Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315800 | XP_003594096.1 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195890 | Msa0315800 | 0.937312 | 4.248386e-98 | -8.615850e-47 |
| Msa0237730 | Msa0315800 | 0.978278 | 1.719633e-145 | -8.615850e-47 |
| Msa0275300 | Msa0315800 | 0.901761 | 1.931379e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315800 | MtrunA17_Chr2g0287251 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1689 |
| Msa0315800 | MtrunA17_Chr4g0065871 | 76.491 | 285 | 66 | 1 | 361 | 644 | 5 | 289 | 3.49e-142 | 421 |
| Msa0315800 | MtrunA17_Chr4g0065861 | 53.628 | 317 | 78 | 10 | 1 | 315 | 1 | 250 | 4.21e-93 | 293 |
| Msa0315800 | MtrunA17_Chr4g0065901 | 77.181 | 149 | 33 | 1 | 343 | 491 | 1 | 148 | 2.44e-70 | 229 |
| Msa0315800 | MtrunA17_Chr4g0065881 | 72.500 | 120 | 33 | 0 | 712 | 831 | 1 | 120 | 6.37e-52 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315800 | AT5G18980.1 | 66.108 | 835 | 255 | 8 | 14 | 834 | 13 | 833 | 0.0 | 1092 |
| Msa0315800 | AT3G06210.1 | 64.720 | 839 | 279 | 7 | 9 | 837 | 7 | 838 | 0.0 | 1040 |
| Msa0315800 | AT5G18980.2 | 68.421 | 646 | 196 | 4 | 197 | 834 | 20 | 665 | 0.0 | 897 |
| Msa0315800 | AT5G18980.3 | 68.421 | 646 | 196 | 4 | 197 | 834 | 20 | 665 | 0.0 | 897 |
| Msa0315800 | AT3G06210.2 | 64.865 | 703 | 230 | 7 | 9 | 701 | 7 | 702 | 0.0 | 872 |
| Msa0315800 | AT4G14280.1 | 57.692 | 780 | 299 | 13 | 65 | 834 | 39 | 797 | 0.0 | 832 |
Find 159 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAGTTGTTACATCTTTC+TGG | 0.114625 | 2_4:+12365833 | None:intergenic |
| CATATGTGTGTGAAACTTTC+AGG | 0.203108 | 2_4:-12364784 | Msa0315800:three_prime_UTR |
| TATCTTTGATGGATTGAAAA+TGG | 0.219392 | 2_4:-12366685 | Msa0315800:CDS |
| GATTGGAATTTCTATATCTT+TGG | 0.246574 | 2_4:-12366541 | Msa0315800:CDS |
| ATCATCCGAATTACGGGTTC+TGG | 0.285947 | 2_4:-12366299 | Msa0315800:CDS |
| TCTTAACAGAGAAGGCTTAT+TGG | 0.287888 | 2_4:-12366833 | Msa0315800:CDS |
| CTGCTGTAACTCCCTTTAAC+TGG | 0.292238 | 2_4:+12365638 | None:intergenic |
| ATTGATGTTTCTTTAGAATC+TGG | 0.294135 | 2_4:+12365110 | None:intergenic |
| CTTAACAGAGAAGGCTTATT+GGG | 0.301468 | 2_4:-12366832 | Msa0315800:CDS |
| GTTCTGGACATTTAACCATT+TGG | 0.305839 | 2_4:-12366283 | Msa0315800:CDS |
| CTCAACCTTGCAGGTACTTC+AGG | 0.309154 | 2_4:-12365275 | Msa0315800:intron |
| AGAATGCTTCAACCAGTTAA+AGG | 0.315611 | 2_4:-12365650 | Msa0315800:CDS |
| TTGTGATTGAGCTGGCTATC+TGG | 0.318632 | 2_4:-12365054 | Msa0315800:CDS |
| TTCTGGACATTTAACCATTT+GGG | 0.320238 | 2_4:-12366282 | Msa0315800:CDS |
| ATATTTGATCATCCGAATTA+CGG | 0.332028 | 2_4:-12366306 | Msa0315800:CDS |
| ATCCTAGGAACCTTTGTTGC+TGG | 0.337387 | 2_4:+12365085 | None:intergenic |
| TGTGTGAAATCTACGATCTT+TGG | 0.338067 | 2_4:+12366186 | None:intergenic |
| AAGCTCATCAGGCATAATTA+TGG | 0.339197 | 2_4:-12366945 | Msa0315800:CDS |
| ATTAAGCTACTGTGAACTAT+TGG | 0.365420 | 2_4:-12366802 | Msa0315800:CDS |
| GACGATACACTTCAAAAGAT+TGG | 0.367058 | 2_4:-12366558 | Msa0315800:CDS |
| ATTCTTTATACTTTGAAGAA+TGG | 0.368470 | 2_4:+12367208 | None:intergenic |
| AGATTCACGGTTCCTCTTAT+CGG | 0.371736 | 2_4:+12366902 | None:intergenic |
| CGTCTCTTCTACAAACTAAC+AGG | 0.375602 | 2_4:-12366371 | Msa0315800:CDS |
| CACTAGGGATGGTTTCTATC+AGG | 0.380380 | 2_4:-12366749 | Msa0315800:CDS |
| TGATGGATTGAAAATGGATA+TGG | 0.381393 | 2_4:-12366679 | Msa0315800:CDS |
| GTTAACAAAGAGTGTGAGTT+AGG | 0.390336 | 2_4:-12366774 | Msa0315800:CDS |
| CACGACAATTGTGGAAAGAT+TGG | 0.391781 | 2_4:-12366228 | Msa0315800:CDS |
| TATTTGATCATCCGAATTAC+GGG | 0.392674 | 2_4:-12366305 | Msa0315800:CDS |
| TGGGCAACTGTTGTCCTTCT+CGG | 0.394935 | 2_4:-12367407 | Msa0315800:CDS |
| AATGAATAAATTACTGAGTC+AGG | 0.402185 | 2_4:+12364748 | None:intergenic |
| GACTAGTTGAGATGTTGAAT+TGG | 0.404456 | 2_4:-12366512 | Msa0315800:CDS |
| ATTCTTCAGCAGGCTTTCTT+CGG | 0.405589 | 2_4:+12366161 | None:intergenic |
| TTCTAATGCCAGCATTGATA+AGG | 0.409616 | 2_4:+12365801 | None:intergenic |
| CCTTAGACAAAACAGACTTT+TGG | 0.412358 | 2_4:-12367370 | Msa0315800:CDS |
| ATATCAGCAAGGTTCTCTAT+TGG | 0.414960 | 2_4:-12367013 | Msa0315800:CDS |
| GATCATAAAATTTGTGTAGA+TGG | 0.415054 | 2_4:-12367689 | Msa0315800:CDS |
| AATGTCCAGAACCCGTAATT+CGG | 0.422423 | 2_4:+12366294 | None:intergenic |
| TTCTTAACGGCGGCATTAAT+AGG | 0.423327 | 2_4:+12367176 | None:intergenic |
| AAAATGCTGGCTAGCACAAC+AGG | 0.425073 | 2_4:-12366084 | Msa0315800:CDS |
| GCAACTGGTTTGGGAACTCT+TGG | 0.426382 | 2_4:-12367437 | Msa0315800:CDS |
| TGAGACAGCATTGATGTTGC+TGG | 0.427797 | 2_4:-12364870 | Msa0315800:CDS |
| GTCAATGGAAGTATCTTTGA+TGG | 0.428492 | 2_4:-12366696 | Msa0315800:CDS |
| ACCACAAGGAGGAAGAAATT+AGG | 0.429168 | 2_4:-12366485 | Msa0315800:CDS |
| TGTCTTCGACAAAGCTCATC+AGG | 0.430609 | 2_4:-12366956 | Msa0315800:CDS |
| TGAAGTTGAGAGTGCTCAAA+AGG | 0.431235 | 2_4:-12365753 | Msa0315800:CDS |
| TGGAATCACTGAGGTTGAAC+TGG | 0.432666 | 2_4:-12365146 | Msa0315800:CDS |
| AAACTCAATGTAAATGTTTG+TGG | 0.436615 | 2_4:+12367741 | None:intergenic |
| TATCTATGAAAACAGACAAA+AGG | 0.436967 | 2_4:+12367767 | None:intergenic |
| AGAACTGTGTTTAAAGAAGC+TGG | 0.438002 | 2_4:-12365166 | Msa0315800:CDS |
| CTGGTACTGTCGGTCTGAAT+CGG | 0.442881 | 2_4:-12364919 | Msa0315800:CDS |
| TGGAATTTCTATATCTTTGG+TGG | 0.445075 | 2_4:-12366538 | Msa0315800:CDS |
| TCACCTGATGAGAAGCTCAT+TGG | 0.447408 | 2_4:-12366624 | Msa0315800:CDS |
| GAATGCTTCAACCAGTTAAA+GGG | 0.454028 | 2_4:-12365649 | Msa0315800:CDS |
| CAACAAAGGTTCCTAGGATA+AGG | 0.460608 | 2_4:-12365081 | Msa0315800:CDS |
| GCCTAATTTCTTCCTCCTTG+TGG | 0.461047 | 2_4:+12366484 | None:intergenic |
| CTTCTCATCAGGTGAGTTTG+AGG | 0.462351 | 2_4:+12366632 | None:intergenic |
| TTCACTGTTTGAATTTGTGA+GGG | 0.466928 | 2_4:+12366126 | None:intergenic |
| CCTCTTATCGGTATCTCCCT+TGG | 0.468969 | 2_4:+12366914 | None:intergenic |
| ATCTATGAAAACAGACAAAA+GGG | 0.469436 | 2_4:+12367768 | None:intergenic |
| GCTCCAATGAGCTTCTCATC+AGG | 0.469702 | 2_4:+12366621 | None:intergenic |
| ACATGGTCTATTACTGAGTC+AGG | 0.469703 | 2_4:-12367269 | Msa0315800:CDS |
| AAAGATGTAACAACTGTTGC+TGG | 0.481484 | 2_4:-12365829 | Msa0315800:CDS |
| CAGAGAAGGCTTATTGGGAG+TGG | 0.482718 | 2_4:-12366827 | Msa0315800:CDS |
| CTTCACTGTTTGAATTTGTG+AGG | 0.483790 | 2_4:+12366125 | None:intergenic |
| AGTCTAGAGAAGAGAGATAG+TGG | 0.485223 | 2_4:-12367563 | Msa0315800:CDS |
| GCTAGCACAACAGGAACATA+TGG | 0.489784 | 2_4:-12366075 | Msa0315800:CDS |
| TGTGTAGATGGAGAAGGAGA+GGG | 0.493272 | 2_4:-12367677 | Msa0315800:CDS |
| TCTTCAAATGGAAGAGGTGT+TGG | 0.496171 | 2_4:-12364990 | Msa0315800:CDS |
| CAGAACTCTCTACGCATAGC+CGG | 0.496626 | 2_4:-12366420 | Msa0315800:CDS |
| CAGTAATAGACCATGTGGCT+TGG | 0.497659 | 2_4:+12367276 | None:intergenic |
| CATTTAGCATATGGTAAAAG+TGG | 0.498997 | 2_4:+12367053 | None:intergenic |
| GTATTTATAAATAGAAACTA+AGG | 0.506629 | 2_4:+12364681 | None:intergenic |
| ATATGTTGAGAGCAGATTCA+CGG | 0.507546 | 2_4:+12366889 | None:intergenic |
| TCAGAATGAGTAGTCCCAAA+TGG | 0.507792 | 2_4:+12366268 | None:intergenic |
| AGCCGGGATACCGGGAGCTA+TGG | 0.508109 | 2_4:-12366403 | Msa0315800:CDS |
| TTTGTTGTTCTTAACAGAGA+AGG | 0.510897 | 2_4:-12366841 | Msa0315800:CDS |
| TCTACGCATAGCCGGGATAC+CGG | 0.510974 | 2_4:-12366412 | Msa0315800:CDS |
| ATCCAGCAACAAAGGTTCCT+AGG | 0.511162 | 2_4:-12365087 | Msa0315800:CDS |
| GGCAAGGCGCAGAGCAAAGA+GGG | 0.511313 | 2_4:+12367475 | None:intergenic |
| TTCCATAGCTCCCGGTATCC+CGG | 0.516444 | 2_4:+12366401 | None:intergenic |
| TAAGGATCTTCAAATGGAAG+AGG | 0.516789 | 2_4:-12364996 | Msa0315800:CDS |
| GACAATTTGCCAACAGTGAG+AGG | 0.519067 | 2_4:-12366587 | Msa0315800:CDS |
| ATGCTCAGTTTCTGTAACAA+GGG | 0.522503 | 2_4:+12365970 | None:intergenic |
| TTGTGTAGATGGAGAAGGAG+AGG | 0.523882 | 2_4:-12367678 | Msa0315800:CDS |
| TATGCTCAGTTTCTGTAACA+AGG | 0.524426 | 2_4:+12365969 | None:intergenic |
| CCAAGGGAGATACCGATAAG+AGG | 0.524891 | 2_4:-12366914 | Msa0315800:CDS |
| TGGTGAGGCCTTATCAATGC+TGG | 0.525276 | 2_4:-12365809 | Msa0315800:CDS |
| AATCTACGATCTTTGGAAGT+AGG | 0.525288 | 2_4:+12366193 | None:intergenic |
| ATCTAGAAGTTGGTGAACTT+AGG | 0.528395 | 2_4:-12367646 | Msa0315800:CDS |
| AAACTACAAGAAGTGATGGT+TGG | 0.530432 | 2_4:-12365232 | Msa0315800:CDS |
| CATATATAATATCATCATCA+TGG | 0.530739 | 2_4:-12367711 | Msa0315800:exon |
| AGTGAAGAGATCCCTGCAGC+TGG | 0.530901 | 2_4:-12366109 | Msa0315800:CDS |
| ATCACAAATCTCCTTATCCT+AGG | 0.532495 | 2_4:+12365070 | None:intergenic |
| GGAAGCATTCATCTAGAAGT+TGG | 0.533313 | 2_4:-12367656 | Msa0315800:CDS |
| CTCTCTTCTCTAGACTGCTA+AGG | 0.533395 | 2_4:+12367570 | None:intergenic |
| ACAGAAAGGATTGGAGGTAC+AGG | 0.536809 | 2_4:-12365910 | Msa0315800:CDS |
| AGAACTCTCTACGCATAGCC+GGG | 0.538497 | 2_4:-12366419 | Msa0315800:CDS |
| AAGGAGATTTGTGATTGAGC+TGG | 0.539129 | 2_4:-12365062 | Msa0315800:CDS |
| GATGAAGCAACAGAAAGGAT+TGG | 0.540913 | 2_4:-12365919 | Msa0315800:CDS |
| TCTTTCTGCAACAGCTTGCG+TGG | 0.541423 | 2_4:-12366982 | Msa0315800:CDS |
| GCAGGAGTCATGAGCTTGAG+TGG | 0.543980 | 2_4:-12367304 | Msa0315800:CDS |
| GAGTGTGAGTTAGGACCACT+AGG | 0.550204 | 2_4:-12366765 | Msa0315800:CDS |
| GCACACGATCACGACAATTG+TGG | 0.554014 | 2_4:-12366237 | Msa0315800:CDS |
| TCAAATGGAAGAGGTGTTGG+AGG | 0.554749 | 2_4:-12364987 | Msa0315800:CDS |
| CTACGCATAGCCGGGATACC+GGG | 0.559410 | 2_4:-12366411 | Msa0315800:CDS |
| GCTTATTCGAGGTGTGTCAA+TGG | 0.559627 | 2_4:-12366711 | Msa0315800:CDS |
| CAGTCTAACAATTCACTCAC+TGG | 0.560187 | 2_4:-12364894 | Msa0315800:CDS |
| CGGCAAGGCGCAGAGCAAAG+AGG | 0.560737 | 2_4:+12367474 | None:intergenic |
| CAATCATACTATTGATTGAA+GGG | 0.563333 | 2_4:-12367340 | Msa0315800:CDS |
| AAAGCAAGAGCAACTGTCAT+CGG | 0.564267 | 2_4:-12365780 | Msa0315800:CDS |
| AAAATTTGTGTAGATGGAGA+AGG | 0.565672 | 2_4:-12367683 | Msa0315800:CDS |
| GTCCGAAAACCTCTCACTGT+TGG | 0.568054 | 2_4:+12366578 | None:intergenic |
| CCTGCAGCTGGTGAAAATGC+TGG | 0.571449 | 2_4:-12366097 | Msa0315800:CDS |
| TAGAAGTTGGTGAACTTAGG+AGG | 0.572277 | 2_4:-12367643 | Msa0315800:CDS |
| ACAATCATACTATTGATTGA+AGG | 0.572444 | 2_4:-12367341 | Msa0315800:CDS |
| TGGAAGATGAAGCAACAGAA+AGG | 0.573363 | 2_4:-12365924 | Msa0315800:CDS |
| CTACTGTGAACTATTGGATG+AGG | 0.581383 | 2_4:-12366796 | Msa0315800:CDS |
| AGAAATTAGGCTGTCTGCTG+CGG | 0.581666 | 2_4:-12366472 | Msa0315800:CDS |
| GAATAAACTACAAGAAGTGA+TGG | 0.583093 | 2_4:-12365236 | Msa0315800:CDS |
| TACAATGACATTAGCCTCCA+CGG | 0.583863 | 2_4:+12367139 | None:intergenic |
| AAAGCTTTCAAGCTCTGATG+TGG | 0.585812 | 2_4:+12364952 | None:intergenic |
| TGTAACAACTGTTGCTGGTG+AGG | 0.589546 | 2_4:-12365824 | Msa0315800:CDS |
| TAAATTTCTTAGAATTCTAG+CGG | 0.590367 | 2_4:+12365690 | None:intergenic |
| TTTCGGATAACAGAATTACA+AGG | 0.592854 | 2_4:-12367109 | Msa0315800:CDS |
| CAAGGACAACGACTAGGACG+TGG | 0.596868 | 2_4:-12367091 | Msa0315800:CDS |
| ACAATGTTTGAGCCGCGTCG+TGG | 0.597195 | 2_4:-12367593 | Msa0315800:CDS |
| CATTTCAAGGCATATCAGCA+AGG | 0.597650 | 2_4:-12367024 | Msa0315800:CDS |
| TTCAACAACAGTTAGAGCAC+CGG | 0.601800 | 2_4:-12367510 | Msa0315800:CDS |
| GATATTGATTCCATAGCTCC+CGG | 0.606789 | 2_4:+12366393 | None:intergenic |
| GAAGCAACAGAAAGGATTGG+AGG | 0.608467 | 2_4:-12365916 | Msa0315800:CDS |
| ACATCAATATCCAGCAACAA+AGG | 0.609428 | 2_4:-12365095 | Msa0315800:CDS |
| GAATTACAAGGACAACGACT+AGG | 0.610445 | 2_4:-12367097 | Msa0315800:CDS |
| GCAACTGTTGTCCTTCTCGG+TGG | 0.623019 | 2_4:-12367404 | Msa0315800:CDS |
| GGAAAGATTGGAAATACAAG+AGG | 0.623084 | 2_4:-12366216 | Msa0315800:CDS |
| ATATGTGTGTGAAACTTTCA+GGG | 0.623433 | 2_4:-12364783 | Msa0315800:three_prime_UTR |
| TAATGGCGAAACCACCGAGA+AGG | 0.625805 | 2_4:+12367393 | None:intergenic |
| ACGACGCGGCTCAAACATTG+TGG | 0.627759 | 2_4:+12367595 | None:intergenic |
| GAAAGGATTGGAGGTACAGG+TGG | 0.628385 | 2_4:-12365907 | Msa0315800:CDS |
| TGCTCAGTTTCTGTAACAAG+GGG | 0.628706 | 2_4:+12365971 | None:intergenic |
| TGAGTTAGGACCACTAGGGA+TGG | 0.636410 | 2_4:-12366760 | Msa0315800:CDS |
| CAAATGGAAGAGGTGTTGGA+GGG | 0.636897 | 2_4:-12364986 | Msa0315800:CDS |
| AGAAATTTATGCAACTACAG+TGG | 0.642318 | 2_4:-12365676 | Msa0315800:CDS |
| TAATTATGGAGAGATTGCCA+AGG | 0.649099 | 2_4:-12366931 | Msa0315800:CDS |
| GTTGAATTGGACAGACCACA+AGG | 0.649599 | 2_4:-12366499 | Msa0315800:CDS |
| AGTGGCAGCACCAAGCCACA+TGG | 0.653883 | 2_4:-12367286 | Msa0315800:CDS |
| GTGATCGCTTTGTATCAACA+TGG | 0.654520 | 2_4:+12364830 | None:intergenic |
| AATTATGGAGAGATTGCCAA+GGG | 0.672398 | 2_4:-12366930 | Msa0315800:CDS |
| TCTTAGAAAAGAGATTTCTG+AGG | 0.675088 | 2_4:-12366046 | Msa0315800:CDS |
| CTGATAGAAACCATCCCTAG+TGG | 0.693726 | 2_4:+12366750 | None:intergenic |
| GCGGCACTGACACGAATCAG+CGG | 0.697229 | 2_4:+12365709 | None:intergenic |
| AGGCTAATGTCATTGTACCG+AGG | 0.715726 | 2_4:-12367133 | Msa0315800:CDS |
| TGACTCAGTAATAGACCATG+TGG | 0.721103 | 2_4:+12367271 | None:intergenic |
| TAAAGAAGCTGGAATCACTG+AGG | 0.725394 | 2_4:-12365155 | Msa0315800:CDS |
| AGTGTGAGTTAGGACCACTA+GGG | 0.737164 | 2_4:-12366764 | Msa0315800:CDS |
| ACACAGAAAAGACACCGTGG+AGG | 0.742824 | 2_4:-12367153 | Msa0315800:CDS |
| ATTCTGTTATCCGAAAACCT+CGG | 0.760838 | 2_4:+12367116 | None:intergenic |
| GAAACACAGAAAAGACACCG+TGG | 0.780135 | 2_4:-12367156 | Msa0315800:CDS |
| GAATTGGACAGACCACAAGG+AGG | 0.789179 | 2_4:-12366496 | Msa0315800:CDS |
| AGACTGCTAAGGCCACGACG+CGG | 0.829004 | 2_4:+12367581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAACATAAGTAATTTTA+AGG | - | chr2_4:12367426-12367445 | Msa0315800:CDS | 15.0% |
| !! | GTATTTATAAATAGAAACTA+AGG | + | chr2_4:12367762-12367781 | None:intergenic | 15.0% |
| !! | CATATATAATATCATCATCA+TGG | - | chr2_4:12364729-12364748 | Msa0315800:three_prime_UTR | 20.0% |
| !!! | ATTCTTTATACTTTGAAGAA+TGG | + | chr2_4:12365235-12365254 | None:intergenic | 20.0% |
| !! | TAAATTTCTTAGAATTCTAG+CGG | + | chr2_4:12366753-12366772 | None:intergenic | 20.0% |
| !! | TTATGAAAACTATCTGAAAA+TGG | - | chr2_4:12366970-12366989 | Msa0315800:CDS | 20.0% |
| !!! | AGATGATATTTTTTAACCAT+CGG | + | chr2_4:12367135-12367154 | None:intergenic | 20.0% |
| !!! | TAATTTTAAGGATCTTCAAA+TGG | - | chr2_4:12367438-12367457 | Msa0315800:CDS | 20.0% |
| ! | AAACTCAATGTAAATGTTTG+TGG | + | chr2_4:12364702-12364721 | None:intergenic | 25.0% |
| ! | GATCATAAAATTTGTGTAGA+TGG | - | chr2_4:12364751-12364770 | Msa0315800:three_prime_UTR | 25.0% |
| !! | ACAATCATACTATTGATTGA+AGG | - | chr2_4:12365099-12365118 | Msa0315800:CDS | 25.0% |
| !! | CAATCATACTATTGATTGAA+GGG | - | chr2_4:12365100-12365119 | Msa0315800:CDS | 25.0% |
| ! | ATGAAAAACCATTTAGCATA+TGG | + | chr2_4:12365399-12365418 | None:intergenic | 25.0% |
| !! | CTAAATGGTTTTTCATTTCA+AGG | - | chr2_4:12365403-12365422 | Msa0315800:intron | 25.0% |
| !! | TCTCAACATATTTTATGCAT+TGG | - | chr2_4:12365563-12365582 | Msa0315800:intron | 25.0% |
| !!! | TATCTTTGATGGATTGAAAA+TGG | - | chr2_4:12365755-12365774 | Msa0315800:CDS | 25.0% |
| ! | GATTGGAATTTCTATATCTT+TGG | - | chr2_4:12365899-12365918 | Msa0315800:CDS | 25.0% |
| ! | ATATTTGATCATCCGAATTA+CGG | - | chr2_4:12366134-12366153 | Msa0315800:CDS | 25.0% |
| !!! | ATCAGAGATATTTTAAGACA+TGG | - | chr2_4:12366437-12366456 | Msa0315800:CDS | 25.0% |
| !!! | AATTTTAACAAGTCTTGCAT+TGG | - | chr2_4:12366496-12366515 | Msa0315800:CDS | 25.0% |
| ! | TTGAAAATAACACTTACTGT+TGG | + | chr2_4:12366833-12366852 | None:intergenic | 25.0% |
| ! | TGGAATTGTTAGATAAAACT+TGG | + | chr2_4:12366876-12366895 | None:intergenic | 25.0% |
| !! | TTTTCATAGGCTCTATAAAA+CGG | - | chr2_4:12367022-12367041 | Msa0315800:CDS | 25.0% |
| ! | CTAAATAGAATAGAAACGTA+GGG | + | chr2_4:12367101-12367120 | None:intergenic | 25.0% |
| ! | ACTAAATAGAATAGAAACGT+AGG | + | chr2_4:12367102-12367121 | None:intergenic | 25.0% |
| !!! | TAGAATCTGGACTAATTTTT+TGG | + | chr2_4:12367320-12367339 | None:intergenic | 25.0% |
| !!! | ATTGATGTTTCTTTAGAATC+TGG | + | chr2_4:12367333-12367352 | None:intergenic | 25.0% |
| ! | AATGAATAAATTACTGAGTC+AGG | + | chr2_4:12367695-12367714 | None:intergenic | 25.0% |
| AAAATTTGTGTAGATGGAGA+AGG | - | chr2_4:12364757-12364776 | Msa0315800:three_prime_UTR | 30.0% | |
| ! | GTCTTTTCTGTGTTTCTTAA+CGG | + | chr2_4:12365280-12365299 | None:intergenic | 30.0% |
| TTTCGGATAACAGAATTACA+AGG | - | chr2_4:12365331-12365350 | Msa0315800:intron | 30.0% | |
| CATTTAGCATATGGTAAAAG+TGG | + | chr2_4:12365390-12365409 | None:intergenic | 30.0% | |
| ! | CACTTTTACCATATGCTAAA+TGG | - | chr2_4:12365388-12365407 | Msa0315800:intron | 30.0% |
| !! | TTTGTTGTTCTTAACAGAGA+AGG | - | chr2_4:12365599-12365618 | Msa0315800:intron | 30.0% |
| ATTAAGCTACTGTGAACTAT+TGG | - | chr2_4:12365638-12365657 | Msa0315800:CDS | 30.0% | |
| ! | TCTTTTATGATGCTTATTCG+AGG | - | chr2_4:12365718-12365737 | Msa0315800:CDS | 30.0% |
| !! | TGATGGATTGAAAATGGATA+TGG | - | chr2_4:12365761-12365780 | Msa0315800:CDS | 30.0% |
| TGGAATTTCTATATCTTTGG+TGG | - | chr2_4:12365902-12365921 | Msa0315800:CDS | 30.0% | |
| ! | GAGATTTTATCAAAACTAGC+AGG | - | chr2_4:12365990-12366009 | Msa0315800:CDS | 30.0% |
| TATTTGATCATCCGAATTAC+GGG | - | chr2_4:12366135-12366154 | Msa0315800:CDS | 30.0% | |
| TTCTGGACATTTAACCATTT+GGG | - | chr2_4:12366158-12366177 | Msa0315800:CDS | 30.0% | |
| ! | TAACATTTTCATTCTTCAGC+AGG | + | chr2_4:12366292-12366311 | None:intergenic | 30.0% |
| TTCACTGTTTGAATTTGTGA+GGG | + | chr2_4:12366317-12366336 | None:intergenic | 30.0% | |
| TCTTAGAAAAGAGATTTCTG+AGG | - | chr2_4:12366394-12366413 | Msa0315800:CDS | 30.0% | |
| AGAAATTTATGCAACTACAG+TGG | - | chr2_4:12366764-12366783 | Msa0315800:CDS | 30.0% | |
| ! | AAGCTCTTCACAATTTTCAT+AGG | - | chr2_4:12367009-12367028 | Msa0315800:CDS | 30.0% |
| GACTTATTTGAGCTTATCTA+TGG | + | chr2_4:12367066-12367085 | None:intergenic | 30.0% | |
| TTTAGTAAAATGTCTACCGA+TGG | - | chr2_4:12367116-12367135 | Msa0315800:CDS | 30.0% | |
| GAATAAACTACAAGAAGTGA+TGG | - | chr2_4:12367204-12367223 | Msa0315800:CDS | 30.0% | |
| ATATGTGTGTGAAACTTTCA+GGG | - | chr2_4:12367657-12367676 | Msa0315800:CDS | 30.0% | |
| !! | ATCTAGAAGTTGGTGAACTT+AGG | - | chr2_4:12364794-12364813 | Msa0315800:three_prime_UTR | 35.0% |
| ! | AAGAGGGTAAGTTTCTTTTC+CGG | + | chr2_4:12364952-12364971 | None:intergenic | 35.0% |
| !!! | TGGGAACTCTTGGTTTTATA+TGG | - | chr2_4:12365013-12365032 | Msa0315800:CDS | 35.0% |
| !!! | GGGAACTCTTGGTTTTATAT+GGG | - | chr2_4:12365014-12365033 | Msa0315800:CDS | 35.0% |
| !! | GTCTGTTTTGTCTAAGGTAA+TGG | + | chr2_4:12365067-12365086 | None:intergenic | 35.0% |
| ! | CCAAAAGTCTGTTTTGTCTA+AGG | + | chr2_4:12365073-12365092 | None:intergenic | 35.0% |
| ! | CCTTAGACAAAACAGACTTT+TGG | - | chr2_4:12365070-12365089 | Msa0315800:CDS | 35.0% |
| ! | AGTCAGGAATGCATAGTTTT+CGG | - | chr2_4:12365187-12365206 | Msa0315800:CDS | 35.0% |
| ! | TTTTCTGTGTTTCTTAACGG+CGG | + | chr2_4:12365277-12365296 | None:intergenic | 35.0% |
| ATTCTGTTATCCGAAAACCT+CGG | + | chr2_4:12365327-12365346 | None:intergenic | 35.0% | |
| ATATCAGCAAGGTTCTCTAT+TGG | - | chr2_4:12365427-12365446 | Msa0315800:intron | 35.0% | |
| AAGCTCATCAGGCATAATTA+TGG | - | chr2_4:12365495-12365514 | Msa0315800:intron | 35.0% | |
| TAATTATGGAGAGATTGCCA+AGG | - | chr2_4:12365509-12365528 | Msa0315800:intron | 35.0% | |
| AATTATGGAGAGATTGCCAA+GGG | - | chr2_4:12365510-12365529 | Msa0315800:intron | 35.0% | |
| ATATGTTGAGAGCAGATTCA+CGG | + | chr2_4:12365554-12365573 | None:intergenic | 35.0% | |
| TCTTAACAGAGAAGGCTTAT+TGG | - | chr2_4:12365607-12365626 | Msa0315800:intron | 35.0% | |
| CTTAACAGAGAAGGCTTATT+GGG | - | chr2_4:12365608-12365627 | Msa0315800:intron | 35.0% | |
| ! | GTTAACAAAGAGTGTGAGTT+AGG | - | chr2_4:12365666-12365685 | Msa0315800:CDS | 35.0% |
| !! | GTCAATGGAAGTATCTTTGA+TGG | - | chr2_4:12365744-12365763 | Msa0315800:CDS | 35.0% |
| !! | GTCTTTTGCTATGGATCTTT+TGG | - | chr2_4:12365785-12365804 | Msa0315800:CDS | 35.0% |
| GACGATACACTTCAAAAGAT+TGG | - | chr2_4:12365882-12365901 | Msa0315800:CDS | 35.0% | |
| ! | GACTAGTTGAGATGTTGAAT+TGG | - | chr2_4:12365928-12365947 | Msa0315800:CDS | 35.0% |
| ! | GTTCTGGACATTTAACCATT+TGG | - | chr2_4:12366157-12366176 | Msa0315800:CDS | 35.0% |
| GGAAAGATTGGAAATACAAG+AGG | - | chr2_4:12366224-12366243 | Msa0315800:CDS | 35.0% | |
| ! | AATCTACGATCTTTGGAAGT+AGG | + | chr2_4:12366250-12366269 | None:intergenic | 35.0% |
| TGTGTGAAATCTACGATCTT+TGG | + | chr2_4:12366257-12366276 | None:intergenic | 35.0% | |
| CTTCACTGTTTGAATTTGTG+AGG | + | chr2_4:12366318-12366337 | None:intergenic | 35.0% | |
| ATGCTCAGTTTCTGTAACAA+GGG | + | chr2_4:12366473-12366492 | None:intergenic | 35.0% | |
| TATGCTCAGTTTCTGTAACA+AGG | + | chr2_4:12366474-12366493 | None:intergenic | 35.0% | |
| !!! | GTTACATCTTTCTGGTTTTC+AGG | + | chr2_4:12366602-12366621 | None:intergenic | 35.0% |
| CAACAGTTGTTACATCTTTC+TGG | + | chr2_4:12366610-12366629 | None:intergenic | 35.0% | |
| AAAGATGTAACAACTGTTGC+TGG | - | chr2_4:12366611-12366630 | Msa0315800:CDS | 35.0% | |
| !! | TTCTAATGCCAGCATTGATA+AGG | + | chr2_4:12366642-12366661 | None:intergenic | 35.0% |
| AGAATGCTTCAACCAGTTAA+AGG | - | chr2_4:12366790-12366809 | Msa0315800:CDS | 35.0% | |
| GAATGCTTCAACCAGTTAAA+GGG | - | chr2_4:12366791-12366810 | Msa0315800:CDS | 35.0% | |
| !! | GCTGTTTTCATAAGCTATCT+AGG | - | chr2_4:12366942-12366961 | Msa0315800:CDS | 35.0% |
| AACTATCTGAAAATGGCCTA+TGG | - | chr2_4:12366977-12366996 | Msa0315800:CDS | 35.0% | |
| AGAGCTTCAAAAATGTCCAT+AGG | + | chr2_4:12366996-12367015 | None:intergenic | 35.0% | |
| AAACTACAAGAAGTGATGGT+TGG | - | chr2_4:12367208-12367227 | Msa0315800:CDS | 35.0% | |
| AGAACTGTGTTTAAAGAAGC+TGG | - | chr2_4:12367274-12367293 | Msa0315800:CDS | 35.0% | |
| ACATCAATATCCAGCAACAA+AGG | - | chr2_4:12367345-12367364 | Msa0315800:CDS | 35.0% | |
| ATCACAAATCTCCTTATCCT+AGG | + | chr2_4:12367373-12367392 | None:intergenic | 35.0% | |
| TAAGGATCTTCAAATGGAAG+AGG | - | chr2_4:12367444-12367463 | Msa0315800:CDS | 35.0% | |
| !! | GAAAGCTTTAACGTTTTCTC+TGG | - | chr2_4:12367502-12367521 | Msa0315800:CDS | 35.0% |
| CATATGTGTGTGAAACTTTC+AGG | - | chr2_4:12367656-12367675 | Msa0315800:CDS | 35.0% | |
| !! | GGAAGCATTCATCTAGAAGT+TGG | - | chr2_4:12364784-12364803 | Msa0315800:three_prime_UTR | 40.0% |
| !! | TAGAAGTTGGTGAACTTAGG+AGG | - | chr2_4:12364797-12364816 | Msa0315800:three_prime_UTR | 40.0% |
| AGTCTAGAGAAGAGAGATAG+TGG | - | chr2_4:12364877-12364896 | Msa0315800:CDS | 40.0% | |
| TTCAACAACAGTTAGAGCAC+CGG | - | chr2_4:12364930-12364949 | Msa0315800:CDS | 40.0% | |
| !!! | AGTTGCTGCTTTTTCAAGCA+CGG | + | chr2_4:12364989-12365008 | None:intergenic | 40.0% |
| TGAAAAAGCAGCAACTGGTT+TGG | - | chr2_4:12364993-12365012 | Msa0315800:CDS | 40.0% | |
| ! | GAAAAAGCAGCAACTGGTTT+GGG | - | chr2_4:12364994-12365013 | Msa0315800:CDS | 40.0% |
| TGACTCAGTAATAGACCATG+TGG | + | chr2_4:12365172-12365191 | None:intergenic | 40.0% | |
| ACATGGTCTATTACTGAGTC+AGG | - | chr2_4:12365171-12365190 | Msa0315800:CDS | 40.0% | |
| TTCTTAACGGCGGCATTAAT+AGG | + | chr2_4:12365267-12365286 | None:intergenic | 40.0% | |
| ! | TACAATGACATTAGCCTCCA+CGG | + | chr2_4:12365304-12365323 | None:intergenic | 40.0% |
| ! | TGTCATTGTACCGAGGTTTT+CGG | - | chr2_4:12365314-12365333 | Msa0315800:intron | 40.0% |
| GAATTACAAGGACAACGACT+AGG | - | chr2_4:12365343-12365362 | Msa0315800:intron | 40.0% | |
| CATTTCAAGGCATATCAGCA+AGG | - | chr2_4:12365416-12365435 | Msa0315800:intron | 40.0% | |
| AGATTCACGGTTCCTCTTAT+CGG | + | chr2_4:12365541-12365560 | None:intergenic | 40.0% | |
| CTACTGTGAACTATTGGATG+AGG | - | chr2_4:12365644-12365663 | Msa0315800:CDS | 40.0% | |
| ! | GGATATGGTGTCTTTTGCTA+TGG | - | chr2_4:12365776-12365795 | Msa0315800:CDS | 40.0% |
| ACCACAAGGAGGAAGAAATT+AGG | - | chr2_4:12365955-12365974 | Msa0315800:CDS | 40.0% | |
| !! | GATATTGATTCCATAGCTCC+CGG | + | chr2_4:12366050-12366069 | None:intergenic | 40.0% |
| CGTCTCTTCTACAAACTAAC+AGG | - | chr2_4:12366069-12366088 | Msa0315800:CDS | 40.0% | |
| AATGTCCAGAACCCGTAATT+CGG | + | chr2_4:12366149-12366168 | None:intergenic | 40.0% | |
| TCAGAATGAGTAGTCCCAAA+TGG | + | chr2_4:12366175-12366194 | None:intergenic | 40.0% | |
| CACGACAATTGTGGAAAGAT+TGG | - | chr2_4:12366212-12366231 | Msa0315800:CDS | 40.0% | |
| ATTCTTCAGCAGGCTTTCTT+CGG | + | chr2_4:12366282-12366301 | None:intergenic | 40.0% | |
| TGCTCAGTTTCTGTAACAAG+GGG | + | chr2_4:12366472-12366491 | None:intergenic | 40.0% | |
| TGGAAGATGAAGCAACAGAA+AGG | - | chr2_4:12366516-12366535 | Msa0315800:CDS | 40.0% | |
| GATGAAGCAACAGAAAGGAT+TGG | - | chr2_4:12366521-12366540 | Msa0315800:CDS | 40.0% | |
| AAAGCAAGAGCAACTGTCAT+CGG | - | chr2_4:12366660-12366679 | Msa0315800:CDS | 40.0% | |
| !! | TGAAGTTGAGAGTGCTCAAA+AGG | - | chr2_4:12366687-12366706 | Msa0315800:CDS | 40.0% |
| CTTTACGAATCTCACATGCT+TGG | + | chr2_4:12366896-12366915 | None:intergenic | 40.0% | |
| TAAAGAAGCTGGAATCACTG+AGG | - | chr2_4:12367285-12367304 | Msa0315800:CDS | 40.0% | |
| CAACAAAGGTTCCTAGGATA+AGG | - | chr2_4:12367359-12367378 | Msa0315800:CDS | 40.0% | |
| AAGGAGATTTGTGATTGAGC+TGG | - | chr2_4:12367378-12367397 | Msa0315800:CDS | 40.0% | |
| ! | TCTTCAAATGGAAGAGGTGT+TGG | - | chr2_4:12367450-12367469 | Msa0315800:CDS | 40.0% |
| ! | AAAGCTTTCAAGCTCTGATG+TGG | + | chr2_4:12367491-12367510 | None:intergenic | 40.0% |
| ! | AACGTTTTCTCTGGTACTGT+CGG | - | chr2_4:12367511-12367530 | Msa0315800:CDS | 40.0% |
| CAGTCTAACAATTCACTCAC+TGG | - | chr2_4:12367546-12367565 | Msa0315800:CDS | 40.0% | |
| GTGATCGCTTTGTATCAACA+TGG | + | chr2_4:12367613-12367632 | None:intergenic | 40.0% | |
| TTGTGTAGATGGAGAAGGAG+AGG | - | chr2_4:12364762-12364781 | Msa0315800:three_prime_UTR | 45.0% | |
| TGTGTAGATGGAGAAGGAGA+GGG | - | chr2_4:12364763-12364782 | Msa0315800:three_prime_UTR | 45.0% | |
| CTCTCTTCTCTAGACTGCTA+AGG | + | chr2_4:12364873-12364892 | None:intergenic | 45.0% | |
| GTGCTTGAAAAAGCAGCAAC+TGG | - | chr2_4:12364988-12365007 | Msa0315800:CDS | 45.0% | |
| CAGTAATAGACCATGTGGCT+TGG | + | chr2_4:12365167-12365186 | None:intergenic | 45.0% | |
| GAAACACAGAAAAGACACCG+TGG | - | chr2_4:12365284-12365303 | Msa0315800:intron | 45.0% | |
| AGGCTAATGTCATTGTACCG+AGG | - | chr2_4:12365307-12365326 | Msa0315800:intron | 45.0% | |
| TGTCTTCGACAAAGCTCATC+AGG | - | chr2_4:12365484-12365503 | Msa0315800:intron | 45.0% | |
| AGTGTGAGTTAGGACCACTA+GGG | - | chr2_4:12365676-12365695 | Msa0315800:CDS | 45.0% | |
| CTGATAGAAACCATCCCTAG+TGG | + | chr2_4:12365693-12365712 | None:intergenic | 45.0% | |
| CACTAGGGATGGTTTCTATC+AGG | - | chr2_4:12365691-12365710 | Msa0315800:CDS | 45.0% | |
| GCTTATTCGAGGTGTGTCAA+TGG | - | chr2_4:12365729-12365748 | Msa0315800:CDS | 45.0% | |
| CTTCTCATCAGGTGAGTTTG+AGG | + | chr2_4:12365811-12365830 | None:intergenic | 45.0% | |
| TCACCTGATGAGAAGCTCAT+TGG | - | chr2_4:12365816-12365835 | Msa0315800:CDS | 45.0% | |
| GACAATTTGCCAACAGTGAG+AGG | - | chr2_4:12365853-12365872 | Msa0315800:CDS | 45.0% | |
| ! | TGCCAACAGTGAGAGGTTTT+CGG | - | chr2_4:12365860-12365879 | Msa0315800:CDS | 45.0% |
| GTTGAATTGGACAGACCACA+AGG | - | chr2_4:12365941-12365960 | Msa0315800:CDS | 45.0% | |
| GCCTAATTTCTTCCTCCTTG+TGG | + | chr2_4:12365959-12365978 | None:intergenic | 45.0% | |
| AGAAATTAGGCTGTCTGCTG+CGG | - | chr2_4:12365968-12365987 | Msa0315800:CDS | 45.0% | |
| ATCATCCGAATTACGGGTTC+TGG | - | chr2_4:12366141-12366160 | Msa0315800:CDS | 45.0% | |
| ! | AAAATGCTGGCTAGCACAAC+AGG | - | chr2_4:12366356-12366375 | Msa0315800:CDS | 45.0% |
| GCTAGCACAACAGGAACATA+TGG | - | chr2_4:12366365-12366384 | Msa0315800:CDS | 45.0% | |
| GAAGCAACAGAAAGGATTGG+AGG | - | chr2_4:12366524-12366543 | Msa0315800:CDS | 45.0% | |
| ! | ACAGAAAGGATTGGAGGTAC+AGG | - | chr2_4:12366530-12366549 | Msa0315800:CDS | 45.0% |
| TGTAACAACTGTTGCTGGTG+AGG | - | chr2_4:12366616-12366635 | Msa0315800:CDS | 45.0% | |
| CTGCTGTAACTCCCTTTAAC+TGG | + | chr2_4:12366805-12366824 | None:intergenic | 45.0% | |
| TGGAATCACTGAGGTTGAAC+TGG | - | chr2_4:12367294-12367313 | Msa0315800:CDS | 45.0% | |
| ATCCAGCAACAAAGGTTCCT+AGG | - | chr2_4:12367353-12367372 | Msa0315800:CDS | 45.0% | |
| ATCCTAGGAACCTTTGTTGC+TGG | + | chr2_4:12367358-12367377 | None:intergenic | 45.0% | |
| TTGTGATTGAGCTGGCTATC+TGG | - | chr2_4:12367386-12367405 | Msa0315800:CDS | 45.0% | |
| !! | TCAAATGGAAGAGGTGTTGG+AGG | - | chr2_4:12367453-12367472 | Msa0315800:CDS | 45.0% |
| !! | CAAATGGAAGAGGTGTTGGA+GGG | - | chr2_4:12367454-12367473 | Msa0315800:CDS | 45.0% |
| !! | TGAGACAGCATTGATGTTGC+TGG | - | chr2_4:12367570-12367589 | Msa0315800:CDS | 45.0% |
| !!! | CTGCTTTTTCAAGCACGGCA+AGG | + | chr2_4:12364984-12365003 | None:intergenic | 50.0% |
| !! | GCAACTGGTTTGGGAACTCT+TGG | - | chr2_4:12365003-12365022 | Msa0315800:CDS | 50.0% |
| TGGGCAACTGTTGTCCTTCT+CGG | - | chr2_4:12365033-12365052 | Msa0315800:CDS | 50.0% | |
| TAATGGCGAAACCACCGAGA+AGG | + | chr2_4:12365050-12365069 | None:intergenic | 50.0% | |
| ! | AAGGGACGCGAATTTTCAGC+AGG | - | chr2_4:12365118-12365137 | Msa0315800:CDS | 50.0% |
| ACACAGAAAAGACACCGTGG+AGG | - | chr2_4:12365287-12365306 | Msa0315800:intron | 50.0% | |
| TCTTTCTGCAACAGCTTGCG+TGG | - | chr2_4:12365458-12365477 | Msa0315800:intron | 50.0% | |
| CCTCTTATCGGTATCTCCCT+TGG | + | chr2_4:12365529-12365548 | None:intergenic | 50.0% | |
| CCAAGGGAGATACCGATAAG+AGG | - | chr2_4:12365526-12365545 | Msa0315800:intron | 50.0% | |
| CAGAGAAGGCTTATTGGGAG+TGG | - | chr2_4:12365613-12365632 | Msa0315800:intron | 50.0% | |
| GAGTGTGAGTTAGGACCACT+AGG | - | chr2_4:12365675-12365694 | Msa0315800:CDS | 50.0% | |
| TGAGTTAGGACCACTAGGGA+TGG | - | chr2_4:12365680-12365699 | Msa0315800:CDS | 50.0% | |
| GCTCCAATGAGCTTCTCATC+AGG | + | chr2_4:12365822-12365841 | None:intergenic | 50.0% | |
| GTCCGAAAACCTCTCACTGT+TGG | + | chr2_4:12365865-12365884 | None:intergenic | 50.0% | |
| GAATTGGACAGACCACAAGG+AGG | - | chr2_4:12365944-12365963 | Msa0315800:CDS | 50.0% | |
| CAGAACTCTCTACGCATAGC+CGG | - | chr2_4:12366020-12366039 | Msa0315800:CDS | 50.0% | |
| AGAACTCTCTACGCATAGCC+GGG | - | chr2_4:12366021-12366040 | Msa0315800:CDS | 50.0% | |
| GCACACGATCACGACAATTG+TGG | - | chr2_4:12366203-12366222 | Msa0315800:CDS | 50.0% | |
| ! | CAGCATTTTCACCAGCTGCA+GGG | + | chr2_4:12366345-12366364 | None:intergenic | 50.0% |
| ! | GAAAGGATTGGAGGTACAGG+TGG | - | chr2_4:12366533-12366552 | Msa0315800:CDS | 50.0% |
| ! | TGGTGAGGCCTTATCAATGC+TGG | - | chr2_4:12366631-12366650 | Msa0315800:CDS | 50.0% |
| GTACCTGCAAGGTTGAGGAA+GGG | + | chr2_4:12367162-12367181 | None:intergenic | 50.0% | |
| AGTACCTGCAAGGTTGAGGA+AGG | + | chr2_4:12367163-12367182 | None:intergenic | 50.0% | |
| ! | CTGAAGTACCTGCAAGGTTG+AGG | + | chr2_4:12367167-12367186 | None:intergenic | 50.0% |
| CTCAACCTTGCAGGTACTTC+AGG | - | chr2_4:12367165-12367184 | Msa0315800:CDS | 50.0% | |
| ! | GATTGCCTGAAGTACCTGCA+AGG | + | chr2_4:12367173-12367192 | None:intergenic | 50.0% |
| CTGGTACTGTCGGTCTGAAT+CGG | - | chr2_4:12367521-12367540 | Msa0315800:CDS | 50.0% | |
| ACGACGCGGCTCAAACATTG+TGG | + | chr2_4:12364848-12364867 | None:intergenic | 55.0% | |
| ACAATGTTTGAGCCGCGTCG+TGG | - | chr2_4:12364847-12364866 | Msa0315800:exon | 55.0% | |
| GCAACTGTTGTCCTTCTCGG+TGG | - | chr2_4:12365036-12365055 | Msa0315800:CDS | 55.0% | |
| GCAGGAGTCATGAGCTTGAG+TGG | - | chr2_4:12365136-12365155 | Msa0315800:CDS | 55.0% | |
| CAAGGACAACGACTAGGACG+TGG | - | chr2_4:12365349-12365368 | Msa0315800:intron | 55.0% | |
| TCTACGCATAGCCGGGATAC+CGG | - | chr2_4:12366028-12366047 | Msa0315800:CDS | 55.0% | |
| TTCCATAGCTCCCGGTATCC+CGG | + | chr2_4:12366042-12366061 | None:intergenic | 55.0% | |
| AGTGAAGAGATCCCTGCAGC+TGG | - | chr2_4:12366331-12366350 | Msa0315800:CDS | 55.0% | |
| ! | CCAGCATTTTCACCAGCTGC+AGG | + | chr2_4:12366346-12366365 | None:intergenic | 55.0% |
| CCTGCAGCTGGTGAAAATGC+TGG | - | chr2_4:12366343-12366362 | Msa0315800:CDS | 55.0% | |
| TGACCCTTCCTCAACCTTGC+AGG | - | chr2_4:12367156-12367175 | Msa0315800:CDS | 55.0% | |
| AGACTGCTAAGGCCACGACG+CGG | + | chr2_4:12364862-12364881 | None:intergenic | 60.0% | |
| GGCAAGGCGCAGAGCAAAGA+GGG | + | chr2_4:12364968-12364987 | None:intergenic | 60.0% | |
| AGTGGCAGCACCAAGCCACA+TGG | - | chr2_4:12365154-12365173 | Msa0315800:CDS | 60.0% | |
| CTACGCATAGCCGGGATACC+GGG | - | chr2_4:12366029-12366048 | Msa0315800:CDS | 60.0% | |
| !! | GCGGCACTGACACGAATCAG+CGG | + | chr2_4:12366734-12366753 | None:intergenic | 60.0% |
| CGGCAAGGCGCAGAGCAAAG+AGG | + | chr2_4:12364969-12364988 | None:intergenic | 65.0% | |
| AGCCGGGATACCGGGAGCTA+TGG | - | chr2_4:12366037-12366056 | Msa0315800:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 12364674 | 12367788 | 12364674 | ID=Msa0315800;Name=Msa0315800 |
| chr2_4 | mRNA | 12364674 | 12367788 | 12364674 | ID=Msa0315800-mRNA-1;Parent=Msa0315800;Name=Msa0315800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=74|1|1|1|1|1|2|185|837 |
| chr2_4 | exon | 12364674 | 12365284 | 12364674 | ID=Msa0315800-mRNA-1:exon:4740;Parent=Msa0315800-mRNA-1 |
| chr2_4 | exon | 12365627 | 12367788 | 12365627 | ID=Msa0315800-mRNA-1:exon:4739;Parent=Msa0315800-mRNA-1 |
| chr2_4 | five_prime_UTR | 12367715 | 12367788 | 12367715 | ID=Msa0315800-mRNA-1:five_prime_utr;Parent=Msa0315800-mRNA-1 |
| chr2_4 | CDS | 12365627 | 12367714 | 12365627 | ID=Msa0315800-mRNA-1:cds;Parent=Msa0315800-mRNA-1 |
| chr2_4 | CDS | 12364859 | 12365284 | 12364859 | ID=Msa0315800-mRNA-1:cds;Parent=Msa0315800-mRNA-1 |
| chr2_4 | three_prime_UTR | 12364674 | 12364858 | 12364674 | ID=Msa0315800-mRNA-1:three_prime_utr;Parent=Msa0315800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
