Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237730 | XP_003594096.1 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237730 | G7IKE1 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195890 | Msa0237730 | 0.939822 | 6.654664e-100 | -8.615850e-47 |
| Msa0237730 | Msa0275300 | 0.895960 | 5.827007e-76 | -8.615850e-47 |
| Msa0237730 | Msa0315800 | 0.978278 | 1.719633e-145 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237730 | MtrunA17_Chr2g0287251 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1687 |
| Msa0237730 | MtrunA17_Chr4g0065871 | 76.842 | 285 | 65 | 1 | 361 | 644 | 5 | 289 | 8.69e-143 | 423 |
| Msa0237730 | MtrunA17_Chr4g0065861 | 53.628 | 317 | 78 | 10 | 1 | 315 | 1 | 250 | 4.48e-93 | 293 |
| Msa0237730 | MtrunA17_Chr4g0065901 | 77.181 | 149 | 33 | 1 | 343 | 491 | 1 | 148 | 2.07e-70 | 229 |
| Msa0237730 | MtrunA17_Chr4g0065881 | 72.500 | 120 | 33 | 0 | 712 | 831 | 1 | 120 | 5.94e-52 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237730 | AT5G18980.1 | 66.108 | 835 | 255 | 8 | 14 | 834 | 13 | 833 | 0.0 | 1091 |
| Msa0237730 | AT3G06210.1 | 64.720 | 839 | 279 | 7 | 9 | 837 | 7 | 838 | 0.0 | 1039 |
| Msa0237730 | AT5G18980.2 | 68.421 | 646 | 196 | 4 | 197 | 834 | 20 | 665 | 0.0 | 896 |
| Msa0237730 | AT5G18980.3 | 68.421 | 646 | 196 | 4 | 197 | 834 | 20 | 665 | 0.0 | 896 |
| Msa0237730 | AT3G06210.2 | 64.865 | 703 | 230 | 7 | 9 | 701 | 7 | 702 | 0.0 | 870 |
| Msa0237730 | AT4G14280.1 | 57.436 | 780 | 301 | 13 | 65 | 834 | 39 | 797 | 0.0 | 827 |
Find 159 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAGTTGTTACATCTTTC+TGG | 0.114625 | 2_2:+10991173 | None:intergenic |
| CATATGTGTGTGAAACTTTC+AGG | 0.203108 | 2_2:-10990124 | Msa0237730:three_prime_UTR |
| TATCTTTGATGGATTGAAAA+TGG | 0.219392 | 2_2:-10992025 | Msa0237730:CDS |
| GATTGGAATTTCTATATCTT+TGG | 0.246574 | 2_2:-10991881 | Msa0237730:CDS |
| ATCATCCGAATTACGGGTTC+TGG | 0.285947 | 2_2:-10991639 | Msa0237730:CDS |
| TCTTAACAGAGAAGGCTTAT+TGG | 0.287888 | 2_2:-10992173 | Msa0237730:CDS |
| CTGCTGTAACTCCCTTTAAC+TGG | 0.292238 | 2_2:+10990978 | None:intergenic |
| ATTGATGTTTCTTTAGAATC+TGG | 0.294135 | 2_2:+10990450 | None:intergenic |
| CTTAACAGAGAAGGCTTATT+GGG | 0.301468 | 2_2:-10992172 | Msa0237730:CDS |
| GTTCTGGACATTTAACCATT+TGG | 0.305839 | 2_2:-10991623 | Msa0237730:CDS |
| CTCAACCTTGCAGGTACTTC+AGG | 0.309154 | 2_2:-10990615 | Msa0237730:intron |
| AGAATGCTTCAACCAGTTAA+AGG | 0.315611 | 2_2:-10990990 | Msa0237730:CDS |
| TTGTGATTGAGCTGGCTATC+TGG | 0.318632 | 2_2:-10990394 | Msa0237730:CDS |
| TTCTGGACATTTAACCATTT+GGG | 0.320238 | 2_2:-10991622 | Msa0237730:CDS |
| ATATTTGATCATCCGAATTA+CGG | 0.332028 | 2_2:-10991646 | Msa0237730:CDS |
| ATCCTAGGAACCTTTGTTGC+TGG | 0.337387 | 2_2:+10990425 | None:intergenic |
| TGTGTGAAATCTACGATCTT+TGG | 0.338067 | 2_2:+10991526 | None:intergenic |
| AAGCTCATCAGGCATAATTA+TGG | 0.339197 | 2_2:-10992285 | Msa0237730:CDS |
| ATTAAGCTACTGTGAACTAT+TGG | 0.365420 | 2_2:-10992142 | Msa0237730:CDS |
| GACGATACACTTCAAAAGAT+TGG | 0.367058 | 2_2:-10991898 | Msa0237730:CDS |
| ATTCTTTATACTTTGAAGAA+TGG | 0.368470 | 2_2:+10992548 | None:intergenic |
| AGATTCACGGTTCCTCTTAT+CGG | 0.371736 | 2_2:+10992242 | None:intergenic |
| CGTCTCTTCTACAAACTAAC+AGG | 0.375602 | 2_2:-10991711 | Msa0237730:CDS |
| CACTAGGGATGGTTTCTATC+AGG | 0.380380 | 2_2:-10992089 | Msa0237730:CDS |
| TGATGGATTGAAAATGGATA+TGG | 0.381393 | 2_2:-10992019 | Msa0237730:CDS |
| GTTAACAAAGAGTGTGAGTT+AGG | 0.390336 | 2_2:-10992114 | Msa0237730:CDS |
| CACGACAATTGTGGAAAGAT+TGG | 0.391781 | 2_2:-10991568 | Msa0237730:CDS |
| TATTTGATCATCCGAATTAC+GGG | 0.392674 | 2_2:-10991645 | Msa0237730:CDS |
| TGGGCAACTGTTGTCCTTCT+CGG | 0.394935 | 2_2:-10992747 | Msa0237730:CDS |
| AATGAATAAATTACTGAGTC+AGG | 0.402185 | 2_2:+10990088 | None:intergenic |
| GACTAGTTGAGATGTTGAAT+TGG | 0.404456 | 2_2:-10991852 | Msa0237730:CDS |
| ACTCTTCAGCAGGCTTTCTT+CGG | 0.405589 | 2_2:+10991501 | None:intergenic |
| TTCTAATGCCAGCATTGATA+AGG | 0.409616 | 2_2:+10991141 | None:intergenic |
| CCTTAGACAAAACAGACTTT+TGG | 0.412358 | 2_2:-10992710 | Msa0237730:CDS |
| ATATCAGCAAGGTTCTCTAT+TGG | 0.414960 | 2_2:-10992353 | Msa0237730:CDS |
| GATCATAAAATTTGTGTAGA+TGG | 0.415054 | 2_2:-10993029 | Msa0237730:CDS |
| AATGTCCAGAACCCGTAATT+CGG | 0.422423 | 2_2:+10991634 | None:intergenic |
| TTCTTAACGGCGGCATTAAT+AGG | 0.423327 | 2_2:+10992516 | None:intergenic |
| AAAATGCTGGCTAGCACAAC+AGG | 0.425073 | 2_2:-10991424 | Msa0237730:CDS |
| GCAACTGGTTTGGGAACTCT+TGG | 0.426382 | 2_2:-10992777 | Msa0237730:CDS |
| TGAGACAGCATTGATGTTGC+TGG | 0.427797 | 2_2:-10990210 | Msa0237730:CDS |
| GTCAATGGAAGTATCTTTGA+TGG | 0.428492 | 2_2:-10992036 | Msa0237730:CDS |
| ACCACAAGGAGGAAGAAATT+AGG | 0.429168 | 2_2:-10991825 | Msa0237730:CDS |
| TGTCTTCGACAAAGCTCATC+AGG | 0.430609 | 2_2:-10992296 | Msa0237730:CDS |
| TGGAATCACTGAGGTTGAAC+TGG | 0.432666 | 2_2:-10990486 | Msa0237730:CDS |
| AAACTCAATGTAAATGTTTG+TGG | 0.436615 | 2_2:+10993081 | None:intergenic |
| TATCTATGAAAACAGACAAA+AGG | 0.436967 | 2_2:+10993107 | None:intergenic |
| AGAACTGTGTTTAAAGAAGC+TGG | 0.438002 | 2_2:-10990506 | Msa0237730:CDS |
| CTGGTACTGTCGGTCTGAAT+CGG | 0.442881 | 2_2:-10990259 | Msa0237730:CDS |
| TGGAATTTCTATATCTTTGG+TGG | 0.445075 | 2_2:-10991878 | Msa0237730:CDS |
| TCACCTGATGAGAAGCTCAT+TGG | 0.447408 | 2_2:-10991964 | Msa0237730:CDS |
| GAATGCTTCAACCAGTTAAA+GGG | 0.454028 | 2_2:-10990989 | Msa0237730:CDS |
| CAACAAAGGTTCCTAGGATA+AGG | 0.460608 | 2_2:-10990421 | Msa0237730:CDS |
| GCCTAATTTCTTCCTCCTTG+TGG | 0.461047 | 2_2:+10991824 | None:intergenic |
| CTTCTCATCAGGTGAGTTTG+AGG | 0.462351 | 2_2:+10991972 | None:intergenic |
| TTCACTGTTTGAATTTGTGA+GGG | 0.466928 | 2_2:+10991466 | None:intergenic |
| CCTCTTATCGGTATCTCCCT+TGG | 0.468969 | 2_2:+10992254 | None:intergenic |
| ATCTATGAAAACAGACAAAA+GGG | 0.469436 | 2_2:+10993108 | None:intergenic |
| GCTCCAATGAGCTTCTCATC+AGG | 0.469702 | 2_2:+10991961 | None:intergenic |
| ACATGGTCTATTACTGAGTC+AGG | 0.469703 | 2_2:-10992609 | Msa0237730:CDS |
| AAAGATGTAACAACTGTTGC+TGG | 0.481484 | 2_2:-10991169 | Msa0237730:CDS |
| CAGAGAAGGCTTATTGGGAG+TGG | 0.482718 | 2_2:-10992167 | Msa0237730:CDS |
| CTTCACTGTTTGAATTTGTG+AGG | 0.483790 | 2_2:+10991465 | None:intergenic |
| AGTCTAGAGAAGAGAGATAG+TGG | 0.485223 | 2_2:-10992903 | Msa0237730:CDS |
| GCTAGCACAACAGGAACATA+TGG | 0.489784 | 2_2:-10991415 | Msa0237730:CDS |
| TGTGTAGATGGAGAAGGAGA+GGG | 0.493272 | 2_2:-10993017 | Msa0237730:CDS |
| TCTTCAAATGGAAGAGGTGT+TGG | 0.496171 | 2_2:-10990330 | Msa0237730:CDS |
| CAGAACTCTCTACGCATAGC+CGG | 0.496626 | 2_2:-10991760 | Msa0237730:CDS |
| CAGTAATAGACCATGTGGCT+TGG | 0.497659 | 2_2:+10992616 | None:intergenic |
| CATTTAGCATATGGTAAAAG+TGG | 0.498997 | 2_2:+10992393 | None:intergenic |
| GTATTTATAAATAGAAACTA+AGG | 0.506629 | 2_2:+10990021 | None:intergenic |
| ATATGTTGAGAGCAGATTCA+CGG | 0.507546 | 2_2:+10992229 | None:intergenic |
| TCAGAATGAGTAGTCCCAAA+TGG | 0.507792 | 2_2:+10991608 | None:intergenic |
| AGCCGGGATACCGGGAGCTA+TGG | 0.508109 | 2_2:-10991743 | Msa0237730:CDS |
| TTTGTTGTTCTTAACAGAGA+AGG | 0.510897 | 2_2:-10992181 | Msa0237730:CDS |
| TCTACGCATAGCCGGGATAC+CGG | 0.510974 | 2_2:-10991752 | Msa0237730:CDS |
| ATCCAGCAACAAAGGTTCCT+AGG | 0.511162 | 2_2:-10990427 | Msa0237730:CDS |
| GGCAAGGCGCAGAGCAAAGA+GGG | 0.511313 | 2_2:+10992815 | None:intergenic |
| TTCCATAGCTCCCGGTATCC+CGG | 0.516444 | 2_2:+10991741 | None:intergenic |
| TAAGGATCTTCAAATGGAAG+AGG | 0.516789 | 2_2:-10990336 | Msa0237730:CDS |
| GACAATTTGCCAACAGTGAG+AGG | 0.519067 | 2_2:-10991927 | Msa0237730:CDS |
| ATGCTCAGTTTCTGTAACAA+GGG | 0.522503 | 2_2:+10991310 | None:intergenic |
| TTGTGTAGATGGAGAAGGAG+AGG | 0.523882 | 2_2:-10993018 | Msa0237730:CDS |
| TATGCTCAGTTTCTGTAACA+AGG | 0.524426 | 2_2:+10991309 | None:intergenic |
| CCAAGGGAGATACCGATAAG+AGG | 0.524891 | 2_2:-10992254 | Msa0237730:CDS |
| TGGTGAGGCCTTATCAATGC+TGG | 0.525276 | 2_2:-10991149 | Msa0237730:CDS |
| AATCTACGATCTTTGGAAGT+AGG | 0.525288 | 2_2:+10991533 | None:intergenic |
| ATCTAGAAGTTGGTGAACTT+AGG | 0.528395 | 2_2:-10992986 | Msa0237730:CDS |
| AAACTACAAGAAGTGATGGT+TGG | 0.530432 | 2_2:-10990572 | Msa0237730:CDS |
| CATATATAATATCATCATCA+TGG | 0.530739 | 2_2:-10993051 | Msa0237730:exon |
| AGTGAAGAGATCCCTGCAGC+TGG | 0.530901 | 2_2:-10991449 | Msa0237730:CDS |
| ATCACAAATCTCCTTATCCT+AGG | 0.532495 | 2_2:+10990410 | None:intergenic |
| GGAAGCATTCATCTAGAAGT+TGG | 0.533313 | 2_2:-10992996 | Msa0237730:CDS |
| CTCTCTTCTCTAGACTGCTA+AGG | 0.533395 | 2_2:+10992910 | None:intergenic |
| ACAGAAAGGATTGGAGGTAC+AGG | 0.536809 | 2_2:-10991250 | Msa0237730:CDS |
| AGAACTCTCTACGCATAGCC+GGG | 0.538497 | 2_2:-10991759 | Msa0237730:CDS |
| AAGGAGATTTGTGATTGAGC+TGG | 0.539129 | 2_2:-10990402 | Msa0237730:CDS |
| GATGAAGCAACAGAAAGGAT+TGG | 0.540913 | 2_2:-10991259 | Msa0237730:CDS |
| TCTTTCTGCAACAGCTTGCG+TGG | 0.541423 | 2_2:-10992322 | Msa0237730:CDS |
| GCAGGAGTCATGAGCTTGAG+TGG | 0.543980 | 2_2:-10992644 | Msa0237730:CDS |
| TGAAGTTGAGAGTGCTCGAA+AGG | 0.545367 | 2_2:-10991093 | Msa0237730:CDS |
| GAGTGTGAGTTAGGACCACT+AGG | 0.550204 | 2_2:-10992105 | Msa0237730:CDS |
| GCACACGATCACGACAATTG+TGG | 0.554014 | 2_2:-10991577 | Msa0237730:CDS |
| TCAAATGGAAGAGGTGTTGG+AGG | 0.554749 | 2_2:-10990327 | Msa0237730:CDS |
| CTACGCATAGCCGGGATACC+GGG | 0.559410 | 2_2:-10991751 | Msa0237730:CDS |
| GCTTATTCGAGGTGTGTCAA+TGG | 0.559627 | 2_2:-10992051 | Msa0237730:CDS |
| CAGTCTAACAATTCACTCAC+TGG | 0.560187 | 2_2:-10990234 | Msa0237730:CDS |
| CGGCAAGGCGCAGAGCAAAG+AGG | 0.560737 | 2_2:+10992814 | None:intergenic |
| CAATCATACTATTGATTGAA+GGG | 0.563333 | 2_2:-10992680 | Msa0237730:CDS |
| AAAGCAAGAGCAACTGTCAT+CGG | 0.564267 | 2_2:-10991120 | Msa0237730:CDS |
| AAAATTTGTGTAGATGGAGA+AGG | 0.565672 | 2_2:-10993023 | Msa0237730:CDS |
| GTCCGAAAACCTCTCACTGT+TGG | 0.568054 | 2_2:+10991918 | None:intergenic |
| CCTGCAGCTGGTGAAAATGC+TGG | 0.571449 | 2_2:-10991437 | Msa0237730:CDS |
| TAGAAGTTGGTGAACTTAGG+AGG | 0.572277 | 2_2:-10992983 | Msa0237730:CDS |
| ACAATCATACTATTGATTGA+AGG | 0.572444 | 2_2:-10992681 | Msa0237730:CDS |
| TGGAAGATGAAGCAACAGAA+AGG | 0.573363 | 2_2:-10991264 | Msa0237730:CDS |
| CTACTGTGAACTATTGGATG+AGG | 0.581383 | 2_2:-10992136 | Msa0237730:CDS |
| AGAAATTAGGCTGTCTGCTG+CGG | 0.581666 | 2_2:-10991812 | Msa0237730:CDS |
| GAATAAACTACAAGAAGTGA+TGG | 0.583093 | 2_2:-10990576 | Msa0237730:CDS |
| TACAATGACATTAGCCTCCA+CGG | 0.583863 | 2_2:+10992479 | None:intergenic |
| AAAGCTTTCAAGCTCTGATG+TGG | 0.585812 | 2_2:+10990292 | None:intergenic |
| TGTAACAACTGTTGCTGGTG+AGG | 0.589546 | 2_2:-10991164 | Msa0237730:CDS |
| TAAATTTCTTAGAATTCTAG+CGG | 0.590367 | 2_2:+10991030 | None:intergenic |
| TTTCGGATAACAGAATTACA+AGG | 0.592854 | 2_2:-10992449 | Msa0237730:CDS |
| CAAGGACAACGACTAGGACG+TGG | 0.596868 | 2_2:-10992431 | Msa0237730:CDS |
| ACAATGTTTGAGCCGCGTCG+TGG | 0.597195 | 2_2:-10992933 | Msa0237730:CDS |
| CATTTCAAGGCATATCAGCA+AGG | 0.597650 | 2_2:-10992364 | Msa0237730:CDS |
| TTCAACAACAGTTAGAGCAC+CGG | 0.601800 | 2_2:-10992850 | Msa0237730:CDS |
| GATATTGATTCCATAGCTCC+CGG | 0.606789 | 2_2:+10991733 | None:intergenic |
| GAAGCAACAGAAAGGATTGG+AGG | 0.608467 | 2_2:-10991256 | Msa0237730:CDS |
| ACATCAATATCCAGCAACAA+AGG | 0.609428 | 2_2:-10990435 | Msa0237730:CDS |
| GAATTACAAGGACAACGACT+AGG | 0.610445 | 2_2:-10992437 | Msa0237730:CDS |
| GCAACTGTTGTCCTTCTCGG+TGG | 0.623019 | 2_2:-10992744 | Msa0237730:CDS |
| GGAAAGATTGGAAATACAAG+AGG | 0.623084 | 2_2:-10991556 | Msa0237730:CDS |
| ATATGTGTGTGAAACTTTCA+GGG | 0.623433 | 2_2:-10990123 | Msa0237730:three_prime_UTR |
| TAATGGCGAAACCACCGAGA+AGG | 0.625805 | 2_2:+10992733 | None:intergenic |
| ACGACGCGGCTCAAACATTG+TGG | 0.627759 | 2_2:+10992935 | None:intergenic |
| GAAAGGATTGGAGGTACAGG+TGG | 0.628385 | 2_2:-10991247 | Msa0237730:CDS |
| TGCTCAGTTTCTGTAACAAG+GGG | 0.628706 | 2_2:+10991311 | None:intergenic |
| TGAGTTAGGACCACTAGGGA+TGG | 0.636410 | 2_2:-10992100 | Msa0237730:CDS |
| CAAATGGAAGAGGTGTTGGA+GGG | 0.636897 | 2_2:-10990326 | Msa0237730:CDS |
| AGAAATTTATGCAACTACAG+TGG | 0.642318 | 2_2:-10991016 | Msa0237730:CDS |
| TAATTATGGAGAGATTGCCA+AGG | 0.649099 | 2_2:-10992271 | Msa0237730:CDS |
| GTTGAATTGGACAGACCACA+AGG | 0.649599 | 2_2:-10991839 | Msa0237730:CDS |
| AGTGGCAGCACCAAGCCACA+TGG | 0.653883 | 2_2:-10992626 | Msa0237730:CDS |
| GTGATCGCTTTGTATCAACA+TGG | 0.654520 | 2_2:+10990170 | None:intergenic |
| AATTATGGAGAGATTGCCAA+GGG | 0.672398 | 2_2:-10992270 | Msa0237730:CDS |
| TCTTAGAAAAGAGATTTCTG+AGG | 0.675088 | 2_2:-10991386 | Msa0237730:CDS |
| CTGATAGAAACCATCCCTAG+TGG | 0.693726 | 2_2:+10992090 | None:intergenic |
| GCGGCACTGACACGAATCAG+CGG | 0.697229 | 2_2:+10991049 | None:intergenic |
| AGGCTAATGTCATTGTACCG+AGG | 0.715726 | 2_2:-10992473 | Msa0237730:CDS |
| TGACTCAGTAATAGACCATG+TGG | 0.721103 | 2_2:+10992611 | None:intergenic |
| TAAAGAAGCTGGAATCACTG+AGG | 0.725394 | 2_2:-10990495 | Msa0237730:CDS |
| AGTGTGAGTTAGGACCACTA+GGG | 0.737164 | 2_2:-10992104 | Msa0237730:CDS |
| ACACAGAAAAGACACCGTGG+AGG | 0.742824 | 2_2:-10992493 | Msa0237730:CDS |
| ATTCTGTTATCCGAAAACCT+CGG | 0.760838 | 2_2:+10992456 | None:intergenic |
| GAAACACAGAAAAGACACCG+TGG | 0.780135 | 2_2:-10992496 | Msa0237730:CDS |
| GAATTGGACAGACCACAAGG+AGG | 0.789179 | 2_2:-10991836 | Msa0237730:CDS |
| AGACTGCTAAGGCCACGACG+CGG | 0.829004 | 2_2:+10992921 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAACATAAGTAATTTTA+AGG | - | chr2_2:10992766-10992785 | Msa0237730:CDS | 15.0% |
| !! | GTATTTATAAATAGAAACTA+AGG | + | chr2_2:10993102-10993121 | None:intergenic | 15.0% |
| !! | CATATATAATATCATCATCA+TGG | - | chr2_2:10990069-10990088 | Msa0237730:three_prime_UTR | 20.0% |
| !!! | ATTCTTTATACTTTGAAGAA+TGG | + | chr2_2:10990575-10990594 | None:intergenic | 20.0% |
| !! | TAAATTTCTTAGAATTCTAG+CGG | + | chr2_2:10992093-10992112 | None:intergenic | 20.0% |
| !! | TTATGAAAACTATCTGAAAA+TGG | - | chr2_2:10992310-10992329 | Msa0237730:CDS | 20.0% |
| !! | CTAAATAGAATAGAAACTTA+GGG | + | chr2_2:10992441-10992460 | None:intergenic | 20.0% |
| !! | ACTAAATAGAATAGAAACTT+AGG | + | chr2_2:10992442-10992461 | None:intergenic | 20.0% |
| !!! | AGATGATATTTTTTAACCAT+CGG | + | chr2_2:10992475-10992494 | None:intergenic | 20.0% |
| !!! | TAATTTTAAGGATCTTCAAA+TGG | - | chr2_2:10992778-10992797 | Msa0237730:CDS | 20.0% |
| ! | AAACTCAATGTAAATGTTTG+TGG | + | chr2_2:10990042-10990061 | None:intergenic | 25.0% |
| ! | GATCATAAAATTTGTGTAGA+TGG | - | chr2_2:10990091-10990110 | Msa0237730:three_prime_UTR | 25.0% |
| !! | ACAATCATACTATTGATTGA+AGG | - | chr2_2:10990439-10990458 | Msa0237730:CDS | 25.0% |
| !! | CAATCATACTATTGATTGAA+GGG | - | chr2_2:10990440-10990459 | Msa0237730:CDS | 25.0% |
| ! | ATGAAAAACCATTTAGCATA+TGG | + | chr2_2:10990739-10990758 | None:intergenic | 25.0% |
| !! | CTAAATGGTTTTTCATTTCA+AGG | - | chr2_2:10990743-10990762 | Msa0237730:intron | 25.0% |
| !! | TCTCAACATATTTTATGCAT+TGG | - | chr2_2:10990903-10990922 | Msa0237730:intron | 25.0% |
| !!! | TATCTTTGATGGATTGAAAA+TGG | - | chr2_2:10991095-10991114 | Msa0237730:CDS | 25.0% |
| ! | GATTGGAATTTCTATATCTT+TGG | - | chr2_2:10991239-10991258 | Msa0237730:CDS | 25.0% |
| ! | ATATTTGATCATCCGAATTA+CGG | - | chr2_2:10991474-10991493 | Msa0237730:CDS | 25.0% |
| !!! | ATCAGAGATATTTTAAGACA+TGG | - | chr2_2:10991777-10991796 | Msa0237730:CDS | 25.0% |
| !!! | AATTTTAACAAGTCTTGCAT+TGG | - | chr2_2:10991836-10991855 | Msa0237730:CDS | 25.0% |
| ! | TTGAAAATAACACTTACTGT+TGG | + | chr2_2:10992173-10992192 | None:intergenic | 25.0% |
| !! | TTTTCATAGGCTCTATAAAA+CGG | - | chr2_2:10992362-10992381 | Msa0237730:CDS | 25.0% |
| ! | GATTTATTTGAGCTTATCTA+TGG | + | chr2_2:10992406-10992425 | None:intergenic | 25.0% |
| !!! | TAGAATCTGGACTAATTTTT+TGG | + | chr2_2:10992660-10992679 | None:intergenic | 25.0% |
| !!! | ATTGATGTTTCTTTAGAATC+TGG | + | chr2_2:10992673-10992692 | None:intergenic | 25.0% |
| ! | AATGAATAAATTACTGAGTC+AGG | + | chr2_2:10993035-10993054 | None:intergenic | 25.0% |
| AAAATTTGTGTAGATGGAGA+AGG | - | chr2_2:10990097-10990116 | Msa0237730:three_prime_UTR | 30.0% | |
| ! | GTCTTTTCTGTGTTTCTTAA+CGG | + | chr2_2:10990620-10990639 | None:intergenic | 30.0% |
| TTTCGGATAACAGAATTACA+AGG | - | chr2_2:10990671-10990690 | Msa0237730:intron | 30.0% | |
| CATTTAGCATATGGTAAAAG+TGG | + | chr2_2:10990730-10990749 | None:intergenic | 30.0% | |
| ! | CACTTTTACCATATGCTAAA+TGG | - | chr2_2:10990728-10990747 | Msa0237730:intron | 30.0% |
| !! | TTTGTTGTTCTTAACAGAGA+AGG | - | chr2_2:10990939-10990958 | Msa0237730:intron | 30.0% |
| ATTAAGCTACTGTGAACTAT+TGG | - | chr2_2:10990978-10990997 | Msa0237730:CDS | 30.0% | |
| ! | TCTTTTATGATGCTTATTCG+AGG | - | chr2_2:10991058-10991077 | Msa0237730:CDS | 30.0% |
| !! | TGATGGATTGAAAATGGATA+TGG | - | chr2_2:10991101-10991120 | Msa0237730:CDS | 30.0% |
| TGGAATTTCTATATCTTTGG+TGG | - | chr2_2:10991242-10991261 | Msa0237730:CDS | 30.0% | |
| ! | GAGATTTTATCAAAACTAGC+AGG | - | chr2_2:10991330-10991349 | Msa0237730:CDS | 30.0% |
| TATTTGATCATCCGAATTAC+GGG | - | chr2_2:10991475-10991494 | Msa0237730:CDS | 30.0% | |
| TTCTGGACATTTAACCATTT+GGG | - | chr2_2:10991498-10991517 | Msa0237730:CDS | 30.0% | |
| TTCACTGTTTGAATTTGTGA+GGG | + | chr2_2:10991657-10991676 | None:intergenic | 30.0% | |
| TCTTAGAAAAGAGATTTCTG+AGG | - | chr2_2:10991734-10991753 | Msa0237730:CDS | 30.0% | |
| AGAAATTTATGCAACTACAG+TGG | - | chr2_2:10992104-10992123 | Msa0237730:CDS | 30.0% | |
| ! | AAGCTCTTCACAATTTTCAT+AGG | - | chr2_2:10992349-10992368 | Msa0237730:CDS | 30.0% |
| TTTAGTAAAATGTCTACCGA+TGG | - | chr2_2:10992456-10992475 | Msa0237730:CDS | 30.0% | |
| GAATAAACTACAAGAAGTGA+TGG | - | chr2_2:10992544-10992563 | Msa0237730:CDS | 30.0% | |
| ATATGTGTGTGAAACTTTCA+GGG | - | chr2_2:10992997-10993016 | Msa0237730:CDS | 30.0% | |
| !! | ATCTAGAAGTTGGTGAACTT+AGG | - | chr2_2:10990134-10990153 | Msa0237730:three_prime_UTR | 35.0% |
| ! | AAGAGGGTAAGTTTCTTTTC+CGG | + | chr2_2:10990292-10990311 | None:intergenic | 35.0% |
| !!! | TGGGAACTCTTGGTTTTATA+TGG | - | chr2_2:10990353-10990372 | Msa0237730:CDS | 35.0% |
| !!! | GGGAACTCTTGGTTTTATAT+GGG | - | chr2_2:10990354-10990373 | Msa0237730:CDS | 35.0% |
| !! | GTCTGTTTTGTCTAAGGTAA+TGG | + | chr2_2:10990407-10990426 | None:intergenic | 35.0% |
| ! | CCAAAAGTCTGTTTTGTCTA+AGG | + | chr2_2:10990413-10990432 | None:intergenic | 35.0% |
| ! | CCTTAGACAAAACAGACTTT+TGG | - | chr2_2:10990410-10990429 | Msa0237730:CDS | 35.0% |
| ! | AGTCAGGAATGCATAGTTTT+CGG | - | chr2_2:10990527-10990546 | Msa0237730:CDS | 35.0% |
| ! | TTTTCTGTGTTTCTTAACGG+CGG | + | chr2_2:10990617-10990636 | None:intergenic | 35.0% |
| ATTCTGTTATCCGAAAACCT+CGG | + | chr2_2:10990667-10990686 | None:intergenic | 35.0% | |
| ATATCAGCAAGGTTCTCTAT+TGG | - | chr2_2:10990767-10990786 | Msa0237730:intron | 35.0% | |
| AAGCTCATCAGGCATAATTA+TGG | - | chr2_2:10990835-10990854 | Msa0237730:intron | 35.0% | |
| TAATTATGGAGAGATTGCCA+AGG | - | chr2_2:10990849-10990868 | Msa0237730:intron | 35.0% | |
| AATTATGGAGAGATTGCCAA+GGG | - | chr2_2:10990850-10990869 | Msa0237730:intron | 35.0% | |
| ATATGTTGAGAGCAGATTCA+CGG | + | chr2_2:10990894-10990913 | None:intergenic | 35.0% | |
| TCTTAACAGAGAAGGCTTAT+TGG | - | chr2_2:10990947-10990966 | Msa0237730:intron | 35.0% | |
| CTTAACAGAGAAGGCTTATT+GGG | - | chr2_2:10990948-10990967 | Msa0237730:intron | 35.0% | |
| ! | GTTAACAAAGAGTGTGAGTT+AGG | - | chr2_2:10991006-10991025 | Msa0237730:CDS | 35.0% |
| !! | GTCAATGGAAGTATCTTTGA+TGG | - | chr2_2:10991084-10991103 | Msa0237730:CDS | 35.0% |
| !! | GTCTTTTGCTATGGATCTTT+TGG | - | chr2_2:10991125-10991144 | Msa0237730:CDS | 35.0% |
| GACGATACACTTCAAAAGAT+TGG | - | chr2_2:10991222-10991241 | Msa0237730:CDS | 35.0% | |
| ! | GACTAGTTGAGATGTTGAAT+TGG | - | chr2_2:10991268-10991287 | Msa0237730:CDS | 35.0% |
| ! | GTTCTGGACATTTAACCATT+TGG | - | chr2_2:10991497-10991516 | Msa0237730:CDS | 35.0% |
| GGAAAGATTGGAAATACAAG+AGG | - | chr2_2:10991564-10991583 | Msa0237730:CDS | 35.0% | |
| ! | AATCTACGATCTTTGGAAGT+AGG | + | chr2_2:10991590-10991609 | None:intergenic | 35.0% |
| TGTGTGAAATCTACGATCTT+TGG | + | chr2_2:10991597-10991616 | None:intergenic | 35.0% | |
| ! | TAACATTTTCACTCTTCAGC+AGG | + | chr2_2:10991632-10991651 | None:intergenic | 35.0% |
| CTTCACTGTTTGAATTTGTG+AGG | + | chr2_2:10991658-10991677 | None:intergenic | 35.0% | |
| ATGCTCAGTTTCTGTAACAA+GGG | + | chr2_2:10991813-10991832 | None:intergenic | 35.0% | |
| TATGCTCAGTTTCTGTAACA+AGG | + | chr2_2:10991814-10991833 | None:intergenic | 35.0% | |
| !!! | GTTACATCTTTCTGGTTTTC+AGG | + | chr2_2:10991942-10991961 | None:intergenic | 35.0% |
| CAACAGTTGTTACATCTTTC+TGG | + | chr2_2:10991950-10991969 | None:intergenic | 35.0% | |
| AAAGATGTAACAACTGTTGC+TGG | - | chr2_2:10991951-10991970 | Msa0237730:CDS | 35.0% | |
| !! | TTCTAATGCCAGCATTGATA+AGG | + | chr2_2:10991982-10992001 | None:intergenic | 35.0% |
| AGAATGCTTCAACCAGTTAA+AGG | - | chr2_2:10992130-10992149 | Msa0237730:CDS | 35.0% | |
| GAATGCTTCAACCAGTTAAA+GGG | - | chr2_2:10992131-10992150 | Msa0237730:CDS | 35.0% | |
| TAAGCTATCCTAGATAGCTT+AGG | + | chr2_2:10992293-10992312 | None:intergenic | 35.0% | |
| AACTATCTGAAAATGGCCTA+TGG | - | chr2_2:10992317-10992336 | Msa0237730:CDS | 35.0% | |
| AGAGCTTCAAAAATGTCCAT+AGG | + | chr2_2:10992336-10992355 | None:intergenic | 35.0% | |
| AAACTACAAGAAGTGATGGT+TGG | - | chr2_2:10992548-10992567 | Msa0237730:CDS | 35.0% | |
| AGAACTGTGTTTAAAGAAGC+TGG | - | chr2_2:10992614-10992633 | Msa0237730:CDS | 35.0% | |
| ACATCAATATCCAGCAACAA+AGG | - | chr2_2:10992685-10992704 | Msa0237730:CDS | 35.0% | |
| ATCACAAATCTCCTTATCCT+AGG | + | chr2_2:10992713-10992732 | None:intergenic | 35.0% | |
| TAAGGATCTTCAAATGGAAG+AGG | - | chr2_2:10992784-10992803 | Msa0237730:CDS | 35.0% | |
| !! | GAAAGCTTTAACGTTTTCTC+TGG | - | chr2_2:10992842-10992861 | Msa0237730:CDS | 35.0% |
| CATATGTGTGTGAAACTTTC+AGG | - | chr2_2:10992996-10993015 | Msa0237730:CDS | 35.0% | |
| !! | GGAAGCATTCATCTAGAAGT+TGG | - | chr2_2:10990124-10990143 | Msa0237730:three_prime_UTR | 40.0% |
| !! | TAGAAGTTGGTGAACTTAGG+AGG | - | chr2_2:10990137-10990156 | Msa0237730:three_prime_UTR | 40.0% |
| AGTCTAGAGAAGAGAGATAG+TGG | - | chr2_2:10990217-10990236 | Msa0237730:CDS | 40.0% | |
| TTCAACAACAGTTAGAGCAC+CGG | - | chr2_2:10990270-10990289 | Msa0237730:CDS | 40.0% | |
| !!! | AGTTGCTGCTTTTTCAAGCA+CGG | + | chr2_2:10990329-10990348 | None:intergenic | 40.0% |
| TGAAAAAGCAGCAACTGGTT+TGG | - | chr2_2:10990333-10990352 | Msa0237730:CDS | 40.0% | |
| ! | GAAAAAGCAGCAACTGGTTT+GGG | - | chr2_2:10990334-10990353 | Msa0237730:CDS | 40.0% |
| TGACTCAGTAATAGACCATG+TGG | + | chr2_2:10990512-10990531 | None:intergenic | 40.0% | |
| ACATGGTCTATTACTGAGTC+AGG | - | chr2_2:10990511-10990530 | Msa0237730:CDS | 40.0% | |
| TTCTTAACGGCGGCATTAAT+AGG | + | chr2_2:10990607-10990626 | None:intergenic | 40.0% | |
| ! | TACAATGACATTAGCCTCCA+CGG | + | chr2_2:10990644-10990663 | None:intergenic | 40.0% |
| ! | TGTCATTGTACCGAGGTTTT+CGG | - | chr2_2:10990654-10990673 | Msa0237730:intron | 40.0% |
| GAATTACAAGGACAACGACT+AGG | - | chr2_2:10990683-10990702 | Msa0237730:intron | 40.0% | |
| CATTTCAAGGCATATCAGCA+AGG | - | chr2_2:10990756-10990775 | Msa0237730:intron | 40.0% | |
| AGATTCACGGTTCCTCTTAT+CGG | + | chr2_2:10990881-10990900 | None:intergenic | 40.0% | |
| CTACTGTGAACTATTGGATG+AGG | - | chr2_2:10990984-10991003 | Msa0237730:CDS | 40.0% | |
| ! | GGATATGGTGTCTTTTGCTA+TGG | - | chr2_2:10991116-10991135 | Msa0237730:CDS | 40.0% |
| ACCACAAGGAGGAAGAAATT+AGG | - | chr2_2:10991295-10991314 | Msa0237730:CDS | 40.0% | |
| !! | GATATTGATTCCATAGCTCC+CGG | + | chr2_2:10991390-10991409 | None:intergenic | 40.0% |
| CGTCTCTTCTACAAACTAAC+AGG | - | chr2_2:10991409-10991428 | Msa0237730:CDS | 40.0% | |
| AATGTCCAGAACCCGTAATT+CGG | + | chr2_2:10991489-10991508 | None:intergenic | 40.0% | |
| TCAGAATGAGTAGTCCCAAA+TGG | + | chr2_2:10991515-10991534 | None:intergenic | 40.0% | |
| CACGACAATTGTGGAAAGAT+TGG | - | chr2_2:10991552-10991571 | Msa0237730:CDS | 40.0% | |
| TGCTCAGTTTCTGTAACAAG+GGG | + | chr2_2:10991812-10991831 | None:intergenic | 40.0% | |
| TGGAAGATGAAGCAACAGAA+AGG | - | chr2_2:10991856-10991875 | Msa0237730:CDS | 40.0% | |
| GATGAAGCAACAGAAAGGAT+TGG | - | chr2_2:10991861-10991880 | Msa0237730:CDS | 40.0% | |
| AAAGCAAGAGCAACTGTCAT+CGG | - | chr2_2:10992000-10992019 | Msa0237730:CDS | 40.0% | |
| CTTTACGAATCTCACATGCT+TGG | + | chr2_2:10992236-10992255 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCCTAAGCTATCT+AGG | - | chr2_2:10992282-10992301 | Msa0237730:CDS | 40.0% |
| TAAAGAAGCTGGAATCACTG+AGG | - | chr2_2:10992625-10992644 | Msa0237730:CDS | 40.0% | |
| CAACAAAGGTTCCTAGGATA+AGG | - | chr2_2:10992699-10992718 | Msa0237730:CDS | 40.0% | |
| AAGGAGATTTGTGATTGAGC+TGG | - | chr2_2:10992718-10992737 | Msa0237730:CDS | 40.0% | |
| ! | TCTTCAAATGGAAGAGGTGT+TGG | - | chr2_2:10992790-10992809 | Msa0237730:CDS | 40.0% |
| ! | AAAGCTTTCAAGCTCTGATG+TGG | + | chr2_2:10992831-10992850 | None:intergenic | 40.0% |
| ! | AACGTTTTCTCTGGTACTGT+CGG | - | chr2_2:10992851-10992870 | Msa0237730:CDS | 40.0% |
| CAGTCTAACAATTCACTCAC+TGG | - | chr2_2:10992886-10992905 | Msa0237730:CDS | 40.0% | |
| GTGATCGCTTTGTATCAACA+TGG | + | chr2_2:10992953-10992972 | None:intergenic | 40.0% | |
| TTGTGTAGATGGAGAAGGAG+AGG | - | chr2_2:10990102-10990121 | Msa0237730:three_prime_UTR | 45.0% | |
| TGTGTAGATGGAGAAGGAGA+GGG | - | chr2_2:10990103-10990122 | Msa0237730:three_prime_UTR | 45.0% | |
| CTCTCTTCTCTAGACTGCTA+AGG | + | chr2_2:10990213-10990232 | None:intergenic | 45.0% | |
| GTGCTTGAAAAAGCAGCAAC+TGG | - | chr2_2:10990328-10990347 | Msa0237730:CDS | 45.0% | |
| CAGTAATAGACCATGTGGCT+TGG | + | chr2_2:10990507-10990526 | None:intergenic | 45.0% | |
| GAAACACAGAAAAGACACCG+TGG | - | chr2_2:10990624-10990643 | Msa0237730:intron | 45.0% | |
| AGGCTAATGTCATTGTACCG+AGG | - | chr2_2:10990647-10990666 | Msa0237730:intron | 45.0% | |
| TGTCTTCGACAAAGCTCATC+AGG | - | chr2_2:10990824-10990843 | Msa0237730:intron | 45.0% | |
| AGTGTGAGTTAGGACCACTA+GGG | - | chr2_2:10991016-10991035 | Msa0237730:CDS | 45.0% | |
| CTGATAGAAACCATCCCTAG+TGG | + | chr2_2:10991033-10991052 | None:intergenic | 45.0% | |
| CACTAGGGATGGTTTCTATC+AGG | - | chr2_2:10991031-10991050 | Msa0237730:CDS | 45.0% | |
| GCTTATTCGAGGTGTGTCAA+TGG | - | chr2_2:10991069-10991088 | Msa0237730:CDS | 45.0% | |
| CTTCTCATCAGGTGAGTTTG+AGG | + | chr2_2:10991151-10991170 | None:intergenic | 45.0% | |
| TCACCTGATGAGAAGCTCAT+TGG | - | chr2_2:10991156-10991175 | Msa0237730:CDS | 45.0% | |
| GACAATTTGCCAACAGTGAG+AGG | - | chr2_2:10991193-10991212 | Msa0237730:CDS | 45.0% | |
| ! | TGCCAACAGTGAGAGGTTTT+CGG | - | chr2_2:10991200-10991219 | Msa0237730:CDS | 45.0% |
| GTTGAATTGGACAGACCACA+AGG | - | chr2_2:10991281-10991300 | Msa0237730:CDS | 45.0% | |
| GCCTAATTTCTTCCTCCTTG+TGG | + | chr2_2:10991299-10991318 | None:intergenic | 45.0% | |
| AGAAATTAGGCTGTCTGCTG+CGG | - | chr2_2:10991308-10991327 | Msa0237730:CDS | 45.0% | |
| ATCATCCGAATTACGGGTTC+TGG | - | chr2_2:10991481-10991500 | Msa0237730:CDS | 45.0% | |
| ACTCTTCAGCAGGCTTTCTT+CGG | + | chr2_2:10991622-10991641 | None:intergenic | 45.0% | |
| ! | AAAATGCTGGCTAGCACAAC+AGG | - | chr2_2:10991696-10991715 | Msa0237730:CDS | 45.0% |
| GCTAGCACAACAGGAACATA+TGG | - | chr2_2:10991705-10991724 | Msa0237730:CDS | 45.0% | |
| GAAGCAACAGAAAGGATTGG+AGG | - | chr2_2:10991864-10991883 | Msa0237730:CDS | 45.0% | |
| ! | ACAGAAAGGATTGGAGGTAC+AGG | - | chr2_2:10991870-10991889 | Msa0237730:CDS | 45.0% |
| TGTAACAACTGTTGCTGGTG+AGG | - | chr2_2:10991956-10991975 | Msa0237730:CDS | 45.0% | |
| !! | TGAAGTTGAGAGTGCTCGAA+AGG | - | chr2_2:10992027-10992046 | Msa0237730:CDS | 45.0% |
| CTGCTGTAACTCCCTTTAAC+TGG | + | chr2_2:10992145-10992164 | None:intergenic | 45.0% | |
| TGGAATCACTGAGGTTGAAC+TGG | - | chr2_2:10992634-10992653 | Msa0237730:CDS | 45.0% | |
| ATCCAGCAACAAAGGTTCCT+AGG | - | chr2_2:10992693-10992712 | Msa0237730:CDS | 45.0% | |
| ATCCTAGGAACCTTTGTTGC+TGG | + | chr2_2:10992698-10992717 | None:intergenic | 45.0% | |
| TTGTGATTGAGCTGGCTATC+TGG | - | chr2_2:10992726-10992745 | Msa0237730:CDS | 45.0% | |
| !! | TCAAATGGAAGAGGTGTTGG+AGG | - | chr2_2:10992793-10992812 | Msa0237730:CDS | 45.0% |
| !! | CAAATGGAAGAGGTGTTGGA+GGG | - | chr2_2:10992794-10992813 | Msa0237730:CDS | 45.0% |
| !! | TGAGACAGCATTGATGTTGC+TGG | - | chr2_2:10992910-10992929 | Msa0237730:CDS | 45.0% |
| !!! | CTGCTTTTTCAAGCACGGCA+AGG | + | chr2_2:10990324-10990343 | None:intergenic | 50.0% |
| !! | GCAACTGGTTTGGGAACTCT+TGG | - | chr2_2:10990343-10990362 | Msa0237730:CDS | 50.0% |
| TGGGCAACTGTTGTCCTTCT+CGG | - | chr2_2:10990373-10990392 | Msa0237730:CDS | 50.0% | |
| TAATGGCGAAACCACCGAGA+AGG | + | chr2_2:10990390-10990409 | None:intergenic | 50.0% | |
| ! | AAGGGACGCGAATTTTCAGC+AGG | - | chr2_2:10990458-10990477 | Msa0237730:CDS | 50.0% |
| ACACAGAAAAGACACCGTGG+AGG | - | chr2_2:10990627-10990646 | Msa0237730:intron | 50.0% | |
| TCTTTCTGCAACAGCTTGCG+TGG | - | chr2_2:10990798-10990817 | Msa0237730:intron | 50.0% | |
| CCTCTTATCGGTATCTCCCT+TGG | + | chr2_2:10990869-10990888 | None:intergenic | 50.0% | |
| CCAAGGGAGATACCGATAAG+AGG | - | chr2_2:10990866-10990885 | Msa0237730:intron | 50.0% | |
| CAGAGAAGGCTTATTGGGAG+TGG | - | chr2_2:10990953-10990972 | Msa0237730:intron | 50.0% | |
| GAGTGTGAGTTAGGACCACT+AGG | - | chr2_2:10991015-10991034 | Msa0237730:CDS | 50.0% | |
| TGAGTTAGGACCACTAGGGA+TGG | - | chr2_2:10991020-10991039 | Msa0237730:CDS | 50.0% | |
| GCTCCAATGAGCTTCTCATC+AGG | + | chr2_2:10991162-10991181 | None:intergenic | 50.0% | |
| GTCCGAAAACCTCTCACTGT+TGG | + | chr2_2:10991205-10991224 | None:intergenic | 50.0% | |
| GAATTGGACAGACCACAAGG+AGG | - | chr2_2:10991284-10991303 | Msa0237730:CDS | 50.0% | |
| CAGAACTCTCTACGCATAGC+CGG | - | chr2_2:10991360-10991379 | Msa0237730:CDS | 50.0% | |
| AGAACTCTCTACGCATAGCC+GGG | - | chr2_2:10991361-10991380 | Msa0237730:CDS | 50.0% | |
| GCACACGATCACGACAATTG+TGG | - | chr2_2:10991543-10991562 | Msa0237730:CDS | 50.0% | |
| ! | CAGCATTTTCACCAGCTGCA+GGG | + | chr2_2:10991685-10991704 | None:intergenic | 50.0% |
| ! | GAAAGGATTGGAGGTACAGG+TGG | - | chr2_2:10991873-10991892 | Msa0237730:CDS | 50.0% |
| ! | TGGTGAGGCCTTATCAATGC+TGG | - | chr2_2:10991971-10991990 | Msa0237730:CDS | 50.0% |
| GTACCTGCAAGGTTGAGGAA+GGG | + | chr2_2:10992502-10992521 | None:intergenic | 50.0% | |
| AGTACCTGCAAGGTTGAGGA+AGG | + | chr2_2:10992503-10992522 | None:intergenic | 50.0% | |
| ! | CTGAAGTACCTGCAAGGTTG+AGG | + | chr2_2:10992507-10992526 | None:intergenic | 50.0% |
| CTCAACCTTGCAGGTACTTC+AGG | - | chr2_2:10992505-10992524 | Msa0237730:CDS | 50.0% | |
| ! | GATTGCCTGAAGTACCTGCA+AGG | + | chr2_2:10992513-10992532 | None:intergenic | 50.0% |
| CTGGTACTGTCGGTCTGAAT+CGG | - | chr2_2:10992861-10992880 | Msa0237730:CDS | 50.0% | |
| ACGACGCGGCTCAAACATTG+TGG | + | chr2_2:10990188-10990207 | None:intergenic | 55.0% | |
| ACAATGTTTGAGCCGCGTCG+TGG | - | chr2_2:10990187-10990206 | Msa0237730:exon | 55.0% | |
| GCAACTGTTGTCCTTCTCGG+TGG | - | chr2_2:10990376-10990395 | Msa0237730:CDS | 55.0% | |
| GCAGGAGTCATGAGCTTGAG+TGG | - | chr2_2:10990476-10990495 | Msa0237730:CDS | 55.0% | |
| CAAGGACAACGACTAGGACG+TGG | - | chr2_2:10990689-10990708 | Msa0237730:intron | 55.0% | |
| TCTACGCATAGCCGGGATAC+CGG | - | chr2_2:10991368-10991387 | Msa0237730:CDS | 55.0% | |
| TTCCATAGCTCCCGGTATCC+CGG | + | chr2_2:10991382-10991401 | None:intergenic | 55.0% | |
| AGTGAAGAGATCCCTGCAGC+TGG | - | chr2_2:10991671-10991690 | Msa0237730:CDS | 55.0% | |
| ! | CCAGCATTTTCACCAGCTGC+AGG | + | chr2_2:10991686-10991705 | None:intergenic | 55.0% |
| CCTGCAGCTGGTGAAAATGC+TGG | - | chr2_2:10991683-10991702 | Msa0237730:CDS | 55.0% | |
| TGACCCTTCCTCAACCTTGC+AGG | - | chr2_2:10992496-10992515 | Msa0237730:CDS | 55.0% | |
| AGACTGCTAAGGCCACGACG+CGG | + | chr2_2:10990202-10990221 | None:intergenic | 60.0% | |
| GGCAAGGCGCAGAGCAAAGA+GGG | + | chr2_2:10990308-10990327 | None:intergenic | 60.0% | |
| AGTGGCAGCACCAAGCCACA+TGG | - | chr2_2:10990494-10990513 | Msa0237730:CDS | 60.0% | |
| CTACGCATAGCCGGGATACC+GGG | - | chr2_2:10991369-10991388 | Msa0237730:CDS | 60.0% | |
| !! | GCGGCACTGACACGAATCAG+CGG | + | chr2_2:10992074-10992093 | None:intergenic | 60.0% |
| CGGCAAGGCGCAGAGCAAAG+AGG | + | chr2_2:10990309-10990328 | None:intergenic | 65.0% | |
| AGCCGGGATACCGGGAGCTA+TGG | - | chr2_2:10991377-10991396 | Msa0237730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 10990014 | 10993128 | 10990014 | ID=Msa0237730;Name=Msa0237730 |
| chr2_2 | mRNA | 10990014 | 10993128 | 10990014 | ID=Msa0237730-mRNA-1;Parent=Msa0237730;Name=Msa0237730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=74|1|1|1|1|1|2|185|837 |
| chr2_2 | exon | 10990014 | 10990624 | 10990014 | ID=Msa0237730-mRNA-1:exon:4829;Parent=Msa0237730-mRNA-1 |
| chr2_2 | exon | 10990967 | 10993128 | 10990967 | ID=Msa0237730-mRNA-1:exon:4828;Parent=Msa0237730-mRNA-1 |
| chr2_2 | five_prime_UTR | 10993055 | 10993128 | 10993055 | ID=Msa0237730-mRNA-1:five_prime_utr;Parent=Msa0237730-mRNA-1 |
| chr2_2 | CDS | 10990967 | 10993054 | 10990967 | ID=Msa0237730-mRNA-1:cds;Parent=Msa0237730-mRNA-1 |
| chr2_2 | CDS | 10990199 | 10990624 | 10990199 | ID=Msa0237730-mRNA-1:cds;Parent=Msa0237730-mRNA-1 |
| chr2_2 | three_prime_UTR | 10990014 | 10990198 | 10990014 | ID=Msa0237730-mRNA-1:three_prime_utr;Parent=Msa0237730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
