACTT+GGG | - | chr2_2:2836455-2836474 | Msa0230670:intron | 40.0% | |
| AAAATTTCCTGCCAATCAGG+CGG | + | chr2_2:2836585-2836604 | None:intergenic | 40.0% | |
| GTCAAAATTTCCTGCCAATC+AGG | + | chr2_2:2836588-2836607 | None:intergenic | 40.0% | |
| GCAATTCAGATCCTCGAAAA+TGG | + | chr2_2:2836611-2836630 | None:intergenic | 40.0% | |
| TTACTTCACTCGCATTCTAG+AGG | - | chr2_2:2836635-2836654 | Msa0230670:intron | 40.0% | |
| CAACACAATGAATGTGTTGG+AGG | + | chr2_2:2836856-2836875 | None:intergenic | 40.0% | |
| CTCCAACACATTCATTGTGT+TGG | - | chr2_2:2836854-2836873 | Msa0230670:intron | 40.0% | |
| ACCCAACACAATGAATGTGT+TGG | + | chr2_2:2836859-2836878 | None:intergenic | 40.0% | |
| TTCATTGTGTTGGGTGTGAA+AGG | - | chr2_2:2836864-2836883 | Msa0230670:intron | 40.0% | |
| TCATTGTGTTGGGTGTGAAA+GGG | - | chr2_2:2836865-2836884 | Msa0230670:intron | 40.0% | |
| ACTACACATGGCATATCTCT+AGG | + | chr2_2:2836911-2836930 | None:intergenic | 40.0% | |
| AAACATGATTAGAGGCCAGA+AGG | + | chr2_2:2837249-2837268 | None:intergenic | 40.0% | |
| ACATTCCAAAAGCTGTGCAA+GGG | - | chr2_2:2837321-2837340 | Msa0230670:CDS | 40.0% | |
| ATGAGAGAGACATGAAGGAA+AGG | - | chr2_2:2837372-2837391 | Msa0230670:CDS | 40.0% | |
| !! | CGTAATGTTGGTGATCTTTC+AGG | - | chr2_2:2837431-2837450 | Msa0230670:intron | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | - | chr2_2:2837434-2837453 | Msa0230670:intron | 40.0% |
| TGATGAACCTTCCAGTTATC+TGG | - | chr2_2:2837517-2837536 | Msa0230670:CDS | 40.0% | |
| TTCACATCCAGATAACTGGA+AGG | + | chr2_2:2837527-2837546 | None:intergenic | 40.0% | |
| CTGTTTCACATCCAGATAAC+TGG | + | chr2_2:2837531-2837550 | None:intergenic | 40.0% | |
| GTTATCTGGATGTGAAACAG+AGG | - | chr2_2:2837531-2837550 | Msa0230670:CDS | 40.0% | |
| ! | TGCTGTTTATATGGCAAACC+TGG | - | chr2_2:2837774-2837793 | Msa0230670:intron | 40.0% |
| ATTCCTTCTCTGACTGAGAA+AGG | + | chr2_2:2837822-2837841 | None:intergenic | 40.0% | |
| AGAAAATCTTAGGTTTCGGG+AGG | - | chr2_2:2837872-2837891 | Msa0230670:intron | 40.0% | |
| GGAGGTTTCTCTTACTTTCA+AGG | - | chr2_2:2837890-2837909 | Msa0230670:intron | 40.0% | |
| TTTGGTTATTGCGTCGTAGT+TGG | + | chr2_2:2838294-2838313 | None:intergenic | 40.0% | |
| CCTAGATACAACATCAGAGA+AGG | + | chr2_2:2838900-2838919 | None:intergenic | 40.0% | |
| CCTTCTCTGATGTTGTATCT+AGG | - | chr2_2:2838897-2838916 | Msa0230670:intron | 40.0% | |
| AGCATAAGTTTGAGCTTCCT+CGG | + | chr2_2:2838947-2838966 | None:intergenic | 40.0% | |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | + | chr2_2:2838981-2839000 | None:intergenic | 40.0% |
| !! | ATTGCCTTGAGTTTTGGTCA+TGG | + | chr2_2:2838986-2839005 | None:intergenic | 40.0% |
| ! | CCTGAAATTGCCTTGAGTTT+TGG | + | chr2_2:2838992-2839011 | None:intergenic | 40.0% |
| CCAAAACTCAAGGCAATTTC+AGG | - | chr2_2:2838989-2839008 | Msa0230670:intron | 40.0% | |
| TTCAGGCTTCATGTAGTTGA+AGG | - | chr2_2:2839006-2839025 | Msa0230670:CDS | 40.0% | |
| GAATACCAGCATACGAATGA+AGG | + | chr2_2:2839091-2839110 | None:intergenic | 40.0% | |
| AACAAACCGGCCTGAATAAA+AGG | + | chr2_2:2839173-2839192 | None:intergenic | 40.0% | |
| AGTGTCAGGTTTCAACAAAC+CGG | + | chr2_2:2839186-2839205 | None:intergenic | 40.0% | |
| AAACCTGACACTATAGAAGG+TGG | - | chr2_2:2839194-2839213 | Msa0230670:CDS | 40.0% | |
| ! | GACTTTGGGCTAATTTTCTG+AGG | + | chr2_2:2839260-2839279 | None:intergenic | 40.0% |
| CAGAAAGATTCTGAACCTCT+TGG | + | chr2_2:2839391-2839410 | None:intergenic | 40.0% | |
| CAAGAGGTTCAGAATCTTTC+TGG | - | chr2_2:2839389-2839408 | Msa0230670:intron | 40.0% | |
| GTTATGCCTTTGTCTTGGAA+AGG | - | chr2_2:2839433-2839452 | Msa0230670:intron | 40.0% | |
| AAGGTGCACAAGTAATCTCA+AGG | + | chr2_2:2839504-2839523 | None:intergenic | 40.0% | |
| TAGACGGGAAAGAAAAGACA+GGG | + | chr2_2:2839541-2839560 | None:intergenic | 40.0% | |
| CTGAAAGAGCTAAATTACGC+TGG | + | chr2_2:2839596-2839615 | None:intergenic | 40.0% | |
| ATCTCAAGTCTCAACCATAG+AGG | + | chr2_2:2839728-2839747 | None:intergenic | 40.0% | |
| ! | AGATTTGGCTTCTCTAGTGT+GGG | + | chr2_2:2839760-2839779 | None:intergenic | 40.0% |
| TAGAGAAGCCAAATCTGTGT+TGG | - | chr2_2:2839764-2839783 | Msa0230670:intron | 40.0% | |
| !! | CAAATCTGTGTTGGTGATGT+CGG | - | chr2_2:2839773-2839792 | Msa0230670:intron | 40.0% |
| ! | TGACGTTGAAGCAAGCTTTT+TGG | - | chr2_2:2839992-2840011 | Msa0230670:CDS | 40.0% |
| TCTATCAGATAGATGTCTGC+AGG | + | chr2_2:2840131-2840150 | None:intergenic | 40.0% | |
| TCGGAATCAAGATATGCACT+TGG | + | chr2_2:2840158-2840177 | None:intergenic | 40.0% | |
| TTGCTGCAAAAGTCATCAAG+AGG | - | chr2_2:2840189-2840208 | Msa0230670:CDS | 40.0% | |
| GAAATCGTGCTCAACGATAA+AGG | + | chr2_2:2840240-2840259 | None:intergenic | 40.0% | |
| AATTATGTTGTGCTCTCTGG+TGG | - | chr2_2:2840455-2840474 | Msa0230670:intron | 40.0% | |
| TTTCAGTTGCAGTGAAAGGT+AGG | + | chr2_2:2840705-2840724 | None:intergenic | 40.0% | |
| ! | CAGTTTTCAGTTGCAGTGAA+AGG | + | chr2_2:2840709-2840728 | None:intergenic | 40.0% |
| AAAGCTGAGATTCGAGGAAA+AGG | + | chr2_2:2840792-2840811 | None:intergenic | 40.0% | |
| TGATGCCTTGCCATAAAAGT+TGG | - | chr2_2:2840820-2840839 | Msa0230670:intron | 40.0% | |
| CGTTGAAATATGCCTTCAAC+GGG | + | chr2_2:2840853-2840872 | None:intergenic | 40.0% | |
| CCGTTGAAATATGCCTTCAA+CGG | + | chr2_2:2840854-2840873 | None:intergenic | 40.0% | |
| ! | CCGTTGAAGGCATATTTCAA+CGG | - | chr2_2:2840851-2840870 | Msa0230670:intron | 40.0% |
| GGATTGAAGAGTCTACATGT+AGG | - | chr2_2:2840872-2840891 | Msa0230670:intron | 40.0% | |
| TTGAGGAAATGGGAGAGTTG+GGG | + | chr2_2:2835668-2835687 | None:intergenic | 45.0% | |
| GTTTGAGGAAATGGGAGAGT+TGG | + | chr2_2:2835670-2835689 | None:intergenic | 45.0% | |
| GAATGGGTCGTTTGAGGAAA+TGG | + | chr2_2:2835679-2835698 | None:intergenic | 45.0% | |
| ! | AGGGCTGTGATGTTACTTAC+CGG | + | chr2_2:2835921-2835940 | None:intergenic | 45.0% |
| TGGATGCGGTATCTGTGTTA+AGG | - | chr2_2:2836068-2836087 | Msa0230670:intron | 45.0% | |
| AAGCTACACAGGTTTGTGTG+CGG | - | chr2_2:2836270-2836289 | Msa0230670:CDS | 45.0% | |
| !! | CTTGGTTTGGTTGGGACAAA+TGG | - | chr2_2:2836398-2836417 | Msa0230670:CDS | 45.0% |
| ! | GTCGACTGCACTTAAGGTTT+TGG | - | chr2_2:2836430-2836449 | Msa0230670:CDS | 45.0% |
| !! | ACTGCACTTAAGGTTTTGGC+TGG | - | chr2_2:2836434-2836453 | Msa0230670:CDS | 45.0% |
| ACTGTGAAACGACCCAAGTT+GGG | + | chr2_2:2836470-2836489 | None:intergenic | 45.0% | |
| TACTGTGAAACGACCCAAGT+TGG | + | chr2_2:2836471-2836490 | None:intergenic | 45.0% | |
| TGGAATTTCCGCCTTCTTTG+TGG | - | chr2_2:2836782-2836801 | Msa0230670:intron | 45.0% | |
| CATTGTGTTGGGTGTGAAAG+GGG | - | chr2_2:2836866-2836885 | Msa0230670:intron | 45.0% | |
| ! | GGCATATCTCTAGGAAGTGT+GGG | + | chr2_2:2836902-2836921 | None:intergenic | 45.0% |
| ! | TGGCATATCTCTAGGAAGTG+TGG | + | chr2_2:2836903-2836922 | None:intergenic | 45.0% |
| GATTAGAGGCCAGAAGGAAA+AGG | + | chr2_2:2837243-2837262 | None:intergenic | 45.0% | |
| GGAATGTGGTCAACATACTG+AGG | + | chr2_2:2837308-2837327 | None:intergenic | 45.0% | |
| !!! | CTTGCACAGCTTTTGGAATG+TGG | + | chr2_2:2837322-2837341 | None:intergenic | 45.0% |
| CACATTCCAAAAGCTGTGCA+AGG | - | chr2_2:2837320-2837339 | Msa0230670:CDS | 45.0% | |
| ! | ACATTCCCTTGCACAGCTTT+TGG | + | chr2_2:2837329-2837348 | None:intergenic | 45.0% |
| AAAAGCTGTGCAAGGGAATG+TGG | - | chr2_2:2837328-2837347 | Msa0230670:CDS | 45.0% | |
| AAAGCTGTGCAAGGGAATGT+GGG | - | chr2_2:2837329-2837348 | Msa0230670:CDS | 45.0% | |
| TGAAAGCTGCCCAAGTTGTT+CGG | - | chr2_2:2837555-2837574 | Msa0230670:CDS | 45.0% | |
| GAGCAATGACCGAACAACTT+GGG | + | chr2_2:2837567-2837586 | None:intergenic | 45.0% | |
| TGAGCAATGACCGAACAACT+TGG | + | chr2_2:2837568-2837587 | None:intergenic | 45.0% | |
| AAGTTGTTCGGTCATTGCTC+AGG | - | chr2_2:2837567-2837586 | Msa0230670:CDS | 45.0% | |
| ! | CGAGCACGATCTTAGTGTTT+TGG | - | chr2_2:2837731-2837750 | Msa0230670:intron | 45.0% |
| TATGGCAAACCTGGTGCATA+TGG | - | chr2_2:2837783-2837802 | Msa0230670:intron | 45.0% | |
| GTTACAACACCATATGCACC+AGG | + | chr2_2:2837795-2837814 | None:intergenic | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | - | chr2_2:2837816-2837835 | Msa0230670:intron | 45.0% | |
| !! | ATGATGCATAGGTACCGGTA+CGG | - | chr2_2:2838040-2838059 | Msa0230670:intron | 45.0% |
| ! | AAATGAAGGTACGGGTACGT+TGG | - | chr2_2:2838111-2838130 | Msa0230670:intron | 45.0% |
| TTGGTGCAGCAAAAACGTAC+AGG | + | chr2_2:2838275-2838294 | None:intergenic | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | - | chr2_2:2838366-2838385 | Msa0230670:intron | 45.0% | |
| ! | CTCCAAACATGGAGAAGTAC+CGG | + | chr2_2:2838371-2838390 | None:intergenic | 45.0% |
| AAGCATGGGTACTCCAAACA+TGG | + | chr2_2:2838382-2838401 | None:intergenic | 45.0% | |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | + | chr2_2:2838982-2839001 | None:intergenic | 45.0% |
| CCAACCATGACCAAAACTCA+AGG | - | chr2_2:2838979-2838998 | Msa0230670:intron | 45.0% | |
| ATTGTGATGCTGGGTGAGAA+TGG | - | chr2_2:2839051-2839070 | Msa0230670:CDS | 45.0% | |
| TTGTGATGCTGGGTGAGAAT+GGG | - | chr2_2:2839052-2839071 | Msa0230670:CDS | 45.0% | |
| ! | CCTTCTCCTTTTATTCAGGC+CGG | - | chr2_2:2839164-2839183 | Msa0230670:CDS | 45.0% |
| GATCCACCTTCTATAGTGTC+AGG | + | chr2_2:2839200-2839219 | None:intergenic | 45.0% | |
| !! | TGAACAGTTGATGGACCAAG+AGG | - | chr2_2:2839373-2839392 | Msa0230670:intron | 45.0% |
| GAGGTTCAGAATCTTTCTGG+TGG | - | chr2_2:2839392-2839411 | Msa0230670:intron | 45.0% | |
| GTTGCGTTATGCCTTTGTCT+TGG | - | chr2_2:2839428-2839447 | Msa0230670:intron | 45.0% | |
| CAGGGCAGACACAATAACTA+AGG | + | chr2_2:2839523-2839542 | None:intergenic | 45.0% | |
| GTAGACGGGAAAGAAAAGAC+AGG | + | chr2_2:2839542-2839561 | None:intergenic | 45.0% | |
| ! | CAGATTTGGCTTCTCTAGTG+TGG | + | chr2_2:2839761-2839780 | None:intergenic | 45.0% |
| CGACATCACCAACACAGATT+TGG | + | chr2_2:2839775-2839794 | None:intergenic | 45.0% | |
| TGCAGCAACAATACGCTGTT+CGG | + | chr2_2:2840177-2840196 | None:intergenic | 45.0% | |
| CGTTGAGCACGATTTCATCA+TGG | - | chr2_2:2840244-2840263 | Msa0230670:intron | 45.0% | |
| TGTCCACAATCATTGCTGAC+TGG | - | chr2_2:2840332-2840351 | Msa0230670:CDS | 45.0% | |
| ! | GTCCACAATCATTGCTGACT+GGG | - | chr2_2:2840333-2840352 | Msa0230670:CDS | 45.0% |
| ATCCCAGTCAGCAATGATTG+TGG | + | chr2_2:2840338-2840357 | None:intergenic | 45.0% | |
| TCCTTGGGCGGAAATTAGTT+GGG | + | chr2_2:2840548-2840567 | None:intergenic | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | + | chr2_2:2840549-2840568 | None:intergenic | 45.0% | |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | + | chr2_2:2840560-2840579 | None:intergenic | 45.0% |
| GACAGAGAGCAAAAGAATGC+TGG | - | chr2_2:2840591-2840610 | Msa0230670:intron | 45.0% | |
| !!! | GTTGGTCTTTTTCCCGTTGA+AGG | - | chr2_2:2840838-2840857 | Msa0230670:intron | 45.0% |
| TGAAGAGTCTACATGTAGGC+AGG | - | chr2_2:2840876-2840895 | Msa0230670:intron | 45.0% | |
| CATGTAGGCAGGACATATGT+TGG | - | chr2_2:2840887-2840906 | Msa0230670:intron | 45.0% | |
| !! | AAAAAATTAACAAAAATATA+AGG | + | chr2_2:2838530-2838549 | None:intergenic | 5.0% |
| ATGGGAGAGTTGGGGGATTA+GGG | + | chr2_2:2835660-2835679 | None:intergenic | 50.0% | |
| AATGGGAGAGTTGGGGGATT+AGG | + | chr2_2:2835661-2835680 | None:intergenic | 50.0% | |
| TGAGGAAATGGGAGAGTTGG+GGG | + | chr2_2:2835667-2835686 | None:intergenic | 50.0% | |
| CGTCGCAGTTGTCAACATGT+CGG | - | chr2_2:2835802-2835821 | Msa0230670:intron | 50.0% | |
| GCATCTGTCGTTGCTAACGA+TGG | + | chr2_2:2835846-2835865 | None:intergenic | 50.0% | |
| AGTTGTCCTGTCGTCAGAAC+CGG | - | chr2_2:2835899-2835918 | Msa0230670:intron | 50.0% | |
| !! | TACTTACCGGTTCTGACGAC+AGG | + | chr2_2:2835908-2835927 | None:intergenic | 50.0% |
| !! | GGCAAGTGCTTGGTTTGGTT+GGG | - | chr2_2:2836390-2836409 | Msa0230670:CDS | 50.0% |
| TGGGAAGTCGACTGCACTTA+AGG | - | chr2_2:2836424-2836443 | Msa0230670:CDS | 50.0% | |
| AATCAGGCGGTTCCTGCAAA+TGG | + | chr2_2:2836572-2836591 | None:intergenic | 50.0% | |
| ATTTGCAGGAACCGCCTGAT+TGG | - | chr2_2:2836571-2836590 | Msa0230670:intron | 50.0% | |
| CTAAGGGCGAACCACAAAGA+AGG | + | chr2_2:2836796-2836815 | None:intergenic | 50.0% | |
| TGCCGCAATTAGGCAGCTAA+GGG | + | chr2_2:2836812-2836831 | None:intergenic | 50.0% | |
| ATGCCGCAATTAGGCAGCTA+AGG | + | chr2_2:2836813-2836832 | None:intergenic | 50.0% | |
| AGCTGCCTAATTGCGGCATT+TGG | - | chr2_2:2836814-2836833 | Msa0230670:intron | 50.0% | |
| GCTGCCTAATTGCGGCATTT+GGG | - | chr2_2:2836815-2836834 | Msa0230670:intron | 50.0% | |
| GCAACCCAAATGCCGCAATT+AGG | + | chr2_2:2836822-2836841 | None:intergenic | 50.0% | |
| TGTGTTGGAGGCTGCAATGA+AGG | + | chr2_2:2836844-2836863 | None:intergenic | 50.0% | |
| AAGCTGTGCAAGGGAATGTG+GGG | - | chr2_2:2837330-2837349 | Msa0230670:CDS | 50.0% | |
| GCTCCAAAGGTTTGCCATTG+CGG | - | chr2_2:2837460-2837479 | Msa0230670:intron | 50.0% | |
| CAACCGCAATGGCAAACCTT+TGG | + | chr2_2:2837466-2837485 | None:intergenic | 50.0% | |
| TTGGATGGCAACAACCGCAA+TGG | + | chr2_2:2837477-2837496 | None:intergenic | 50.0% | |
| !! | ACATGGAGAAGTACCGGTAC+CGG | + | chr2_2:2838365-2838384 | None:intergenic | 50.0% |
| TGAATGTAAGGCGGGTCTAC+AGG | - | chr2_2:2838672-2838691 | Msa0230670:intron | 50.0% | |
| GAATGTAAGGCGGGTCTACA+GGG | - | chr2_2:2838673-2838692 | Msa0230670:intron | 50.0% | |
| GACGACCTTCATTCGTATGC+TGG | - | chr2_2:2839083-2839102 | Msa0230670:CDS | 50.0% | |
| CCGGCCTGAATAAAAGGAGA+AGG | + | chr2_2:2839167-2839186 | None:intergenic | 50.0% | |
| AGATGTCTGCAGGCTGTTGT+AGG | + | chr2_2:2840121-2840140 | None:intergenic | 50.0% | |
| ACCCAACTAATTTCCGCCCA+AGG | - | chr2_2:2840544-2840563 | Msa0230670:CDS | 50.0% | |
| ACCAAACCAAGCACTTGCCC+CGG | + | chr2_2:2836389-2836408 | None:intergenic | 55.0% | |
| !! | GGGCAAGTGCTTGGTTTGGT+TGG | - | chr2_2:2836389-2836408 | Msa0230670:CDS | 55.0% |
| AGGGCGAACCACAAAGAAGG+CGG | + | chr2_2:2836793-2836812 | None:intergenic | 55.0% | |
| CGCCCTTAGCTGCCTAATTG+CGG | - | chr2_2:2836807-2836826 | Msa0230670:intron | 55.0% | |
| TGTGTTGGGTGTGAAAGGGG+TGG | - | chr2_2:2836869-2836888 | Msa0230670:intron | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | - | chr2_2:2837447-2837466 | Msa0230670:intron | 55.0% | |
| GGTCATTGCTCAGGCCCAAT+AGG | - | chr2_2:2837576-2837595 | Msa0230670:CDS | 55.0% | |
| !! | ATAGGTACCGGTACGGTACC+CGG | - | chr2_2:2838047-2838066 | Msa0230670:intron | 55.0% |
| TACGGTACCCGGTATGGGTA+CGG | - | chr2_2:2838058-2838077 | Msa0230670:intron | 55.0% | |
| ACAGGTACCCGTACCCATAC+CGG | + | chr2_2:2838069-2838088 | None:intergenic | 55.0% | |
| ACGAGTACCATACGCGTACC+CGG | - | chr2_2:2838343-2838362 | Msa0230670:intron | 55.0% | |
| !! | CATGGAGAAGTACCGGTACC+GGG | + | chr2_2:2838364-2838383 | None:intergenic | 55.0% |
| CTAGGTTGCAGAGACTCCAC+AGG | - | chr2_2:2838915-2838934 | Msa0230670:intron | 55.0% | |
| ATGCTGGGTGAGAATGGGAC+AGG | - | chr2_2:2839057-2839076 | Msa0230670:CDS | 55.0% | |
| GGGGGTGAGTGTATGCATCA+CGG | + | chr2_2:2839319-2839338 | None:intergenic | 55.0% | |
| !! | ATTGCAGGTTGCCGGTTCCC+AGG | - | chr2_2:2836363-2836382 | Msa0230670:CDS | 60.0% |
| TGTGCAAGGGAATGTGGGGC+AGG | - | chr2_2:2837334-2837353 | Msa0230670:CDS | 60.0% | |
| TACCGGTACGGTACCCGGTA+TGG | - | chr2_2:2838052-2838071 | Msa0230670:intron | 60.0% | |
| ACCGGTACGGTACCCGGTAT+GGG | - | chr2_2:2838053-2838072 | Msa0230670:intron | 60.0% | |
| ! | ACCCATACCGGGTACCGTAC+CGG | + | chr2_2:2838057-2838076 | None:intergenic | 60.0% |
| ACGGTACCCGGTATGGGTAC+GGG | - | chr2_2:2838059-2838078 | Msa0230670:intron | 60.0% | |
| CAGGTACCCGTACCCATACC+GGG | + | chr2_2:2838068-2838087 | None:intergenic | 60.0% | |
| ACCATACGCGTACCCGGTAC+CGG | - | chr2_2:2838349-2838368 | Msa0230670:intron | 60.0% | |
| GGCGGGTCTACAGGGTAGTA+AGG | - | chr2_2:2838681-2838700 | Msa0230670:intron | 60.0% | |
| GACTCCACAGGAAACTGCCG+AGG | - | chr2_2:2838927-2838946 | Msa0230670:intron | 60.0% | |
| GCTTCCTCGGCAGTTTCCTG+TGG | + | chr2_2:2838934-2838953 | None:intergenic | 60.0% | |
| GCCGGGGCAAGTGCTTGGTT+TGG | - | chr2_2:2836385-2836404 | Msa0230670:CDS | 65.0% | |
| GCAGGAACCGCCTGATTGGC+AGG | - | chr2_2:2836575-2836594 | Msa0230670:intron | 65.0% | |
| ! | ACCGGTACCGGGTACGCGTA+TGG | + | chr2_2:2838353-2838372 | None:intergenic | 65.0% |
| !! | CAGGTTGCCGGTTCCCAGGC+CGG | - | chr2_2:2836367-2836386 | Msa0230670:CDS | 70.0% |
| !! | AGGTTGCCGGTTCCCAGGCC+GGG | - | chr2_2:2836368-2836387 | Msa0230670:CDS | 70.0% |
| ACTTGCCCCGGCCTGGGAAC+CGG | + | chr2_2:2836377-2836396 | None:intergenic | 70.0% | |
| CCAAGCACTTGCCCCGGCCT+GGG | + | chr2_2:2836383-2836402 | None:intergenic | 70.0% | |
| ACCAAGCACTTGCCCCGGCC+TGG | + | chr2_2:2836384-2836403 | None:intergenic | 70.0% | |
| !! | GGTTGCCGGTTCCCAGGCCG+GGG | - | chr2_2:2836369-2836388 | Msa0230670:CDS | 75.0% |
| CCCAGGCCGGGGCAAGTGCT+TGG | - | chr2_2:2836380-2836399 | Msa0230670:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 2835559 | 2841036 | 2835559 | ID=Msa0230670;Name=Msa0230670 |
| chr2_2 | mRNA | 2835559 | 2841036 | 2835559 | ID=Msa0230670-mRNA-1;Parent=Msa0230670;Name=Msa0230670-mRNA-1;_AED=0.17;_eAED=0.17;_QI=156|1|1|1|0.76|0.71|14|270|606 |
| chr2_2 | exon | 2835559 | 2835776 | 2835559 | ID=Msa0230670-mRNA-1:exon:1035;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2835812 | 2835847 | 2835812 | ID=Msa0230670-mRNA-1:exon:1034;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2835941 | 2836076 | 2835941 | ID=Msa0230670-mRNA-1:exon:1033;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2836222 | 2836467 | 2836222 | ID=Msa0230670-mRNA-1:exon:1032;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2837141 | 2837413 | 2837141 | ID=Msa0230670-mRNA-1:exon:1031;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2837491 | 2837676 | 2837491 | ID=Msa0230670-mRNA-1:exon:1030;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2838684 | 2838879 | 2838684 | ID=Msa0230670-mRNA-1:exon:1029;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2838998 | 2839302 | 2838998 | ID=Msa0230670-mRNA-1:exon:1028;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2839927 | 2840016 | 2839927 | ID=Msa0230670-mRNA-1:exon:1027;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2840108 | 2840225 | 2840108 | ID=Msa0230670-mRNA-1:exon:1026;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2840315 | 2840412 | 2840315 | ID=Msa0230670-mRNA-1:exon:1025;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2840506 | 2840591 | 2840506 | ID=Msa0230670-mRNA-1:exon:1024;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2840675 | 2840785 | 2840675 | ID=Msa0230670-mRNA-1:exon:1023;Parent=Msa0230670-mRNA-1 |
| chr2_2 | exon | 2840889 | 2841036 | 2840889 | ID=Msa0230670-mRNA-1:exon:1022;Parent=Msa0230670-mRNA-1 |
| chr2_2 | five_prime_UTR | 2840889 | 2841036 | 2840889 | ID=Msa0230670-mRNA-1:five_prime_utr;Parent=Msa0230670-mRNA-1 |
| chr2_2 | five_prime_UTR | 2840778 | 2840785 | 2840778 | ID=Msa0230670-mRNA-1:five_prime_utr;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2840675 | 2840777 | 2840675 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2840506 | 2840591 | 2840506 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2840315 | 2840412 | 2840315 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2840108 | 2840225 | 2840108 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2839927 | 2840016 | 2839927 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2838998 | 2839302 | 2838998 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2838684 | 2838879 | 2838684 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2837491 | 2837676 | 2837491 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2837141 | 2837413 | 2837141 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2836222 | 2836467 | 2836222 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | CDS | 2835957 | 2836076 | 2835957 | ID=Msa0230670-mRNA-1:cds;Parent=Msa0230670-mRNA-1 |
| chr2_2 | three_prime_UTR | 2835941 | 2835956 | 2835941 | ID=Msa0230670-mRNA-1:three_prime_utr;Parent=Msa0230670-mRNA-1 |
| chr2_2 | three_prime_UTR | 2835812 | 2835847 | 2835812 | ID=Msa0230670-mRNA-1:three_prime_utr;Parent=Msa0230670-mRNA-1 |
| chr2_2 | three_prime_UTR | 2835559 | 2835776 | 2835559 | ID=Msa0230670-mRNA-1:three_prime_utr;Parent=Msa0230670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
