Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0236890 | XP_003593922.1 | 94.350 | 354 | 2 | 1 | 1 | 354 | 1 | 336 | 0.0 | 680 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0236890 | sp|Q9XG83|G2OX_PHACN | 76.068 | 351 | 62 | 4 | 1 | 351 | 1 | 329 | 0.0 | 534 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0236890 | G7IPV5 | 94.350 | 354 | 2 | 1 | 1 | 354 | 1 | 336 | 0.0 | 680 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0164380 | Msa0236890 | 0.885588 | 7.145858e-72 | -8.615850e-47 |
Msa0194800 | Msa0236890 | 0.911902 | 3.592736e-83 | -8.615850e-47 |
Msa0236890 | Msa0315330 | 0.816830 | 4.516877e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0236890 | MtrunA17_Chr2g0285931 | 94.350 | 354 | 2 | 1 | 1 | 354 | 1 | 336 | 0.0 | 680 |
Msa0236890 | MtrunA17_Chr4g0052251 | 66.761 | 352 | 95 | 4 | 1 | 350 | 1 | 332 | 2.57e-172 | 482 |
Msa0236890 | MtrunA17_Chr2g0313111 | 59.143 | 350 | 117 | 4 | 1 | 350 | 1 | 324 | 3.23e-152 | 431 |
Msa0236890 | MtrunA17_Chr8g0358941 | 54.701 | 351 | 139 | 3 | 1 | 350 | 1 | 332 | 6.57e-133 | 382 |
Msa0236890 | MtrunA17_Chr1g0194321 | 48.036 | 331 | 146 | 3 | 27 | 349 | 19 | 331 | 7.08e-106 | 314 |
Msa0236890 | MtrunA17_Chr4g0068891 | 44.136 | 324 | 153 | 5 | 28 | 348 | 20 | 318 | 3.25e-91 | 276 |
Msa0236890 | MtrunA17_Chr2g0293931 | 43.056 | 216 | 101 | 4 | 136 | 349 | 8 | 203 | 1.26e-53 | 176 |
Msa0236890 | MtrunA17_Chr2g0332191 | 31.503 | 346 | 196 | 8 | 9 | 345 | 37 | 350 | 7.76e-47 | 163 |
Msa0236890 | MtrunA17_Chr5g0423191 | 30.395 | 329 | 189 | 9 | 21 | 340 | 40 | 337 | 1.71e-44 | 156 |
Msa0236890 | MtrunA17_Chr5g0423251 | 30.395 | 329 | 189 | 10 | 21 | 340 | 40 | 337 | 5.42e-43 | 152 |
Msa0236890 | MtrunA17_Chr5g0420941 | 29.254 | 335 | 185 | 10 | 21 | 340 | 38 | 335 | 7.50e-42 | 149 |
Msa0236890 | MtrunA17_Chr8g0345831 | 29.909 | 331 | 186 | 8 | 23 | 341 | 37 | 333 | 5.31e-41 | 147 |
Msa0236890 | MtrunA17_Chr5g0421041 | 31.003 | 329 | 185 | 11 | 21 | 340 | 40 | 335 | 7.18e-41 | 146 |
Msa0236890 | MtrunA17_Chr4g0045411 | 31.454 | 337 | 181 | 9 | 19 | 334 | 21 | 328 | 9.31e-41 | 146 |
Msa0236890 | MtrunA17_Chr5g0420951 | 29.091 | 330 | 193 | 10 | 21 | 340 | 46 | 344 | 7.31e-40 | 144 |
Msa0236890 | MtrunA17_Chr8g0365241 | 29.341 | 334 | 195 | 11 | 17 | 340 | 46 | 348 | 4.61e-39 | 142 |
Msa0236890 | MtrunA17_Chr8g0375601 | 29.565 | 345 | 186 | 11 | 15 | 340 | 35 | 341 | 1.27e-38 | 141 |
Msa0236890 | MtrunA17_Chr5g0420981 | 28.182 | 330 | 196 | 10 | 21 | 340 | 46 | 344 | 1.37e-38 | 140 |
Msa0236890 | MtrunA17_Chr7g0242551 | 30.189 | 318 | 181 | 10 | 28 | 332 | 54 | 343 | 1.65e-38 | 140 |
Msa0236890 | MtrunA17_Chr2g0296371 | 31.629 | 313 | 174 | 10 | 45 | 350 | 76 | 355 | 4.82e-38 | 139 |
Msa0236890 | MtrunA17_Chr1g0162351 | 29.885 | 348 | 187 | 11 | 10 | 328 | 49 | 368 | 1.78e-36 | 136 |
Msa0236890 | MtrunA17_Chr4g0045431 | 30.145 | 345 | 184 | 12 | 12 | 328 | 8 | 323 | 3.10e-36 | 134 |
Msa0236890 | MtrunA17_Chr5g0437181 | 28.529 | 340 | 192 | 12 | 6 | 332 | 36 | 337 | 4.07e-36 | 134 |
Msa0236890 | MtrunA17_Chr3g0113641 | 29.245 | 318 | 183 | 11 | 28 | 332 | 50 | 338 | 4.65e-36 | 134 |
Msa0236890 | MtrunA17_Chr8g0375571 | 26.347 | 334 | 200 | 10 | 21 | 340 | 38 | 339 | 1.20e-35 | 132 |
Msa0236890 | MtrunA17_Chr3g0128001 | 28.274 | 336 | 195 | 11 | 16 | 340 | 26 | 326 | 1.33e-35 | 132 |
Msa0236890 | MtrunA17_Chr5g0412671 | 29.261 | 352 | 192 | 10 | 10 | 339 | 17 | 333 | 1.96e-35 | 132 |
Msa0236890 | MtrunA17_Chr4g0045471 | 28.657 | 335 | 187 | 10 | 19 | 328 | 17 | 324 | 1.97e-35 | 132 |
Msa0236890 | MtrunA17_Chr4g0045451 | 29.855 | 345 | 185 | 12 | 12 | 328 | 8 | 323 | 2.08e-35 | 132 |
Msa0236890 | MtrunA17_Chr5g0421011 | 28.571 | 329 | 195 | 11 | 21 | 340 | 40 | 337 | 2.52e-35 | 132 |
Msa0236890 | MtrunA17_Chr1g0162321 | 29.023 | 348 | 190 | 11 | 10 | 328 | 49 | 368 | 8.41e-35 | 131 |
Msa0236890 | MtrunA17_Chr5g0420901 | 27.356 | 329 | 199 | 9 | 21 | 340 | 39 | 336 | 9.25e-35 | 130 |
Msa0236890 | MtrunA17_Chr5g0412681 | 28.571 | 322 | 192 | 7 | 22 | 336 | 27 | 317 | 1.48e-34 | 129 |
Msa0236890 | MtrunA17_Chr4g0045441 | 27.614 | 373 | 203 | 14 | 12 | 346 | 8 | 351 | 2.23e-34 | 129 |
Msa0236890 | MtrunA17_Chr5g0423211 | 26.970 | 330 | 201 | 10 | 21 | 340 | 40 | 339 | 3.46e-34 | 129 |
Msa0236890 | MtrunA17_Chr4g0006371 | 28.931 | 318 | 185 | 9 | 28 | 332 | 62 | 351 | 3.60e-34 | 129 |
Msa0236890 | MtrunA17_Chr3g0130391 | 29.915 | 351 | 185 | 13 | 20 | 341 | 52 | 370 | 3.62e-34 | 129 |
Msa0236890 | MtrunA17_Chr6g0474391 | 27.027 | 333 | 194 | 12 | 28 | 340 | 64 | 367 | 4.85e-34 | 129 |
Msa0236890 | MtrunA17_Chr5g0423201 | 27.273 | 330 | 199 | 10 | 21 | 340 | 40 | 338 | 5.76e-34 | 128 |
Msa0236890 | MtrunA17_Chr8g0384461 | 29.003 | 331 | 189 | 12 | 28 | 342 | 47 | 347 | 6.94e-34 | 128 |
Msa0236890 | MtrunA17_Chr8g0375671 | 28.228 | 333 | 195 | 10 | 21 | 340 | 45 | 346 | 7.51e-34 | 128 |
Msa0236890 | MtrunA17_Chr2g0314381 | 29.321 | 324 | 187 | 11 | 28 | 340 | 77 | 369 | 8.04e-34 | 128 |
Msa0236890 | MtrunA17_Chr5g0412651 | 28.490 | 351 | 194 | 11 | 11 | 339 | 18 | 333 | 1.09e-33 | 127 |
Msa0236890 | MtrunA17_Chr3g0125201 | 29.595 | 321 | 174 | 12 | 27 | 331 | 2 | 286 | 1.22e-33 | 126 |
Msa0236890 | MtrunA17_Chr1g0162191 | 29.524 | 315 | 166 | 12 | 28 | 324 | 47 | 323 | 1.75e-33 | 127 |
Msa0236890 | MtrunA17_Chr6g0455481 | 29.338 | 317 | 187 | 9 | 28 | 337 | 42 | 328 | 1.91e-33 | 126 |
Msa0236890 | MtrunA17_Chr8g0351101 | 29.607 | 331 | 183 | 13 | 28 | 338 | 54 | 354 | 2.63e-33 | 127 |
Msa0236890 | MtrunA17_Chr7g0239821 | 28.000 | 300 | 181 | 10 | 45 | 340 | 86 | 354 | 2.90e-33 | 127 |
Msa0236890 | MtrunA17_Chr1g0204181 | 29.179 | 329 | 188 | 12 | 24 | 340 | 67 | 362 | 3.55e-33 | 126 |
Msa0236890 | MtrunA17_Chr5g0423221 | 28.994 | 338 | 198 | 12 | 14 | 342 | 59 | 363 | 3.60e-33 | 126 |
Msa0236890 | MtrunA17_Chr5g0421091 | 28.333 | 300 | 181 | 8 | 45 | 340 | 67 | 336 | 3.91e-33 | 126 |
Msa0236890 | MtrunA17_Chr7g0220011 | 30.351 | 313 | 176 | 12 | 28 | 331 | 39 | 318 | 1.30e-32 | 124 |
Msa0236890 | MtrunA17_Chr5g0424211 | 27.673 | 318 | 187 | 9 | 12 | 315 | 22 | 310 | 1.66e-32 | 124 |
Msa0236890 | MtrunA17_Chr4g0066121 | 28.869 | 336 | 183 | 13 | 28 | 346 | 60 | 356 | 2.61e-32 | 124 |
Msa0236890 | MtrunA17_Chr8g0375701 | 28.182 | 330 | 192 | 10 | 22 | 340 | 49 | 344 | 2.78e-32 | 124 |
Msa0236890 | MtrunA17_Chr7g0239111 | 27.129 | 317 | 191 | 10 | 24 | 331 | 51 | 336 | 3.55e-32 | 124 |
Msa0236890 | MtrunA17_Chr5g0424201 | 26.807 | 332 | 202 | 10 | 12 | 331 | 24 | 326 | 6.31e-32 | 122 |
Msa0236890 | MtrunA17_Chr3g0087031 | 29.275 | 345 | 190 | 13 | 12 | 342 | 48 | 352 | 7.02e-32 | 122 |
Msa0236890 | MtrunA17_Chr1g0148771 | 28.671 | 286 | 171 | 6 | 28 | 310 | 63 | 318 | 7.34e-32 | 122 |
Msa0236890 | MtrunA17_Chr1g0184161 | 26.727 | 333 | 189 | 11 | 26 | 342 | 36 | 329 | 1.29e-31 | 122 |
Msa0236890 | MtrunA17_Chr7g0239101 | 28.076 | 317 | 188 | 10 | 24 | 331 | 51 | 336 | 1.73e-31 | 121 |
Msa0236890 | MtrunA17_Chr1g0162361 | 29.191 | 346 | 175 | 12 | 6 | 327 | 15 | 314 | 2.08e-31 | 121 |
Msa0236890 | MtrunA17_Chr1g0191201 | 28.710 | 310 | 184 | 8 | 41 | 342 | 75 | 355 | 2.65e-31 | 121 |
Msa0236890 | MtrunA17_Chr5g0420721 | 29.104 | 268 | 155 | 9 | 77 | 340 | 3 | 239 | 2.88e-31 | 119 |
Msa0236890 | MtrunA17_Chr3g0126741 | 27.492 | 331 | 191 | 10 | 28 | 344 | 59 | 354 | 2.88e-31 | 121 |
Msa0236890 | MtrunA17_Chr3g0093751 | 27.381 | 336 | 183 | 10 | 15 | 331 | 41 | 334 | 3.89e-31 | 120 |
Msa0236890 | MtrunA17_Chr5g0421101 | 26.269 | 335 | 195 | 11 | 21 | 340 | 40 | 337 | 4.09e-31 | 120 |
Msa0236890 | MtrunA17_Chr3g0114861 | 29.499 | 339 | 194 | 12 | 12 | 337 | 21 | 327 | 4.84e-31 | 120 |
Msa0236890 | MtrunA17_Chr1g0184121 | 28.754 | 313 | 182 | 9 | 28 | 330 | 37 | 318 | 2.11e-30 | 118 |
Msa0236890 | MtrunA17_Chr2g0311631 | 28.296 | 311 | 168 | 9 | 42 | 336 | 75 | 346 | 2.57e-30 | 119 |
Msa0236890 | MtrunA17_Chr7g0220001 | 28.485 | 330 | 182 | 13 | 16 | 330 | 29 | 319 | 3.43e-30 | 117 |
Msa0236890 | MtrunA17_Chr5g0405411 | 27.301 | 326 | 191 | 11 | 26 | 337 | 37 | 330 | 4.04e-30 | 118 |
Msa0236890 | MtrunA17_Chr8g0370711 | 26.623 | 308 | 185 | 9 | 28 | 324 | 52 | 329 | 4.80e-30 | 117 |
Msa0236890 | MtrunA17_Chr3g0093761 | 26.866 | 335 | 185 | 11 | 15 | 331 | 41 | 333 | 6.09e-30 | 117 |
Msa0236890 | MtrunA17_Chr2g0319491 | 26.791 | 321 | 174 | 11 | 28 | 333 | 33 | 307 | 9.16e-30 | 116 |
Msa0236890 | MtrunA17_Chr3g0121141 | 27.160 | 324 | 176 | 12 | 25 | 331 | 1 | 281 | 1.31e-29 | 115 |
Msa0236890 | MtrunA17_Chr8g0371921 | 28.522 | 291 | 174 | 7 | 25 | 311 | 44 | 304 | 1.45e-29 | 116 |
Msa0236890 | MtrunA17_Chr2g0314401 | 25.667 | 300 | 188 | 9 | 45 | 340 | 75 | 343 | 1.97e-29 | 116 |
Msa0236890 | MtrunA17_Chr1g0184151 | 24.855 | 346 | 203 | 10 | 11 | 337 | 18 | 325 | 2.09e-29 | 115 |
Msa0236890 | MtrunA17_Chr3g0125421 | 28.875 | 329 | 187 | 10 | 29 | 338 | 37 | 337 | 2.22e-29 | 116 |
Msa0236890 | MtrunA17_Chr8g0370721 | 27.425 | 299 | 176 | 10 | 28 | 315 | 52 | 320 | 2.46e-29 | 115 |
Msa0236890 | MtrunA17_Chr8g0371931 | 28.866 | 291 | 173 | 8 | 25 | 311 | 44 | 304 | 3.02e-29 | 115 |
Msa0236890 | MtrunA17_Chr2g0311921 | 28.611 | 360 | 199 | 16 | 3 | 342 | 27 | 348 | 3.41e-29 | 115 |
Msa0236890 | MtrunA17_Chr3g0145181 | 26.246 | 301 | 186 | 9 | 29 | 324 | 60 | 329 | 4.10e-29 | 115 |
Msa0236890 | MtrunA17_Chr3g0092531 | 28.660 | 321 | 177 | 11 | 28 | 333 | 6 | 289 | 4.65e-29 | 114 |
Msa0236890 | MtrunA17_Chr1g0187811 | 27.616 | 344 | 185 | 12 | 28 | 345 | 188 | 493 | 1.03e-28 | 116 |
Msa0236890 | MtrunA17_Chr1g0184111 | 28.025 | 314 | 185 | 9 | 28 | 331 | 37 | 319 | 1.60e-28 | 113 |
Msa0236890 | MtrunA17_Chr1g0184101 | 26.786 | 336 | 201 | 8 | 26 | 349 | 36 | 338 | 1.85e-28 | 113 |
Msa0236890 | MtrunA17_Chr3g0093741 | 26.190 | 336 | 187 | 10 | 15 | 331 | 41 | 334 | 1.90e-28 | 113 |
Msa0236890 | MtrunA17_Chr7g0239121 | 27.273 | 319 | 189 | 11 | 24 | 331 | 47 | 333 | 2.55e-28 | 113 |
Msa0236890 | MtrunA17_Chr3g0109041 | 27.052 | 329 | 187 | 13 | 28 | 336 | 42 | 337 | 2.59e-28 | 113 |
Msa0236890 | MtrunA17_Chr1g0187821 | 27.841 | 352 | 174 | 12 | 27 | 345 | 66 | 370 | 3.82e-28 | 112 |
Msa0236890 | MtrunA17_Chr8g0384481 | 28.571 | 329 | 192 | 11 | 28 | 342 | 59 | 358 | 5.82e-28 | 112 |
Msa0236890 | MtrunA17_Chr8g0336861 | 29.464 | 336 | 181 | 14 | 26 | 342 | 58 | 356 | 5.83e-28 | 112 |
Msa0236890 | MtrunA17_Chr5g0426891 | 25.496 | 353 | 204 | 13 | 10 | 341 | 18 | 332 | 6.17e-28 | 111 |
Msa0236890 | MtrunA17_Chr5g0398291 | 26.562 | 320 | 190 | 10 | 28 | 331 | 47 | 337 | 6.18e-28 | 112 |
Msa0236890 | MtrunA17_Chr8g0348081 | 28.615 | 325 | 171 | 13 | 28 | 331 | 60 | 344 | 6.25e-28 | 112 |
Msa0236890 | MtrunA17_Chr5g0439011 | 27.019 | 322 | 176 | 9 | 25 | 333 | 13 | 288 | 6.79e-28 | 111 |
Msa0236890 | MtrunA17_Chr6g0472861 | 28.152 | 341 | 190 | 13 | 17 | 340 | 60 | 362 | 7.96e-28 | 112 |
Msa0236890 | MtrunA17_Chr3g0145201 | 26.045 | 311 | 186 | 10 | 28 | 324 | 684 | 964 | 2.44e-27 | 113 |
Msa0236890 | MtrunA17_Chr2g0289341 | 26.959 | 319 | 189 | 11 | 25 | 333 | 1 | 285 | 2.57e-27 | 109 |
Msa0236890 | MtrunA17_Chr1g0167951 | 27.564 | 312 | 177 | 12 | 28 | 325 | 53 | 329 | 2.81e-27 | 110 |
Msa0236890 | MtrunA17_Chr4g0055591 | 27.778 | 342 | 191 | 13 | 7 | 330 | 37 | 340 | 4.07e-27 | 110 |
Msa0236890 | MtrunA17_Chr2g0314391 | 26.333 | 300 | 186 | 9 | 45 | 340 | 94 | 362 | 4.18e-27 | 110 |
Msa0236890 | MtrunA17_Chr3g0102041 | 27.852 | 298 | 173 | 9 | 26 | 311 | 37 | 304 | 5.26e-27 | 109 |
Msa0236890 | MtrunA17_Chr8g0375681 | 27.946 | 297 | 167 | 9 | 54 | 340 | 15 | 274 | 6.73e-27 | 107 |
Msa0236890 | MtrunA17_Chr4g0045461 | 29.885 | 348 | 190 | 12 | 19 | 340 | 15 | 334 | 1.07e-26 | 108 |
Msa0236890 | MtrunA17_Chr4g0064781 | 28.302 | 318 | 183 | 11 | 18 | 324 | 40 | 323 | 1.09e-26 | 108 |
Msa0236890 | MtrunA17_Chr1g0187831 | 27.100 | 369 | 208 | 14 | 7 | 354 | 50 | 378 | 3.45e-26 | 107 |
Msa0236890 | MtrunA17_Chr8g0336751 | 27.660 | 329 | 168 | 12 | 28 | 331 | 94 | 377 | 4.12e-26 | 107 |
Msa0236890 | MtrunA17_Chr2g0311831 | 27.576 | 330 | 181 | 13 | 21 | 331 | 61 | 351 | 4.18e-26 | 107 |
Msa0236890 | MtrunA17_Chr8g0336851 | 27.812 | 320 | 180 | 11 | 28 | 331 | 60 | 344 | 4.41e-26 | 107 |
Msa0236890 | MtrunA17_Chr8g0336781 | 27.879 | 330 | 182 | 13 | 21 | 331 | 88 | 380 | 4.93e-26 | 107 |
Msa0236890 | MtrunA17_Chr1g0167911 | 26.875 | 320 | 181 | 11 | 28 | 331 | 54 | 336 | 5.10e-26 | 106 |
Msa0236890 | MtrunA17_Chr1g0179801 | 26.250 | 320 | 191 | 10 | 28 | 331 | 66 | 356 | 5.34e-26 | 107 |
Msa0236890 | MtrunA17_Chr2g0293941 | 48.515 | 101 | 50 | 1 | 28 | 126 | 19 | 119 | 1.30e-25 | 101 |
Msa0236890 | MtrunA17_Chr8g0336761 | 26.727 | 333 | 188 | 10 | 28 | 342 | 60 | 354 | 2.42e-25 | 105 |
Msa0236890 | MtrunA17_Chr2g0311861 | 28.144 | 334 | 175 | 14 | 21 | 342 | 57 | 337 | 2.93e-25 | 104 |
Msa0236890 | MtrunA17_Chr7g0232161 | 29.804 | 255 | 138 | 11 | 45 | 293 | 82 | 301 | 3.49e-25 | 103 |
Msa0236890 | MtrunA17_Chr3g0114871 | 29.297 | 256 | 156 | 10 | 12 | 254 | 22 | 265 | 4.41e-25 | 102 |
Msa0236890 | MtrunA17_Chr7g0250511 | 25.672 | 335 | 202 | 10 | 12 | 331 | 29 | 331 | 6.74e-25 | 103 |
Msa0236890 | MtrunA17_Chr4g0050031 | 25.305 | 328 | 196 | 10 | 28 | 340 | 62 | 355 | 6.83e-25 | 103 |
Msa0236890 | MtrunA17_Chr3g0145171 | 26.266 | 316 | 191 | 11 | 20 | 324 | 45 | 329 | 7.61e-25 | 103 |
Msa0236890 | MtrunA17_Chr1g0167961 | 26.837 | 313 | 179 | 11 | 28 | 325 | 69 | 346 | 8.39e-25 | 103 |
Msa0236890 | MtrunA17_Chr2g0311761 | 27.248 | 367 | 170 | 17 | 21 | 345 | 61 | 372 | 3.96e-24 | 101 |
Msa0236890 | MtrunA17_Chr8g0336631 | 25.926 | 324 | 182 | 10 | 28 | 331 | 60 | 345 | 5.60e-24 | 101 |
Msa0236890 | MtrunA17_Chr7g0239091 | 27.243 | 301 | 172 | 11 | 45 | 340 | 182 | 440 | 6.35e-24 | 102 |
Msa0236890 | MtrunA17_Chr7g0225881 | 26.586 | 331 | 190 | 11 | 28 | 342 | 67 | 360 | 1.85e-23 | 99.8 |
Msa0236890 | MtrunA17_Chr2g0311701 | 23.967 | 363 | 184 | 11 | 28 | 352 | 69 | 377 | 2.55e-23 | 99.8 |
Msa0236890 | MtrunA17_Chr7g0266651 | 27.059 | 340 | 191 | 13 | 15 | 337 | 49 | 348 | 3.45e-23 | 99.0 |
Msa0236890 | MtrunA17_Chr4g0011311 | 28.244 | 262 | 152 | 10 | 28 | 273 | 67 | 308 | 5.82e-23 | 97.4 |
Msa0236890 | MtrunA17_Chr7g0247741 | 27.463 | 335 | 192 | 13 | 28 | 350 | 11 | 306 | 5.98e-23 | 97.8 |
Msa0236890 | MtrunA17_Chr7g0265221 | 25.243 | 309 | 179 | 10 | 28 | 315 | 67 | 344 | 1.65e-22 | 97.4 |
Msa0236890 | MtrunA17_Chr1g0184241 | 26.006 | 323 | 190 | 11 | 21 | 331 | 62 | 347 | 2.42e-22 | 96.7 |
Msa0236890 | MtrunA17_Chr8g0364471 | 25.982 | 331 | 186 | 13 | 21 | 331 | 62 | 353 | 5.31e-22 | 95.9 |
Msa0236890 | MtrunA17_Chr7g0239071 | 25.597 | 293 | 176 | 10 | 46 | 331 | 24 | 281 | 6.59e-22 | 94.7 |
Msa0236890 | MtrunA17_Chr3g0105281 | 26.006 | 323 | 173 | 13 | 28 | 335 | 34 | 305 | 6.79e-22 | 94.7 |
Msa0236890 | MtrunA17_Chr8g0354261 | 26.791 | 321 | 174 | 12 | 45 | 345 | 95 | 374 | 8.03e-22 | 95.5 |
Msa0236890 | MtrunA17_Chr3g0082731 | 40.310 | 129 | 63 | 4 | 28 | 153 | 20 | 137 | 8.98e-22 | 90.1 |
Msa0236890 | MtrunA17_Chr7g0235951 | 23.529 | 323 | 192 | 11 | 28 | 331 | 67 | 353 | 1.21e-21 | 94.7 |
Msa0236890 | MtrunA17_Chr2g0311711 | 26.154 | 325 | 179 | 13 | 28 | 331 | 67 | 351 | 1.30e-21 | 94.7 |
Msa0236890 | MtrunA17_Chr2g0314371 | 25.385 | 260 | 152 | 11 | 28 | 256 | 52 | 300 | 4.78e-21 | 92.4 |
Msa0236890 | MtrunA17_Chr8g0348951 | 24.269 | 342 | 195 | 12 | 28 | 350 | 10 | 306 | 5.11e-21 | 92.4 |
Msa0236890 | MtrunA17_Chr2g0311741 | 24.927 | 341 | 198 | 9 | 27 | 349 | 26 | 326 | 6.73e-21 | 92.0 |
Msa0236890 | MtrunA17_Chr7g0265351 | 24.501 | 351 | 193 | 13 | 10 | 331 | 10 | 317 | 7.33e-21 | 92.0 |
Msa0236890 | MtrunA17_Chr7g0247991 | 25.439 | 342 | 199 | 13 | 28 | 349 | 67 | 372 | 4.60e-20 | 90.1 |
Msa0236890 | MtrunA17_Chr1g0161041 | 25.779 | 353 | 184 | 12 | 20 | 340 | 78 | 384 | 1.79e-19 | 89.0 |
Msa0236890 | MtrunA17_Chr8g0354241 | 28.523 | 298 | 158 | 12 | 42 | 325 | 92 | 348 | 2.85e-19 | 88.2 |
Msa0236890 | MtrunA17_Chr1g0161081 | 25.588 | 340 | 191 | 13 | 28 | 348 | 73 | 369 | 1.42e-18 | 85.9 |
Msa0236890 | MtrunA17_Chr5g0420881 | 29.560 | 159 | 85 | 4 | 183 | 340 | 1 | 133 | 1.61e-18 | 81.3 |
Msa0236890 | MtrunA17_Chr5g0394071 | 27.941 | 204 | 104 | 9 | 136 | 335 | 3 | 167 | 1.72e-18 | 82.4 |
Msa0236890 | MtrunA17_Chr6g0486831 | 27.011 | 348 | 197 | 8 | 23 | 345 | 19 | 334 | 2.41e-18 | 84.7 |
Msa0236890 | MtrunA17_Chr7g0233661 | 31.447 | 159 | 76 | 5 | 178 | 335 | 15 | 141 | 3.32e-18 | 80.9 |
Msa0236890 | MtrunA17_Chr4g0075471 | 31.325 | 166 | 85 | 5 | 171 | 333 | 17 | 156 | 4.80e-18 | 80.5 |
Msa0236890 | MtrunA17_Chr4g0053251 | 23.780 | 328 | 167 | 11 | 25 | 311 | 5 | 290 | 4.84e-18 | 84.0 |
Msa0236890 | MtrunA17_Chr8g0335411 | 25.364 | 343 | 198 | 14 | 28 | 349 | 67 | 372 | 8.54e-18 | 83.6 |
Msa0236890 | MtrunA17_Chr4g0066991 | 25.074 | 339 | 184 | 14 | 28 | 349 | 67 | 352 | 1.37e-17 | 82.8 |
Msa0236890 | MtrunA17_Chr8g0362741 | 25.287 | 261 | 129 | 8 | 28 | 265 | 67 | 284 | 1.42e-17 | 82.0 |
Msa0236890 | MtrunA17_Chr7g0235981 | 32.934 | 167 | 81 | 5 | 134 | 299 | 133 | 269 | 1.96e-17 | 82.0 |
Msa0236890 | MtrunA17_Chr1g0158011 | 27.670 | 206 | 122 | 4 | 130 | 334 | 65 | 244 | 2.05e-17 | 80.9 |
Msa0236890 | MtrunA17_Chr6g0488511 | 23.333 | 300 | 185 | 10 | 27 | 315 | 2 | 267 | 2.40e-17 | 81.6 |
Msa0236890 | MtrunA17_Chr1g0161111 | 24.847 | 326 | 195 | 13 | 28 | 340 | 132 | 420 | 3.46e-17 | 82.4 |
Msa0236890 | MtrunA17_Chr3g0126761 | 30.247 | 162 | 86 | 4 | 183 | 344 | 91 | 225 | 5.08e-17 | 79.3 |
Msa0236890 | MtrunA17_Chr7g0236011 | 25.146 | 342 | 200 | 12 | 28 | 349 | 67 | 372 | 1.53e-16 | 80.1 |
Msa0236890 | MtrunA17_Chr5g0407781 | 25.526 | 333 | 177 | 12 | 28 | 340 | 5 | 286 | 5.47e-15 | 74.7 |
Msa0236890 | MtrunA17_Chr8g0364171 | 28.859 | 149 | 93 | 4 | 118 | 265 | 1 | 137 | 8.80e-15 | 70.9 |
Msa0236890 | MtrunA17_Chr4g0055911 | 26.510 | 298 | 164 | 14 | 27 | 303 | 8 | 271 | 1.16e-14 | 73.9 |
Msa0236890 | MtrunA17_Chr4g0055871 | 25.503 | 298 | 160 | 14 | 28 | 303 | 9 | 266 | 5.59e-14 | 72.0 |
Msa0236890 | MtrunA17_Chr3g0092581 | 27.368 | 190 | 108 | 6 | 145 | 333 | 1 | 161 | 1.22e-13 | 68.9 |
Msa0236890 | MtrunA17_Chr8g0389941 | 25.510 | 294 | 169 | 11 | 31 | 302 | 37 | 302 | 4.20e-13 | 69.7 |
Msa0236890 | MtrunA17_Chr3g0138351 | 25.210 | 238 | 143 | 9 | 116 | 348 | 107 | 314 | 4.44e-13 | 69.3 |
Msa0236890 | MtrunA17_Chr4g0004061 | 20.447 | 313 | 198 | 9 | 38 | 339 | 29 | 301 | 8.31e-13 | 68.6 |
Msa0236890 | MtrunA17_Chr4g0004071 | 22.222 | 306 | 199 | 9 | 38 | 339 | 29 | 299 | 1.54e-12 | 67.8 |
Msa0236890 | MtrunA17_Chr1g0158021 | 25.000 | 220 | 128 | 8 | 38 | 246 | 68 | 261 | 1.73e-12 | 66.6 |
Msa0236890 | MtrunA17_Chr8g0336801 | 29.139 | 151 | 78 | 4 | 184 | 331 | 12 | 136 | 2.79e-12 | 64.3 |
Msa0236890 | MtrunA17_Chr1g0170631 | 26.768 | 198 | 115 | 6 | 135 | 331 | 3 | 171 | 3.29e-12 | 65.1 |
Msa0236890 | MtrunA17_Chr4g0064771 | 27.619 | 210 | 114 | 8 | 129 | 332 | 22 | 199 | 2.98e-11 | 62.4 |
Msa0236890 | MtrunA17_Chr8g0336831 | 29.444 | 180 | 100 | 8 | 28 | 191 | 60 | 228 | 6.54e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0236890 | AT1G30040.1 | 59.887 | 354 | 117 | 5 | 1 | 351 | 1 | 332 | 6.21e-151 | 429 |
Msa0236890 | AT2G34555.1 | 53.693 | 352 | 135 | 4 | 1 | 350 | 1 | 326 | 3.46e-131 | 378 |
Msa0236890 | AT1G78440.1 | 53.714 | 350 | 133 | 4 | 1 | 350 | 1 | 321 | 8.31e-130 | 375 |
Msa0236890 | AT1G30040.2 | 61.089 | 257 | 93 | 4 | 1 | 254 | 1 | 253 | 2.73e-110 | 323 |
Msa0236890 | AT1G02400.1 | 44.785 | 326 | 154 | 4 | 28 | 349 | 24 | 327 | 1.98e-93 | 282 |
Msa0236890 | AT1G47990.1 | 43.314 | 344 | 158 | 9 | 14 | 348 | 1 | 316 | 1.06e-84 | 259 |
Msa0236890 | AT1G02400.2 | 46.288 | 229 | 116 | 2 | 29 | 254 | 25 | 249 | 1.95e-69 | 218 |
Msa0236890 | AT1G15550.1 | 31.105 | 344 | 198 | 9 | 10 | 344 | 40 | 353 | 2.14e-45 | 159 |
Msa0236890 | AT5G08640.2 | 31.231 | 333 | 188 | 9 | 11 | 331 | 22 | 325 | 3.87e-45 | 158 |
Msa0236890 | AT5G08640.1 | 31.231 | 333 | 188 | 9 | 11 | 331 | 22 | 325 | 3.87e-45 | 158 |
Msa0236890 | AT2G38240.1 | 31.210 | 314 | 178 | 10 | 28 | 332 | 48 | 332 | 1.37e-42 | 151 |
Msa0236890 | AT1G80330.1 | 29.560 | 318 | 187 | 8 | 28 | 336 | 49 | 338 | 1.20e-40 | 146 |
Msa0236890 | AT1G80340.1 | 29.755 | 326 | 191 | 8 | 28 | 344 | 50 | 346 | 3.78e-39 | 142 |
Msa0236890 | AT3G55970.1 | 29.664 | 327 | 187 | 10 | 20 | 333 | 47 | 343 | 9.34e-39 | 142 |
Msa0236890 | AT1G78550.1 | 29.217 | 332 | 189 | 11 | 22 | 340 | 47 | 345 | 1.80e-38 | 140 |
Msa0236890 | AT4G25420.1 | 28.729 | 362 | 205 | 13 | 1 | 340 | 33 | 363 | 9.91e-38 | 139 |
Msa0236890 | AT4G10500.1 | 28.267 | 329 | 189 | 11 | 26 | 341 | 42 | 336 | 3.95e-37 | 137 |
Msa0236890 | AT5G07200.1 | 29.630 | 351 | 184 | 14 | 19 | 340 | 48 | 364 | 4.28e-37 | 137 |
Msa0236890 | AT5G63590.1 | 29.299 | 314 | 184 | 10 | 28 | 332 | 14 | 298 | 1.63e-36 | 134 |
Msa0236890 | AT5G51810.1 | 29.971 | 347 | 194 | 15 | 10 | 338 | 44 | 359 | 3.99e-36 | 135 |
Msa0236890 | AT1G17020.1 | 28.000 | 325 | 192 | 10 | 28 | 340 | 53 | 347 | 7.98e-36 | 134 |
Msa0236890 | AT3G11180.2 | 27.928 | 333 | 194 | 10 | 17 | 332 | 76 | 379 | 1.98e-35 | 134 |
Msa0236890 | AT5G24530.1 | 29.179 | 329 | 186 | 11 | 25 | 340 | 35 | 329 | 2.05e-35 | 132 |
Msa0236890 | AT3G11180.1 | 27.928 | 333 | 194 | 10 | 17 | 332 | 76 | 379 | 2.78e-35 | 133 |
Msa0236890 | AT5G05600.1 | 27.485 | 342 | 198 | 12 | 10 | 332 | 40 | 350 | 5.94e-35 | 132 |
Msa0236890 | AT3G13610.1 | 27.666 | 347 | 172 | 11 | 27 | 343 | 61 | 358 | 8.26e-35 | 131 |
Msa0236890 | AT4G25310.1 | 29.900 | 301 | 172 | 11 | 45 | 340 | 76 | 342 | 3.73e-34 | 129 |
Msa0236890 | AT4G16330.2 | 28.213 | 319 | 185 | 13 | 28 | 337 | 67 | 350 | 5.56e-34 | 129 |
Msa0236890 | AT5G63600.2 | 28.866 | 291 | 173 | 8 | 28 | 314 | 33 | 293 | 9.78e-34 | 127 |
Msa0236890 | AT1G44090.1 | 30.523 | 344 | 182 | 14 | 12 | 333 | 48 | 356 | 1.60e-33 | 128 |
Msa0236890 | AT5G63600.1 | 28.866 | 291 | 172 | 9 | 28 | 314 | 33 | 292 | 1.80e-33 | 126 |
Msa0236890 | AT1G60980.1 | 29.464 | 336 | 182 | 14 | 28 | 340 | 57 | 360 | 1.88e-33 | 127 |
Msa0236890 | AT3G12900.1 | 27.987 | 318 | 175 | 10 | 28 | 331 | 59 | 336 | 2.23e-33 | 127 |
Msa0236890 | AT3G19010.1 | 29.503 | 322 | 177 | 11 | 28 | 328 | 28 | 320 | 2.32e-33 | 127 |
Msa0236890 | AT3G19010.4 | 29.503 | 322 | 177 | 11 | 28 | 328 | 28 | 320 | 2.32e-33 | 127 |
Msa0236890 | AT4G25300.1 | 28.267 | 329 | 193 | 11 | 24 | 340 | 48 | 345 | 3.70e-33 | 126 |
Msa0236890 | AT2G36690.2 | 29.787 | 329 | 185 | 10 | 16 | 331 | 51 | 346 | 5.61e-33 | 126 |
Msa0236890 | AT2G36690.1 | 29.787 | 329 | 185 | 10 | 16 | 331 | 51 | 346 | 5.61e-33 | 126 |
Msa0236890 | AT1G17010.1 | 27.576 | 330 | 194 | 12 | 24 | 340 | 50 | 347 | 1.10e-32 | 125 |
Msa0236890 | AT3G19000.1 | 29.107 | 347 | 187 | 12 | 12 | 328 | 8 | 325 | 1.67e-32 | 124 |
Msa0236890 | AT1G78550.2 | 28.136 | 295 | 175 | 9 | 51 | 340 | 5 | 267 | 3.44e-32 | 122 |
Msa0236890 | AT4G21690.1 | 26.531 | 343 | 204 | 13 | 19 | 344 | 37 | 348 | 1.75e-31 | 122 |
Msa0236890 | AT1G55290.1 | 27.190 | 331 | 173 | 10 | 28 | 336 | 62 | 346 | 1.82e-31 | 122 |
Msa0236890 | AT4G10490.1 | 26.444 | 329 | 190 | 11 | 26 | 338 | 40 | 332 | 2.51e-31 | 121 |
Msa0236890 | AT3G55970.2 | 31.452 | 248 | 145 | 9 | 20 | 254 | 47 | 282 | 1.26e-30 | 118 |
Msa0236890 | AT4G25420.2 | 30.576 | 278 | 161 | 11 | 1 | 259 | 33 | 297 | 1.37e-30 | 118 |
Msa0236890 | AT3G21420.1 | 30.154 | 325 | 164 | 12 | 14 | 315 | 41 | 325 | 1.56e-30 | 119 |
Msa0236890 | AT2G44800.1 | 29.524 | 315 | 179 | 11 | 28 | 331 | 52 | 334 | 4.24e-30 | 118 |
Msa0236890 | AT1G62380.1 | 28.750 | 320 | 173 | 11 | 28 | 333 | 7 | 285 | 5.95e-30 | 117 |
Msa0236890 | AT3G51240.1 | 27.445 | 317 | 192 | 10 | 25 | 335 | 43 | 327 | 3.73e-29 | 115 |
Msa0236890 | AT1G12010.1 | 28.483 | 323 | 170 | 11 | 28 | 333 | 7 | 285 | 7.19e-29 | 114 |
Msa0236890 | AT1G05010.1 | 30.333 | 300 | 167 | 13 | 25 | 315 | 1 | 267 | 8.15e-29 | 114 |
Msa0236890 | AT1G77330.1 | 26.727 | 333 | 185 | 13 | 27 | 340 | 2 | 294 | 8.56e-29 | 114 |
Msa0236890 | AT4G21200.1 | 25.316 | 316 | 178 | 12 | 30 | 335 | 50 | 317 | 1.21e-28 | 114 |
Msa0236890 | AT2G30830.1 | 28.909 | 339 | 180 | 14 | 15 | 333 | 43 | 340 | 1.83e-28 | 114 |
Msa0236890 | AT5G51810.2 | 30.502 | 259 | 154 | 11 | 10 | 254 | 44 | 290 | 1.05e-27 | 110 |
Msa0236890 | AT3G60290.1 | 28.660 | 321 | 185 | 13 | 22 | 331 | 47 | 334 | 1.11e-27 | 111 |
Msa0236890 | AT4G22880.1 | 26.645 | 304 | 178 | 10 | 28 | 315 | 47 | 321 | 1.80e-27 | 111 |
Msa0236890 | AT4G22880.2 | 26.645 | 304 | 178 | 10 | 28 | 315 | 47 | 321 | 1.80e-27 | 111 |
Msa0236890 | AT4G22880.3 | 26.645 | 304 | 178 | 10 | 28 | 315 | 47 | 321 | 1.80e-27 | 111 |
Msa0236890 | AT3G19000.2 | 29.749 | 279 | 156 | 11 | 12 | 260 | 8 | 276 | 1.13e-26 | 107 |
Msa0236890 | AT5G63580.1 | 28.571 | 252 | 161 | 7 | 16 | 260 | 7 | 246 | 3.46e-26 | 105 |
Msa0236890 | AT5G59530.1 | 27.011 | 348 | 183 | 12 | 28 | 345 | 58 | 364 | 4.56e-26 | 107 |
Msa0236890 | AT1G50960.1 | 27.744 | 328 | 180 | 13 | 21 | 333 | 31 | 316 | 4.96e-26 | 107 |
Msa0236890 | AT5G63580.2 | 29.675 | 246 | 154 | 7 | 16 | 254 | 7 | 240 | 6.06e-26 | 104 |
Msa0236890 | AT5G05600.2 | 28.030 | 264 | 158 | 11 | 10 | 254 | 40 | 290 | 7.70e-26 | 105 |
Msa0236890 | AT5G59540.1 | 26.149 | 348 | 188 | 12 | 19 | 340 | 51 | 355 | 1.49e-25 | 106 |
Msa0236890 | AT5G63595.1 | 26.948 | 308 | 163 | 10 | 19 | 313 | 9 | 267 | 2.09e-25 | 103 |
Msa0236890 | AT3G19010.2 | 31.452 | 248 | 138 | 10 | 28 | 254 | 28 | 264 | 2.46e-25 | 104 |
Msa0236890 | AT1G04380.1 | 27.143 | 350 | 190 | 13 | 19 | 345 | 38 | 345 | 1.10e-24 | 103 |
Msa0236890 | AT3G19010.3 | 27.389 | 314 | 164 | 11 | 28 | 328 | 28 | 290 | 1.95e-24 | 102 |
Msa0236890 | AT2G19590.1 | 25.413 | 303 | 170 | 10 | 28 | 315 | 11 | 272 | 4.37e-24 | 100 |
Msa0236890 | AT5G43450.1 | 24.625 | 333 | 185 | 10 | 28 | 338 | 61 | 349 | 5.17e-24 | 101 |
Msa0236890 | AT5G43935.1 | 25.610 | 328 | 180 | 10 | 16 | 331 | 7 | 282 | 6.70e-24 | 100 |
Msa0236890 | AT4G25310.2 | 26.667 | 300 | 155 | 10 | 45 | 340 | 76 | 314 | 1.13e-22 | 97.4 |
Msa0236890 | AT1G49390.1 | 25.641 | 312 | 190 | 10 | 28 | 327 | 45 | 326 | 9.64e-22 | 95.1 |
Msa0236890 | AT1G06620.1 | 25.948 | 343 | 197 | 14 | 15 | 339 | 49 | 352 | 1.06e-21 | 95.1 |
Msa0236890 | AT5G43440.1 | 25.617 | 324 | 181 | 13 | 28 | 331 | 62 | 345 | 1.42e-21 | 94.7 |
Msa0236890 | AT4G23340.1 | 26.667 | 315 | 191 | 10 | 28 | 333 | 10 | 293 | 1.78e-21 | 94.0 |
Msa0236890 | AT5G20400.1 | 25.325 | 308 | 190 | 8 | 28 | 324 | 45 | 323 | 1.93e-21 | 94.4 |
Msa0236890 | AT2G25450.1 | 25.559 | 313 | 174 | 12 | 3 | 299 | 35 | 304 | 2.17e-21 | 94.4 |
Msa0236890 | AT4G16330.1 | 26.506 | 249 | 145 | 10 | 92 | 337 | 31 | 244 | 2.48e-21 | 92.4 |
Msa0236890 | AT1G06640.1 | 26.866 | 335 | 182 | 13 | 20 | 331 | 55 | 349 | 1.44e-20 | 92.0 |
Msa0236890 | AT3G61400.1 | 25.000 | 348 | 204 | 13 | 14 | 339 | 46 | 358 | 1.78e-20 | 91.7 |
Msa0236890 | AT1G49390.2 | 25.993 | 277 | 171 | 9 | 55 | 327 | 1 | 247 | 1.85e-20 | 90.1 |
Msa0236890 | AT4G25300.2 | 28.846 | 208 | 119 | 6 | 134 | 340 | 72 | 251 | 2.14e-20 | 89.7 |
Msa0236890 | AT2G30840.1 | 26.415 | 371 | 202 | 16 | 3 | 345 | 35 | 362 | 4.00e-20 | 90.9 |
Msa0236890 | AT1G06645.1 | 26.852 | 324 | 182 | 13 | 25 | 331 | 74 | 359 | 6.77e-20 | 90.1 |
Msa0236890 | AT5G54000.2 | 27.113 | 284 | 173 | 9 | 45 | 324 | 71 | 324 | 7.29e-20 | 89.7 |
Msa0236890 | AT5G20550.1 | 25.352 | 284 | 179 | 9 | 45 | 324 | 70 | 324 | 1.16e-19 | 89.4 |
Msa0236890 | AT3G51240.2 | 25.751 | 233 | 138 | 8 | 106 | 335 | 43 | 243 | 1.29e-19 | 87.8 |
Msa0236890 | AT5G07480.1 | 25.148 | 338 | 203 | 14 | 12 | 331 | 28 | 333 | 2.40e-19 | 88.6 |
Msa0236890 | AT5G59540.2 | 26.538 | 260 | 143 | 10 | 19 | 255 | 51 | 285 | 3.30e-19 | 87.0 |
Msa0236890 | AT1G03410.2 | 25.284 | 352 | 209 | 14 | 14 | 348 | 45 | 359 | 3.60e-19 | 87.8 |
Msa0236890 | AT2G19590.2 | 24.390 | 287 | 167 | 9 | 38 | 315 | 12 | 257 | 3.84e-19 | 87.0 |
Msa0236890 | AT1G03410.1 | 25.284 | 352 | 209 | 14 | 14 | 348 | 82 | 396 | 4.11e-19 | 88.2 |
Msa0236890 | AT3G49620.1 | 24.085 | 328 | 183 | 9 | 44 | 348 | 66 | 350 | 8.55e-19 | 86.7 |
Msa0236890 | AT5G54000.1 | 27.007 | 274 | 166 | 9 | 55 | 324 | 1 | 244 | 1.65e-18 | 84.7 |
Msa0236890 | AT1G04380.2 | 27.843 | 255 | 146 | 10 | 19 | 259 | 38 | 268 | 3.32e-18 | 84.0 |
Msa0236890 | AT5G43450.2 | 24.898 | 245 | 139 | 8 | 28 | 253 | 61 | 279 | 5.40e-18 | 83.6 |
Msa0236890 | AT3G49630.3 | 25.086 | 291 | 156 | 8 | 44 | 311 | 37 | 288 | 9.60e-18 | 83.6 |
Msa0236890 | AT3G49630.1 | 25.086 | 291 | 156 | 8 | 44 | 311 | 41 | 292 | 1.06e-17 | 83.2 |
Msa0236890 | AT3G61400.2 | 25.379 | 264 | 163 | 9 | 14 | 259 | 46 | 293 | 7.93e-17 | 80.1 |
Msa0236890 | AT5G43440.2 | 25.911 | 247 | 144 | 11 | 28 | 257 | 62 | 286 | 9.17e-17 | 80.1 |
Msa0236890 | AT1G03400.1 | 24.233 | 326 | 197 | 14 | 28 | 342 | 56 | 342 | 4.71e-16 | 79.0 |
Msa0236890 | AT1G06640.2 | 27.165 | 254 | 144 | 10 | 20 | 254 | 55 | 286 | 6.65e-16 | 78.2 |
Msa0236890 | AT3G50210.4 | 23.711 | 291 | 165 | 7 | 32 | 299 | 28 | 284 | 9.88e-16 | 77.8 |
Msa0236890 | AT3G50210.1 | 23.711 | 291 | 165 | 7 | 32 | 299 | 28 | 284 | 9.88e-16 | 77.8 |
Msa0236890 | AT3G50210.3 | 23.711 | 291 | 165 | 7 | 32 | 299 | 28 | 284 | 9.88e-16 | 77.8 |
Msa0236890 | AT1G06650.1 | 27.309 | 249 | 148 | 10 | 20 | 253 | 55 | 285 | 2.76e-15 | 76.3 |
Msa0236890 | AT5G51310.1 | 25.256 | 293 | 164 | 13 | 28 | 299 | 5 | 263 | 2.92e-15 | 76.3 |
Msa0236890 | AT5G12270.1 | 24.925 | 333 | 182 | 15 | 28 | 336 | 56 | 344 | 1.49e-14 | 74.3 |
Msa0236890 | AT3G47190.1 | 23.448 | 290 | 174 | 9 | 28 | 302 | 32 | 288 | 2.26e-13 | 70.5 |
Msa0236890 | AT1G52820.1 | 21.166 | 326 | 205 | 13 | 28 | 337 | 12 | 301 | 7.38e-13 | 68.9 |
Msa0236890 | AT4G23340.2 | 27.632 | 152 | 86 | 4 | 183 | 333 | 47 | 175 | 5.40e-11 | 62.0 |
Msa0236890 | AT5G07480.2 | 25.346 | 217 | 127 | 9 | 121 | 331 | 37 | 224 | 5.59e-11 | 62.8 |
Find 101 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGGAATTTATGTCCAATT+TGG | 0.176730 | 2_2:-9923963 | Msa0236890:CDS |
TCATTGCAATAACAATAAAT+AGG | 0.185966 | 2_2:+9921817 | None:intergenic |
GTGAAGGCTTGTAAGGAATT+TGG | 0.190043 | 2_2:-9924016 | Msa0236890:CDS |
GAATGTTGGCACATGATATT+TGG | 0.221993 | 2_2:-9922006 | Msa0236890:three_prime_UTR |
GAAGGAATTTGCTTGGGTTT+GGG | 0.238321 | 2_2:-9923008 | Msa0236890:CDS |
GAATTAATGGCTGATGGGTT+GGG | 0.283453 | 2_2:-9923144 | Msa0236890:CDS |
CTGTCTAGTGTTGGAATTAA+TGG | 0.285143 | 2_2:-9923157 | Msa0236890:CDS |
GCTGGTCCTCCTGATCCTTT+TGG | 0.285305 | 2_2:-9923890 | Msa0236890:CDS |
GGAAGGAATTTGCTTGGGTT+TGG | 0.286862 | 2_2:-9923009 | Msa0236890:CDS |
CATTGCAATAACAATAAATA+GGG | 0.297652 | 2_2:+9921818 | None:intergenic |
CTATAAGAGTCTTTGCTTCC+GGG | 0.305111 | 2_2:+9924038 | None:intergenic |
ATATGTTGGTGATACTCTTC+AGG | 0.308745 | 2_2:-9922812 | Msa0236890:intron |
AAGTGTAAAGCATAGGGTTT+TGG | 0.313870 | 2_2:-9922258 | Msa0236890:CDS |
GAGATGAAGGGTGCTTTAAA+TGG | 0.318506 | 2_2:+9924241 | None:intergenic |
CCATTCAACAAAGTTGTTGA+TGG | 0.337243 | 2_2:+9924085 | None:intergenic |
CAATGTTGGTGATACTCTTC+AGG | 0.338711 | 2_2:-9922866 | Msa0236890:CDS |
GTGAAAATCGACAAAATCTA+AGG | 0.347346 | 2_2:-9923760 | Msa0236890:intron |
AATGCTGCTTGTTGCACCTC+AGG | 0.352397 | 2_2:+9923036 | None:intergenic |
TTCCATCAGTGAGACAGATT+TGG | 0.358775 | 2_2:+9922929 | None:intergenic |
TATGTTTATTCATTTATCTA+TGG | 0.367689 | 2_2:-9921883 | Msa0236890:three_prime_UTR |
ACTATAAGAGTCTTTGCTTC+CGG | 0.371721 | 2_2:+9924037 | None:intergenic |
AACTTGCTTAACACATTCCT+TGG | 0.383795 | 2_2:+9923114 | None:intergenic |
GGAATTAATGGCTGATGGGT+TGG | 0.408971 | 2_2:-9923145 | Msa0236890:CDS |
CCATCAACAACTTTGTTGAA+TGG | 0.414722 | 2_2:-9924085 | Msa0236890:CDS |
GACTTGTTAGAGATAACATC+AGG | 0.415017 | 2_2:+9923797 | None:intergenic |
AATTAATGGCTGATGGGTTG+GGG | 0.422524 | 2_2:-9923143 | Msa0236890:CDS |
AGTAAGAGAATTGGTTCAAA+TGG | 0.422764 | 2_2:-9923860 | Msa0236890:CDS |
TCTTATAGTGAAGGCTTGTA+AGG | 0.425136 | 2_2:-9924023 | Msa0236890:CDS |
TTCAAATGGTGATGTTGGTT+GGG | 0.425962 | 2_2:-9923846 | Msa0236890:CDS |
ATGGTAATGCATGAAAGTTA+AGG | 0.426614 | 2_2:+9924268 | None:intergenic |
GGTTATGGAAGTAAGAGAAT+TGG | 0.429063 | 2_2:-9923869 | Msa0236890:CDS |
CGATTAGATATGTTATATGT+TGG | 0.429113 | 2_2:-9922826 | Msa0236890:CDS |
AGAAAGCAATGTACAATTCA+AGG | 0.429933 | 2_2:-9922100 | Msa0236890:CDS |
GGGTGCTTTAAATGGAGAAA+TGG | 0.430321 | 2_2:+9924249 | None:intergenic |
TCTGTCTCACTGATGGAACT+TGG | 0.437034 | 2_2:-9922924 | Msa0236890:CDS |
AGGCTGGCTGATTATAGACT+TGG | 0.452611 | 2_2:-9922080 | Msa0236890:CDS |
GTTCAAATGGTGATGTTGGT+TGG | 0.453207 | 2_2:-9923847 | Msa0236890:CDS |
TATATATATAGAAAGTGAAT+AGG | 0.456429 | 2_2:-9921925 | Msa0236890:three_prime_UTR |
AGTAAGAAATTATTTAATGT+TGG | 0.456630 | 2_2:+9924124 | None:intergenic |
CCTCAGGGCACGGTGGGTAA+TGG | 0.461056 | 2_2:+9923052 | None:intergenic |
CTCTTACTTCCATAACCAAA+AGG | 0.467266 | 2_2:+9923875 | None:intergenic |
AAGGAATTTGCTTGGGTTTG+GGG | 0.471960 | 2_2:-9923007 | Msa0236890:CDS |
TTTAACATTAAAGATGGTAA+AGG | 0.476105 | 2_2:+9922167 | None:intergenic |
TGGTAATGCATGAAAGTTAA+GGG | 0.476855 | 2_2:+9924269 | None:intergenic |
TTGAGATCTAATAGCACATC+AGG | 0.476870 | 2_2:-9922955 | Msa0236890:CDS |
TCAAGACAGAAATGACTTGT+GGG | 0.478331 | 2_2:+9922974 | None:intergenic |
TGAATGGAAGGAATTTGCTT+GGG | 0.478641 | 2_2:-9923014 | Msa0236890:CDS |
CTTCCATAACCAAAAGGATC+AGG | 0.481337 | 2_2:+9923881 | None:intergenic |
ATTGGTTCAAATGGTGATGT+TGG | 0.487540 | 2_2:-9923851 | Msa0236890:CDS |
GTTTAAAAGTGTAAAGCATA+GGG | 0.491250 | 2_2:-9922264 | Msa0236890:CDS |
ATTTGGAAAATGAAGCACTA+AGG | 0.493754 | 2_2:-9923946 | Msa0236890:CDS |
TTGAATGGAAGGAATTTGCT+TGG | 0.495411 | 2_2:-9923015 | Msa0236890:CDS |
TTGATGCAGGTATTGACTAA+TGG | 0.496751 | 2_2:-9922290 | Msa0236890:intron |
AGATGAAAGCAATATAAGAA+AGG | 0.499006 | 2_2:+9924200 | None:intergenic |
ATGCTGCTTGTTGCACCTCA+GGG | 0.501968 | 2_2:+9923037 | None:intergenic |
GCTTGTTGCACCTCAGGGCA+CGG | 0.503859 | 2_2:+9923042 | None:intergenic |
GCTCTGTCTTTCTCTGACTG+TGG | 0.508511 | 2_2:+9923911 | None:intergenic |
TGTCGTCGACCTTGCAGACC+CGG | 0.509378 | 2_2:-9924056 | Msa0236890:CDS |
GTGCAACAAGCAGCATTGAA+TGG | 0.509603 | 2_2:-9923030 | Msa0236890:CDS |
GGTTTAAAAGTGTAAAGCAT+AGG | 0.510882 | 2_2:-9922265 | Msa0236890:CDS |
CTGTCTCACTGATGGAACTT+GGG | 0.516008 | 2_2:-9922923 | Msa0236890:CDS |
CATCAGGGTTAGTATTAAGA+AGG | 0.519509 | 2_2:+9923813 | None:intergenic |
CTCCAAATCTGTCTCACTGA+TGG | 0.526180 | 2_2:-9922931 | Msa0236890:CDS |
AATTATATAGATGACCCATC+TGG | 0.527398 | 2_2:+9924304 | None:intergenic |
AAGCAATATAAGAAAGGAGG+AGG | 0.531160 | 2_2:+9924206 | None:intergenic |
GTGTTGGAATTAATGGCTGA+TGG | 0.531290 | 2_2:-9923150 | Msa0236890:CDS |
AACAAGCAGCATTGAATGGA+AGG | 0.537153 | 2_2:-9923026 | Msa0236890:CDS |
GGCTGGCTGATTATAGACTT+GGG | 0.538279 | 2_2:-9922079 | Msa0236890:CDS |
TCTTTGCTTCCGGGTCTGCA+AGG | 0.550301 | 2_2:+9924047 | None:intergenic |
AGGTTGTCGATGATATACTT+TGG | 0.551047 | 2_2:-9922218 | Msa0236890:CDS |
GTACAAAGAGTTCACGTGGT+TGG | 0.551890 | 2_2:-9922129 | Msa0236890:CDS |
CTCAAGACAGAAATGACTTG+TGG | 0.553027 | 2_2:+9922973 | None:intergenic |
TGAAAGCAATATAAGAAAGG+AGG | 0.556587 | 2_2:+9924203 | None:intergenic |
GGTGAACCATGGTGTTCCAT+TGG | 0.559016 | 2_2:-9923981 | Msa0236890:CDS |
GCTATTATGTAGGTCTGCTG+TGG | 0.561033 | 2_2:-9923211 | Msa0236890:intron |
GGGTCTGCAAGGTCGACGAC+AGG | 0.566966 | 2_2:+9924058 | None:intergenic |
GAAAATGTGCTGTCTAGTGT+TGG | 0.570738 | 2_2:-9923166 | Msa0236890:CDS |
AAATTGGACATAAATTCCAA+TGG | 0.573440 | 2_2:+9923965 | None:intergenic |
AGCAATGTACAATTCAAGGC+TGG | 0.573618 | 2_2:-9922096 | Msa0236890:CDS |
TTGTCGATGATATACTTTGG+AGG | 0.583079 | 2_2:-9922215 | Msa0236890:CDS |
GGTGACAATGAGAGCCAGAT+GGG | 0.584164 | 2_2:-9924318 | None:intergenic |
AGCAAAGACTCTTATAGTGA+AGG | 0.588277 | 2_2:-9924032 | Msa0236890:CDS |
AGGTGACAATGAGAGCCAGA+TGG | 0.591385 | 2_2:-9924319 | None:intergenic |
GTTGCACCTCAGGGCACGGT+GGG | 0.593851 | 2_2:+9923046 | None:intergenic |
TGTTGGAATTAATGGCTGAT+GGG | 0.595328 | 2_2:-9923149 | Msa0236890:CDS |
TGGCTGACACAACAAAGTCA+AGG | 0.599938 | 2_2:-9922238 | Msa0236890:CDS |
TGCAGGTATTGACTAATGGT+AGG | 0.608292 | 2_2:-9922286 | Msa0236890:intron |
AATGCATGAAAGTTAAGGGA+GGG | 0.613781 | 2_2:+9924273 | None:intergenic |
CAGTCAGAGAAAGACAGAGC+TGG | 0.620304 | 2_2:-9923908 | Msa0236890:CDS |
GGAATTTGGATTCTTCAAAG+TGG | 0.621903 | 2_2:-9924002 | Msa0236890:CDS |
ATGCATGAAAGTTAAGGGAG+GGG | 0.628931 | 2_2:+9924274 | None:intergenic |
ATGGGTTGGGGATTGAGCCA+AGG | 0.632929 | 2_2:-9923131 | Msa0236890:CDS |
GTTTGTACAAAGAGTTCACG+TGG | 0.638221 | 2_2:-9922133 | Msa0236890:CDS |
TGTTGCACCTCAGGGCACGG+TGG | 0.643786 | 2_2:+9923045 | None:intergenic |
TGGCTTAGACAAAACAACCA+TGG | 0.648574 | 2_2:+9924144 | None:intergenic |
CCATAACCAAAAGGATCAGG+AGG | 0.661844 | 2_2:+9923884 | None:intergenic |
CCATTACCCACCGTGCCCTG+AGG | 0.673400 | 2_2:-9923052 | Msa0236890:CDS |
TAATGCATGAAAGTTAAGGG+AGG | 0.691955 | 2_2:+9924272 | None:intergenic |
TTCTTCAAAGTGGTGAACCA+TGG | 0.693417 | 2_2:-9923992 | Msa0236890:CDS |
ACTTGTTAGAGATAACATCA+GGG | 0.698450 | 2_2:+9923798 | None:intergenic |
TAAATTCCAATGGAACACCA+TGG | 0.713883 | 2_2:+9923975 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTAAGAAATTATTTAATGT+TGG | + | chr2_2:9921993-9922012 | None:intergenic | 15.0% |
!! | TTTATTCTTTATTAGTCATT+TGG | + | chr2_2:9922510-9922529 | None:intergenic | 15.0% |
!! | TTGTAAAATTGAAAATTGTA+CGG | - | chr2_2:9922551-9922570 | Msa0236890:intron | 15.0% |
!! | ATGAATAAAAAAAAGGTTAA+AGG | + | chr2_2:9923402-9923421 | None:intergenic | 15.0% |
!! | ATTTAATGATTGACATTAAT+TGG | + | chr2_2:9923547-9923566 | None:intergenic | 15.0% |
!!! | TATTTTTCTCTTTTTAAATG+TGG | - | chr2_2:9923656-9923675 | Msa0236890:intron | 15.0% |
!!! | TTTCTTTTTTGATACTAAAA+AGG | + | chr2_2:9923704-9923723 | None:intergenic | 15.0% |
!!! | TCTTTTTTTAACATTAAAGA+TGG | + | chr2_2:9923956-9923975 | None:intergenic | 15.0% |
!! | TATATATATAGAAAGTGAAT+AGG | - | chr2_2:9924189-9924208 | Msa0236890:five_prime_UTR | 15.0% |
!! | TATGTTTATTCATTTATCTA+TGG | - | chr2_2:9924231-9924250 | Msa0236890:five_prime_UTR | 15.0% |
!!! | TGGTTTAATTGTTTTAATCA+TGG | - | chr2_2:9922479-9922498 | Msa0236890:intron | 20.0% |
!! | TTATACCAAGTTGTAAAAAA+TGG | + | chr2_2:9922743-9922762 | None:intergenic | 20.0% |
!! | ATGTGTAATTTATACATGTT+TGG | + | chr2_2:9922834-9922853 | None:intergenic | 20.0% |
!!! | GAGTCTTATGAATAAAAAAA+AGG | + | chr2_2:9923409-9923428 | None:intergenic | 20.0% |
!! | AATTTAAATGGAATACATGT+GGG | + | chr2_2:9923731-9923750 | None:intergenic | 20.0% |
!! | AAATTTAAATGGAATACATG+TGG | + | chr2_2:9923732-9923751 | None:intergenic | 20.0% |
!!! | TTCCATTTAAATTTTTGAAG+TGG | - | chr2_2:9923738-9923757 | Msa0236890:intron | 20.0% |
!!! | TCCATTTAAATTTTTGAAGT+GGG | - | chr2_2:9923739-9923758 | Msa0236890:intron | 20.0% |
!! | TTTAACATTAAAGATGGTAA+AGG | + | chr2_2:9923950-9923969 | None:intergenic | 20.0% |
!! | CATTGCAATAACAATAAATA+GGG | + | chr2_2:9924299-9924318 | None:intergenic | 20.0% |
!! | TCATTGCAATAACAATAAAT+AGG | + | chr2_2:9924300-9924319 | None:intergenic | 20.0% |
! | AGAAGAAAAATAGAGATGAA+GGG | + | chr2_2:9921888-9921907 | None:intergenic | 25.0% |
! | AGATGAAAGCAATATAAGAA+AGG | + | chr2_2:9921917-9921936 | None:intergenic | 25.0% |
! | AAATTGGACATAAATTCCAA+TGG | + | chr2_2:9922152-9922171 | None:intergenic | 25.0% |
! | ATTGGAATTTATGTCCAATT+TGG | - | chr2_2:9922151-9922170 | Msa0236890:CDS | 25.0% |
!!! | TTAGATTTTGTCGATTTTCA+CGG | + | chr2_2:9922355-9922374 | None:intergenic | 25.0% |
! | AACATTGAAAAGGAAAAACA+GGG | + | chr2_2:9922415-9922434 | None:intergenic | 25.0% |
!!! | CTTTTCAATGTTGATAAAAC+CGG | - | chr2_2:9922423-9922442 | Msa0236890:intron | 25.0% |
!! | TTCTAAACCAATTTTTATCG+TGG | + | chr2_2:9922701-9922720 | None:intergenic | 25.0% |
!! | GGTTTAGAATTAATTTCAAC+CGG | - | chr2_2:9922712-9922731 | Msa0236890:intron | 25.0% |
! | AACTTGGTATAATGTATGTT+TGG | - | chr2_2:9922751-9922770 | Msa0236890:intron | 25.0% |
! | ACAAAAGTGAATCCATTATA+AGG | - | chr2_2:9922784-9922803 | Msa0236890:intron | 25.0% |
! | TAGAGATAACATCCTTATAA+TGG | + | chr2_2:9922799-9922818 | None:intergenic | 25.0% |
! | TAAACACATAACTAACATGA+GGG | + | chr2_2:9922859-9922878 | None:intergenic | 25.0% |
! | ATAAACACATAACTAACATG+AGG | + | chr2_2:9922860-9922879 | None:intergenic | 25.0% |
!!! | ACTTCTTTTTTCATCAATGT+TGG | - | chr2_2:9923234-9923253 | Msa0236890:intron | 25.0% |
! | CGATTAGATATGTTATATGT+TGG | - | chr2_2:9923288-9923307 | Msa0236890:intron | 25.0% |
! | AGAAAAATAATTGAGAGACT+TGG | + | chr2_2:9923645-9923664 | None:intergenic | 25.0% |
!!! | CCATTTAAATTTTTGAAGTG+GGG | - | chr2_2:9923740-9923759 | Msa0236890:intron | 25.0% |
!!! | CATTTAAATTTTTGAAGTGG+GGG | - | chr2_2:9923741-9923760 | Msa0236890:intron | 25.0% |
!! | GTTTAAAAGTGTAAAGCATA+GGG | - | chr2_2:9923850-9923869 | Msa0236890:CDS | 25.0% |
!!! | TTGCCATAAGATTTTTCAAA+AGG | + | chr2_2:9924061-9924080 | None:intergenic | 25.0% |
!!! | CAACATTCAGAATTTTTTTG+AGG | + | chr2_2:9924096-9924115 | None:intergenic | 25.0% |
! | CTCAAAAAAATTCTGAATGT+TGG | - | chr2_2:9924094-9924113 | Msa0236890:CDS | 25.0% |
AATTATATAGATGACCCATC+TGG | + | chr2_2:9921813-9921832 | None:intergenic | 30.0% | |
! | TGGTAATGCATGAAAGTTAA+GGG | + | chr2_2:9921848-9921867 | None:intergenic | 30.0% |
! | ATGGTAATGCATGAAAGTTA+AGG | + | chr2_2:9921849-9921868 | None:intergenic | 30.0% |
GAGAAGAAAAATAGAGATGA+AGG | + | chr2_2:9921889-9921908 | None:intergenic | 30.0% | |
TGAAAGCAATATAAGAAAGG+AGG | + | chr2_2:9921914-9921933 | None:intergenic | 30.0% | |
!!! | AACCATGGTTTTGTTTTTTG+GGG | + | chr2_2:9921958-9921977 | None:intergenic | 30.0% |
!!! | CAACCATGGTTTTGTTTTTT+GGG | + | chr2_2:9921959-9921978 | None:intergenic | 30.0% |
!!! | ACAACCATGGTTTTGTTTTT+TGG | + | chr2_2:9921960-9921979 | None:intergenic | 30.0% |
! | TAGTGCTTCATTTTCCAAAT+TGG | + | chr2_2:9922168-9922187 | None:intergenic | 30.0% |
! | ATTTGGAAAATGAAGCACTA+AGG | - | chr2_2:9922168-9922187 | Msa0236890:CDS | 30.0% |
! | AGTAAGAGAATTGGTTCAAA+TGG | - | chr2_2:9922254-9922273 | Msa0236890:CDS | 30.0% |
! | ACTTGTTAGAGATAACATCA+GGG | + | chr2_2:9922319-9922338 | None:intergenic | 30.0% |
GTGAAAATCGACAAAATCTA+AGG | - | chr2_2:9922354-9922373 | Msa0236890:intron | 30.0% | |
ACATTGAAAAGGAAAAACAG+GGG | + | chr2_2:9922414-9922433 | None:intergenic | 30.0% | |
CAACATTGAAAAGGAAAAAC+AGG | + | chr2_2:9922416-9922435 | None:intergenic | 30.0% | |
!! | CGGTTTTATCAACATTGAAA+AGG | + | chr2_2:9922425-9922444 | None:intergenic | 30.0% |
CCATAAACTGAAAATCTCAT+CGG | + | chr2_2:9922462-9922481 | None:intergenic | 30.0% | |
TCATGTTGTGAAAATTAGAC+CGG | + | chr2_2:9922656-9922675 | None:intergenic | 30.0% | |
! | AGTTTTGCCACGATAAAAAT+TGG | - | chr2_2:9922691-9922710 | Msa0236890:intron | 30.0% |
TAGAATTAATTTCAACCGGT+TGG | - | chr2_2:9922716-9922735 | Msa0236890:intron | 30.0% | |
!!! | TTGGTCCATTTTTTACAACT+TGG | - | chr2_2:9922735-9922754 | Msa0236890:intron | 30.0% |
!!! | GCTACTTTTTGCTATTATGT+AGG | - | chr2_2:9922893-9922912 | Msa0236890:CDS | 30.0% |
! | ATGAAAAAAGAAGTGTGATC+AGG | + | chr2_2:9923228-9923247 | None:intergenic | 30.0% |
CCCCACTTCAAAAATTTAAA+TGG | + | chr2_2:9923743-9923762 | None:intergenic | 30.0% | |
GGTTATCAAACATTCTAACT+TGG | - | chr2_2:9923775-9923794 | Msa0236890:CDS | 30.0% | |
! | GGTTTAAAAGTGTAAAGCAT+AGG | - | chr2_2:9923849-9923868 | Msa0236890:CDS | 30.0% |
AGAAAGCAATGTACAATTCA+AGG | - | chr2_2:9924014-9924033 | Msa0236890:CDS | 30.0% | |
!! | TGATATTTGGCCTTTCTTTT+TGG | - | chr2_2:9924121-9924140 | Msa0236890:CDS | 30.0% |
!! | GATATTTGGCCTTTCTTTTT+GGG | - | chr2_2:9924122-9924141 | Msa0236890:CDS | 30.0% |
AAAAAAGTAGAGTCAACTGT+TGG | + | chr2_2:9924165-9924184 | None:intergenic | 30.0% | |
AATGCATGAAAGTTAAGGGA+GGG | + | chr2_2:9921844-9921863 | None:intergenic | 35.0% | |
TAATGCATGAAAGTTAAGGG+AGG | + | chr2_2:9921845-9921864 | None:intergenic | 35.0% | |
AAGCAATATAAGAAAGGAGG+AGG | + | chr2_2:9921911-9921930 | None:intergenic | 35.0% | |
TACCCCAAAAAACAAAACCA+TGG | - | chr2_2:9921953-9921972 | Msa0236890:three_prime_UTR | 35.0% | |
CCATTCAACAAAGTTGTTGA+TGG | + | chr2_2:9922032-9922051 | None:intergenic | 35.0% | |
CCATCAACAACTTTGTTGAA+TGG | - | chr2_2:9922029-9922048 | Msa0236890:three_prime_UTR | 35.0% | |
ACTATAAGAGTCTTTGCTTC+CGG | + | chr2_2:9922080-9922099 | None:intergenic | 35.0% | |
AGCAAAGACTCTTATAGTGA+AGG | - | chr2_2:9922082-9922101 | Msa0236890:CDS | 35.0% | |
TCTTATAGTGAAGGCTTGTA+AGG | - | chr2_2:9922091-9922110 | Msa0236890:CDS | 35.0% | |
GGAATTTGGATTCTTCAAAG+TGG | - | chr2_2:9922112-9922131 | Msa0236890:CDS | 35.0% | |
TAAATTCCAATGGAACACCA+TGG | + | chr2_2:9922142-9922161 | None:intergenic | 35.0% | |
CTCTTACTTCCATAACCAAA+AGG | + | chr2_2:9922242-9922261 | None:intergenic | 35.0% | |
GGTTATGGAAGTAAGAGAAT+TGG | - | chr2_2:9922245-9922264 | Msa0236890:CDS | 35.0% | |
! | ATTGGTTCAAATGGTGATGT+TGG | - | chr2_2:9922263-9922282 | Msa0236890:CDS | 35.0% |
! | TTCAAATGGTGATGTTGGTT+GGG | - | chr2_2:9922268-9922287 | Msa0236890:CDS | 35.0% |
! | CATCAGGGTTAGTATTAAGA+AGG | + | chr2_2:9922304-9922323 | None:intergenic | 35.0% |
!! | GACTTGTTAGAGATAACATC+AGG | + | chr2_2:9922320-9922339 | None:intergenic | 35.0% |
!!! | TTGTCGATTTTCACGGTAAA+AGG | + | chr2_2:9922348-9922367 | None:intergenic | 35.0% |
! | CCGATGAGATTTTCAGTTTA+TGG | - | chr2_2:9922459-9922478 | Msa0236890:intron | 35.0% |
GTTGTAAAAAATGGACCAAC+CGG | + | chr2_2:9922734-9922753 | None:intergenic | 35.0% | |
!!! | TAATGGATTCACTTTTGTCG+TGG | + | chr2_2:9922782-9922801 | None:intergenic | 35.0% |
! | CTGTCTAGTGTTGGAATTAA+TGG | - | chr2_2:9922957-9922976 | Msa0236890:CDS | 35.0% |
TGTTGGAATTAATGGCTGAT+GGG | - | chr2_2:9922965-9922984 | Msa0236890:CDS | 35.0% | |
! | AACTTGCTTAACACATTCCT+TGG | + | chr2_2:9923003-9923022 | None:intergenic | 35.0% |
! | TTGAATGGAAGGAATTTGCT+TGG | - | chr2_2:9923099-9923118 | Msa0236890:CDS | 35.0% |
! | TGAATGGAAGGAATTTGCTT+GGG | - | chr2_2:9923100-9923119 | Msa0236890:CDS | 35.0% |
! | TCAAGACAGAAATGACTTGT+GGG | + | chr2_2:9923143-9923162 | None:intergenic | 35.0% |
TTGAGATCTAATAGCACATC+AGG | - | chr2_2:9923159-9923178 | Msa0236890:CDS | 35.0% | |
! | AAAAAAGAAGTGTGATCAGG+TGG | + | chr2_2:9923225-9923244 | None:intergenic | 35.0% |
!! | ATATGTTGGTGATACTCTTC+AGG | - | chr2_2:9923302-9923321 | Msa0236890:intron | 35.0% |
CAGTCTTTGAATTGATCGAA+TGG | + | chr2_2:9923587-9923606 | None:intergenic | 35.0% | |
CATTCGATCAATTCAAAGAC+TGG | - | chr2_2:9923585-9923604 | Msa0236890:intron | 35.0% | |
!! | TTGATGCAGGTATTGACTAA+TGG | - | chr2_2:9923824-9923843 | Msa0236890:CDS | 35.0% |
! | AAGTGTAAAGCATAGGGTTT+TGG | - | chr2_2:9923856-9923875 | Msa0236890:CDS | 35.0% |
AGGTTGTCGATGATATACTT+TGG | - | chr2_2:9923896-9923915 | Msa0236890:CDS | 35.0% | |
TTGTCGATGATATACTTTGG+AGG | - | chr2_2:9923899-9923918 | Msa0236890:CDS | 35.0% | |
!! | GGGCCTTTTGAAAAATCTTA+TGG | - | chr2_2:9924055-9924074 | Msa0236890:CDS | 35.0% |
GAATGTTGGCACATGATATT+TGG | - | chr2_2:9924108-9924127 | Msa0236890:CDS | 35.0% | |
ATGCATGAAAGTTAAGGGAG+GGG | + | chr2_2:9921843-9921862 | None:intergenic | 40.0% | |
! | GGGTGCTTTAAATGGAGAAA+TGG | + | chr2_2:9921868-9921887 | None:intergenic | 40.0% |
!! | GAGATGAAGGGTGCTTTAAA+TGG | + | chr2_2:9921876-9921895 | None:intergenic | 40.0% |
TGGCTTAGACAAAACAACCA+TGG | + | chr2_2:9921973-9921992 | None:intergenic | 40.0% | |
CTATAAGAGTCTTTGCTTCC+GGG | + | chr2_2:9922079-9922098 | None:intergenic | 40.0% | |
GTGAAGGCTTGTAAGGAATT+TGG | - | chr2_2:9922098-9922117 | Msa0236890:CDS | 40.0% | |
TTCTTCAAAGTGGTGAACCA+TGG | - | chr2_2:9922122-9922141 | Msa0236890:CDS | 40.0% | |
CTTCCATAACCAAAAGGATC+AGG | + | chr2_2:9922236-9922255 | None:intergenic | 40.0% | |
! | GTTCAAATGGTGATGTTGGT+TGG | - | chr2_2:9922267-9922286 | Msa0236890:CDS | 40.0% |
GAAAATGTGCTGTCTAGTGT+TGG | - | chr2_2:9922948-9922967 | Msa0236890:CDS | 40.0% | |
GTGTTGGAATTAATGGCTGA+TGG | - | chr2_2:9922964-9922983 | Msa0236890:CDS | 40.0% | |
!! | GAATTAATGGCTGATGGGTT+GGG | - | chr2_2:9922970-9922989 | Msa0236890:CDS | 40.0% |
!! | AATTAATGGCTGATGGGTTG+GGG | - | chr2_2:9922971-9922990 | Msa0236890:CDS | 40.0% |
! | AACAAGCAGCATTGAATGGA+AGG | - | chr2_2:9923088-9923107 | Msa0236890:CDS | 40.0% |
! | GAAGGAATTTGCTTGGGTTT+GGG | - | chr2_2:9923106-9923125 | Msa0236890:CDS | 40.0% |
! | AAGGAATTTGCTTGGGTTTG+GGG | - | chr2_2:9923107-9923126 | Msa0236890:CDS | 40.0% |
CTCAAGACAGAAATGACTTG+TGG | + | chr2_2:9923144-9923163 | None:intergenic | 40.0% | |
TTCCATCAGTGAGACAGATT+TGG | + | chr2_2:9923188-9923207 | None:intergenic | 40.0% | |
!! | CAATGTTGGTGATACTCTTC+AGG | - | chr2_2:9923248-9923267 | Msa0236890:intron | 40.0% |
GTATATGTCGAGAAAGGTCT+TGG | + | chr2_2:9923436-9923455 | None:intergenic | 40.0% | |
TGACTCGTATATGTCGAGAA+AGG | + | chr2_2:9923442-9923461 | None:intergenic | 40.0% | |
GACATATACGAGTCATGTTC+TGG | - | chr2_2:9923447-9923466 | Msa0236890:intron | 40.0% | |
! | GATCAAGTTGCAAATCGTAG+AGG | - | chr2_2:9923617-9923636 | Msa0236890:intron | 40.0% |
GTGTGTGTTGAAATTGATGC+AGG | - | chr2_2:9923811-9923830 | Msa0236890:CDS | 40.0% | |
!! | TGCAGGTATTGACTAATGGT+AGG | - | chr2_2:9923828-9923847 | Msa0236890:CDS | 40.0% |
! | ACTATCTTTTCACTCAAGGG+TGG | + | chr2_2:9923926-9923945 | None:intergenic | 40.0% |
! | GGCACTATCTTTTCACTCAA+GGG | + | chr2_2:9923929-9923948 | None:intergenic | 40.0% |
! | AGGCACTATCTTTTCACTCA+AGG | + | chr2_2:9923930-9923949 | None:intergenic | 40.0% |
GTTTGTACAAAGAGTTCACG+TGG | - | chr2_2:9923981-9924000 | Msa0236890:CDS | 40.0% | |
AGCAATGTACAATTCAAGGC+TGG | - | chr2_2:9924018-9924037 | Msa0236890:CDS | 40.0% | |
CCATAACCAAAAGGATCAGG+AGG | + | chr2_2:9922233-9922252 | None:intergenic | 45.0% | |
!! | CCTCCTGATCCTTTTGGTTA+TGG | - | chr2_2:9922230-9922249 | Msa0236890:CDS | 45.0% |
TTGTACGGTTGAACAAACCG+CGG | - | chr2_2:9922566-9922585 | Msa0236890:intron | 45.0% | |
ACGGTCAATAGTCCTATAGC+GGG | + | chr2_2:9922597-9922616 | None:intergenic | 45.0% | |
CACGGTCAATAGTCCTATAG+CGG | + | chr2_2:9922598-9922617 | None:intergenic | 45.0% | |
GTTGTGAAAATTAGACCGGC+CGG | + | chr2_2:9922652-9922671 | None:intergenic | 45.0% | |
GCTATTATGTAGGTCTGCTG+TGG | - | chr2_2:9922903-9922922 | Msa0236890:CDS | 45.0% | |
! | GGAATTAATGGCTGATGGGT+TGG | - | chr2_2:9922969-9922988 | Msa0236890:CDS | 45.0% |
! | GTGCAACAAGCAGCATTGAA+TGG | - | chr2_2:9923084-9923103 | Msa0236890:CDS | 45.0% |
! | GGAAGGAATTTGCTTGGGTT+TGG | - | chr2_2:9923105-9923124 | Msa0236890:CDS | 45.0% |
CTCCAAATCTGTCTCACTGA+TGG | - | chr2_2:9923183-9923202 | Msa0236890:CDS | 45.0% | |
TCTGTCTCACTGATGGAACT+TGG | - | chr2_2:9923190-9923209 | Msa0236890:CDS | 45.0% | |
CTGTCTCACTGATGGAACTT+GGG | - | chr2_2:9923191-9923210 | Msa0236890:CDS | 45.0% | |
! | TGAAGTGGGGGTCTGTTTTA+AGG | - | chr2_2:9923753-9923772 | Msa0236890:intron | 45.0% |
!! | GAAGTGGGGGTCTGTTTTAA+GGG | - | chr2_2:9923754-9923773 | Msa0236890:intron | 45.0% |
TGGCTGACACAACAAAGTCA+AGG | - | chr2_2:9923876-9923895 | Msa0236890:CDS | 45.0% | |
GTACAAAGAGTTCACGTGGT+TGG | - | chr2_2:9923985-9924004 | Msa0236890:CDS | 45.0% | |
! | AGGCTGGCTGATTATAGACT+TGG | - | chr2_2:9924034-9924053 | Msa0236890:CDS | 45.0% |
! | GGCTGGCTGATTATAGACTT+GGG | - | chr2_2:9924035-9924054 | Msa0236890:CDS | 45.0% |
ACGCGTACACCCAAAAAGAA+AGG | + | chr2_2:9924134-9924153 | None:intergenic | 45.0% | |
!!! | TCTTTTTGGGTGTACGCGTT+TGG | - | chr2_2:9924135-9924154 | Msa0236890:CDS | 45.0% |
!!! | CTTTTTGGGTGTACGCGTTT+GGG | - | chr2_2:9924136-9924155 | Msa0236890:CDS | 45.0% |
GGTGAACCATGGTGTTCCAT+TGG | - | chr2_2:9922133-9922152 | Msa0236890:CDS | 50.0% | |
GCTCTGTCTTTCTCTGACTG+TGG | + | chr2_2:9922206-9922225 | None:intergenic | 50.0% | |
CAGTCAGAGAAAGACAGAGC+TGG | - | chr2_2:9922206-9922225 | Msa0236890:CDS | 50.0% | |
!! | CATCGGTTCGATCACTGTTC+CGG | + | chr2_2:9922445-9922464 | None:intergenic | 50.0% |
ACCGTGTTTGAACCAACAGC+CGG | - | chr2_2:9922612-9922631 | Msa0236890:intron | 50.0% | |
!! | TCCGGCTGTTGGTTCAAACA+CGG | + | chr2_2:9922616-9922635 | None:intergenic | 50.0% |
! | ATGCTGCTTGTTGCACCTCA+GGG | + | chr2_2:9923080-9923099 | None:intergenic | 50.0% |
! | AATGCTGCTTGTTGCACCTC+AGG | + | chr2_2:9923081-9923100 | None:intergenic | 50.0% |
TCTTTGCTTCCGGGTCTGCA+AGG | + | chr2_2:9922070-9922089 | None:intergenic | 55.0% | |
! | GCTGGTCCTCCTGATCCTTT+TGG | - | chr2_2:9922224-9922243 | Msa0236890:CDS | 55.0% |
GTTTGAACCAACAGCCGGAC+TGG | - | chr2_2:9922617-9922636 | Msa0236890:intron | 55.0% | |
!! | ATGGGTTGGGGATTGAGCCA+AGG | - | chr2_2:9922983-9923002 | Msa0236890:CDS | 55.0% |
TGTCGTCGACCTTGCAGACC+CGG | - | chr2_2:9922058-9922077 | Msa0236890:CDS | 60.0% | |
!! | TCCTATAGCGGGTTGAGCCG+CGG | + | chr2_2:9922586-9922605 | None:intergenic | 60.0% |
! | GCTTGTTGCACCTCAGGGCA+CGG | + | chr2_2:9923075-9923094 | None:intergenic | 60.0% |
GGGTCTGCAAGGTCGACGAC+AGG | + | chr2_2:9922059-9922078 | None:intergenic | 65.0% | |
ACCGCGGCTCAACCCGCTAT+AGG | - | chr2_2:9922582-9922601 | Msa0236890:intron | 65.0% | |
!! | GAACCAACAGCCGGACTGGC+TGG | - | chr2_2:9922621-9922640 | Msa0236890:intron | 65.0% |
CAACCAGCCAGTCCGGCTGT+TGG | + | chr2_2:9922627-9922646 | None:intergenic | 65.0% | |
!! | GCCGGACTGGCTGGTTGAAC+CGG | - | chr2_2:9922630-9922649 | Msa0236890:intron | 65.0% |
! | GCCGGTTCAACCAGCCAGTC+CGG | + | chr2_2:9922634-9922653 | None:intergenic | 65.0% |
! | GACTGGCTGGTTGAACCGGC+CGG | - | chr2_2:9922634-9922653 | Msa0236890:intron | 65.0% |
CCTCAGGGCACGGTGGGTAA+TGG | + | chr2_2:9923065-9923084 | None:intergenic | 65.0% | |
CCATTACCCACCGTGCCCTG+AGG | - | chr2_2:9923062-9923081 | Msa0236890:CDS | 65.0% | |
GTTGCACCTCAGGGCACGGT+GGG | + | chr2_2:9923071-9923090 | None:intergenic | 65.0% | |
TGTTGCACCTCAGGGCACGG+TGG | + | chr2_2:9923072-9923091 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 9921809 | 9924327 | 9921809 | ID=Msa0236890;Name=Msa0236890 |
chr2_2 | mRNA | 9921809 | 9924327 | 9921809 | ID=Msa0236890-mRNA-1;Parent=Msa0236890;Name=Msa0236890-mRNA-1;_AED=0.08;_eAED=0.08;_QI=163|0.5|0.66|1|1|1|3|243|354 |
chr2_2 | exon | 9921809 | 9922303 | 9921809 | ID=Msa0236890-mRNA-1:exon:4284;Parent=Msa0236890-mRNA-1 |
chr2_2 | exon | 9922813 | 9923221 | 9922813 | ID=Msa0236890-mRNA-1:exon:4283;Parent=Msa0236890-mRNA-1 |
chr2_2 | exon | 9923761 | 9924327 | 9923761 | ID=Msa0236890-mRNA-1:exon:4282;Parent=Msa0236890-mRNA-1 |
chr2_2 | five_prime_UTR | 9924165 | 9924327 | 9924165 | ID=Msa0236890-mRNA-1:five_prime_utr;Parent=Msa0236890-mRNA-1 |
chr2_2 | CDS | 9923761 | 9924164 | 9923761 | ID=Msa0236890-mRNA-1:cds;Parent=Msa0236890-mRNA-1 |
chr2_2 | CDS | 9922813 | 9923221 | 9922813 | ID=Msa0236890-mRNA-1:cds;Parent=Msa0236890-mRNA-1 |
chr2_2 | CDS | 9922052 | 9922303 | 9922052 | ID=Msa0236890-mRNA-1:cds;Parent=Msa0236890-mRNA-1 |
chr2_2 | three_prime_UTR | 9921809 | 9922051 | 9921809 | ID=Msa0236890-mRNA-1:three_prime_utr;Parent=Msa0236890-mRNA-1 |
Gene Sequence |
Protein sequence |