Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241080 | XP_003594526.1 | 99.206 | 378 | 3 | 0 | 1 | 378 | 1 | 378 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241080 | sp|Q41014|FENR2_PEA | 92.857 | 378 | 26 | 1 | 1 | 378 | 1 | 377 | 0.0 | 742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241080 | G7IKU6 | 99.206 | 378 | 3 | 0 | 1 | 378 | 1 | 378 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0113920 | Msa0241080 | 0.841868 | 3.660572e-58 | -8.615850e-47 |
| Msa0241080 | Msa0267230 | 0.801957 | 7.047055e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241080 | MtrunA17_Chr2g0292421 | 99.206 | 378 | 3 | 0 | 1 | 378 | 1 | 378 | 0.0 | 788 |
| Msa0241080 | MtrunA17_Chr5g0405571 | 43.979 | 382 | 183 | 7 | 5 | 378 | 3 | 361 | 4.24e-95 | 288 |
| Msa0241080 | MtrunA17_Chr4g0072351 | 29.947 | 187 | 117 | 7 | 193 | 372 | 512 | 691 | 1.04e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241080 | AT4G05390.1 | 80.800 | 375 | 69 | 3 | 5 | 378 | 6 | 378 | 0.0 | 640 |
| Msa0241080 | AT1G30510.1 | 81.102 | 381 | 69 | 2 | 1 | 378 | 1 | 381 | 0.0 | 636 |
| Msa0241080 | AT1G30510.2 | 81.152 | 382 | 68 | 3 | 1 | 378 | 1 | 382 | 0.0 | 634 |
| Msa0241080 | AT1G30510.3 | 88.959 | 317 | 35 | 0 | 62 | 378 | 1 | 317 | 0.0 | 602 |
| Msa0241080 | AT4G05390.2 | 76.533 | 375 | 57 | 3 | 5 | 378 | 6 | 350 | 0.0 | 593 |
| Msa0241080 | AT1G20020.3 | 49.196 | 311 | 150 | 4 | 69 | 378 | 66 | 369 | 3.58e-99 | 299 |
| Msa0241080 | AT1G20020.1 | 49.196 | 311 | 150 | 4 | 69 | 378 | 66 | 369 | 3.87e-99 | 299 |
| Msa0241080 | AT5G66190.1 | 53.242 | 293 | 129 | 4 | 87 | 378 | 75 | 360 | 6.83e-98 | 295 |
| Msa0241080 | AT1G20020.2 | 51.908 | 262 | 118 | 4 | 118 | 378 | 1 | 255 | 6.34e-89 | 269 |
| Msa0241080 | AT5G66190.2 | 54.724 | 254 | 107 | 4 | 126 | 378 | 16 | 262 | 2.46e-85 | 260 |
| Msa0241080 | AT4G30210.3 | 28.696 | 230 | 137 | 12 | 153 | 372 | 552 | 764 | 6.12e-11 | 64.7 |
| Msa0241080 | AT4G30210.2 | 28.696 | 230 | 137 | 12 | 153 | 372 | 489 | 701 | 7.24e-11 | 64.3 |
| Msa0241080 | AT4G30210.1 | 28.696 | 230 | 137 | 12 | 153 | 372 | 490 | 702 | 7.38e-11 | 64.3 |
Find 126 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCAGAAGATCTGTGTTTA+AGG | 0.082604 | 2_2:+16524990 | Msa0241080:CDS |
| TGGATAATCCTTAAGGTATT+TGG | 0.160319 | 2_2:-16527410 | None:intergenic |
| GGATCTTCCTTTCCTGTTTC+GGG | 0.187287 | 2_2:-16526469 | None:intergenic |
| AATTATCTTGTTAAACAATA+AGG | 0.223316 | 2_2:+16527930 | Msa0241080:three_prime_UTR |
| AGGATCTTCCTTTCCTGTTT+CGG | 0.245335 | 2_2:-16526470 | None:intergenic |
| TACCAGTAGCAATCATTATA+TGG | 0.248484 | 2_2:-16527252 | None:intergenic |
| GGCATCTAACATAAACTTTC+GGG | 0.262545 | 2_2:+16525808 | Msa0241080:intron |
| GGAAACAATTGTTGCTGTAT+AGG | 0.274117 | 2_2:-16526011 | None:intergenic |
| TGTTCTTCCCTTTGGCTTCT+CGG | 0.276066 | 2_2:-16524460 | None:intergenic |
| ATCATTATATGGGTAGCATT+TGG | 0.280206 | 2_2:-16527241 | None:intergenic |
| GTCTCACTTGTCAGCTTCTA+AGG | 0.293435 | 2_2:+16524634 | Msa0241080:CDS |
| TGCTGTCTCCCCTTTAGAAT+TGG | 0.295412 | 2_2:+16525943 | Msa0241080:CDS |
| GTTGCTGTATAGGGTTCTTT+AGG | 0.297996 | 2_2:-16526001 | None:intergenic |
| ATCTTTAAGCTCTTGGATAA+TGG | 0.299509 | 2_2:+16527532 | Msa0241080:CDS |
| ATTGCTACAGACACCATTCT+TGG | 0.300078 | 2_2:-16526494 | None:intergenic |
| CGGGTTCTTGTTCTTCCCTT+TGG | 0.314253 | 2_2:-16524468 | None:intergenic |
| CGATGAAATCTTTAAGCTCT+TGG | 0.328554 | 2_2:+16527525 | Msa0241080:CDS |
| GAAACAATTGTTGCTGTATA+GGG | 0.331471 | 2_2:-16526010 | None:intergenic |
| CGACGAAGATAGCCTCTATA+TGG | 0.346154 | 2_2:-16527286 | None:intergenic |
| GTTTATTATGATCCCGAAAC+AGG | 0.351992 | 2_2:+16526457 | Msa0241080:CDS |
| CAAGTTTCCCCAGGAGCCTT+TGG | 0.352435 | 2_2:-16526052 | None:intergenic |
| CGGTCGTACCGGAAGTTCTC+TGG | 0.357124 | 2_2:-16527430 | None:intergenic |
| CAAGTACATAATCAGACTAT+TGG | 0.373699 | 2_2:+16524404 | None:intergenic |
| TGTTTCCGTTGAACGAATAG+TGG | 0.377041 | 2_2:+16526027 | Msa0241080:CDS |
| AGGCATCTAACATAAACTTT+CGG | 0.378017 | 2_2:+16525807 | Msa0241080:intron |
| AACCTTAAACACAGATCTTC+TGG | 0.380352 | 2_2:-16524992 | None:intergenic |
| ATGGGCACCGGTGTTTGCTT+TGG | 0.380687 | 2_2:+16525838 | Msa0241080:CDS |
| TCATTATATGGGTAGCATTT+GGG | 0.382897 | 2_2:-16527240 | None:intergenic |
| TAAAGGGGAGACAGCAACTT+TGG | 0.385969 | 2_2:-16525936 | None:intergenic |
| CTATCTTCGTCGAATGTTCA+TGG | 0.396101 | 2_2:+16527297 | Msa0241080:CDS |
| TTCAGTGTTTCTTGGATCCC+AGG | 0.401187 | 2_2:-16527592 | None:intergenic |
| AGGATTATCCAGAGAACTTC+CGG | 0.402547 | 2_2:+16527422 | Msa0241080:CDS |
| TCTCCTCTCTGCTGAGGGCT+CGG | 0.410365 | 2_2:-16527450 | None:intergenic |
| GCAGTGCTAGAGACATGTTT+GGG | 0.410616 | 2_2:+16527883 | Msa0241080:three_prime_UTR |
| TAAACTTTCGGGATAAATCA+TGG | 0.423327 | 2_2:+16525819 | Msa0241080:CDS |
| TCAGCAGAGAGGAGAAGAAC+AGG | 0.425608 | 2_2:+16527458 | Msa0241080:CDS |
| AGCAGTGCTAGAGACATGTT+TGG | 0.441077 | 2_2:+16527882 | Msa0241080:three_prime_UTR |
| AAAGGGGAGACAGCAACTTT+GGG | 0.448601 | 2_2:-16525935 | None:intergenic |
| TGAGAACAGAGGAGAAAGTT+GGG | 0.449040 | 2_2:+16527624 | Msa0241080:CDS |
| CATGATTGATAATGAGGAAG+AGG | 0.450727 | 2_2:-16524612 | None:intergenic |
| GCGGAGAAATCATTGCTAAC+AGG | 0.451084 | 2_2:-16524970 | None:intergenic |
| TCAATTGCTTCCACAAGGTA+TGG | 0.451671 | 2_2:+16526388 | Msa0241080:CDS |
| AGCACGGCGCACACACAAGC+TGG | 0.452246 | 2_2:-16526434 | None:intergenic |
| CTGAGAACAGAGGAGAAAGT+TGG | 0.454403 | 2_2:+16527623 | Msa0241080:CDS |
| TGCTGAGGGCTCGGTCGTAC+CGG | 0.456134 | 2_2:-16527441 | None:intergenic |
| ATGATGGAAATGTTCCCTAC+TGG | 0.456298 | 2_2:+16526092 | Msa0241080:CDS |
| GTAGCATTTGGGTCGTCCTC+TGG | 0.456451 | 2_2:-16527229 | None:intergenic |
| AGTTCTCTGGATAATCCTTA+AGG | 0.459417 | 2_2:-16527417 | None:intergenic |
| AGGTCATGCTCAAATTCTAC+TGG | 0.463291 | 2_2:-16527964 | None:intergenic |
| CGAGTTCACCAAATACCTTA+AGG | 0.464220 | 2_2:+16527402 | Msa0241080:CDS |
| TGGTGGCAAAATGTATGTTC+AGG | 0.466195 | 2_2:+16527483 | Msa0241080:CDS |
| ATAGTGGGACCAAAGGCTCC+TGG | 0.469565 | 2_2:+16526043 | Msa0241080:CDS |
| GGATCCAAGAAACACTGAAA+AGG | 0.471415 | 2_2:+16527596 | Msa0241080:CDS |
| ACCAGTAGCAATCATTATAT+GGG | 0.474656 | 2_2:-16527251 | None:intergenic |
| GGACTAGCATGGCTCTTCCT+TGG | 0.478480 | 2_2:+16527346 | Msa0241080:CDS |
| AGGTTCAACGGAGGCTCAGC+AGG | 0.478608 | 2_2:-16525971 | None:intergenic |
| ATCTATTTCTGTGGTCTGAA+AGG | 0.482804 | 2_2:+16527562 | Msa0241080:CDS |
| AGGGTTCTTTAGGCTTGTGT+AGG | 0.483001 | 2_2:-16525991 | None:intergenic |
| ACTGGTGTTGCTCCATATAG+AGG | 0.485627 | 2_2:+16527274 | Msa0241080:CDS |
| ATAATGATTGCTACTGGTAC+TGG | 0.485929 | 2_2:+16527256 | Msa0241080:CDS |
| GTTCTTCTCCTCTCTGCTGA+GGG | 0.489749 | 2_2:-16527455 | None:intergenic |
| GTGAGACATGATTGATAATG+AGG | 0.503169 | 2_2:-16524618 | None:intergenic |
| GGTCTGAAAGGAATGATGCC+TGG | 0.503754 | 2_2:+16527574 | Msa0241080:CDS |
| CGAACATTATGCGGAGCACC+CGG | 0.509700 | 2_2:-16526358 | None:intergenic |
| TACTGGGAGGGACAGAGTTA+TGG | 0.510183 | 2_2:+16526109 | Msa0241080:CDS |
| TGTTCTTCTCCTCTCTGCTG+AGG | 0.512076 | 2_2:-16527456 | None:intergenic |
| AAGGAAGATCCTTCCAAGAA+TGG | 0.517916 | 2_2:+16526481 | Msa0241080:CDS |
| TCAGTCCCTACATTCAAGTT+CGG | 0.518590 | 2_2:+16527322 | Msa0241080:CDS |
| GATCCAAGAAACACTGAAAA+GGG | 0.520133 | 2_2:+16527597 | Msa0241080:CDS |
| ATGAATGATCCTTTCGAGAG+AGG | 0.521646 | 2_2:-16524498 | None:intergenic |
| TAGTGGGACCAAAGGCTCCT+GGG | 0.524756 | 2_2:+16526044 | Msa0241080:CDS |
| ACCCATATAATGATTGCTAC+TGG | 0.525648 | 2_2:+16527250 | Msa0241080:CDS |
| TGAATGATCCTTTCGAGAGA+GGG | 0.526047 | 2_2:-16524497 | None:intergenic |
| AGTCCTCCGAACTTGAATGT+AGG | 0.533993 | 2_2:-16527328 | None:intergenic |
| GTCCTCCGAACTTGAATGTA+GGG | 0.534762 | 2_2:-16527327 | None:intergenic |
| TGATGGAAATGTTCCCTACT+GGG | 0.542317 | 2_2:+16526093 | Msa0241080:CDS |
| TAACAAGATAATTCAAGATG+TGG | 0.543598 | 2_2:-16527920 | None:intergenic |
| TTAGGCTTGTGTAGGTTCAA+CGG | 0.544024 | 2_2:-16525983 | None:intergenic |
| TGGTCCCACTATTCGTTCAA+CGG | 0.545920 | 2_2:-16526032 | None:intergenic |
| TGGAGTTAAGAATTCCAAGT+TGG | 0.547006 | 2_2:+16524424 | Msa0241080:five_prime_UTR |
| GTCTGAAAGGAATGATGCCT+GGG | 0.549782 | 2_2:+16527575 | Msa0241080:CDS |
| TGAAAGCAAAGAACTGTGGT+TGG | 0.552421 | 2_2:+16525864 | Msa0241080:CDS |
| GGAGACAAAATTAAGATCAC+AGG | 0.554493 | 2_2:+16526538 | Msa0241080:CDS |
| GATCCTTTCGAGAGAGGGAA+AGG | 0.554605 | 2_2:-16524492 | None:intergenic |
| CTTTCGAGAGAGGGAAAGGT+CGG | 0.556230 | 2_2:-16524488 | None:intergenic |
| CGACCTTTCCCTCTCTCGAA+AGG | 0.556712 | 2_2:+16524489 | Msa0241080:five_prime_UTR |
| AAACTTTCGGGATAAATCAT+GGG | 0.573214 | 2_2:+16525820 | Msa0241080:CDS |
| TTATGATCCCGAAACAGGAA+AGG | 0.576306 | 2_2:+16526462 | Msa0241080:CDS |
| TTTCGAGAGAGGGAAAGGTC+GGG | 0.578165 | 2_2:-16524487 | None:intergenic |
| AAGCAAAGAACTGTGGTTGG+AGG | 0.580752 | 2_2:+16525867 | Msa0241080:CDS |
| ATAACTCTGTCCCTCCCAGT+AGG | 0.582469 | 2_2:-16526107 | None:intergenic |
| CTACACTCCGAGAAGCCAAA+GGG | 0.584508 | 2_2:+16524453 | Msa0241080:five_prime_UTR |
| TAACTCTGTCCCTCCCAGTA+GGG | 0.586338 | 2_2:-16526106 | None:intergenic |
| CTACAGACACCATTCTTGGA+AGG | 0.586410 | 2_2:-16526490 | None:intergenic |
| GTTTCCGTTGAACGAATAGT+GGG | 0.586815 | 2_2:+16526028 | Msa0241080:CDS |
| AAAAGCATTACCTTCCCTGA+GGG | 0.587558 | 2_2:-16527205 | None:intergenic |
| CATGTTGTGATCAATCATGA+TGG | 0.590540 | 2_2:+16526076 | Msa0241080:CDS |
| AGAGAGGAGAAGAACAGGAA+TGG | 0.590547 | 2_2:+16527463 | Msa0241080:CDS |
| GAGTGTAGTCTTCGCCAACT+TGG | 0.591601 | 2_2:-16524438 | None:intergenic |
| TCGGGATAAATCATGGGCAC+CGG | 0.594074 | 2_2:+16525826 | Msa0241080:CDS |
| GAGGAGAAGAACAGGAATGG+TGG | 0.603887 | 2_2:+16527466 | Msa0241080:CDS |
| GTCCCTACATTCAAGTTCGG+AGG | 0.619626 | 2_2:+16527325 | Msa0241080:CDS |
| TCAAGTTCGGAGGACTAGCA+TGG | 0.624802 | 2_2:+16527335 | Msa0241080:CDS |
| ACTACACTCCGAGAAGCCAA+AGG | 0.627391 | 2_2:+16524452 | Msa0241080:five_prime_UTR |
| GGAAATGTTCCCTACTGGGA+GGG | 0.629303 | 2_2:+16526097 | Msa0241080:CDS |
| AGTGGGACCAAAGGCTCCTG+GGG | 0.631009 | 2_2:+16526045 | Msa0241080:CDS |
| GGCTTGTGTAGGTTCAACGG+AGG | 0.635060 | 2_2:-16525980 | None:intergenic |
| ACAACATGACAAGTTTCCCC+AGG | 0.635964 | 2_2:-16526061 | None:intergenic |
| CGACCGAGCCCTCAGCAGAG+AGG | 0.636780 | 2_2:+16527447 | Msa0241080:CDS |
| TTCATATCCAAAGCAAACAC+CGG | 0.638479 | 2_2:-16525845 | None:intergenic |
| GAATATAGTCGAACATTATG+CGG | 0.645209 | 2_2:-16526367 | None:intergenic |
| GGAGCTCACATCTATTTCTG+TGG | 0.651394 | 2_2:+16527553 | Msa0241080:CDS |
| TGAACGAATAGTGGGACCAA+AGG | 0.654010 | 2_2:+16526036 | Msa0241080:CDS |
| AACTTAAGAAGAACAAACAA+TGG | 0.654362 | 2_2:+16527662 | Msa0241080:CDS |
| CAAAAGCATTACCTTCCCTG+AGG | 0.658205 | 2_2:-16527206 | None:intergenic |
| AAAAGGGTTGCTGAGAACAG+AGG | 0.661866 | 2_2:+16527613 | Msa0241080:CDS |
| TATATTCAATTGCTTCCACA+AGG | 0.661869 | 2_2:+16526383 | Msa0241080:CDS |
| TATCAGAATTTGCAACACCA+AGG | 0.669441 | 2_2:-16527363 | None:intergenic |
| CGGGATCATAATAAACAGCA+CGG | 0.682859 | 2_2:-16526450 | None:intergenic |
| GTATGTTCAGGATAAGATCG+AGG | 0.690739 | 2_2:+16527495 | Msa0241080:CDS |
| TGGAAATGTTCCCTACTGGG+AGG | 0.698603 | 2_2:+16526096 | Msa0241080:CDS |
| GATATGAAAGCAAAGAACTG+TGG | 0.703274 | 2_2:+16525860 | Msa0241080:CDS |
| AAAGCATTACCTTCCCTGAG+GGG | 0.706019 | 2_2:-16527204 | None:intergenic |
| ATAGTAGTAGAGTAGTAACG+AGG | 0.707605 | 2_2:-16524566 | None:intergenic |
| CTTAAACACAGATCTTCTGG+CGG | 0.716512 | 2_2:-16524989 | None:intergenic |
| CAGTGCTAGAGACATGTTTG+GGG | 0.723523 | 2_2:+16527884 | Msa0241080:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTCTTTTCAATAT+GGG | + | chr2_2:16524740-16524759 | Msa0241080:intron | 10.0% |
| !!! | ATAAATAAAAAGTACAAATT+GGG | - | chr2_2:16524834-16524853 | None:intergenic | 10.0% |
| !!! | AATAAATAAAAAGTACAAAT+TGG | - | chr2_2:16524835-16524854 | None:intergenic | 10.0% |
| !! | CATATTGAAAAGAAATAAAA+AGG | - | chr2_2:16524741-16524760 | None:intergenic | 15.0% |
| !!! | CTTTTTATTTCTTTTCAATA+TGG | + | chr2_2:16524739-16524758 | Msa0241080:intron | 15.0% |
| !! | TGAATGAATATATTTATTTG+CGG | + | chr2_2:16524778-16524797 | Msa0241080:intron | 15.0% |
| !!! | TAAATAAAAAGTACAAATTG+GGG | - | chr2_2:16524833-16524852 | None:intergenic | 15.0% |
| !!! | TTTTTATGACTAATTTGATT+TGG | + | chr2_2:16525275-16525294 | Msa0241080:intron | 15.0% |
| !!! | ATTTGATTTGGTAAATTTTA+TGG | + | chr2_2:16525287-16525306 | Msa0241080:intron | 15.0% |
| !! | CAAATGAATAATATTATGTT+AGG | + | chr2_2:16525498-16525517 | Msa0241080:intron | 15.0% |
| !! | AATTATCTTGTTAAACAATA+AGG | + | chr2_2:16527930-16527949 | Msa0241080:three_prime_UTR | 15.0% |
| !!! | TAAAAAGGTGAAATTTTGAT+GGG | - | chr2_2:16524726-16524745 | None:intergenic | 20.0% |
| !!! | ATAAAAAGGTGAAATTTTGA+TGG | - | chr2_2:16524727-16524746 | None:intergenic | 20.0% |
| !!! | TAATAAGCAATTATTTCTCT+TGG | - | chr2_2:16525448-16525467 | None:intergenic | 20.0% |
| !! | GAAATAATTGCTTATTATTG+TGG | + | chr2_2:16525451-16525470 | Msa0241080:intron | 20.0% |
| !!! | TACTTTGTTATGAGTTATTT+TGG | + | chr2_2:16525528-16525547 | Msa0241080:intron | 20.0% |
| !!! | AATACAATCTCTTATTTTAG+TGG | - | chr2_2:16525705-16525724 | None:intergenic | 20.0% |
| !! | ATGAATTTACATTCAGTATT+TGG | - | chr2_2:16526164-16526183 | None:intergenic | 20.0% |
| !! | TACTGAATGTAAATTCATAA+CGG | + | chr2_2:16526166-16526185 | Msa0241080:intron | 20.0% |
| !!! | AACATTTTTTACTTAGGAAA+AGG | + | chr2_2:16526569-16526588 | Msa0241080:intron | 20.0% |
| !! | ATAATTTCAAGAAGTTGAAA+AGG | - | chr2_2:16526614-16526633 | None:intergenic | 20.0% |
| !! | TTCTTTTCAATATGGGTTTT+TGG | + | chr2_2:16524747-16524766 | Msa0241080:intron | 25.0% |
| !! | AATCAATACTCAAACTTTTG+TGG | + | chr2_2:16524900-16524919 | Msa0241080:intron | 25.0% |
| !!! | CTTTTGTGGTTTTTTTTTTG+TGG | + | chr2_2:16524914-16524933 | Msa0241080:intron | 25.0% |
| !!! | GTTTTTTTTGTTTTTGCAGA+TGG | + | chr2_2:16524936-16524955 | Msa0241080:intron | 25.0% |
| !!! | TTTTACTTCGCTTTTAAACA+TGG | + | chr2_2:16525021-16525040 | Msa0241080:intron | 25.0% |
| ! | TTACAATAATAGTTCCTTCA+AGG | - | chr2_2:16525324-16525343 | None:intergenic | 25.0% |
| ! | GGAACTATTATTGTAATTGA+TGG | + | chr2_2:16525328-16525347 | Msa0241080:intron | 25.0% |
| ! | ATACAGAAATGAACTGAATA+AGG | - | chr2_2:16525365-16525384 | None:intergenic | 25.0% |
| ! | CATTACTTAAAGAGCTAAAA+AGG | - | chr2_2:16526194-16526213 | None:intergenic | 25.0% |
| ! | TCATCAATACTATTGTACAT+GGG | + | chr2_2:16526311-16526330 | Msa0241080:intron | 25.0% |
| !!! | AGGCAAAACATTTTTTACTT+AGG | + | chr2_2:16526563-16526582 | Msa0241080:intron | 25.0% |
| ! | ATGCATTACTTTGTTGAAAT+TGG | - | chr2_2:16526640-16526659 | None:intergenic | 25.0% |
| ! | TCACATCAAACTTTCTAATA+TGG | - | chr2_2:16526767-16526786 | None:intergenic | 25.0% |
| !! | AATAGCGGTATTTTCAAATT+CGG | - | chr2_2:16526952-16526971 | None:intergenic | 25.0% |
| ! | TTTGAAAACTTGATTCTTGT+TGG | + | chr2_2:16527138-16527157 | Msa0241080:intron | 25.0% |
| ! | TTGAAAACTTGATTCTTGTT+GGG | + | chr2_2:16527139-16527158 | Msa0241080:intron | 25.0% |
| !! | AAATCCTACAAATATTTTGC+AGG | + | chr2_2:16527181-16527200 | Msa0241080:intron | 25.0% |
| ! | AACTTAAGAAGAACAAACAA+TGG | + | chr2_2:16527662-16527681 | Msa0241080:CDS | 25.0% |
| !! | ATGATGTATTGTTTTCTTGA+TGG | + | chr2_2:16527832-16527851 | Msa0241080:three_prime_UTR | 25.0% |
| ! | TAACAAGATAATTCAAGATG+TGG | - | chr2_2:16527923-16527942 | None:intergenic | 25.0% |
| !!! | ACACTTTTTGATATCATTCT+AGG | - | chr2_2:16527987-16528006 | None:intergenic | 25.0% |
| ! | ATAAAAAGTACAAATTGGGG+TGG | - | chr2_2:16524830-16524849 | None:intergenic | 30.0% |
| TTTAACATGACATAACATGC+AGG | - | chr2_2:16525064-16525083 | None:intergenic | 30.0% | |
| TGGAGTCATTGAAGTAAAAT+GGG | - | chr2_2:16525097-16525116 | None:intergenic | 30.0% | |
| TTGAATGTAACTACAAGTGT+CGG | - | chr2_2:16525131-16525150 | None:intergenic | 30.0% | |
| ACAGATCCTTTATACAATTG+GGG | - | chr2_2:16525245-16525264 | None:intergenic | 30.0% | |
| CACAGATCCTTTATACAATT+GGG | - | chr2_2:16525246-16525265 | None:intergenic | 30.0% | |
| TCATTTGCATCAAATCAAAG+TGG | - | chr2_2:16525485-16525504 | None:intergenic | 30.0% | |
| !!! | CGTGTCTAGTTTTGTTATAT+AGG | + | chr2_2:16525617-16525636 | Msa0241080:intron | 30.0% |
| AAAATTGAACTTGATGTTGC+AGG | + | chr2_2:16525787-16525806 | Msa0241080:intron | 30.0% | |
| AGGCATCTAACATAAACTTT+CGG | + | chr2_2:16525807-16525826 | Msa0241080:intron | 30.0% | |
| TAAACTTTCGGGATAAATCA+TGG | + | chr2_2:16525819-16525838 | Msa0241080:CDS | 30.0% | |
| AAACTTTCGGGATAAATCAT+GGG | + | chr2_2:16525820-16525839 | Msa0241080:CDS | 30.0% | |
| !! | AGGATTTTCCAATTCTAAAG+GGG | - | chr2_2:16525954-16525973 | None:intergenic | 30.0% |
| ! | CAGGATTTTCCAATTCTAAA+GGG | - | chr2_2:16525955-16525974 | None:intergenic | 30.0% |
| GAAACAATTGTTGCTGTATA+GGG | - | chr2_2:16526013-16526032 | None:intergenic | 30.0% | |
| CTCATCAATACTATTGTACA+TGG | + | chr2_2:16526310-16526329 | Msa0241080:intron | 30.0% | |
| GAATATAGTCGAACATTATG+CGG | - | chr2_2:16526370-16526389 | None:intergenic | 30.0% | |
| TATATTCAATTGCTTCCACA+AGG | + | chr2_2:16526383-16526402 | Msa0241080:CDS | 30.0% | |
| CAAAATTAAGATCACAGGTA+AGG | + | chr2_2:16526543-16526562 | Msa0241080:intron | 30.0% | |
| ACTTTCTAATATGGTGTGTA+GGG | - | chr2_2:16526758-16526777 | None:intergenic | 30.0% | |
| AACTTTCTAATATGGTGTGT+AGG | - | chr2_2:16526759-16526778 | None:intergenic | 30.0% | |
| ATTAGAAAGTTTGATGTGAC+CGG | + | chr2_2:16526768-16526787 | Msa0241080:intron | 30.0% | |
| ATGCATAGTAAGAATTCCAA+TGG | - | chr2_2:16526887-16526906 | None:intergenic | 30.0% | |
| !! | ATTTAACAGCATTGATACAG+AGG | - | chr2_2:16526915-16526934 | None:intergenic | 30.0% |
| GTATCAATGCTGTTAAATAG+CGG | + | chr2_2:16526917-16526936 | Msa0241080:intron | 30.0% | |
| TACAAAATGTTGTCAAACAG+TGG | + | chr2_2:16526993-16527012 | Msa0241080:intron | 30.0% | |
| TCACTTGCTTAAATGATGAA+TGG | + | chr2_2:16527081-16527100 | Msa0241080:intron | 30.0% | |
| CACTTGCTTAAATGATGAAT+GGG | + | chr2_2:16527082-16527101 | Msa0241080:intron | 30.0% | |
| TCATTATATGGGTAGCATTT+GGG | - | chr2_2:16527243-16527262 | None:intergenic | 30.0% | |
| ATCATTATATGGGTAGCATT+TGG | - | chr2_2:16527244-16527263 | None:intergenic | 30.0% | |
| ACCAGTAGCAATCATTATAT+GGG | - | chr2_2:16527254-16527273 | None:intergenic | 30.0% | |
| TACCAGTAGCAATCATTATA+TGG | - | chr2_2:16527255-16527274 | None:intergenic | 30.0% | |
| ! | TGGATAATCCTTAAGGTATT+TGG | - | chr2_2:16527413-16527432 | None:intergenic | 30.0% |
| ATCTTTAAGCTCTTGGATAA+TGG | + | chr2_2:16527532-16527551 | Msa0241080:CDS | 30.0% | |
| TGGAGTTAAGAATTCCAAGT+TGG | + | chr2_2:16524424-16524443 | Msa0241080:five_prime_UTR | 35.0% | |
| ATAGTAGTAGAGTAGTAACG+AGG | - | chr2_2:16524569-16524588 | None:intergenic | 35.0% | |
| !! | CATGATTGATAATGAGGAAG+AGG | - | chr2_2:16524615-16524634 | None:intergenic | 35.0% |
| !! | GTGAGACATGATTGATAATG+AGG | - | chr2_2:16524621-16524640 | None:intergenic | 35.0% |
| AGAACGCAAAAAGGAAGAAA+AGG | - | chr2_2:16524679-16524698 | None:intergenic | 35.0% | |
| TTTGCAGATAGAACGCAAAA+AGG | - | chr2_2:16524688-16524707 | None:intergenic | 35.0% | |
| ! | TTTTGCGTTCTATCTGCAAA+TGG | + | chr2_2:16524688-16524707 | Msa0241080:intron | 35.0% |
| TTTGCGTTCTATCTGCAAAT+GGG | + | chr2_2:16524689-16524708 | Msa0241080:intron | 35.0% | |
| TTATTTGCGGAACTTCAAAG+CGG | + | chr2_2:16524791-16524810 | Msa0241080:intron | 35.0% | |
| AACCTTAAACACAGATCTTC+TGG | - | chr2_2:16524995-16525014 | None:intergenic | 35.0% | |
| !! | ACTTCGCTTTTAAACATGGT+CGG | + | chr2_2:16525025-16525044 | Msa0241080:intron | 35.0% |
| TGAAGTAAAATGGGGTTTCA+TGG | - | chr2_2:16525088-16525107 | None:intergenic | 35.0% | |
| GGAGTCATTGAAGTAAAATG+GGG | - | chr2_2:16525096-16525115 | None:intergenic | 35.0% | |
| GTGGAGTCATTGAAGTAAAA+TGG | - | chr2_2:16525098-16525117 | None:intergenic | 35.0% | |
| TTTACTTCAATGACTCCACT+TGG | + | chr2_2:16525099-16525118 | Msa0241080:intron | 35.0% | |
| TCTACGTGTTAGTGTATCTT+AGG | + | chr2_2:16525184-16525203 | Msa0241080:intron | 35.0% | |
| CATAGACCCCAATTGTATAA+AGG | + | chr2_2:16525236-16525255 | Msa0241080:intron | 35.0% | |
| GCACAGATCCTTTATACAAT+TGG | - | chr2_2:16525247-16525266 | None:intergenic | 35.0% | |
| ! | GACGGGTTTAAGTATTAGTA+TGG | + | chr2_2:16525397-16525416 | Msa0241080:intron | 35.0% |
| GGCATCTAACATAAACTTTC+GGG | + | chr2_2:16525808-16525827 | Msa0241080:intron | 35.0% | |
| TTCATATCCAAAGCAAACAC+CGG | - | chr2_2:16525848-16525867 | None:intergenic | 35.0% | |
| GATATGAAAGCAAAGAACTG+TGG | + | chr2_2:16525860-16525879 | Msa0241080:CDS | 35.0% | |
| ! | GCAGGATTTTCCAATTCTAA+AGG | - | chr2_2:16525956-16525975 | None:intergenic | 35.0% |
| GGAAACAATTGTTGCTGTAT+AGG | - | chr2_2:16526014-16526033 | None:intergenic | 35.0% | |
| CATGTTGTGATCAATCATGA+TGG | + | chr2_2:16526076-16526095 | Msa0241080:CDS | 35.0% | |
| TTGGATAACAAGTCACTTAC+TGG | - | chr2_2:16526145-16526164 | None:intergenic | 35.0% | |
| TCAATACTATTGTACATGGG+TGG | + | chr2_2:16526314-16526333 | Msa0241080:intron | 35.0% | |
| GGGTGAAAATCCAAAAAAAC+CGG | + | chr2_2:16526339-16526358 | Msa0241080:intron | 35.0% | |
| GGTGAAAATCCAAAAAAACC+GGG | + | chr2_2:16526340-16526359 | Msa0241080:CDS | 35.0% | |
| AAAAAAGTCTCCATACCTTG+TGG | - | chr2_2:16526401-16526420 | None:intergenic | 35.0% | |
| !!! | AGGTATGGAGACTTTTTTGA+TGG | + | chr2_2:16526403-16526422 | Msa0241080:CDS | 35.0% |
| GTTTATTATGATCCCGAAAC+AGG | + | chr2_2:16526457-16526476 | Msa0241080:CDS | 35.0% | |
| ! | GTGATCTTAATTTTGTCTCC+AGG | - | chr2_2:16526538-16526557 | None:intergenic | 35.0% |
| GGAGACAAAATTAAGATCAC+AGG | + | chr2_2:16526538-16526557 | Msa0241080:CDS | 35.0% | |
| !! | CTGTGTCGATTGTTATTTGT+TGG | + | chr2_2:16526852-16526871 | Msa0241080:intron | 35.0% |
| GGAATTCTTACTATGCATGA+TGG | + | chr2_2:16526889-16526908 | Msa0241080:intron | 35.0% | |
| AGCATATTGTGAGACAATAG+CGG | - | chr2_2:16526967-16526986 | None:intergenic | 35.0% | |
| TCACATAGAGTGCATTATCT+TGG | - | chr2_2:16527055-16527074 | None:intergenic | 35.0% | |
| AAACTTGATTCTTGTTGGGT+AGG | + | chr2_2:16527143-16527162 | Msa0241080:intron | 35.0% | |
| ACCCATATAATGATTGCTAC+TGG | + | chr2_2:16527250-16527269 | Msa0241080:CDS | 35.0% | |
| ATAATGATTGCTACTGGTAC+TGG | + | chr2_2:16527256-16527275 | Msa0241080:CDS | 35.0% | |
| TATCAGAATTTGCAACACCA+AGG | - | chr2_2:16527366-16527385 | None:intergenic | 35.0% | |
| AGTTCTCTGGATAATCCTTA+AGG | - | chr2_2:16527420-16527439 | None:intergenic | 35.0% | |
| CGATGAAATCTTTAAGCTCT+TGG | + | chr2_2:16527525-16527544 | Msa0241080:CDS | 35.0% | |
| !! | ATCTATTTCTGTGGTCTGAA+AGG | + | chr2_2:16527562-16527581 | Msa0241080:CDS | 35.0% |
| GATCCAAGAAACACTGAAAA+GGG | + | chr2_2:16527597-16527616 | Msa0241080:CDS | 35.0% | |
| ! | TCAAAAAGTGTGAAATCGTG+AGG | + | chr2_2:16527996-16528015 | Msa0241080:three_prime_UTR | 35.0% |
| TGAATGATCCTTTCGAGAGA+GGG | - | chr2_2:16524500-16524519 | None:intergenic | 40.0% | |
| ATGAATGATCCTTTCGAGAG+AGG | - | chr2_2:16524501-16524520 | None:intergenic | 40.0% | |
| CTTAAACACAGATCTTCTGG+CGG | - | chr2_2:16524992-16525011 | None:intergenic | 40.0% | |
| TTAGGTGTCCGTATATATGC+CGG | + | chr2_2:16525202-16525221 | Msa0241080:intron | 40.0% | |
| !! | TGGCTTTTGAGAAACCTTGA+AGG | + | chr2_2:16525307-16525326 | Msa0241080:intron | 40.0% |
| !!! | TTTTGGTTTTGCAAGACCTG+TGG | + | chr2_2:16525545-16525564 | Msa0241080:intron | 40.0% |
| ! | ACACAGACTTTGATAACCAC+AGG | - | chr2_2:16525564-16525583 | None:intergenic | 40.0% |
| TGAAAGCAAAGAACTGTGGT+TGG | + | chr2_2:16525864-16525883 | Msa0241080:CDS | 40.0% | |
| TTAGGCTTGTGTAGGTTCAA+CGG | - | chr2_2:16525986-16526005 | None:intergenic | 40.0% | |
| GTTGCTGTATAGGGTTCTTT+AGG | - | chr2_2:16526004-16526023 | None:intergenic | 40.0% | |
| TGTTTCCGTTGAACGAATAG+TGG | + | chr2_2:16526027-16526046 | Msa0241080:CDS | 40.0% | |
| GTTTCCGTTGAACGAATAGT+GGG | + | chr2_2:16526028-16526047 | Msa0241080:CDS | 40.0% | |
| ! | ATGATGGAAATGTTCCCTAC+TGG | + | chr2_2:16526092-16526111 | Msa0241080:CDS | 40.0% |
| TGATGGAAATGTTCCCTACT+GGG | + | chr2_2:16526093-16526112 | Msa0241080:CDS | 40.0% | |
| GATAACAAGTCACTTACTGG+TGG | - | chr2_2:16526142-16526161 | None:intergenic | 40.0% | |
| TCAATTGCTTCCACAAGGTA+TGG | + | chr2_2:16526388-16526407 | Msa0241080:CDS | 40.0% | |
| CGGGATCATAATAAACAGCA+CGG | - | chr2_2:16526453-16526472 | None:intergenic | 40.0% | |
| TTATGATCCCGAAACAGGAA+AGG | + | chr2_2:16526462-16526481 | Msa0241080:CDS | 40.0% | |
| AGGATCTTCCTTTCCTGTTT+CGG | - | chr2_2:16526473-16526492 | None:intergenic | 40.0% | |
| AAGGAAGATCCTTCCAAGAA+TGG | + | chr2_2:16526481-16526500 | Msa0241080:CDS | 40.0% | |
| ATTGCTACAGACACCATTCT+TGG | - | chr2_2:16526497-16526516 | None:intergenic | 40.0% | |
| ! | TTTTTGTGTGACTCAAAGCC+TGG | + | chr2_2:16526517-16526536 | Msa0241080:CDS | 40.0% |
| GGAGACAAAACTTTGCAAAC+CGG | - | chr2_2:16526790-16526809 | None:intergenic | 40.0% | |
| ! | CACGTTCATGCAGTACTTTT+AGG | - | chr2_2:16526811-16526830 | None:intergenic | 40.0% |
| !! | GTCGATTGTTATTTGTTGGC+TGG | + | chr2_2:16526856-16526875 | Msa0241080:intron | 40.0% |
| !! | TTGTTGGCTGGTTTATCCAT+TGG | + | chr2_2:16526868-16526887 | Msa0241080:intron | 40.0% |
| ATGATGAATGGGAACAGTTG+AGG | + | chr2_2:16527093-16527112 | Msa0241080:intron | 40.0% | |
| TGATGAATGGGAACAGTTGA+GGG | + | chr2_2:16527094-16527113 | Msa0241080:intron | 40.0% | |
| !! | AAAAGCATTACCTTCCCTGA+GGG | - | chr2_2:16527208-16527227 | None:intergenic | 40.0% |
| CTATCTTCGTCGAATGTTCA+TGG | + | chr2_2:16527297-16527316 | Msa0241080:CDS | 40.0% | |
| ! | TCAGTCCCTACATTCAAGTT+CGG | + | chr2_2:16527322-16527341 | Msa0241080:CDS | 40.0% |
| CGAGTTCACCAAATACCTTA+AGG | + | chr2_2:16527402-16527421 | Msa0241080:CDS | 40.0% | |
| AGGATTATCCAGAGAACTTC+CGG | + | chr2_2:16527422-16527441 | Msa0241080:CDS | 40.0% | |
| TGGTGGCAAAATGTATGTTC+AGG | + | chr2_2:16527483-16527502 | Msa0241080:CDS | 40.0% | |
| GTATGTTCAGGATAAGATCG+AGG | + | chr2_2:16527495-16527514 | Msa0241080:CDS | 40.0% | |
| GGATCCAAGAAACACTGAAA+AGG | + | chr2_2:16527596-16527615 | Msa0241080:CDS | 40.0% | |
| ! | CAACCCTTTTCAGTGTTTCT+TGG | - | chr2_2:16527603-16527622 | None:intergenic | 40.0% |
| TGAGAACAGAGGAGAAAGTT+GGG | + | chr2_2:16527624-16527643 | Msa0241080:CDS | 40.0% | |
| AGGTCATGCTCAAATTCTAC+TGG | - | chr2_2:16527967-16527986 | None:intergenic | 40.0% | |
| ! | TGTTCTTCCCTTTGGCTTCT+CGG | - | chr2_2:16524463-16524482 | None:intergenic | 45.0% |
| GTCTCACTTGTCAGCTTCTA+AGG | + | chr2_2:16524634-16524653 | Msa0241080:CDS | 45.0% | |
| GCGGAGAAATCATTGCTAAC+AGG | - | chr2_2:16524973-16524992 | None:intergenic | 45.0% | |
| CGCCAGAAGATCTGTGTTTA+AGG | + | chr2_2:16524990-16525009 | Msa0241080:CDS | 45.0% | |
| !! | AAGTGTCGGAGTTATCCAAG+TGG | - | chr2_2:16525117-16525136 | None:intergenic | 45.0% |
| AATTGGGGTCTATGAAGCAC+TGG | - | chr2_2:16525230-16525249 | None:intergenic | 45.0% | |
| CTGTATCTCCAATACTGCGA+CGG | + | chr2_2:16525379-16525398 | Msa0241080:intron | 45.0% | |
| TGTATCTCCAATACTGCGAC+GGG | + | chr2_2:16525380-16525399 | Msa0241080:intron | 45.0% | |
| ACTTAAACCCGTCGCAGTAT+TGG | - | chr2_2:16525390-16525409 | None:intergenic | 45.0% | |
| AAGCAAAGAACTGTGGTTGG+AGG | + | chr2_2:16525867-16525886 | Msa0241080:CDS | 45.0% | |
| AAAGGGGAGACAGCAACTTT+GGG | - | chr2_2:16525938-16525957 | None:intergenic | 45.0% | |
| TAAAGGGGAGACAGCAACTT+TGG | - | chr2_2:16525939-16525958 | None:intergenic | 45.0% | |
| !! | TGCTGTCTCCCCTTTAGAAT+TGG | + | chr2_2:16525943-16525962 | Msa0241080:CDS | 45.0% |
| AGGGTTCTTTAGGCTTGTGT+AGG | - | chr2_2:16525994-16526013 | None:intergenic | 45.0% | |
| TGGTCCCACTATTCGTTCAA+CGG | - | chr2_2:16526035-16526054 | None:intergenic | 45.0% | |
| ! | TGAACGAATAGTGGGACCAA+AGG | + | chr2_2:16526036-16526055 | Msa0241080:CDS | 45.0% |
| ACAACATGACAAGTTTCCCC+AGG | - | chr2_2:16526064-16526083 | None:intergenic | 45.0% | |
| TACTATTGTACATGGGTGGC+AGG | + | chr2_2:16526318-16526337 | Msa0241080:intron | 45.0% | |
| ACTATTGTACATGGGTGGCA+GGG | + | chr2_2:16526319-16526338 | Msa0241080:intron | 45.0% | |
| GGATCTTCCTTTCCTGTTTC+GGG | - | chr2_2:16526472-16526491 | None:intergenic | 45.0% | |
| CTACAGACACCATTCTTGGA+AGG | - | chr2_2:16526493-16526512 | None:intergenic | 45.0% | |
| GAGTGCATTATCTTGGATCG+AGG | - | chr2_2:16527048-16527067 | None:intergenic | 45.0% | |
| GGGGCCTGCAAAATATTTGT+AGG | - | chr2_2:16527188-16527207 | None:intergenic | 45.0% | |
| ! | AAATATTTTGCAGGCCCCTC+AGG | + | chr2_2:16527190-16527209 | Msa0241080:intron | 45.0% |
| ! | AATATTTTGCAGGCCCCTCA+GGG | + | chr2_2:16527191-16527210 | Msa0241080:intron | 45.0% |
| ! | AAAGCATTACCTTCCCTGAG+GGG | - | chr2_2:16527207-16527226 | None:intergenic | 45.0% |
| !! | CAAAAGCATTACCTTCCCTG+AGG | - | chr2_2:16527209-16527228 | None:intergenic | 45.0% |
| ! | GAAGGTAATGCTTTTGCCAG+AGG | + | chr2_2:16527213-16527232 | Msa0241080:CDS | 45.0% |
| !! | ACTGGTGTTGCTCCATATAG+AGG | + | chr2_2:16527274-16527293 | Msa0241080:CDS | 45.0% |
| CGACGAAGATAGCCTCTATA+TGG | - | chr2_2:16527289-16527308 | None:intergenic | 45.0% | |
| GTCCTCCGAACTTGAATGTA+GGG | - | chr2_2:16527330-16527349 | None:intergenic | 45.0% | |
| AGTCCTCCGAACTTGAATGT+AGG | - | chr2_2:16527331-16527350 | None:intergenic | 45.0% | |
| AGAGAGGAGAAGAACAGGAA+TGG | + | chr2_2:16527463-16527482 | Msa0241080:CDS | 45.0% | |
| !! | GGAGCTCACATCTATTTCTG+TGG | + | chr2_2:16527553-16527572 | Msa0241080:CDS | 45.0% |
| GTCTGAAAGGAATGATGCCT+GGG | + | chr2_2:16527575-16527594 | Msa0241080:CDS | 45.0% | |
| TTCAGTGTTTCTTGGATCCC+AGG | - | chr2_2:16527595-16527614 | None:intergenic | 45.0% | |
| AAAAGGGTTGCTGAGAACAG+AGG | + | chr2_2:16527613-16527632 | Msa0241080:CDS | 45.0% | |
| CTGAGAACAGAGGAGAAAGT+TGG | + | chr2_2:16527623-16527642 | Msa0241080:CDS | 45.0% | |
| AGCAGTGCTAGAGACATGTT+TGG | + | chr2_2:16527882-16527901 | Msa0241080:three_prime_UTR | 45.0% | |
| GCAGTGCTAGAGACATGTTT+GGG | + | chr2_2:16527883-16527902 | Msa0241080:three_prime_UTR | 45.0% | |
| CAGTGCTAGAGACATGTTTG+GGG | + | chr2_2:16527884-16527903 | Msa0241080:three_prime_UTR | 45.0% | |
| !!! | TTTATTTATTTATTTGTTTT+AGG | + | chr2_2:16524849-16524868 | Msa0241080:intron | 5.0% |
| GAGTGTAGTCTTCGCCAACT+TGG | - | chr2_2:16524441-16524460 | None:intergenic | 50.0% | |
| ACTACACTCCGAGAAGCCAA+AGG | + | chr2_2:16524452-16524471 | Msa0241080:five_prime_UTR | 50.0% | |
| CTACACTCCGAGAAGCCAAA+GGG | + | chr2_2:16524453-16524472 | Msa0241080:five_prime_UTR | 50.0% | |
| CGGGTTCTTGTTCTTCCCTT+TGG | - | chr2_2:16524471-16524490 | None:intergenic | 50.0% | |
| TTTCGAGAGAGGGAAAGGTC+GGG | - | chr2_2:16524490-16524509 | None:intergenic | 50.0% | |
| CTTTCGAGAGAGGGAAAGGT+CGG | - | chr2_2:16524491-16524510 | None:intergenic | 50.0% | |
| GATCCTTTCGAGAGAGGGAA+AGG | - | chr2_2:16524495-16524514 | None:intergenic | 50.0% | |
| !! | CACTGGCACCGGCATATATA+CGG | - | chr2_2:16525213-16525232 | None:intergenic | 50.0% |
| TCGGGATAAATCATGGGCAC+CGG | + | chr2_2:16525826-16525845 | Msa0241080:CDS | 50.0% | |
| TGGAAATGTTCCCTACTGGG+AGG | + | chr2_2:16526096-16526115 | Msa0241080:CDS | 50.0% | |
| GGAAATGTTCCCTACTGGGA+GGG | + | chr2_2:16526097-16526116 | Msa0241080:CDS | 50.0% | |
| TAACTCTGTCCCTCCCAGTA+GGG | - | chr2_2:16526109-16526128 | None:intergenic | 50.0% | |
| ATAACTCTGTCCCTCCCAGT+AGG | - | chr2_2:16526110-16526129 | None:intergenic | 50.0% | |
| TACTGGGAGGGACAGAGTTA+TGG | + | chr2_2:16526109-16526128 | Msa0241080:CDS | 50.0% | |
| ! | GTCCCTACATTCAAGTTCGG+AGG | + | chr2_2:16527325-16527344 | Msa0241080:CDS | 50.0% |
| ! | TCAAGTTCGGAGGACTAGCA+TGG | + | chr2_2:16527335-16527354 | Msa0241080:CDS | 50.0% |
| GTTCTTCTCCTCTCTGCTGA+GGG | - | chr2_2:16527458-16527477 | None:intergenic | 50.0% | |
| TGTTCTTCTCCTCTCTGCTG+AGG | - | chr2_2:16527459-16527478 | None:intergenic | 50.0% | |
| TCAGCAGAGAGGAGAAGAAC+AGG | + | chr2_2:16527458-16527477 | Msa0241080:CDS | 50.0% | |
| GAGGAGAAGAACAGGAATGG+TGG | + | chr2_2:16527466-16527485 | Msa0241080:CDS | 50.0% | |
| GGTCTGAAAGGAATGATGCC+TGG | + | chr2_2:16527574-16527593 | Msa0241080:CDS | 50.0% | |
| CGACCTTTCCCTCTCTCGAA+AGG | + | chr2_2:16524489-16524508 | Msa0241080:five_prime_UTR | 55.0% | |
| !! | GGTCTATGAAGCACTGGCAC+CGG | - | chr2_2:16525224-16525243 | None:intergenic | 55.0% |
| !! | ATGGGCACCGGTGTTTGCTT+TGG | + | chr2_2:16525838-16525857 | Msa0241080:CDS | 55.0% |
| GGCTTGTGTAGGTTCAACGG+AGG | - | chr2_2:16525983-16526002 | None:intergenic | 55.0% | |
| ! | ATAGTGGGACCAAAGGCTCC+TGG | + | chr2_2:16526043-16526062 | Msa0241080:CDS | 55.0% |
| TAGTGGGACCAAAGGCTCCT+GGG | + | chr2_2:16526044-16526063 | Msa0241080:CDS | 55.0% | |
| CAAGTTTCCCCAGGAGCCTT+TGG | - | chr2_2:16526055-16526074 | None:intergenic | 55.0% | |
| !!! | TGCGGAGCACCCGGTTTTTT+TGG | - | chr2_2:16526352-16526371 | None:intergenic | 55.0% |
| ! | CGAACATTATGCGGAGCACC+CGG | - | chr2_2:16526361-16526380 | None:intergenic | 55.0% |
| GTAGCATTTGGGTCGTCCTC+TGG | - | chr2_2:16527232-16527251 | None:intergenic | 55.0% | |
| ! | GGACTAGCATGGCTCTTCCT+TGG | + | chr2_2:16527346-16527365 | Msa0241080:CDS | 55.0% |
| AGGTTCAACGGAGGCTCAGC+AGG | - | chr2_2:16525974-16525993 | None:intergenic | 60.0% | |
| AGTGGGACCAAAGGCTCCTG+GGG | + | chr2_2:16526045-16526064 | Msa0241080:CDS | 60.0% | |
| ! | TTTTGCAGGCCCCTCAGGGA+AGG | + | chr2_2:16527195-16527214 | Msa0241080:intron | 60.0% |
| CGGTCGTACCGGAAGTTCTC+TGG | - | chr2_2:16527433-16527452 | None:intergenic | 60.0% | |
| TCTCCTCTCTGCTGAGGGCT+CGG | - | chr2_2:16527453-16527472 | None:intergenic | 60.0% | |
| AGCACGGCGCACACACAAGC+TGG | - | chr2_2:16526437-16526456 | None:intergenic | 65.0% | |
| ! | TGCTGAGGGCTCGGTCGTAC+CGG | - | chr2_2:16527444-16527463 | None:intergenic | 65.0% |
| CGACCGAGCCCTCAGCAGAG+AGG | + | chr2_2:16527447-16527466 | Msa0241080:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 16524414 | 16528053 | 16524414 | ID=Msa0241080;Name=Msa0241080 |
| chr2_2 | mRNA | 16524414 | 16528053 | 16524414 | ID=Msa0241080-mRNA-1;Parent=Msa0241080;Name=Msa0241080-mRNA-1;_AED=0.07;_eAED=0.07;_QI=218|1|1|1|1|1|5|351|378 |
| chr2_2 | exon | 16524414 | 16524655 | 16524414 | ID=Msa0241080-mRNA-1:exon:6781;Parent=Msa0241080-mRNA-1 |
| chr2_2 | exon | 16524955 | 16525011 | 16524955 | ID=Msa0241080-mRNA-1:exon:6782;Parent=Msa0241080-mRNA-1 |
| chr2_2 | exon | 16525809 | 16526144 | 16525809 | ID=Msa0241080-mRNA-1:exon:6783;Parent=Msa0241080-mRNA-1 |
| chr2_2 | exon | 16526340 | 16526559 | 16526340 | ID=Msa0241080-mRNA-1:exon:6784;Parent=Msa0241080-mRNA-1 |
| chr2_2 | exon | 16527203 | 16528053 | 16527203 | ID=Msa0241080-mRNA-1:exon:6785;Parent=Msa0241080-mRNA-1 |
| chr2_2 | five_prime_UTR | 16524414 | 16524631 | 16524414 | ID=Msa0241080-mRNA-1:five_prime_utr;Parent=Msa0241080-mRNA-1 |
| chr2_2 | CDS | 16524632 | 16524655 | 16524632 | ID=Msa0241080-mRNA-1:cds;Parent=Msa0241080-mRNA-1 |
| chr2_2 | CDS | 16524955 | 16525011 | 16524955 | ID=Msa0241080-mRNA-1:cds;Parent=Msa0241080-mRNA-1 |
| chr2_2 | CDS | 16525809 | 16526144 | 16525809 | ID=Msa0241080-mRNA-1:cds;Parent=Msa0241080-mRNA-1 |
| chr2_2 | CDS | 16526340 | 16526559 | 16526340 | ID=Msa0241080-mRNA-1:cds;Parent=Msa0241080-mRNA-1 |
| chr2_2 | CDS | 16527203 | 16527702 | 16527203 | ID=Msa0241080-mRNA-1:cds;Parent=Msa0241080-mRNA-1 |
| chr2_2 | three_prime_UTR | 16527703 | 16528053 | 16527703 | ID=Msa0241080-mRNA-1:three_prime_utr;Parent=Msa0241080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
