Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195890 | XP_003594096.1 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195890 | G7IKE1 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195890 | Msa0237730 | 0.939822 | 6.654664e-100 | -8.615850e-47 |
| Msa0195890 | Msa0275300 | 0.872671 | 2.659194e-67 | -8.615850e-47 |
| Msa0195890 | Msa0315800 | 0.937312 | 4.248386e-98 | -8.615850e-47 |
| Msa0195890 | Msa0871880 | 0.802587 | 5.227988e-49 | -8.615850e-47 |
| Msa0195890 | Msa0905240 | 0.801852 | 7.406119e-49 | -8.615850e-47 |
| Msa0195890 | Msa0974520 | 0.806209 | 9.190425e-50 | -8.615850e-47 |
| Msa0195890 | Msa1397740 | 0.801865 | 7.358476e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195890 | MtrunA17_Chr2g0287251 | 98.447 | 837 | 13 | 0 | 1 | 837 | 1 | 837 | 0.0 | 1687 |
| Msa0195890 | MtrunA17_Chr4g0065871 | 76.491 | 285 | 66 | 1 | 361 | 644 | 5 | 289 | 3.34e-142 | 421 |
| Msa0195890 | MtrunA17_Chr4g0065861 | 53.312 | 317 | 79 | 10 | 1 | 315 | 1 | 250 | 1.73e-92 | 291 |
| Msa0195890 | MtrunA17_Chr4g0065901 | 77.181 | 149 | 33 | 1 | 343 | 491 | 1 | 148 | 2.31e-70 | 229 |
| Msa0195890 | MtrunA17_Chr4g0065881 | 72.500 | 120 | 33 | 0 | 712 | 831 | 1 | 120 | 7.11e-52 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195890 | AT5G18980.1 | 66.228 | 835 | 254 | 8 | 14 | 834 | 13 | 833 | 0.0 | 1092 |
| Msa0195890 | AT3G06210.1 | 64.601 | 839 | 280 | 7 | 9 | 837 | 7 | 838 | 0.0 | 1038 |
| Msa0195890 | AT5G18980.2 | 68.576 | 646 | 195 | 4 | 197 | 834 | 20 | 665 | 0.0 | 898 |
| Msa0195890 | AT5G18980.3 | 68.576 | 646 | 195 | 4 | 197 | 834 | 20 | 665 | 0.0 | 898 |
| Msa0195890 | AT3G06210.2 | 64.723 | 703 | 231 | 7 | 9 | 701 | 7 | 702 | 0.0 | 870 |
| Msa0195890 | AT4G14280.1 | 57.436 | 780 | 301 | 13 | 65 | 834 | 39 | 797 | 0.0 | 828 |
Find 159 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAGTTGTTACATCTTTC+TGG | 0.114625 | 2_1:+12856320 | None:intergenic |
| CATATGTGTGTGAAACTTTC+AGG | 0.203108 | 2_1:-12855280 | Msa0195890:three_prime_UTR |
| TATCTTTGATGGATTGAAAA+TGG | 0.219392 | 2_1:-12857172 | Msa0195890:CDS |
| GATTGGAATTTCTATATCTT+TGG | 0.246574 | 2_1:-12857028 | Msa0195890:CDS |
| ATCATCCGAATTACGGGTTC+TGG | 0.285947 | 2_1:-12856786 | Msa0195890:CDS |
| CTGCTGTAACTCCCTTTAAC+TGG | 0.292238 | 2_1:+12856125 | None:intergenic |
| ATTGATGTTTCTTTAGAATC+TGG | 0.294135 | 2_1:+12855606 | None:intergenic |
| CTTAACAGAGAAGGTTTATT+GGG | 0.301248 | 2_1:-12857319 | Msa0195890:CDS |
| GTTCTGGACATTTAACCATT+TGG | 0.305839 | 2_1:-12856770 | Msa0195890:CDS |
| TCTTAACAGAGAAGGTTTAT+TGG | 0.307818 | 2_1:-12857320 | Msa0195890:CDS |
| CTCAACCTTGCAGGTACTTC+AGG | 0.309154 | 2_1:-12855771 | Msa0195890:intron |
| AGAATGCTTCAACCAGTTAA+AGG | 0.315611 | 2_1:-12856137 | Msa0195890:CDS |
| TTGTGATTGAGCTGGCTATC+TGG | 0.318632 | 2_1:-12855550 | Msa0195890:CDS |
| TTCTGGACATTTAACCATTT+GGG | 0.320238 | 2_1:-12856769 | Msa0195890:CDS |
| ATATTTGATCATCCGAATTA+CGG | 0.332028 | 2_1:-12856793 | Msa0195890:CDS |
| ATCCTAGGAACCTTTGTTGC+TGG | 0.337387 | 2_1:+12855581 | None:intergenic |
| TGTGTGAAATCTACGATCTT+TGG | 0.338067 | 2_1:+12856673 | None:intergenic |
| AAGCTCATCAGGCATAATTA+TGG | 0.339197 | 2_1:-12857432 | Msa0195890:CDS |
| ATTAAGCTACTGTGAACTAT+TGG | 0.365420 | 2_1:-12857289 | Msa0195890:CDS |
| GACGATACACTTCAAAAGAT+TGG | 0.367058 | 2_1:-12857045 | Msa0195890:CDS |
| ATTCTTTATACTTTGAAGAA+TGG | 0.368470 | 2_1:+12857695 | None:intergenic |
| AGATTCACGGTTCCTCTTAT+CGG | 0.371736 | 2_1:+12857389 | None:intergenic |
| CGTCTCTTCTACAAACTAAC+AGG | 0.375602 | 2_1:-12856858 | Msa0195890:CDS |
| CACTAGGGATGGTTTCTATC+AGG | 0.380380 | 2_1:-12857236 | Msa0195890:CDS |
| TGATGGATTGAAAATGGATA+TGG | 0.381393 | 2_1:-12857166 | Msa0195890:CDS |
| ATATTAGCAAGGTTCTCTAT+TGG | 0.384560 | 2_1:-12857500 | Msa0195890:CDS |
| GTTAACAAAGAGTGTGAGTT+AGG | 0.390336 | 2_1:-12857261 | Msa0195890:CDS |
| CACGACAATTGTGGAAAGAT+TGG | 0.391781 | 2_1:-12856715 | Msa0195890:CDS |
| TATTTGATCATCCGAATTAC+GGG | 0.392674 | 2_1:-12856792 | Msa0195890:CDS |
| TGGGCAACTGTTGTCCTTCT+CGG | 0.394935 | 2_1:-12857894 | Msa0195890:CDS |
| AATGAATAAATTACTGAGTC+AGG | 0.402185 | 2_1:+12855244 | None:intergenic |
| GACTAGTTGAGATGTTGAAT+TGG | 0.404456 | 2_1:-12856999 | Msa0195890:CDS |
| ATTCTTCAGCAGGCTTTCTT+CGG | 0.405589 | 2_1:+12856648 | None:intergenic |
| CAGAGAAGGTTTATTGGGAG+TGG | 0.409523 | 2_1:-12857314 | Msa0195890:CDS |
| TTCTAATGCCAGCATTGATA+AGG | 0.409616 | 2_1:+12856288 | None:intergenic |
| CCTTAGACAAAACAGACTTT+TGG | 0.412358 | 2_1:-12857857 | Msa0195890:CDS |
| GATCATAAAATTTGTGTAGA+TGG | 0.415054 | 2_1:-12858176 | Msa0195890:CDS |
| AATGTCCAGAACCCGTAATT+CGG | 0.422423 | 2_1:+12856781 | None:intergenic |
| TTCTTAACGGCGGCATTAAT+AGG | 0.423327 | 2_1:+12857663 | None:intergenic |
| GCAACTGGTTTGGGAACTCT+TGG | 0.426382 | 2_1:-12857924 | Msa0195890:CDS |
| TGAGACAGCATTGATGTTGC+TGG | 0.427797 | 2_1:-12855366 | Msa0195890:CDS |
| GTCAATGGAAGTATCTTTGA+TGG | 0.428492 | 2_1:-12857183 | Msa0195890:CDS |
| ACCACAAGGAGGAAGAAATT+AGG | 0.429168 | 2_1:-12856972 | Msa0195890:CDS |
| TGTCTTCGACAAAGCTCATC+AGG | 0.430609 | 2_1:-12857443 | Msa0195890:CDS |
| TGGAATCACTGAGGTTGAAC+TGG | 0.432666 | 2_1:-12855642 | Msa0195890:CDS |
| AAACTCAATGTAAATGTTTG+TGG | 0.436615 | 2_1:+12858228 | None:intergenic |
| TATCTATGAAAACAGACAAA+AGG | 0.436967 | 2_1:+12858254 | None:intergenic |
| AGAACTGTGTTTAAAGAAGC+TGG | 0.438002 | 2_1:-12855662 | Msa0195890:CDS |
| CTGGTACTGTCGGTCTGAAT+CGG | 0.442881 | 2_1:-12855415 | Msa0195890:CDS |
| TGGAATTTCTATATCTTTGG+TGG | 0.445075 | 2_1:-12857025 | Msa0195890:CDS |
| TCACCTGATGAGAAGCTCAT+TGG | 0.447408 | 2_1:-12857111 | Msa0195890:CDS |
| GAATGCTTCAACCAGTTAAA+GGG | 0.454028 | 2_1:-12856136 | Msa0195890:CDS |
| CAACAAAGGTTCCTAGGATA+AGG | 0.460608 | 2_1:-12855577 | Msa0195890:CDS |
| GCCTAATTTCTTCCTCCTTG+TGG | 0.461047 | 2_1:+12856971 | None:intergenic |
| CTTCTCATCAGGTGAGTTTG+AGG | 0.462351 | 2_1:+12857119 | None:intergenic |
| AAAATGCTGGCTAGTACAAC+AGG | 0.462789 | 2_1:-12856571 | Msa0195890:CDS |
| TTCACTGTTTGAATTTGTGA+GGG | 0.466928 | 2_1:+12856613 | None:intergenic |
| CCTCTTATCGGTATCTCCCT+TGG | 0.468969 | 2_1:+12857401 | None:intergenic |
| ATCTATGAAAACAGACAAAA+GGG | 0.469436 | 2_1:+12858255 | None:intergenic |
| GCTCCAATGAGCTTCTCATC+AGG | 0.469702 | 2_1:+12857108 | None:intergenic |
| ACATGGTCTATTACTGAGTC+AGG | 0.469703 | 2_1:-12857756 | Msa0195890:CDS |
| AAAGATGTAACAACTGTTGC+TGG | 0.481484 | 2_1:-12856316 | Msa0195890:CDS |
| CTTCACTGTTTGAATTTGTG+AGG | 0.483790 | 2_1:+12856612 | None:intergenic |
| AGTCTAGAGAAGAGAGATAG+TGG | 0.485223 | 2_1:-12858050 | Msa0195890:CDS |
| GCTAGTACAACAGGAACATA+TGG | 0.490194 | 2_1:-12856562 | Msa0195890:CDS |
| TGTGTAGATGGAGAAGGAGA+GGG | 0.493272 | 2_1:-12858164 | Msa0195890:CDS |
| TCTTCAAATGGAAGAGGTGT+TGG | 0.496171 | 2_1:-12855486 | Msa0195890:CDS |
| CAGAACTCTCTACGCATAGC+CGG | 0.496626 | 2_1:-12856907 | Msa0195890:CDS |
| CAGTAATAGACCATGTGGCT+TGG | 0.497659 | 2_1:+12857763 | None:intergenic |
| CATTTAGCATATGGTAAAAG+TGG | 0.498997 | 2_1:+12857540 | None:intergenic |
| GTATTTATAAATAGAAACTA+AGG | 0.506629 | 2_1:+12855176 | None:intergenic |
| ATATGTTGAGAGCAGATTCA+CGG | 0.507546 | 2_1:+12857376 | None:intergenic |
| TCAGAATGAGTAGTCCCAAA+TGG | 0.507792 | 2_1:+12856755 | None:intergenic |
| AGCCGGGATACCGGGAGCTA+TGG | 0.508109 | 2_1:-12856890 | Msa0195890:CDS |
| TCTACGCATAGCCGGGATAC+CGG | 0.510974 | 2_1:-12856899 | Msa0195890:CDS |
| ATCCAGCAACAAAGGTTCCT+AGG | 0.511162 | 2_1:-12855583 | Msa0195890:CDS |
| GGCAAGGCGCAGAGCAAAGA+GGG | 0.511313 | 2_1:+12857962 | None:intergenic |
| TTCCATAGCTCCCGGTATCC+CGG | 0.516444 | 2_1:+12856888 | None:intergenic |
| TAAGGATCTTCAAATGGAAG+AGG | 0.516789 | 2_1:-12855492 | Msa0195890:CDS |
| TTTGTTGTTCTTAACAGAGA+AGG | 0.517802 | 2_1:-12857328 | Msa0195890:CDS |
| GACAATTTGCCAACAGTGAG+AGG | 0.519067 | 2_1:-12857074 | Msa0195890:CDS |
| ATGCTCAGTTTCTGTAACAA+GGG | 0.522503 | 2_1:+12856457 | None:intergenic |
| TTGTGTAGATGGAGAAGGAG+AGG | 0.523882 | 2_1:-12858165 | Msa0195890:CDS |
| TATGCTCAGTTTCTGTAACA+AGG | 0.524426 | 2_1:+12856456 | None:intergenic |
| CCAAGGGAGATACCGATAAG+AGG | 0.524891 | 2_1:-12857401 | Msa0195890:CDS |
| TGGTGAGGCCTTATCAATGC+TGG | 0.525276 | 2_1:-12856296 | Msa0195890:CDS |
| AATCTACGATCTTTGGAAGT+AGG | 0.525288 | 2_1:+12856680 | None:intergenic |
| ATCTAGAAGTTGGTGAACTT+AGG | 0.528395 | 2_1:-12858133 | Msa0195890:CDS |
| AAACTACAAGAAGTGATGGT+TGG | 0.530432 | 2_1:-12855728 | Msa0195890:CDS |
| CATATATAATATCATCATCA+TGG | 0.530739 | 2_1:-12858198 | Msa0195890:exon |
| AGTGAAGAGATCCCTGCAGC+TGG | 0.530901 | 2_1:-12856596 | Msa0195890:CDS |
| ATCACAAATCTCCTTATCCT+AGG | 0.532495 | 2_1:+12855566 | None:intergenic |
| GGAAGCATTCATCTAGAAGT+TGG | 0.533313 | 2_1:-12858143 | Msa0195890:CDS |
| CTCTCTTCTCTAGACTGCTA+AGG | 0.533395 | 2_1:+12858057 | None:intergenic |
| ACAGAAAGGATTGGAGGTAC+AGG | 0.536809 | 2_1:-12856397 | Msa0195890:CDS |
| AGAACTCTCTACGCATAGCC+GGG | 0.538497 | 2_1:-12856906 | Msa0195890:CDS |
| AAGGAGATTTGTGATTGAGC+TGG | 0.539129 | 2_1:-12855558 | Msa0195890:CDS |
| GATGAAGCAACAGAAAGGAT+TGG | 0.540913 | 2_1:-12856406 | Msa0195890:CDS |
| TCTTTCTGCAACAGCTTGCG+TGG | 0.541423 | 2_1:-12857469 | Msa0195890:CDS |
| GCAGGAGTCATGAGCTTGAG+TGG | 0.543980 | 2_1:-12857791 | Msa0195890:CDS |
| TGAAGTTGAGAGTGCTCGAA+AGG | 0.545367 | 2_1:-12856240 | Msa0195890:CDS |
| GAGTGTGAGTTAGGACCACT+AGG | 0.550204 | 2_1:-12857252 | Msa0195890:CDS |
| GCACACGATCACGACAATTG+TGG | 0.554014 | 2_1:-12856724 | Msa0195890:CDS |
| TCAAATGGAAGAGGTGTTGG+AGG | 0.554749 | 2_1:-12855483 | Msa0195890:CDS |
| CTACGCATAGCCGGGATACC+GGG | 0.559410 | 2_1:-12856898 | Msa0195890:CDS |
| GCTTATTCGAGGTGTGTCAA+TGG | 0.559627 | 2_1:-12857198 | Msa0195890:CDS |
| CAGTCTAACAATTCACTCAC+TGG | 0.560187 | 2_1:-12855390 | Msa0195890:CDS |
| CGGCAAGGCGCAGAGCAAAG+AGG | 0.560737 | 2_1:+12857961 | None:intergenic |
| CAATCATACTATTGATTGAA+GGG | 0.563333 | 2_1:-12857827 | Msa0195890:CDS |
| AAAGCAAGAGCAACTGTCAT+CGG | 0.564267 | 2_1:-12856267 | Msa0195890:CDS |
| AAAATTTGTGTAGATGGAGA+AGG | 0.565672 | 2_1:-12858170 | Msa0195890:CDS |
| CATTTCAAGGCATATTAGCA+AGG | 0.567196 | 2_1:-12857511 | Msa0195890:CDS |
| GTCCGAAAACCTCTCACTGT+TGG | 0.568054 | 2_1:+12857065 | None:intergenic |
| CCTGCAGCTGGTGAAAATGC+TGG | 0.571449 | 2_1:-12856584 | Msa0195890:CDS |
| TAGAAGTTGGTGAACTTAGG+AGG | 0.572277 | 2_1:-12858130 | Msa0195890:CDS |
| ACAATCATACTATTGATTGA+AGG | 0.572444 | 2_1:-12857828 | Msa0195890:CDS |
| TGGAAGATGAAGCAACAGAA+AGG | 0.573363 | 2_1:-12856411 | Msa0195890:CDS |
| CTACTGTGAACTATTGGATG+AGG | 0.581383 | 2_1:-12857283 | Msa0195890:CDS |
| AGAAATTAGGCTGTCTGCTG+CGG | 0.581666 | 2_1:-12856959 | Msa0195890:CDS |
| GAATAAACTACAAGAAGTGA+TGG | 0.583093 | 2_1:-12855732 | Msa0195890:CDS |
| TACAATGACATTAGCCTCCA+CGG | 0.583863 | 2_1:+12857626 | None:intergenic |
| AAAGCTTTCAAGCTCTGATG+TGG | 0.585812 | 2_1:+12855448 | None:intergenic |
| TGTAACAACTGTTGCTGGTG+AGG | 0.589546 | 2_1:-12856311 | Msa0195890:CDS |
| TAAATTTCTTAGAATTCTAG+CGG | 0.590367 | 2_1:+12856177 | None:intergenic |
| TTTCGGATAACAGAATTACA+AGG | 0.592854 | 2_1:-12857596 | Msa0195890:CDS |
| CAAGGACAACGACTAGGACG+TGG | 0.596868 | 2_1:-12857578 | Msa0195890:CDS |
| ACAATGTTTGAGCCGCGTCG+TGG | 0.597195 | 2_1:-12858080 | Msa0195890:CDS |
| TTCAACAACAGTTAGAGCAC+CGG | 0.601800 | 2_1:-12857997 | Msa0195890:CDS |
| GATATTGATTCCATAGCTCC+CGG | 0.606789 | 2_1:+12856880 | None:intergenic |
| GAAGCAACAGAAAGGATTGG+AGG | 0.608467 | 2_1:-12856403 | Msa0195890:CDS |
| ACATCAATATCCAGCAACAA+AGG | 0.609428 | 2_1:-12855591 | Msa0195890:CDS |
| GAATTACAAGGACAACGACT+AGG | 0.610445 | 2_1:-12857584 | Msa0195890:CDS |
| GCAACTGTTGTCCTTCTCGG+TGG | 0.623019 | 2_1:-12857891 | Msa0195890:CDS |
| GGAAAGATTGGAAATACAAG+AGG | 0.623084 | 2_1:-12856703 | Msa0195890:CDS |
| ATATGTGTGTGAAACTTTCA+GGG | 0.623433 | 2_1:-12855279 | Msa0195890:three_prime_UTR |
| TAATGGCGAAACCACCGAGA+AGG | 0.625805 | 2_1:+12857880 | None:intergenic |
| ACGACGCGGCTCAAACATTG+TGG | 0.627759 | 2_1:+12858082 | None:intergenic |
| GAAAGGATTGGAGGTACAGG+TGG | 0.628385 | 2_1:-12856394 | Msa0195890:CDS |
| TGCTCAGTTTCTGTAACAAG+GGG | 0.628706 | 2_1:+12856458 | None:intergenic |
| TGAGTTAGGACCACTAGGGA+TGG | 0.636410 | 2_1:-12857247 | Msa0195890:CDS |
| CAAATGGAAGAGGTGTTGGA+GGG | 0.636897 | 2_1:-12855482 | Msa0195890:CDS |
| AGAAATTTATGCAACTACAG+TGG | 0.642318 | 2_1:-12856163 | Msa0195890:CDS |
| TAATTATGGAGAGATTGCCA+AGG | 0.649099 | 2_1:-12857418 | Msa0195890:CDS |
| GTTGAATTGGACAGACCACA+AGG | 0.649599 | 2_1:-12856986 | Msa0195890:CDS |
| AGTGGCAGCACCAAGCCACA+TGG | 0.653883 | 2_1:-12857773 | Msa0195890:CDS |
| GTGATCGCTTTGTATCAACA+TGG | 0.654520 | 2_1:+12855326 | None:intergenic |
| AATTATGGAGAGATTGCCAA+GGG | 0.672398 | 2_1:-12857417 | Msa0195890:CDS |
| TCTTAGAAAAGAGATTTCTG+AGG | 0.675088 | 2_1:-12856533 | Msa0195890:CDS |
| CTGATAGAAACCATCCCTAG+TGG | 0.693726 | 2_1:+12857237 | None:intergenic |
| GCGGCACTGACACGAATCAG+CGG | 0.697229 | 2_1:+12856196 | None:intergenic |
| AGGCTAATGTCATTGTACCG+AGG | 0.715726 | 2_1:-12857620 | Msa0195890:CDS |
| TGACTCAGTAATAGACCATG+TGG | 0.721103 | 2_1:+12857758 | None:intergenic |
| TAAAGAAGCTGGAATCACTG+AGG | 0.725394 | 2_1:-12855651 | Msa0195890:CDS |
| AGTGTGAGTTAGGACCACTA+GGG | 0.737164 | 2_1:-12857251 | Msa0195890:CDS |
| ACACAGAAAAGACACCGTGG+AGG | 0.742824 | 2_1:-12857640 | Msa0195890:CDS |
| ATTCTGTTATCCGAAAACCT+CGG | 0.760838 | 2_1:+12857603 | None:intergenic |
| GAAACACAGAAAAGACACCG+TGG | 0.780135 | 2_1:-12857643 | Msa0195890:CDS |
| GAATTGGACAGACCACAAGG+AGG | 0.789179 | 2_1:-12856983 | Msa0195890:CDS |
| AGACTGCTAAGGCCACGACG+CGG | 0.829004 | 2_1:+12858068 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAACATAAGTAATTTTA+AGG | - | chr2_1:12857887-12857906 | Msa0195890:CDS | 15.0% |
| !! | GTATTTATAAATAGAAACTA+AGG | + | chr2_1:12858224-12858243 | None:intergenic | 15.0% |
| !! | CATATATAATATCATCATCA+TGG | - | chr2_1:12855199-12855218 | Msa0195890:three_prime_UTR | 20.0% |
| !!! | ATTCTTTATACTTTGAAGAA+TGG | + | chr2_1:12855705-12855724 | None:intergenic | 20.0% |
| !! | TAAATTTCTTAGAATTCTAG+CGG | + | chr2_1:12857223-12857242 | None:intergenic | 20.0% |
| !!! | AGATGATATTTTTTAACCAT+CGG | + | chr2_1:12857596-12857615 | None:intergenic | 20.0% |
| !!! | TAATTTTAAGGATCTTCAAA+TGG | - | chr2_1:12857899-12857918 | Msa0195890:CDS | 20.0% |
| ! | AAACTCAATGTAAATGTTTG+TGG | + | chr2_1:12855172-12855191 | None:intergenic | 25.0% |
| ! | GATCATAAAATTTGTGTAGA+TGG | - | chr2_1:12855221-12855240 | Msa0195890:three_prime_UTR | 25.0% |
| !! | ACAATCATACTATTGATTGA+AGG | - | chr2_1:12855569-12855588 | Msa0195890:CDS | 25.0% |
| !! | CAATCATACTATTGATTGAA+GGG | - | chr2_1:12855570-12855589 | Msa0195890:CDS | 25.0% |
| ! | ATGAAAAACCATTTAGCATA+TGG | + | chr2_1:12855869-12855888 | None:intergenic | 25.0% |
| !! | CTAAATGGTTTTTCATTTCA+AGG | - | chr2_1:12855873-12855892 | Msa0195890:intron | 25.0% |
| !! | TCTCAACATATTTTATGCAT+TGG | - | chr2_1:12856033-12856052 | Msa0195890:intron | 25.0% |
| !!! | TATCTTTGATGGATTGAAAA+TGG | - | chr2_1:12856225-12856244 | Msa0195890:CDS | 25.0% |
| ! | GATTGGAATTTCTATATCTT+TGG | - | chr2_1:12856369-12856388 | Msa0195890:CDS | 25.0% |
| ! | ATATTTGATCATCCGAATTA+CGG | - | chr2_1:12856604-12856623 | Msa0195890:CDS | 25.0% |
| !!! | ATCAGAGATATTTTAAGACA+TGG | - | chr2_1:12856907-12856926 | Msa0195890:CDS | 25.0% |
| !!! | AATTTTAACAAGTCTTGCAT+TGG | - | chr2_1:12856966-12856985 | Msa0195890:CDS | 25.0% |
| ! | TTGAAAATAACACTTACTGT+TGG | + | chr2_1:12857303-12857322 | None:intergenic | 25.0% |
| ! | GTATGAAAACTATCTGAAAA+TGG | - | chr2_1:12857440-12857459 | Msa0195890:CDS | 25.0% |
| ! | ATTTGAATTGAGCTTATCTA+TGG | + | chr2_1:12857536-12857555 | None:intergenic | 25.0% |
| ! | CTAAATAGAATAGAAACGTA+GGG | + | chr2_1:12857562-12857581 | None:intergenic | 25.0% |
| ! | ACTAAATAGAATAGAAACGT+AGG | + | chr2_1:12857563-12857582 | None:intergenic | 25.0% |
| !!! | TAGAATCTGGACTAATTTTT+TGG | + | chr2_1:12857781-12857800 | None:intergenic | 25.0% |
| !!! | ATTGATGTTTCTTTAGAATC+TGG | + | chr2_1:12857794-12857813 | None:intergenic | 25.0% |
| ! | AATGAATAAATTACTGAGTC+AGG | + | chr2_1:12858156-12858175 | None:intergenic | 25.0% |
| AAAATTTGTGTAGATGGAGA+AGG | - | chr2_1:12855227-12855246 | Msa0195890:three_prime_UTR | 30.0% | |
| ! | GTCTTTTCTGTGTTTCTTAA+CGG | + | chr2_1:12855750-12855769 | None:intergenic | 30.0% |
| TTTCGGATAACAGAATTACA+AGG | - | chr2_1:12855801-12855820 | Msa0195890:intron | 30.0% | |
| CATTTAGCATATGGTAAAAG+TGG | + | chr2_1:12855860-12855879 | None:intergenic | 30.0% | |
| ! | CACTTTTACCATATGCTAAA+TGG | - | chr2_1:12855858-12855877 | Msa0195890:intron | 30.0% |
| ATATTAGCAAGGTTCTCTAT+TGG | - | chr2_1:12855897-12855916 | Msa0195890:intron | 30.0% | |
| !! | TTTGTTGTTCTTAACAGAGA+AGG | - | chr2_1:12856069-12856088 | Msa0195890:intron | 30.0% |
| TCTTAACAGAGAAGGTTTAT+TGG | - | chr2_1:12856077-12856096 | Msa0195890:intron | 30.0% | |
| CTTAACAGAGAAGGTTTATT+GGG | - | chr2_1:12856078-12856097 | Msa0195890:intron | 30.0% | |
| ATTAAGCTACTGTGAACTAT+TGG | - | chr2_1:12856108-12856127 | Msa0195890:intron | 30.0% | |
| ! | TCTTTTATGATGCTTATTCG+AGG | - | chr2_1:12856188-12856207 | Msa0195890:CDS | 30.0% |
| !! | TGATGGATTGAAAATGGATA+TGG | - | chr2_1:12856231-12856250 | Msa0195890:CDS | 30.0% |
| TGGAATTTCTATATCTTTGG+TGG | - | chr2_1:12856372-12856391 | Msa0195890:CDS | 30.0% | |
| ! | GAGATTTTATCAAAACTAGC+AGG | - | chr2_1:12856460-12856479 | Msa0195890:CDS | 30.0% |
| TATTTGATCATCCGAATTAC+GGG | - | chr2_1:12856605-12856624 | Msa0195890:CDS | 30.0% | |
| TTCTGGACATTTAACCATTT+GGG | - | chr2_1:12856628-12856647 | Msa0195890:CDS | 30.0% | |
| ! | TAACATTTTCATTCTTCAGC+AGG | + | chr2_1:12856762-12856781 | None:intergenic | 30.0% |
| TTCACTGTTTGAATTTGTGA+GGG | + | chr2_1:12856787-12856806 | None:intergenic | 30.0% | |
| TCTTAGAAAAGAGATTTCTG+AGG | - | chr2_1:12856864-12856883 | Msa0195890:CDS | 30.0% | |
| AGAAATTTATGCAACTACAG+TGG | - | chr2_1:12857234-12857253 | Msa0195890:CDS | 30.0% | |
| ! | TTTTCACAGGCTCTATAAAA+CGG | - | chr2_1:12857492-12857511 | Msa0195890:CDS | 30.0% |
| TTTAGTAAAATGTCTACCGA+TGG | - | chr2_1:12857577-12857596 | Msa0195890:CDS | 30.0% | |
| GAATAAACTACAAGAAGTGA+TGG | - | chr2_1:12857665-12857684 | Msa0195890:CDS | 30.0% | |
| ATATGTGTGTGAAACTTTCA+GGG | - | chr2_1:12858118-12858137 | Msa0195890:CDS | 30.0% | |
| !! | ATCTAGAAGTTGGTGAACTT+AGG | - | chr2_1:12855264-12855283 | Msa0195890:three_prime_UTR | 35.0% |
| ! | AAGAGGGTAAGTTTCTTTTC+CGG | + | chr2_1:12855422-12855441 | None:intergenic | 35.0% |
| !!! | TGGGAACTCTTGGTTTTATA+TGG | - | chr2_1:12855483-12855502 | Msa0195890:CDS | 35.0% |
| !!! | GGGAACTCTTGGTTTTATAT+GGG | - | chr2_1:12855484-12855503 | Msa0195890:CDS | 35.0% |
| !! | GTCTGTTTTGTCTAAGGTAA+TGG | + | chr2_1:12855537-12855556 | None:intergenic | 35.0% |
| ! | CCAAAAGTCTGTTTTGTCTA+AGG | + | chr2_1:12855543-12855562 | None:intergenic | 35.0% |
| ! | CCTTAGACAAAACAGACTTT+TGG | - | chr2_1:12855540-12855559 | Msa0195890:CDS | 35.0% |
| ! | AGTCAGGAATGCATAGTTTT+CGG | - | chr2_1:12855657-12855676 | Msa0195890:CDS | 35.0% |
| ! | TTTTCTGTGTTTCTTAACGG+CGG | + | chr2_1:12855747-12855766 | None:intergenic | 35.0% |
| ATTCTGTTATCCGAAAACCT+CGG | + | chr2_1:12855797-12855816 | None:intergenic | 35.0% | |
| CATTTCAAGGCATATTAGCA+AGG | - | chr2_1:12855886-12855905 | Msa0195890:intron | 35.0% | |
| AAGCTCATCAGGCATAATTA+TGG | - | chr2_1:12855965-12855984 | Msa0195890:intron | 35.0% | |
| TAATTATGGAGAGATTGCCA+AGG | - | chr2_1:12855979-12855998 | Msa0195890:intron | 35.0% | |
| AATTATGGAGAGATTGCCAA+GGG | - | chr2_1:12855980-12855999 | Msa0195890:intron | 35.0% | |
| ATATGTTGAGAGCAGATTCA+CGG | + | chr2_1:12856024-12856043 | None:intergenic | 35.0% | |
| ! | GTTAACAAAGAGTGTGAGTT+AGG | - | chr2_1:12856136-12856155 | Msa0195890:CDS | 35.0% |
| !! | GTCAATGGAAGTATCTTTGA+TGG | - | chr2_1:12856214-12856233 | Msa0195890:CDS | 35.0% |
| !! | GTCTTTTGCTATGGATCTTT+TGG | - | chr2_1:12856255-12856274 | Msa0195890:CDS | 35.0% |
| GACGATACACTTCAAAAGAT+TGG | - | chr2_1:12856352-12856371 | Msa0195890:CDS | 35.0% | |
| ! | GACTAGTTGAGATGTTGAAT+TGG | - | chr2_1:12856398-12856417 | Msa0195890:CDS | 35.0% |
| ! | GTTCTGGACATTTAACCATT+TGG | - | chr2_1:12856627-12856646 | Msa0195890:CDS | 35.0% |
| GGAAAGATTGGAAATACAAG+AGG | - | chr2_1:12856694-12856713 | Msa0195890:CDS | 35.0% | |
| ! | AATCTACGATCTTTGGAAGT+AGG | + | chr2_1:12856720-12856739 | None:intergenic | 35.0% |
| TGTGTGAAATCTACGATCTT+TGG | + | chr2_1:12856727-12856746 | None:intergenic | 35.0% | |
| CTTCACTGTTTGAATTTGTG+AGG | + | chr2_1:12856788-12856807 | None:intergenic | 35.0% | |
| ATGCTCAGTTTCTGTAACAA+GGG | + | chr2_1:12856943-12856962 | None:intergenic | 35.0% | |
| TATGCTCAGTTTCTGTAACA+AGG | + | chr2_1:12856944-12856963 | None:intergenic | 35.0% | |
| !!! | GTTACATCTTTCTGGTTTTC+AGG | + | chr2_1:12857072-12857091 | None:intergenic | 35.0% |
| CAACAGTTGTTACATCTTTC+TGG | + | chr2_1:12857080-12857099 | None:intergenic | 35.0% | |
| AAAGATGTAACAACTGTTGC+TGG | - | chr2_1:12857081-12857100 | Msa0195890:CDS | 35.0% | |
| !! | TTCTAATGCCAGCATTGATA+AGG | + | chr2_1:12857112-12857131 | None:intergenic | 35.0% |
| AGAATGCTTCAACCAGTTAA+AGG | - | chr2_1:12857260-12857279 | Msa0195890:CDS | 35.0% | |
| GAATGCTTCAACCAGTTAAA+GGG | - | chr2_1:12857261-12857280 | Msa0195890:CDS | 35.0% | |
| CTTTACAAATCTCACATGCT+TGG | + | chr2_1:12857366-12857385 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATAAGCTATCT+AGG | - | chr2_1:12857412-12857431 | Msa0195890:CDS | 35.0% |
| AACTATCTGAAAATGGCCTA+TGG | - | chr2_1:12857447-12857466 | Msa0195890:CDS | 35.0% | |
| AGAGCTTCAAAAATGTCCAT+AGG | + | chr2_1:12857466-12857485 | None:intergenic | 35.0% | |
| ! | AAGCTCTTCACAATTTTCAC+AGG | - | chr2_1:12857479-12857498 | Msa0195890:CDS | 35.0% |
| AAACTACAAGAAGTGATGGT+TGG | - | chr2_1:12857669-12857688 | Msa0195890:CDS | 35.0% | |
| AGAACTGTGTTTAAAGAAGC+TGG | - | chr2_1:12857735-12857754 | Msa0195890:CDS | 35.0% | |
| ACATCAATATCCAGCAACAA+AGG | - | chr2_1:12857806-12857825 | Msa0195890:CDS | 35.0% | |
| ATCACAAATCTCCTTATCCT+AGG | + | chr2_1:12857834-12857853 | None:intergenic | 35.0% | |
| TAAGGATCTTCAAATGGAAG+AGG | - | chr2_1:12857905-12857924 | Msa0195890:CDS | 35.0% | |
| !! | GAAAGCTTTAACGTTTTCTC+TGG | - | chr2_1:12857963-12857982 | Msa0195890:CDS | 35.0% |
| CATATGTGTGTGAAACTTTC+AGG | - | chr2_1:12858117-12858136 | Msa0195890:CDS | 35.0% | |
| !! | GGAAGCATTCATCTAGAAGT+TGG | - | chr2_1:12855254-12855273 | Msa0195890:three_prime_UTR | 40.0% |
| !! | TAGAAGTTGGTGAACTTAGG+AGG | - | chr2_1:12855267-12855286 | Msa0195890:three_prime_UTR | 40.0% |
| AGTCTAGAGAAGAGAGATAG+TGG | - | chr2_1:12855347-12855366 | Msa0195890:exon | 40.0% | |
| TTCAACAACAGTTAGAGCAC+CGG | - | chr2_1:12855400-12855419 | Msa0195890:CDS | 40.0% | |
| !!! | AGTTGCTGCTTTTTCAAGCA+CGG | + | chr2_1:12855459-12855478 | None:intergenic | 40.0% |
| TGAAAAAGCAGCAACTGGTT+TGG | - | chr2_1:12855463-12855482 | Msa0195890:CDS | 40.0% | |
| ! | GAAAAAGCAGCAACTGGTTT+GGG | - | chr2_1:12855464-12855483 | Msa0195890:CDS | 40.0% |
| TGACTCAGTAATAGACCATG+TGG | + | chr2_1:12855642-12855661 | None:intergenic | 40.0% | |
| ACATGGTCTATTACTGAGTC+AGG | - | chr2_1:12855641-12855660 | Msa0195890:CDS | 40.0% | |
| TTCTTAACGGCGGCATTAAT+AGG | + | chr2_1:12855737-12855756 | None:intergenic | 40.0% | |
| ! | TACAATGACATTAGCCTCCA+CGG | + | chr2_1:12855774-12855793 | None:intergenic | 40.0% |
| ! | TGTCATTGTACCGAGGTTTT+CGG | - | chr2_1:12855784-12855803 | Msa0195890:intron | 40.0% |
| GAATTACAAGGACAACGACT+AGG | - | chr2_1:12855813-12855832 | Msa0195890:intron | 40.0% | |
| AGATTCACGGTTCCTCTTAT+CGG | + | chr2_1:12856011-12856030 | None:intergenic | 40.0% | |
| CTACTGTGAACTATTGGATG+AGG | - | chr2_1:12856114-12856133 | Msa0195890:CDS | 40.0% | |
| ! | GGATATGGTGTCTTTTGCTA+TGG | - | chr2_1:12856246-12856265 | Msa0195890:CDS | 40.0% |
| ACCACAAGGAGGAAGAAATT+AGG | - | chr2_1:12856425-12856444 | Msa0195890:CDS | 40.0% | |
| !! | GATATTGATTCCATAGCTCC+CGG | + | chr2_1:12856520-12856539 | None:intergenic | 40.0% |
| CGTCTCTTCTACAAACTAAC+AGG | - | chr2_1:12856539-12856558 | Msa0195890:CDS | 40.0% | |
| AATGTCCAGAACCCGTAATT+CGG | + | chr2_1:12856619-12856638 | None:intergenic | 40.0% | |
| TCAGAATGAGTAGTCCCAAA+TGG | + | chr2_1:12856645-12856664 | None:intergenic | 40.0% | |
| CACGACAATTGTGGAAAGAT+TGG | - | chr2_1:12856682-12856701 | Msa0195890:CDS | 40.0% | |
| ATTCTTCAGCAGGCTTTCTT+CGG | + | chr2_1:12856752-12856771 | None:intergenic | 40.0% | |
| ! | AAAATGCTGGCTAGTACAAC+AGG | - | chr2_1:12856826-12856845 | Msa0195890:CDS | 40.0% |
| GCTAGTACAACAGGAACATA+TGG | - | chr2_1:12856835-12856854 | Msa0195890:CDS | 40.0% | |
| TGCTCAGTTTCTGTAACAAG+GGG | + | chr2_1:12856942-12856961 | None:intergenic | 40.0% | |
| TGGAAGATGAAGCAACAGAA+AGG | - | chr2_1:12856986-12857005 | Msa0195890:CDS | 40.0% | |
| GATGAAGCAACAGAAAGGAT+TGG | - | chr2_1:12856991-12857010 | Msa0195890:CDS | 40.0% | |
| AAAGCAAGAGCAACTGTCAT+CGG | - | chr2_1:12857130-12857149 | Msa0195890:CDS | 40.0% | |
| TAAAGAAGCTGGAATCACTG+AGG | - | chr2_1:12857746-12857765 | Msa0195890:CDS | 40.0% | |
| CAACAAAGGTTCCTAGGATA+AGG | - | chr2_1:12857820-12857839 | Msa0195890:CDS | 40.0% | |
| AAGGAGATTTGTGATTGAGC+TGG | - | chr2_1:12857839-12857858 | Msa0195890:CDS | 40.0% | |
| ! | TCTTCAAATGGAAGAGGTGT+TGG | - | chr2_1:12857911-12857930 | Msa0195890:CDS | 40.0% |
| ! | AAAGCTTTCAAGCTCTGATG+TGG | + | chr2_1:12857952-12857971 | None:intergenic | 40.0% |
| ! | AACGTTTTCTCTGGTACTGT+CGG | - | chr2_1:12857972-12857991 | Msa0195890:CDS | 40.0% |
| CAGTCTAACAATTCACTCAC+TGG | - | chr2_1:12858007-12858026 | Msa0195890:CDS | 40.0% | |
| GTGATCGCTTTGTATCAACA+TGG | + | chr2_1:12858074-12858093 | None:intergenic | 40.0% | |
| TTGTGTAGATGGAGAAGGAG+AGG | - | chr2_1:12855232-12855251 | Msa0195890:three_prime_UTR | 45.0% | |
| TGTGTAGATGGAGAAGGAGA+GGG | - | chr2_1:12855233-12855252 | Msa0195890:three_prime_UTR | 45.0% | |
| CTCTCTTCTCTAGACTGCTA+AGG | + | chr2_1:12855343-12855362 | None:intergenic | 45.0% | |
| GTGCTTGAAAAAGCAGCAAC+TGG | - | chr2_1:12855458-12855477 | Msa0195890:CDS | 45.0% | |
| CAGTAATAGACCATGTGGCT+TGG | + | chr2_1:12855637-12855656 | None:intergenic | 45.0% | |
| GAAACACAGAAAAGACACCG+TGG | - | chr2_1:12855754-12855773 | Msa0195890:CDS | 45.0% | |
| AGGCTAATGTCATTGTACCG+AGG | - | chr2_1:12855777-12855796 | Msa0195890:intron | 45.0% | |
| TGTCTTCGACAAAGCTCATC+AGG | - | chr2_1:12855954-12855973 | Msa0195890:intron | 45.0% | |
| CAGAGAAGGTTTATTGGGAG+TGG | - | chr2_1:12856083-12856102 | Msa0195890:intron | 45.0% | |
| AGTGTGAGTTAGGACCACTA+GGG | - | chr2_1:12856146-12856165 | Msa0195890:CDS | 45.0% | |
| CTGATAGAAACCATCCCTAG+TGG | + | chr2_1:12856163-12856182 | None:intergenic | 45.0% | |
| CACTAGGGATGGTTTCTATC+AGG | - | chr2_1:12856161-12856180 | Msa0195890:CDS | 45.0% | |
| GCTTATTCGAGGTGTGTCAA+TGG | - | chr2_1:12856199-12856218 | Msa0195890:CDS | 45.0% | |
| CTTCTCATCAGGTGAGTTTG+AGG | + | chr2_1:12856281-12856300 | None:intergenic | 45.0% | |
| TCACCTGATGAGAAGCTCAT+TGG | - | chr2_1:12856286-12856305 | Msa0195890:CDS | 45.0% | |
| GACAATTTGCCAACAGTGAG+AGG | - | chr2_1:12856323-12856342 | Msa0195890:CDS | 45.0% | |
| ! | TGCCAACAGTGAGAGGTTTT+CGG | - | chr2_1:12856330-12856349 | Msa0195890:CDS | 45.0% |
| GTTGAATTGGACAGACCACA+AGG | - | chr2_1:12856411-12856430 | Msa0195890:CDS | 45.0% | |
| GCCTAATTTCTTCCTCCTTG+TGG | + | chr2_1:12856429-12856448 | None:intergenic | 45.0% | |
| AGAAATTAGGCTGTCTGCTG+CGG | - | chr2_1:12856438-12856457 | Msa0195890:CDS | 45.0% | |
| ATCATCCGAATTACGGGTTC+TGG | - | chr2_1:12856611-12856630 | Msa0195890:CDS | 45.0% | |
| GAAGCAACAGAAAGGATTGG+AGG | - | chr2_1:12856994-12857013 | Msa0195890:CDS | 45.0% | |
| ! | ACAGAAAGGATTGGAGGTAC+AGG | - | chr2_1:12857000-12857019 | Msa0195890:CDS | 45.0% |
| TGTAACAACTGTTGCTGGTG+AGG | - | chr2_1:12857086-12857105 | Msa0195890:CDS | 45.0% | |
| !! | TGAAGTTGAGAGTGCTCGAA+AGG | - | chr2_1:12857157-12857176 | Msa0195890:CDS | 45.0% |
| CTGCTGTAACTCCCTTTAAC+TGG | + | chr2_1:12857275-12857294 | None:intergenic | 45.0% | |
| TGGAATCACTGAGGTTGAAC+TGG | - | chr2_1:12857755-12857774 | Msa0195890:CDS | 45.0% | |
| ATCCAGCAACAAAGGTTCCT+AGG | - | chr2_1:12857814-12857833 | Msa0195890:CDS | 45.0% | |
| ATCCTAGGAACCTTTGTTGC+TGG | + | chr2_1:12857819-12857838 | None:intergenic | 45.0% | |
| TTGTGATTGAGCTGGCTATC+TGG | - | chr2_1:12857847-12857866 | Msa0195890:CDS | 45.0% | |
| !! | TCAAATGGAAGAGGTGTTGG+AGG | - | chr2_1:12857914-12857933 | Msa0195890:CDS | 45.0% |
| !! | CAAATGGAAGAGGTGTTGGA+GGG | - | chr2_1:12857915-12857934 | Msa0195890:CDS | 45.0% |
| !! | TGAGACAGCATTGATGTTGC+TGG | - | chr2_1:12858031-12858050 | Msa0195890:CDS | 45.0% |
| !!! | CTGCTTTTTCAAGCACGGCA+AGG | + | chr2_1:12855454-12855473 | None:intergenic | 50.0% |
| !! | GCAACTGGTTTGGGAACTCT+TGG | - | chr2_1:12855473-12855492 | Msa0195890:CDS | 50.0% |
| TGGGCAACTGTTGTCCTTCT+CGG | - | chr2_1:12855503-12855522 | Msa0195890:CDS | 50.0% | |
| TAATGGCGAAACCACCGAGA+AGG | + | chr2_1:12855520-12855539 | None:intergenic | 50.0% | |
| ! | AAGGGACGCGAATTTTCAGC+AGG | - | chr2_1:12855588-12855607 | Msa0195890:CDS | 50.0% |
| ACACAGAAAAGACACCGTGG+AGG | - | chr2_1:12855757-12855776 | Msa0195890:CDS | 50.0% | |
| TCTTTCTGCAACAGCTTGCG+TGG | - | chr2_1:12855928-12855947 | Msa0195890:intron | 50.0% | |
| CCTCTTATCGGTATCTCCCT+TGG | + | chr2_1:12855999-12856018 | None:intergenic | 50.0% | |
| CCAAGGGAGATACCGATAAG+AGG | - | chr2_1:12855996-12856015 | Msa0195890:intron | 50.0% | |
| GAGTGTGAGTTAGGACCACT+AGG | - | chr2_1:12856145-12856164 | Msa0195890:CDS | 50.0% | |
| TGAGTTAGGACCACTAGGGA+TGG | - | chr2_1:12856150-12856169 | Msa0195890:CDS | 50.0% | |
| GCTCCAATGAGCTTCTCATC+AGG | + | chr2_1:12856292-12856311 | None:intergenic | 50.0% | |
| GTCCGAAAACCTCTCACTGT+TGG | + | chr2_1:12856335-12856354 | None:intergenic | 50.0% | |
| GAATTGGACAGACCACAAGG+AGG | - | chr2_1:12856414-12856433 | Msa0195890:CDS | 50.0% | |
| CAGAACTCTCTACGCATAGC+CGG | - | chr2_1:12856490-12856509 | Msa0195890:CDS | 50.0% | |
| AGAACTCTCTACGCATAGCC+GGG | - | chr2_1:12856491-12856510 | Msa0195890:CDS | 50.0% | |
| GCACACGATCACGACAATTG+TGG | - | chr2_1:12856673-12856692 | Msa0195890:CDS | 50.0% | |
| ! | CAGCATTTTCACCAGCTGCA+GGG | + | chr2_1:12856815-12856834 | None:intergenic | 50.0% |
| ! | GAAAGGATTGGAGGTACAGG+TGG | - | chr2_1:12857003-12857022 | Msa0195890:CDS | 50.0% |
| ! | TGGTGAGGCCTTATCAATGC+TGG | - | chr2_1:12857101-12857120 | Msa0195890:CDS | 50.0% |
| GTACCTGCAAGGTTGAGGAA+GGG | + | chr2_1:12857623-12857642 | None:intergenic | 50.0% | |
| AGTACCTGCAAGGTTGAGGA+AGG | + | chr2_1:12857624-12857643 | None:intergenic | 50.0% | |
| ! | CTGAAGTACCTGCAAGGTTG+AGG | + | chr2_1:12857628-12857647 | None:intergenic | 50.0% |
| CTCAACCTTGCAGGTACTTC+AGG | - | chr2_1:12857626-12857645 | Msa0195890:CDS | 50.0% | |
| ! | GATTGCCTGAAGTACCTGCA+AGG | + | chr2_1:12857634-12857653 | None:intergenic | 50.0% |
| CTGGTACTGTCGGTCTGAAT+CGG | - | chr2_1:12857982-12858001 | Msa0195890:CDS | 50.0% | |
| ACGACGCGGCTCAAACATTG+TGG | + | chr2_1:12855318-12855337 | None:intergenic | 55.0% | |
| ACAATGTTTGAGCCGCGTCG+TGG | - | chr2_1:12855317-12855336 | Msa0195890:three_prime_UTR | 55.0% | |
| GCAACTGTTGTCCTTCTCGG+TGG | - | chr2_1:12855506-12855525 | Msa0195890:CDS | 55.0% | |
| GCAGGAGTCATGAGCTTGAG+TGG | - | chr2_1:12855606-12855625 | Msa0195890:CDS | 55.0% | |
| CAAGGACAACGACTAGGACG+TGG | - | chr2_1:12855819-12855838 | Msa0195890:intron | 55.0% | |
| TCTACGCATAGCCGGGATAC+CGG | - | chr2_1:12856498-12856517 | Msa0195890:CDS | 55.0% | |
| TTCCATAGCTCCCGGTATCC+CGG | + | chr2_1:12856512-12856531 | None:intergenic | 55.0% | |
| AGTGAAGAGATCCCTGCAGC+TGG | - | chr2_1:12856801-12856820 | Msa0195890:CDS | 55.0% | |
| ! | CCAGCATTTTCACCAGCTGC+AGG | + | chr2_1:12856816-12856835 | None:intergenic | 55.0% |
| CCTGCAGCTGGTGAAAATGC+TGG | - | chr2_1:12856813-12856832 | Msa0195890:CDS | 55.0% | |
| TGACCCTTCCTCAACCTTGC+AGG | - | chr2_1:12857617-12857636 | Msa0195890:CDS | 55.0% | |
| AGACTGCTAAGGCCACGACG+CGG | + | chr2_1:12855332-12855351 | None:intergenic | 60.0% | |
| GGCAAGGCGCAGAGCAAAGA+GGG | + | chr2_1:12855438-12855457 | None:intergenic | 60.0% | |
| AGTGGCAGCACCAAGCCACA+TGG | - | chr2_1:12855624-12855643 | Msa0195890:CDS | 60.0% | |
| CTACGCATAGCCGGGATACC+GGG | - | chr2_1:12856499-12856518 | Msa0195890:CDS | 60.0% | |
| !! | GCGGCACTGACACGAATCAG+CGG | + | chr2_1:12857204-12857223 | None:intergenic | 60.0% |
| CGGCAAGGCGCAGAGCAAAG+AGG | + | chr2_1:12855439-12855458 | None:intergenic | 65.0% | |
| AGCCGGGATACCGGGAGCTA+TGG | - | chr2_1:12856507-12856526 | Msa0195890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 12855144 | 12858275 | 12855144 | ID=Msa0195890;Name=Msa0195890 |
| chr2_1 | mRNA | 12855144 | 12858275 | 12855144 | ID=Msa0195890-mRNA-1;Parent=Msa0195890;Name=Msa0195890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=74|1|1|1|1|1|2|211|837 |
| chr2_1 | exon | 12855144 | 12855780 | 12855144 | ID=Msa0195890-mRNA-1:exon:5591;Parent=Msa0195890-mRNA-1 |
| chr2_1 | exon | 12856114 | 12858275 | 12856114 | ID=Msa0195890-mRNA-1:exon:5590;Parent=Msa0195890-mRNA-1 |
| chr2_1 | five_prime_UTR | 12858202 | 12858275 | 12858202 | ID=Msa0195890-mRNA-1:five_prime_utr;Parent=Msa0195890-mRNA-1 |
| chr2_1 | CDS | 12856114 | 12858201 | 12856114 | ID=Msa0195890-mRNA-1:cds;Parent=Msa0195890-mRNA-1 |
| chr2_1 | CDS | 12855355 | 12855780 | 12855355 | ID=Msa0195890-mRNA-1:cds;Parent=Msa0195890-mRNA-1 |
| chr2_1 | three_prime_UTR | 12855144 | 12855354 | 12855144 | ID=Msa0195890-mRNA-1:three_prime_utr;Parent=Msa0195890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
