Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267230 | ABN09020.1 | 86.860 | 586 | 43 | 6 | 1 | 574 | 1 | 564 | 0.0 | 1013 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267230 | sp|O23732|GSHB_BRAJU | 67.137 | 496 | 142 | 2 | 79 | 574 | 56 | 530 | 0.0 | 725 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267230 | A2Q600 | 86.860 | 586 | 43 | 6 | 1 | 574 | 1 | 564 | 0.0 | 1013 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037720 | Msa0267230 | 0.806087 | 9.752457e-50 | -8.615850e-47 |
| Msa0083240 | Msa0267230 | 0.813472 | 2.516183e-51 | -8.615850e-47 |
| Msa0129640 | Msa0267230 | 0.812532 | 4.042837e-51 | -8.615850e-47 |
| Msa0241080 | Msa0267230 | 0.801957 | 7.047055e-49 | -8.615850e-47 |
| Msa0267230 | Msa0374290 | 0.803799 | 2.933431e-49 | -8.615850e-47 |
| Msa0267230 | Msa0381470 | 0.810909 | 9.119524e-51 | -8.615850e-47 |
| Msa0267230 | Msa0434140 | 0.816333 | 5.836226e-52 | -8.615850e-47 |
| Msa0267230 | Msa0455830 | 0.824587 | 7.446276e-54 | -8.615850e-47 |
| Msa0267230 | Msa0477660 | 0.805044 | 1.614468e-49 | -8.615850e-47 |
| Msa0267230 | Msa0480770 | 0.820946 | 5.241306e-53 | -8.615850e-47 |
| Msa0267230 | Msa0519910 | 0.809711 | 1.652936e-50 | -8.615850e-47 |
| Msa0267230 | Msa0521720 | 0.804575 | 2.022541e-49 | -8.615850e-47 |
| Msa0267230 | Msa0609270 | 0.827687 | 1.363016e-54 | -8.615850e-47 |
| Msa0267230 | Msa0622070 | 0.824602 | 7.386120e-54 | -8.615850e-47 |
| Msa0267230 | Msa0652700 | 0.824612 | 7.344791e-54 | -8.615850e-47 |
| Msa0267230 | Msa0749500 | 0.807535 | 4.821064e-50 | -8.615850e-47 |
| Msa0267230 | Msa0815650 | 0.813568 | 2.396974e-51 | -8.615850e-47 |
| Msa0267230 | Msa0831430 | 0.802571 | 5.266746e-49 | -8.615850e-47 |
| Msa0267230 | Msa0876790 | 0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0267230 | Msa0945230 | 0.817542 | 3.124338e-52 | -8.615850e-47 |
| Msa0267230 | Msa1038940 | 0.905679 | 3.325954e-80 | -8.615850e-47 |
| Msa0267230 | Msa1128720 | 0.961516 | 8.592058e-120 | -8.615850e-47 |
| Msa0267230 | Msa1165010 | 0.946301 | 5.996967e-105 | -8.615850e-47 |
| Msa0267230 | Msa1214780 | 0.812975 | 3.235233e-51 | -8.615850e-47 |
| Msa0267230 | Msa1265670 | -0.810114 | 1.353756e-50 | -8.615850e-47 |
| Msa0267230 | Msa1300730 | 0.815569 | 8.645739e-52 | -8.615850e-47 |
| Msa0267230 | Msa1304980 | 0.803330 | 3.671160e-49 | -8.615850e-47 |
| Msa0267230 | Msa1393930 | 0.952345 | 2.961067e-110 | -8.615850e-47 |
| Msa0267230 | Msa1412410 | 0.803718 | 3.049037e-49 | -8.615850e-47 |
| Msa0267230 | Msa1427860 | 0.807646 | 4.565948e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267230 | MtrunA17_Chr7g0273151 | 82.164 | 342 | 38 | 5 | 1 | 330 | 1 | 331 | 0.0 | 543 |
| Msa0267230 | MtrunA17_Chr7g0273161 | 96.400 | 250 | 9 | 0 | 325 | 574 | 3 | 252 | 3.67e-177 | 500 |
| Msa0267230 | MtrunA17_Chr7g0273131 | 67.704 | 257 | 83 | 0 | 64 | 320 | 55 | 311 | 5.11e-119 | 355 |
| Msa0267230 | MtrunA17_Chr7g0273141 | 79.213 | 178 | 37 | 0 | 357 | 534 | 5 | 182 | 3.74e-104 | 311 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267230 | AT5G27380.1 | 67.343 | 493 | 140 | 2 | 81 | 573 | 67 | 538 | 0.0 | 711 |
Find 138 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTGGTACTTATTTA+AGG | 0.124901 | 2_2:-68716265 | Msa0267230:intron |
| CTTGTAGAATTTCTCCTTCT+TGG | 0.158760 | 2_2:+68718581 | None:intergenic |
| GTCTCAGAACTTGGGATATT+TGG | 0.168043 | 2_2:-68716278 | Msa0267230:CDS |
| GCTTGCTTCCATTTACTTTC+TGG | 0.184316 | 2_2:+68719947 | None:intergenic |
| GCTGCTGCTGCTTCTGCTTT+TGG | 0.210658 | 2_2:-68720695 | Msa0267230:CDS |
| ACACCTGCCATCACCATTAA+TGG | 0.245975 | 2_2:-68720521 | Msa0267230:CDS |
| TAGAGCACCTCTAACTTATC+TGG | 0.247256 | 2_2:-68716015 | Msa0267230:three_prime_UTR |
| AAGTTCCTGTTGAATCTTCT+TGG | 0.247926 | 2_2:+68717689 | None:intergenic |
| TAGCCAAGGCCTCGGCATTC+TGG | 0.248762 | 2_2:+68719017 | None:intergenic |
| CGTCATTTCCAGAAAGTAAA+TGG | 0.257725 | 2_2:-68719955 | Msa0267230:CDS |
| AAAACTGCAGCAGAAGTATT+TGG | 0.268628 | 2_2:+68716335 | None:intergenic |
| CTTTGCAGGACTCTGGAGTT+TGG | 0.274155 | 2_2:-68716622 | Msa0267230:CDS |
| ATTCTGGCTGACAGCATTAT+TGG | 0.283845 | 2_2:+68719033 | None:intergenic |
| AGCTTATGATGCTCTTGTTT+GGG | 0.286202 | 2_2:-68720405 | Msa0267230:CDS |
| CTCTATTTGCAAAAGGGATT+TGG | 0.292630 | 2_2:+68719373 | None:intergenic |
| TATCATTATGATTGTGGTTC+AGG | 0.293008 | 2_2:-68718874 | Msa0267230:CDS |
| AGGAGAAGGAGGAATGTATT+TGG | 0.308769 | 2_2:+68720640 | None:intergenic |
| GACTTGAATTTGCAGGAATA+AGG | 0.309020 | 2_2:-68716156 | Msa0267230:intron |
| CAGTTGCAGTCATTTACTTC+AGG | 0.313042 | 2_2:-68718433 | Msa0267230:CDS |
| GGCTTCATTACAAATAATTC+AGG | 0.320071 | 2_2:+68716564 | None:intergenic |
| ACAGGAGGCTCAAATGATAA+TGG | 0.320779 | 2_2:+68715966 | None:intergenic |
| CCCTTCAATATCGTATCATT+TGG | 0.320965 | 2_2:-68717718 | Msa0267230:CDS |
| CCATGGAAAATTGCTTGGTC+TGG | 0.322664 | 2_2:-68719074 | Msa0267230:CDS |
| TAGTACCTCCTCCTTCTCTC+TGG | 0.326878 | 2_2:+68716541 | None:intergenic |
| ACTATTTCATCTTCATTTGC+TGG | 0.337912 | 2_2:-68719344 | Msa0267230:CDS |
| TAGCTTATGATGCTCTTGTT+TGG | 0.342114 | 2_2:-68720406 | Msa0267230:CDS |
| AACTTAATAGGAAATAAGAT+TGG | 0.357115 | 2_2:-68719432 | Msa0267230:intron |
| TCTTTCCAATTACAGAAATC+AGG | 0.362565 | 2_2:-68720028 | Msa0267230:intron |
| CTTGTTTGGGCCTCTCTTCA+CGG | 0.363437 | 2_2:-68720392 | Msa0267230:CDS |
| AAAATGCGTGAATGCTTTGC+AGG | 0.374193 | 2_2:-68716636 | Msa0267230:CDS |
| GTTGACCGTGTTAGTTTAGA+TGG | 0.384757 | 2_2:-68719893 | Msa0267230:CDS |
| CTCTCTTCACGGTCTCCTCA+TGG | 0.391323 | 2_2:-68720381 | Msa0267230:CDS |
| ATGGAAGCAAGCTTCTGATT+TGG | 0.394917 | 2_2:-68719936 | Msa0267230:CDS |
| CAGCCAGAATGCCGAGGCCT+TGG | 0.406436 | 2_2:-68719020 | Msa0267230:CDS |
| GACCACGCCGTCTCAGAACT+TGG | 0.416285 | 2_2:-68716287 | Msa0267230:CDS |
| CGATACGATGTTGAAGCAAT+AGG | 0.419718 | 2_2:-68720722 | Msa0267230:five_prime_UTR |
| CAGAAATCAGGAATGGTTCC+TGG | 0.422349 | 2_2:-68720016 | Msa0267230:CDS |
| TTTGTTGAGCTGTAGCATCT+TGG | 0.432576 | 2_2:+68719614 | None:intergenic |
| TGTTGAGCTCTATTTGCAAA+AGG | 0.432901 | 2_2:+68719366 | None:intergenic |
| CTCATAAAATTGCAGAAAAC+GGG | 0.433571 | 2_2:-68716401 | Msa0267230:CDS |
| CAGGAGGCTCAAATGATAAT+GGG | 0.436248 | 2_2:+68715967 | None:intergenic |
| CCTCATAAAATTGCAGAAAA+CGG | 0.438181 | 2_2:-68716402 | Msa0267230:CDS |
| TCAACAAGTTCATTGAATAT+AGG | 0.442386 | 2_2:+68719911 | None:intergenic |
| AGTACCTCCTCCTTCTCTCT+GGG | 0.443480 | 2_2:+68716542 | None:intergenic |
| ACTTAATAGGAAATAAGATT+GGG | 0.446606 | 2_2:-68719431 | Msa0267230:intron |
| TACTTTCTGGAAATGACGTT+GGG | 0.448557 | 2_2:+68719960 | None:intergenic |
| AATATACCCAGATAAGTTAG+AGG | 0.449017 | 2_2:+68716008 | None:intergenic |
| TACAAGGTAAAGATAGAAGA+AGG | 0.451074 | 2_2:+68720600 | None:intergenic |
| TCAATATCGTATCATTTGGT+TGG | 0.454140 | 2_2:-68717714 | Msa0267230:CDS |
| GCTTGGTCTGGATTCAGAAA+AGG | 0.454195 | 2_2:-68719062 | Msa0267230:CDS |
| TGATGATGATGAGACATTAG+AGG | 0.456067 | 2_2:+68720557 | None:intergenic |
| TCTTGCCATGGAAAATTGCT+TGG | 0.461118 | 2_2:-68719079 | Msa0267230:CDS |
| GACGAAGGTGGGGTTGCAGC+TGG | 0.464192 | 2_2:-68716074 | Msa0267230:CDS |
| TGGACAAAGGTATTATTGTC+TGG | 0.469663 | 2_2:+68720660 | None:intergenic |
| GATTCTGAAGGATAATCAAC+TGG | 0.471685 | 2_2:+68718398 | None:intergenic |
| GTTGAGCTCTATTTGCAAAA+GGG | 0.477698 | 2_2:+68719367 | None:intergenic |
| GACGTTGGGAATAATGCAAA+CGG | 0.479910 | 2_2:+68719974 | None:intergenic |
| AGAGGCAGACAAATATAAAC+AGG | 0.483894 | 2_2:+68715948 | None:intergenic |
| AGTTTATAACTACGGTGATA+AGG | 0.484715 | 2_2:+68718792 | None:intergenic |
| ACGTTGGGAATAATGCAAAC+GGG | 0.485054 | 2_2:+68719975 | None:intergenic |
| GAATTTGCAGGAATAAGGAT+AGG | 0.485387 | 2_2:-68716151 | Msa0267230:intron |
| GAAGGAGAAATTCTACAAGA+TGG | 0.488802 | 2_2:-68718577 | Msa0267230:CDS |
| CATGGGAGATAAATCTTACC+AGG | 0.493452 | 2_2:-68720363 | Msa0267230:intron |
| CTCTTGTCACTCAACTTCAT+AGG | 0.498422 | 2_2:-68719313 | Msa0267230:intron |
| AGTTGCAGTCATTTACTTCA+GGG | 0.502680 | 2_2:-68718432 | Msa0267230:CDS |
| CCGAGGCCTTGGCTAAAGCT+TGG | 0.504909 | 2_2:-68719009 | Msa0267230:CDS |
| GCGAATAGAGGAGGAGGAGG+AGG | 0.507685 | 2_2:+68720470 | None:intergenic |
| CTATTGTAAGTTTATAACTA+CGG | 0.508138 | 2_2:+68718784 | None:intergenic |
| AGGTACATACTTTCTTGCCA+TGG | 0.512977 | 2_2:-68719091 | Msa0267230:CDS |
| GCAGTCATTTACTTCAGGGC+TGG | 0.514362 | 2_2:-68718428 | Msa0267230:CDS |
| AGTATTGATCAACAACTTCT+CGG | 0.516257 | 2_2:-68720434 | Msa0267230:CDS |
| TCTCTTCACGGTCTCCTCAT+GGG | 0.517899 | 2_2:-68720380 | Msa0267230:CDS |
| TTCATCGCCATTAATGGTGA+TGG | 0.520509 | 2_2:+68720514 | None:intergenic |
| CCAATTACAGAAATCAGGAA+TGG | 0.520677 | 2_2:-68720023 | Msa0267230:intron |
| TATTTATGGTGAAGCAGTGC+GGG | 0.520781 | 2_2:-68716429 | Msa0267230:CDS |
| CAGGGCTATCATTATGATTG+TGG | 0.521933 | 2_2:-68718880 | Msa0267230:CDS |
| ACCAAATGATACGATATTGA+AGG | 0.522355 | 2_2:+68717717 | None:intergenic |
| TATCATCATCTGACGAAGGT+GGG | 0.522364 | 2_2:-68716085 | Msa0267230:CDS |
| TGGCTGACAGCATTATTGGC+AGG | 0.526065 | 2_2:+68719037 | None:intergenic |
| TGGCACCAAGAAGATTCAAC+AGG | 0.526530 | 2_2:-68717694 | Msa0267230:CDS |
| GTGAATGCTTTGCAGGACTC+TGG | 0.531632 | 2_2:-68716629 | Msa0267230:CDS |
| AATTTGCAGGAATAAGGATA+GGG | 0.531981 | 2_2:-68716150 | Msa0267230:intron |
| ATCAGGAATGGTTCCTGGTG+TGG | 0.532782 | 2_2:-68720011 | Msa0267230:CDS |
| CAACAGGAACTTGCAAAGCC+AGG | 0.536479 | 2_2:-68717678 | Msa0267230:CDS |
| TGATAATCATCAGCGAATAG+AGG | 0.539988 | 2_2:+68720458 | None:intergenic |
| CCAAGCTTTAGCCAAGGCCT+CGG | 0.543942 | 2_2:+68719009 | None:intergenic |
| TCCTTAGCTTTGAACACGCA+TGG | 0.547326 | 2_2:-68718640 | Msa0267230:CDS |
| TCAGCGAATAGAGGAGGAGG+AGG | 0.548874 | 2_2:+68720467 | None:intergenic |
| ATATGCAGGAATGGAGAGCT+AGG | 0.552197 | 2_2:-68717773 | Msa0267230:intron |
| CAAAGCCAGGTGTTCTTGAG+AGG | 0.552723 | 2_2:-68717665 | Msa0267230:intron |
| TCAGGAATGGTTCCTGGTGT+GGG | 0.557885 | 2_2:-68720010 | Msa0267230:CDS |
| GTAATGAAGCCCCAGAGAGA+AGG | 0.558389 | 2_2:-68716552 | Msa0267230:CDS |
| ATGAAGCCCCAGAGAGAAGG+AGG | 0.563223 | 2_2:-68716549 | Msa0267230:CDS |
| ACCATGCGTGTTCAAAGCTA+AGG | 0.563501 | 2_2:+68718639 | None:intergenic |
| TTACTTTCTGGAAATGACGT+TGG | 0.567133 | 2_2:+68719959 | None:intergenic |
| TTCTTCAAGAATCTCTCTCA+AGG | 0.567231 | 2_2:-68719865 | Msa0267230:intron |
| ATGGAGAGCTAGGCTACTGA+TGG | 0.569626 | 2_2:-68717763 | Msa0267230:CDS |
| TCATCAGCGAATAGAGGAGG+AGG | 0.570573 | 2_2:+68720464 | None:intergenic |
| GAACAGCAGAAAGAAAATGC+TGG | 0.573205 | 2_2:+68718829 | None:intergenic |
| ATCATCATCTGACGAAGGTG+GGG | 0.576564 | 2_2:-68716084 | Msa0267230:CDS |
| TGGCCACTTACTGATTCTGA+AGG | 0.580546 | 2_2:+68718386 | None:intergenic |
| AGAGCACCTCTAACTTATCT+GGG | 0.583038 | 2_2:-68716014 | Msa0267230:three_prime_UTR |
| TCAATCCAGAACTAAGCAAG+TGG | 0.583274 | 2_2:-68719670 | Msa0267230:intron |
| CCAAATGATACGATATTGAA+GGG | 0.583942 | 2_2:+68717718 | None:intergenic |
| GGAGGAATGTATTTGGACAA+AGG | 0.587129 | 2_2:+68720647 | None:intergenic |
| TCGCCATTAATGGTGATGGC+AGG | 0.589219 | 2_2:+68720518 | None:intergenic |
| ATGAATATCTAAAAGTCTAG+AGG | 0.596316 | 2_2:+68719638 | None:intergenic |
| TACAATTGTTCGCAAAACGA+TGG | 0.597280 | 2_2:-68718614 | Msa0267230:CDS |
| GTCGTCGAGAAATTTATACA+AGG | 0.599831 | 2_2:+68720584 | None:intergenic |
| CGATGTTGAAGCAATAGGCA+TGG | 0.604299 | 2_2:-68720717 | Msa0267230:exon |
| ATATCATCATCTGACGAAGG+TGG | 0.604927 | 2_2:-68716086 | Msa0267230:CDS |
| TGTAACTATACAACACACCA+TGG | 0.605619 | 2_2:+68715878 | None:intergenic |
| GCATGCATCAATCCCACACC+AGG | 0.606616 | 2_2:+68719998 | None:intergenic |
| AGATACCTCTCAAGAACACC+TGG | 0.608405 | 2_2:+68717660 | None:intergenic |
| ATGGCAGAAGTTGACCAAGA+AGG | 0.613185 | 2_2:-68718595 | Msa0267230:CDS |
| ACCACGCCGTCTCAGAACTT+GGG | 0.613931 | 2_2:-68716286 | Msa0267230:CDS |
| CATGAGGAGACCGTGAAGAG+AGG | 0.614477 | 2_2:+68720382 | None:intergenic |
| ACTCTGGAGTTTGGATGACT+CGG | 0.619132 | 2_2:-68716613 | Msa0267230:CDS |
| AAGCCCCAGAGAGAAGGAGG+AGG | 0.623964 | 2_2:-68716546 | Msa0267230:intron |
| AAATATCCCAAGTTCTGAGA+CGG | 0.625935 | 2_2:+68716280 | None:intergenic |
| GGAGTGAGTATAATAACCCC+AGG | 0.633676 | 2_2:-68718988 | Msa0267230:intron |
| CTCACTCCAAGCTTTAGCCA+AGG | 0.636780 | 2_2:+68719003 | None:intergenic |
| TGCTGTCAGCCAGAATGCCG+AGG | 0.640820 | 2_2:-68719026 | Msa0267230:CDS |
| GCGTAATGGTTGTTGGCACA+AGG | 0.648992 | 2_2:-68716309 | Msa0267230:CDS |
| CAGCTTACATACTTATGCAG+AGG | 0.649813 | 2_2:-68716364 | Msa0267230:CDS |
| CGTTGGGAATAATGCAAACG+GGG | 0.650289 | 2_2:+68719976 | None:intergenic |
| GTACCTCCTCCTTCTCTCTG+GGG | 0.656439 | 2_2:+68716543 | None:intergenic |
| TCCCAAGTTCTGAGACGGCG+TGG | 0.660655 | 2_2:+68716285 | None:intergenic |
| AAAATATCATCATCTGACGA+AGG | 0.662845 | 2_2:-68716089 | Msa0267230:CDS |
| GGCAGACAAATATAAACAGG+AGG | 0.666515 | 2_2:+68715951 | None:intergenic |
| TAATCATCAGCGAATAGAGG+AGG | 0.667692 | 2_2:+68720461 | None:intergenic |
| GTTGTCGTGAATAATCAAAG+TGG | 0.670695 | 2_2:-68716128 | Msa0267230:CDS |
| GTAACTATACAACACACCAT+GGG | 0.672655 | 2_2:+68715879 | None:intergenic |
| GAGGTGCTCTACATCAAGTG+AGG | 0.688457 | 2_2:+68716027 | None:intergenic |
| ATATTTATGGTGAAGCAGTG+CGG | 0.689917 | 2_2:-68716430 | Msa0267230:CDS |
| ATTCACCATCTAAACTAACA+CGG | 0.698126 | 2_2:+68719888 | None:intergenic |
| GGTAAGATTTATCTCCCATG+AGG | 0.699020 | 2_2:+68720366 | None:intergenic |
| ATAACGTAAAATAAACAACG+TGG | 0.837611 | 2_2:+68715902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTTTTTTTTTATAAAG+TGG | - | chr2_2:68717069-68717088 | Msa0267230:intron | 10.0% |
| !!! | TTTATATTTTAAACATATTC+TGG | - | chr2_2:68717894-68717913 | Msa0267230:intron | 10.0% |
| !!! | AAATACAAATCAATATATTT+TGG | + | chr2_2:68719818-68719837 | None:intergenic | 10.0% |
| !! | TCAACAAATAATATAACTTA+TGG | + | chr2_2:68718522-68718541 | None:intergenic | 15.0% |
| !!! | AAGTTATATTATTTGTTGAT+TGG | - | chr2_2:68718523-68718542 | Msa0267230:intron | 15.0% |
| !! | GTTTAAATATTTATCTTATC+CGG | - | chr2_2:68719550-68719569 | Msa0267230:intron | 15.0% |
| !! | AAATGAAAATAAGAAGAAGA+AGG | + | chr2_2:68716243-68716262 | None:intergenic | 20.0% |
| !! | CATAGTAATTTACAAAATCA+CGG | - | chr2_2:68716364-68716383 | Msa0267230:CDS | 20.0% |
| !! | ATTTGAGCTGTAAATAAATT+AGG | - | chr2_2:68716477-68716496 | Msa0267230:intron | 20.0% |
| !! | TTTAAAAATATGAACAAGCA+AGG | - | chr2_2:68716500-68716519 | Msa0267230:intron | 20.0% |
| !!! | TTTTTTATAAAGTGGATCAA+AGG | - | chr2_2:68717077-68717096 | Msa0267230:intron | 20.0% |
| !!! | TGATATATTACTTTTACTGT+TGG | - | chr2_2:68717107-68717126 | Msa0267230:intron | 20.0% |
| !! | AACTTAATAGGAAATAAGAT+TGG | - | chr2_2:68717139-68717158 | Msa0267230:intron | 20.0% |
| !! | ACTTAATAGGAAATAAGATT+GGG | - | chr2_2:68717140-68717159 | Msa0267230:intron | 20.0% |
| !! | CTATTGTAAGTTTATAACTA+CGG | + | chr2_2:68717790-68717809 | None:intergenic | 20.0% |
| !! | AAAGTGTAGTTTATCATATA+AGG | - | chr2_2:68717860-68717879 | Msa0267230:intron | 20.0% |
| !!! | CAATTTTTTTACTGTAGTAA+AGG | - | chr2_2:68718110-68718129 | Msa0267230:intron | 20.0% |
| !!! | TATATTATTTGTTGATTGGT+CGG | - | chr2_2:68718527-68718546 | Msa0267230:intron | 20.0% |
| !! | TAATCTAACGGTAAAAAAAA+AGG | + | chr2_2:68718603-68718622 | None:intergenic | 20.0% |
| !! | GTTTGAAAAAAGTAATCTAA+CGG | + | chr2_2:68718615-68718634 | None:intergenic | 20.0% |
| !! | CATGATTAATCAAATAAGTA+AGG | + | chr2_2:68719104-68719123 | None:intergenic | 20.0% |
| !! | CTTACTTATTTGATTAATCA+TGG | - | chr2_2:68719102-68719121 | Msa0267230:intron | 20.0% |
| !! | TATTTGATTAATCATGGATA+TGG | - | chr2_2:68719108-68719127 | Msa0267230:intron | 20.0% |
| !! | AACAAGATATGAAAAAGATA+TGG | + | chr2_2:68719200-68719219 | None:intergenic | 20.0% |
| !!! | AATTTTGGAAGAAAAATTGA+AGG | + | chr2_2:68719594-68719613 | None:intergenic | 20.0% |
| !! | GAAAAAAAAGCAAAATAAGA+AGG | - | chr2_2:68719628-68719647 | Msa0267230:CDS | 20.0% |
| !!! | GAAGGAAAAAAAAATCATTT+TGG | - | chr2_2:68719646-68719665 | Msa0267230:CDS | 20.0% |
| !!! | AAAAAATCATTTTGGATGAT+CGG | - | chr2_2:68719654-68719673 | Msa0267230:CDS | 20.0% |
| !!! | AATATAATTTTCAACAGAGT+TGG | + | chr2_2:68720091-68720110 | None:intergenic | 20.0% |
| !!! | ATGATCTGTAATTATTTTTC+AGG | - | chr2_2:68720113-68720132 | Msa0267230:intron | 20.0% |
| !!! | TTTTCAGGAAACAATATTTA+TGG | - | chr2_2:68720128-68720147 | Msa0267230:intron | 20.0% |
| ! | GCTTAGTAAAAATGAGTTTA+TGG | + | chr2_2:68716300-68716319 | None:intergenic | 25.0% |
| ! | AAACTCATTGTAAAACCAAA+CGG | + | chr2_2:68716336-68716355 | None:intergenic | 25.0% |
| ! | TCAACAAGTTCATTGAATAT+AGG | + | chr2_2:68716663-68716682 | None:intergenic | 25.0% |
| ! | TATTCTTATTCATTGTCAAG+TGG | - | chr2_2:68716768-68716787 | Msa0267230:intron | 25.0% |
| ! | ATTCTTATTCATTGTCAAGT+GGG | - | chr2_2:68716769-68716788 | Msa0267230:intron | 25.0% |
| ! | TGACAATTAAAAGCTGAAAA+TGG | + | chr2_2:68716856-68716875 | None:intergenic | 25.0% |
| ! | ATGAATATCTAAAAGTCTAG+AGG | + | chr2_2:68716936-68716955 | None:intergenic | 25.0% |
| !! | TGGCATCAATTTAACTTAAT+AGG | - | chr2_2:68717127-68717146 | Msa0267230:intron | 25.0% |
| ! | GAAGTGAAACAAATATCTAA+AGG | + | chr2_2:68717342-68717361 | None:intergenic | 25.0% |
| !! | GAAAAAGGATATTTGTTTCT+CGG | + | chr2_2:68717615-68717634 | None:intergenic | 25.0% |
| ! | AGAATAAAGTGAACTGAAAA+AGG | + | chr2_2:68717630-68717649 | None:intergenic | 25.0% |
| !! | CTTTATTCTACTGCTAATTT+TGG | - | chr2_2:68717641-68717660 | Msa0267230:intron | 25.0% |
| ! | TGGAATCATTCAGAAATATA+AGG | + | chr2_2:68717669-68717688 | None:intergenic | 25.0% |
| ! | ACAAGCAAGAAAAAATAAAC+TGG | + | chr2_2:68718208-68718227 | None:intergenic | 25.0% |
| ! | AACTCATTATCTGAAAGATT+AGG | - | chr2_2:68718281-68718300 | Msa0267230:intron | 25.0% |
| ! | ATTATCTGAAAGATTAGGAA+AGG | - | chr2_2:68718286-68718305 | Msa0267230:intron | 25.0% |
| ! | AAACCAACAGAACAAAAATA+AGG | + | chr2_2:68718398-68718417 | None:intergenic | 25.0% |
| ! | GGAAGTTATTTATCTTCAAA+AGG | + | chr2_2:68718473-68718492 | None:intergenic | 25.0% |
| ! | AAGATAAATAACTTCCAGTT+TGG | - | chr2_2:68718477-68718496 | Msa0267230:intron | 25.0% |
| ! | ACAATAACTGAAAAAAAGCA+AGG | + | chr2_2:68718961-68718980 | None:intergenic | 25.0% |
| ! | TTAATCAAATAAGTAAGGCA+TGG | + | chr2_2:68719099-68719118 | None:intergenic | 25.0% |
| !! | AAATTGAAGGTACAAGAAAA+GGG | + | chr2_2:68719581-68719600 | None:intergenic | 25.0% |
| !! | AAAATTGAAGGTACAAGAAA+AGG | + | chr2_2:68719582-68719601 | None:intergenic | 25.0% |
| ! | ATACTTCCTATTATGGTTAT+AGG | - | chr2_2:68719710-68719729 | Msa0267230:intron | 25.0% |
| ! | GTAATTCCTATAACCATAAT+AGG | + | chr2_2:68719719-68719738 | None:intergenic | 25.0% |
| ! | GGATATTTGGTACTTATTTA+AGG | - | chr2_2:68720306-68720325 | Msa0267230:intron | 25.0% |
| ! | TCTGCAAAAAATTGAAAGAA+GGG | - | chr2_2:68720643-68720662 | Msa0267230:CDS | 25.0% |
| ! | ATAACGTAAAATAAACAACG+TGG | + | chr2_2:68720672-68720691 | None:intergenic | 25.0% |
| TACAAGGTAAAGATAGAAGA+AGG | + | chr2_2:68715974-68715993 | None:intergenic | 30.0% | |
| !! | AGTATTGATCAACAACTTCT+CGG | - | chr2_2:68716137-68716156 | Msa0267230:CDS | 30.0% |
| TCTTTCCAATTACAGAAATC+AGG | - | chr2_2:68716543-68716562 | Msa0267230:intron | 30.0% | |
| ATTCACCATCTAAACTAACA+CGG | + | chr2_2:68716686-68716705 | None:intergenic | 30.0% | |
| AGTGAAGTGAATTAGTAGAA+CGG | + | chr2_2:68716733-68716752 | None:intergenic | 30.0% | |
| ATGGAAAAGACGTAGAAAAA+AGG | + | chr2_2:68716837-68716856 | None:intergenic | 30.0% | |
| TATGTAGCGTTATTGTGAAA+AGG | + | chr2_2:68717043-68717062 | None:intergenic | 30.0% | |
| ACTATTTCATCTTCATTTGC+TGG | - | chr2_2:68717227-68717246 | Msa0267230:intron | 30.0% | |
| !! | AAATTCTGAGGTGAAACATA+GGG | + | chr2_2:68717426-68717445 | None:intergenic | 30.0% |
| !! | AAAATTCTGAGGTGAAACAT+AGG | + | chr2_2:68717427-68717446 | None:intergenic | 30.0% |
| ! | TTTTTCTGACCCAATTGTTT+CGG | - | chr2_2:68717444-68717463 | Msa0267230:intron | 30.0% |
| AATCACAAACCGAAACAATT+GGG | + | chr2_2:68717456-68717475 | None:intergenic | 30.0% | |
| AAATCACAAACCGAAACAAT+TGG | + | chr2_2:68717457-68717476 | None:intergenic | 30.0% | |
| ATTTCTGAATGATTCCATAC+AGG | - | chr2_2:68717672-68717691 | Msa0267230:CDS | 30.0% | |
| TTTCTGAATGATTCCATACA+GGG | - | chr2_2:68717673-68717692 | Msa0267230:CDS | 30.0% | |
| TATCATTATGATTGTGGTTC+AGG | - | chr2_2:68717697-68717716 | Msa0267230:CDS | 30.0% | |
| AGTTTATAACTACGGTGATA+AGG | + | chr2_2:68717782-68717801 | None:intergenic | 30.0% | |
| TAAAGAAAGTCAGTTTCTGA+TGG | + | chr2_2:68718047-68718066 | None:intergenic | 30.0% | |
| ! | ACTGACTTTCTTTAAGTTTG+TGG | - | chr2_2:68718053-68718072 | Msa0267230:intron | 30.0% |
| !! | AAAAGGTGTTCAATACTTGT+AGG | + | chr2_2:68718456-68718475 | None:intergenic | 30.0% |
| ! | TATGGAACTCAACTATTTTG+AGG | + | chr2_2:68718504-68718523 | None:intergenic | 30.0% |
| ACCTCAATCTTTCTATTCTA+TGG | - | chr2_2:68718657-68718676 | Msa0267230:intron | 30.0% | |
| TCCATAGAATAGAAAGATTG+AGG | + | chr2_2:68718661-68718680 | None:intergenic | 30.0% | |
| CCAAATGATACGATATTGAA+GGG | + | chr2_2:68718856-68718875 | None:intergenic | 30.0% | |
| ACCAAATGATACGATATTGA+AGG | + | chr2_2:68718857-68718876 | None:intergenic | 30.0% | |
| TCAATATCGTATCATTTGGT+TGG | - | chr2_2:68718857-68718876 | Msa0267230:CDS | 30.0% | |
| CCAACCAATCAAATCATAAA+TGG | + | chr2_2:68719143-68719162 | None:intergenic | 30.0% | |
| CCATTTATGATTTGATTGGT+TGG | - | chr2_2:68719140-68719159 | Msa0267230:intron | 30.0% | |
| TGCATCGTTAATAACTGAAA+CGG | - | chr2_2:68719280-68719299 | Msa0267230:intron | 30.0% | |
| TCATAAGAATGAATTCAACG+CGG | - | chr2_2:68719380-68719399 | Msa0267230:CDS | 30.0% | |
| !! | GTTTTGATGTTAGAGAAAAC+TGG | - | chr2_2:68719402-68719421 | Msa0267230:CDS | 30.0% |
| ! | CGTTAAATCATGATTAGTTG+CGG | + | chr2_2:68719428-68719447 | None:intergenic | 30.0% |
| CGCAACTAATCATGATTTAA+CGG | - | chr2_2:68719426-68719445 | Msa0267230:intron | 30.0% | |
| GCAACTAATCATGATTTAAC+GGG | - | chr2_2:68719427-68719446 | Msa0267230:intron | 30.0% | |
| ! | AATTGAAGGTACAAGAAAAG+GGG | + | chr2_2:68719580-68719599 | None:intergenic | 30.0% |
| ! | CAAGACAGAACAAGTAATTT+TGG | + | chr2_2:68719609-68719628 | None:intergenic | 30.0% |
| TGTAAATGAATATGTTCCCT+TGG | - | chr2_2:68719677-68719696 | Msa0267230:intron | 30.0% | |
| TACACTCATACTTCCTATTA+TGG | - | chr2_2:68719703-68719722 | Msa0267230:intron | 30.0% | |
| !!! | CAGTTTTGATTCAAGGATTT+AGG | + | chr2_2:68719880-68719899 | None:intergenic | 30.0% |
| GGCTTCATTACAAATAATTC+AGG | + | chr2_2:68720010-68720029 | None:intergenic | 30.0% | |
| ! | AAAGTTAGATCACGTTTTAG+GGG | + | chr2_2:68720059-68720078 | None:intergenic | 30.0% |
| ! | GAAAGTTAGATCACGTTTTA+GGG | + | chr2_2:68720060-68720079 | None:intergenic | 30.0% |
| ! | AGAAAGTTAGATCACGTTTT+AGG | + | chr2_2:68720061-68720080 | None:intergenic | 30.0% |
| ! | CGTTTTCTGCAATTTTATGA+GGG | + | chr2_2:68720171-68720190 | None:intergenic | 30.0% |
| CCTCATAAAATTGCAGAAAA+CGG | - | chr2_2:68720169-68720188 | Msa0267230:intron | 30.0% | |
| CTCATAAAATTGCAGAAAAC+GGG | - | chr2_2:68720170-68720189 | Msa0267230:intron | 30.0% | |
| GACTATATATCTCTATAGCT+CGG | - | chr2_2:68720339-68720358 | Msa0267230:intron | 30.0% | |
| AATTTGCAGGAATAAGGATA+GGG | - | chr2_2:68720421-68720440 | Msa0267230:CDS | 30.0% | |
| AAAATATCATCATCTGACGA+AGG | - | chr2_2:68720482-68720501 | Msa0267230:CDS | 30.0% | |
| AATATACCCAGATAAGTTAG+AGG | + | chr2_2:68720566-68720585 | None:intergenic | 30.0% | |
| !!! | CTTCTTTCAATTTTTTGCAG+AGG | + | chr2_2:68720644-68720663 | None:intergenic | 30.0% |
| CTCTGCAAAAAATTGAAAGA+AGG | - | chr2_2:68720642-68720661 | Msa0267230:CDS | 30.0% | |
| !!! | GTTTATTTTACGTTATCCCA+TGG | - | chr2_2:68720676-68720695 | Msa0267230:CDS | 30.0% |
| !! | TTTGAGCAAAAAGCATTAAC+AGG | + | chr2_2:68720728-68720747 | None:intergenic | 30.0% |
| !! | TGGACAAAGGTATTATTGTC+TGG | + | chr2_2:68715914-68715933 | None:intergenic | 35.0% |
| !!! | AGAAGGTTGTTGTTTTTGTG+AGG | + | chr2_2:68715957-68715976 | None:intergenic | 35.0% |
| GTCGTCGAGAAATTTATACA+AGG | + | chr2_2:68715990-68716009 | None:intergenic | 35.0% | |
| ! | TGATGATGATGAGACATTAG+AGG | + | chr2_2:68716017-68716036 | None:intergenic | 35.0% |
| !! | GTTTTGTTCATCGCCATTAA+TGG | + | chr2_2:68716066-68716085 | None:intergenic | 35.0% |
| TGATAATCATCAGCGAATAG+AGG | + | chr2_2:68716116-68716135 | None:intergenic | 35.0% | |
| TAGCTTATGATGCTCTTGTT+TGG | - | chr2_2:68716165-68716184 | Msa0267230:intron | 35.0% | |
| ! | AGCTTATGATGCTCTTGTTT+GGG | - | chr2_2:68716166-68716185 | Msa0267230:intron | 35.0% |
| ATTGTAAAACCAAACGGTGA+TGG | + | chr2_2:68716330-68716349 | None:intergenic | 35.0% | |
| TGGAATTAAGCATGCATGTT+TGG | - | chr2_2:68716450-68716469 | Msa0267230:intron | 35.0% | |
| CCATTCCTGATTTCTGTAAT+TGG | + | chr2_2:68716551-68716570 | None:intergenic | 35.0% | |
| CCAATTACAGAAATCAGGAA+TGG | - | chr2_2:68716548-68716567 | Msa0267230:CDS | 35.0% | |
| ! | TACTTTCTGGAAATGACGTT+GGG | + | chr2_2:68716614-68716633 | None:intergenic | 35.0% |
| ! | TTACTTTCTGGAAATGACGT+TGG | + | chr2_2:68716615-68716634 | None:intergenic | 35.0% |
| CGTCATTTCCAGAAAGTAAA+TGG | - | chr2_2:68716616-68716635 | Msa0267230:CDS | 35.0% | |
| TTCTTCAAGAATCTCTCTCA+AGG | - | chr2_2:68716706-68716725 | Msa0267230:intron | 35.0% | |
| CCAAACCAAACAAACGAAAA+GGG | + | chr2_2:68716798-68716817 | None:intergenic | 35.0% | |
| ACCAAACCAAACAAACGAAA+AGG | + | chr2_2:68716799-68716818 | None:intergenic | 35.0% | |
| ! | GGTAGCTATATTGGTTAAAG+TGG | - | chr2_2:68716989-68717008 | Msa0267230:intron | 35.0% |
| CTCTATTTGCAAAAGGGATT+TGG | + | chr2_2:68717201-68717220 | None:intergenic | 35.0% | |
| GTTGAGCTCTATTTGCAAAA+GGG | + | chr2_2:68717207-68717226 | None:intergenic | 35.0% | |
| TGTTGAGCTCTATTTGCAAA+AGG | + | chr2_2:68717208-68717227 | None:intergenic | 35.0% | |
| GCAAAAGAGATGAAAAACAG+AGG | + | chr2_2:68717401-68717420 | None:intergenic | 35.0% | |
| TTGGGTCAGAAAAAATTCTG+AGG | + | chr2_2:68717438-68717457 | None:intergenic | 35.0% | |
| !! | GTTTCGGTTTGTGATTTTTC+AGG | - | chr2_2:68717460-68717479 | Msa0267230:intron | 35.0% |
| ATCATAATGATAGCCCTGTA+TGG | + | chr2_2:68717689-68717708 | None:intergenic | 35.0% | |
| CTACCAAATGTGATATCAGA+GGG | - | chr2_2:68717834-68717853 | Msa0267230:intron | 35.0% | |
| ATACCCTCTGATATCACATT+TGG | + | chr2_2:68717840-68717859 | None:intergenic | 35.0% | |
| TACAATTGTTCGCAAAACGA+TGG | - | chr2_2:68717957-68717976 | Msa0267230:intron | 35.0% | |
| CTTGTAGAATTTCTCCTTCT+TGG | + | chr2_2:68717993-68718012 | None:intergenic | 35.0% | |
| GAAGGAGAAATTCTACAAGA+TGG | - | chr2_2:68717994-68718013 | Msa0267230:intron | 35.0% | |
| AGTTGCAGTCATTTACTTCA+GGG | - | chr2_2:68718139-68718158 | Msa0267230:intron | 35.0% | |
| ! | GATTCTGAAGGATAATCAAC+TGG | + | chr2_2:68718176-68718195 | None:intergenic | 35.0% |
| TATCCTTCAGAATCAGTAAG+TGG | - | chr2_2:68718182-68718201 | Msa0267230:intron | 35.0% | |
| ATCATACCAGGTAATTCAGT+GGG | + | chr2_2:68718316-68718335 | None:intergenic | 35.0% | |
| CCAACAGAACAAAAATAAGG+TGG | + | chr2_2:68718395-68718414 | None:intergenic | 35.0% | |
| !!! | CCACCTTATTTTTGTTCTGT+TGG | - | chr2_2:68718392-68718411 | Msa0267230:intron | 35.0% |
| !!! | AACTATTTTGAGGTCCAAAC+TGG | + | chr2_2:68718494-68718513 | None:intergenic | 35.0% |
| GAACTCATTGTCAGGATAAA+AGG | + | chr2_2:68718746-68718765 | None:intergenic | 35.0% | |
| GCATAACTTACTCAATATGC+AGG | - | chr2_2:68718784-68718803 | Msa0267230:intron | 35.0% | |
| ACTTACTCAATATGCAGGAA+TGG | - | chr2_2:68718789-68718808 | Msa0267230:CDS | 35.0% | |
| CCCTTCAATATCGTATCATT+TGG | - | chr2_2:68718853-68718872 | Msa0267230:CDS | 35.0% | |
| AAGTTCCTGTTGAATCTTCT+TGG | + | chr2_2:68718885-68718904 | None:intergenic | 35.0% | |
| CAAATAAGTAAGGCATGGAT+TGG | + | chr2_2:68719094-68719113 | None:intergenic | 35.0% | |
| CCAATCAAATCATAAATGGC+TGG | + | chr2_2:68719139-68719158 | None:intergenic | 35.0% | |
| CCAGCCATTTATGATTTGAT+TGG | - | chr2_2:68719136-68719155 | Msa0267230:intron | 35.0% | |
| TCGTTAATAACTGAAACGGA+AGG | - | chr2_2:68719284-68719303 | Msa0267230:intron | 35.0% | |
| AATAACTGAAACGGAAGGTT+TGG | - | chr2_2:68719289-68719308 | Msa0267230:intron | 35.0% | |
| ATTCAAAACTCTTCCTAGAG+AGG | - | chr2_2:68719475-68719494 | Msa0267230:intron | 35.0% | |
| AATTCAACTCAATCCTCTCT+AGG | + | chr2_2:68719491-68719510 | None:intergenic | 35.0% | |
| AAGTATGAGTGTAGTTCCAA+GGG | + | chr2_2:68719696-68719715 | None:intergenic | 35.0% | |
| ! | TTTCTTAGATGAAAGTGCGA+GGG | + | chr2_2:68719794-68719813 | None:intergenic | 35.0% |
| !! | TTTTCTTAGATGAAAGTGCG+AGG | + | chr2_2:68719795-68719814 | None:intergenic | 35.0% |
| !!! | TTGACCATAGTTTGCTTTTC+TGG | - | chr2_2:68719842-68719861 | Msa0267230:intron | 35.0% |
| TTGACCAGAAAAGCAAACTA+TGG | + | chr2_2:68719849-68719868 | None:intergenic | 35.0% | |
| !!! | CTGCTTACAGTTTTGATTCA+AGG | + | chr2_2:68719887-68719906 | None:intergenic | 35.0% |
| CTTGAATCAAAACTGTAAGC+AGG | - | chr2_2:68719885-68719904 | Msa0267230:CDS | 35.0% | |
| !!! | CGATATCGTCTTTGTTTTCA+AGG | + | chr2_2:68719913-68719932 | None:intergenic | 35.0% |
| ATATTTATGGTGAAGCAGTG+CGG | - | chr2_2:68720141-68720160 | Msa0267230:intron | 35.0% | |
| ! | CCGTTTTCTGCAATTTTATG+AGG | + | chr2_2:68720172-68720191 | None:intergenic | 35.0% |
| !! | AAAACTGCAGCAGAAGTATT+TGG | + | chr2_2:68720239-68720258 | None:intergenic | 35.0% |
| ! | TTTTGATGCGTAATGGTTGT+TGG | - | chr2_2:68720255-68720274 | Msa0267230:intron | 35.0% |
| !! | AAATATCCCAAGTTCTGAGA+CGG | + | chr2_2:68720294-68720313 | None:intergenic | 35.0% |
| GACTTGAATTTGCAGGAATA+AGG | - | chr2_2:68720415-68720434 | Msa0267230:CDS | 35.0% | |
| GAATTTGCAGGAATAAGGAT+AGG | - | chr2_2:68720420-68720439 | Msa0267230:CDS | 35.0% | |
| GTTGTCGTGAATAATCAAAG+TGG | - | chr2_2:68720443-68720462 | Msa0267230:CDS | 35.0% | |
| AGAGGCAGACAAATATAAAC+AGG | + | chr2_2:68720626-68720645 | None:intergenic | 35.0% | |
| GCAAAAAATTGAAAGAAGGG+AGG | - | chr2_2:68720646-68720665 | Msa0267230:CDS | 35.0% | |
| GTAACTATACAACACACCAT+GGG | + | chr2_2:68720695-68720714 | None:intergenic | 35.0% | |
| TGTAACTATACAACACACCA+TGG | + | chr2_2:68720696-68720715 | None:intergenic | 35.0% | |
| CGATACGATGTTGAAGCAAT+AGG | - | chr2_2:68715849-68715868 | Msa0267230:three_prime_UTR | 40.0% | |
| GGAGGAATGTATTTGGACAA+AGG | + | chr2_2:68715927-68715946 | None:intergenic | 40.0% | |
| AGGAGAAGGAGGAATGTATT+TGG | + | chr2_2:68715934-68715953 | None:intergenic | 40.0% | |
| !!! | TTGTTTTTGTGAGGAGGAGA+AGG | + | chr2_2:68715948-68715967 | None:intergenic | 40.0% |
| !!! | AGGTTGTTGTTTTTGTGAGG+AGG | + | chr2_2:68715954-68715973 | None:intergenic | 40.0% |
| TTCATCGCCATTAATGGTGA+TGG | + | chr2_2:68716060-68716079 | None:intergenic | 40.0% | |
| TAATCATCAGCGAATAGAGG+AGG | + | chr2_2:68716113-68716132 | None:intergenic | 40.0% | |
| GGTAAGATTTATCTCCCATG+AGG | + | chr2_2:68716208-68716227 | None:intergenic | 40.0% | |
| CATGGGAGATAAATCTTACC+AGG | - | chr2_2:68716208-68716227 | Msa0267230:intron | 40.0% | |
| ! | TTAGTCCATGTTTCTATCCG+TGG | - | chr2_2:68716410-68716429 | Msa0267230:CDS | 40.0% |
| AACTGTTGCAAAACTCACCA+CGG | + | chr2_2:68716430-68716449 | None:intergenic | 40.0% | |
| ! | TGGTGAGTTTTGCAACAGTT+TGG | - | chr2_2:68716430-68716449 | Msa0267230:CDS | 40.0% |
| ACGTTGGGAATAATGCAAAC+GGG | + | chr2_2:68716599-68716618 | None:intergenic | 40.0% | |
| GACGTTGGGAATAATGCAAA+CGG | + | chr2_2:68716600-68716619 | None:intergenic | 40.0% | |
| GCTTGCTTCCATTTACTTTC+TGG | + | chr2_2:68716627-68716646 | None:intergenic | 40.0% | |
| ATGGAAGCAAGCTTCTGATT+TGG | - | chr2_2:68716635-68716654 | Msa0267230:CDS | 40.0% | |
| ! | GTTGACCGTGTTAGTTTAGA+TGG | - | chr2_2:68716678-68716697 | Msa0267230:intron | 40.0% |
| ! | CCCTTTTCGTTTGTTTGGTT+TGG | - | chr2_2:68716795-68716814 | Msa0267230:intron | 40.0% |
| TCAATCCAGAACTAAGCAAG+TGG | - | chr2_2:68716901-68716920 | Msa0267230:intron | 40.0% | |
| TTTGTTGAGCTGTAGCATCT+TGG | + | chr2_2:68716960-68716979 | None:intergenic | 40.0% | |
| GCTACAGCTCAACAAAAAAG+AGG | - | chr2_2:68716964-68716983 | Msa0267230:intron | 40.0% | |
| CAGCTCAACAAAAAAGAGGT+CGG | - | chr2_2:68716968-68716987 | Msa0267230:intron | 40.0% | |
| AAAGAGGTCGGTAGCTATAT+TGG | - | chr2_2:68716980-68716999 | Msa0267230:intron | 40.0% | |
| CTCTTGTCACTCAACTTCAT+AGG | - | chr2_2:68717258-68717277 | Msa0267230:intron | 40.0% | |
| ! | TGAAAAACAGAGGAAGTGTG+AGG | + | chr2_2:68717391-68717410 | None:intergenic | 40.0% |
| AGGTACATACTTTCTTGCCA+TGG | - | chr2_2:68717480-68717499 | Msa0267230:intron | 40.0% | |
| TCTTGCCATGGAAAATTGCT+TGG | - | chr2_2:68717492-68717511 | Msa0267230:intron | 40.0% | |
| ! | ATTCTGGCTGACAGCATTAT+TGG | + | chr2_2:68717541-68717560 | None:intergenic | 40.0% |
| ! | TTGTTTCTCGGATCTAACCT+GGG | + | chr2_2:68717603-68717622 | None:intergenic | 40.0% |
| ! | TTTGTTTCTCGGATCTAACC+TGG | + | chr2_2:68717604-68717623 | None:intergenic | 40.0% |
| CAGGGCTATCATTATGATTG+TGG | - | chr2_2:68717691-68717710 | Msa0267230:CDS | 40.0% | |
| GAACAGCAGAAAGAAAATGC+TGG | + | chr2_2:68717745-68717764 | None:intergenic | 40.0% | |
| GCTACCAAATGTGATATCAG+AGG | - | chr2_2:68717833-68717852 | Msa0267230:intron | 40.0% | |
| GGAACACTTTCTGTGTATGT+AGG | - | chr2_2:68718015-68718034 | Msa0267230:intron | 40.0% | |
| CAGTTGCAGTCATTTACTTC+AGG | - | chr2_2:68718138-68718157 | Msa0267230:intron | 40.0% | |
| ! | ATTGCGCTTTTACATCGTAG+AGG | - | chr2_2:68718236-68718255 | Msa0267230:intron | 40.0% |
| GATCATACCAGGTAATTCAG+TGG | + | chr2_2:68718317-68718336 | None:intergenic | 40.0% | |
| TTGGTCACAAAGATCATACC+AGG | + | chr2_2:68718328-68718347 | None:intergenic | 40.0% | |
| ! | ACAGCAGTCAGTTCTTCTTT+TGG | + | chr2_2:68718347-68718366 | None:intergenic | 40.0% |
| AGCAATGAGAACTCATTGTC+AGG | + | chr2_2:68718754-68718773 | None:intergenic | 40.0% | |
| AGTTCTCATTGCTCATGCTT+TGG | - | chr2_2:68718761-68718780 | Msa0267230:intron | 40.0% | |
| GTTCTCATTGCTCATGCTTT+GGG | - | chr2_2:68718762-68718781 | Msa0267230:intron | 40.0% | |
| AGAACAGAAGATCCAGAAGA+AGG | + | chr2_2:68719071-68719090 | None:intergenic | 40.0% | |
| ! | GAGGGCTTTGATAAAAACGT+AGG | - | chr2_2:68719318-68719337 | Msa0267230:CDS | 40.0% |
| ! | GGCTTTGATAAAAACGTAGG+TGG | - | chr2_2:68719321-68719340 | Msa0267230:CDS | 40.0% |
| GTACAAGAAAAGGGGATAAC+CGG | + | chr2_2:68719572-68719591 | None:intergenic | 40.0% | |
| GAAGTATGAGTGTAGTTCCA+AGG | + | chr2_2:68719697-68719716 | None:intergenic | 40.0% | |
| AAAATGCGTGAATGCTTTGC+AGG | - | chr2_2:68719935-68719954 | Msa0267230:CDS | 40.0% | |
| TATTTATGGTGAAGCAGTGC+GGG | - | chr2_2:68720142-68720161 | Msa0267230:intron | 40.0% | |
| CAGCTTACATACTTATGCAG+AGG | - | chr2_2:68720207-68720226 | Msa0267230:intron | 40.0% | |
| GTCTCAGAACTTGGGATATT+TGG | - | chr2_2:68720293-68720312 | Msa0267230:intron | 40.0% | |
| ATATCATCATCTGACGAAGG+TGG | - | chr2_2:68720485-68720504 | Msa0267230:CDS | 40.0% | |
| TATCATCATCTGACGAAGGT+GGG | - | chr2_2:68720486-68720505 | Msa0267230:CDS | 40.0% | |
| ! | TAGAGCACCTCTAACTTATC+TGG | - | chr2_2:68720556-68720575 | Msa0267230:CDS | 40.0% |
| ! | AGAGCACCTCTAACTTATCT+GGG | - | chr2_2:68720557-68720576 | Msa0267230:CDS | 40.0% |
| CAGGAGGCTCAAATGATAAT+GGG | + | chr2_2:68720607-68720626 | None:intergenic | 40.0% | |
| ACAGGAGGCTCAAATGATAA+TGG | + | chr2_2:68720608-68720627 | None:intergenic | 40.0% | |
| GGCAGACAAATATAAACAGG+AGG | + | chr2_2:68720623-68720642 | None:intergenic | 40.0% | |
| CGATGTTGAAGCAATAGGCA+TGG | - | chr2_2:68715854-68715873 | Msa0267230:three_prime_UTR | 45.0% | |
| ! | TTTTTGTGAGGAGGAGAAGG+AGG | + | chr2_2:68715945-68715964 | None:intergenic | 45.0% |
| ACACCTGCCATCACCATTAA+TGG | - | chr2_2:68716050-68716069 | Msa0267230:CDS | 45.0% | |
| AGAAGAAGGAGAAGAAGACC+TGG | + | chr2_2:68716229-68716248 | None:intergenic | 45.0% | |
| ACTCACCACGGATAGAAACA+TGG | + | chr2_2:68716418-68716437 | None:intergenic | 45.0% | |
| CAGAAATCAGGAATGGTTCC+TGG | - | chr2_2:68716555-68716574 | Msa0267230:CDS | 45.0% | |
| CGTTGGGAATAATGCAAACG+GGG | + | chr2_2:68716598-68716617 | None:intergenic | 45.0% | |
| ! | GGTCACCCTTTTCGTTTGTT+TGG | - | chr2_2:68716790-68716809 | Msa0267230:intron | 45.0% |
| TTCGTCCACTTGCTTAGTTC+TGG | + | chr2_2:68716909-68716928 | None:intergenic | 45.0% | |
| ! | CCAGACCAAGCAATTTTCCA+TGG | + | chr2_2:68717500-68717519 | None:intergenic | 45.0% |
| CCATGGAAAATTGCTTGGTC+TGG | - | chr2_2:68717497-68717516 | Msa0267230:intron | 45.0% | |
| GCTTGGTCTGGATTCAGAAA+AGG | - | chr2_2:68717509-68717528 | Msa0267230:intron | 45.0% | |
| GGAGTGAGTATAATAACCCC+AGG | - | chr2_2:68717583-68717602 | Msa0267230:intron | 45.0% | |
| TGTTTCTCGGATCTAACCTG+GGG | + | chr2_2:68717602-68717621 | None:intergenic | 45.0% | |
| !! | TCCTTAGCTTTGAACACGCA+TGG | - | chr2_2:68717931-68717950 | Msa0267230:intron | 45.0% |
| ACCATGCGTGTTCAAAGCTA+AGG | + | chr2_2:68717935-68717954 | None:intergenic | 45.0% | |
| ATGGCAGAAGTTGACCAAGA+AGG | - | chr2_2:68717976-68717995 | Msa0267230:intron | 45.0% | |
| !! | TGGCCACTTACTGATTCTGA+AGG | + | chr2_2:68718188-68718207 | None:intergenic | 45.0% |
| GGTTAACCCACTGAATTACC+TGG | - | chr2_2:68718307-68718326 | Msa0267230:intron | 45.0% | |
| ATATGCAGGAATGGAGAGCT+AGG | - | chr2_2:68718798-68718817 | Msa0267230:CDS | 45.0% | |
| TGGCACCAAGAAGATTCAAC+AGG | - | chr2_2:68718877-68718896 | Msa0267230:CDS | 45.0% | |
| AGATACCTCTCAAGAACACC+TGG | + | chr2_2:68718914-68718933 | None:intergenic | 45.0% | |
| ! | CAAGCAGAAAAGCATAGGGT+CGG | + | chr2_2:68719243-68719262 | None:intergenic | 45.0% |
| ! | TGGCCAAGCAGAAAAGCATA+GGG | + | chr2_2:68719247-68719266 | None:intergenic | 45.0% |
| ! | ACGGAAGGTTTGGAATAGTG+AGG | - | chr2_2:68719299-68719318 | Msa0267230:intron | 45.0% |
| ! | CGGAAGGTTTGGAATAGTGA+GGG | - | chr2_2:68719300-68719319 | Msa0267230:intron | 45.0% |
| !! | ACTCTGGAGTTTGGATGACT+CGG | - | chr2_2:68719958-68719977 | Msa0267230:CDS | 45.0% |
| !! | GCTGCAGTTTTGATGCGTAA+TGG | - | chr2_2:68720248-68720267 | Msa0267230:intron | 45.0% |
| CGTAATGCTTAACATCCGCT+GGG | - | chr2_2:68720393-68720412 | Msa0267230:CDS | 45.0% | |
| ATCATCATCTGACGAAGGTG+GGG | - | chr2_2:68720487-68720506 | Msa0267230:CDS | 45.0% | |
| !! | TCGCCATTAATGGTGATGGC+AGG | + | chr2_2:68716056-68716075 | None:intergenic | 50.0% |
| TCATCAGCGAATAGAGGAGG+AGG | + | chr2_2:68716110-68716129 | None:intergenic | 50.0% | |
| CTTGTTTGGGCCTCTCTTCA+CGG | - | chr2_2:68716179-68716198 | Msa0267230:intron | 50.0% | |
| TCTCTTCACGGTCTCCTCAT+GGG | - | chr2_2:68716191-68716210 | Msa0267230:intron | 50.0% | |
| !! | ACCAAACGGTGATGGAGACA+TGG | + | chr2_2:68716322-68716341 | None:intergenic | 50.0% |
| ATCAGGAATGGTTCCTGGTG+TGG | - | chr2_2:68716560-68716579 | Msa0267230:CDS | 50.0% | |
| TCAGGAATGGTTCCTGGTGT+GGG | - | chr2_2:68716561-68716580 | Msa0267230:CDS | 50.0% | |
| TGGCTGACAGCATTATTGGC+AGG | + | chr2_2:68717537-68717556 | None:intergenic | 50.0% | |
| ! | CTCACTCCAAGCTTTAGCCA+AGG | + | chr2_2:68717571-68717590 | None:intergenic | 50.0% |
| GCAGTCATTTACTTCAGGGC+TGG | - | chr2_2:68718143-68718162 | Msa0267230:intron | 50.0% | |
| ! | GTTGATTGGTCGGTACAGCT+TGG | - | chr2_2:68718537-68718556 | Msa0267230:intron | 50.0% |
| ATGGAGAGCTAGGCTACTGA+TGG | - | chr2_2:68718808-68718827 | Msa0267230:CDS | 50.0% | |
| CAACAGGAACTTGCAAAGCC+AGG | - | chr2_2:68718893-68718912 | Msa0267230:intron | 50.0% | |
| CAAAGCCAGGTGTTCTTGAG+AGG | - | chr2_2:68718906-68718925 | Msa0267230:intron | 50.0% | |
| GAAGTGAGATCGCCTTCTTC+TGG | - | chr2_2:68719056-68719075 | Msa0267230:CDS | 50.0% | |
| ! | CGACCCTATGCTTTTCTGCT+TGG | - | chr2_2:68719241-68719260 | Msa0267230:intron | 50.0% |
| ! | CTGGCCAAGCAGAAAAGCAT+AGG | + | chr2_2:68719248-68719267 | None:intergenic | 50.0% |
| ! | CTTTTCTGCTTGGCCAGTAG+TGG | - | chr2_2:68719251-68719270 | Msa0267230:intron | 50.0% |
| CGATGCATTCTTGCCACTAC+TGG | + | chr2_2:68719267-68719286 | None:intergenic | 50.0% | |
| GTGAATGCTTTGCAGGACTC+TGG | - | chr2_2:68719942-68719961 | Msa0267230:CDS | 50.0% | |
| !! | CTTTGCAGGACTCTGGAGTT+TGG | - | chr2_2:68719949-68719968 | Msa0267230:CDS | 50.0% |
| GTAATGAAGCCCCAGAGAGA+AGG | - | chr2_2:68720019-68720038 | Msa0267230:intron | 50.0% | |
| AGTACCTCCTCCTTCTCTCT+GGG | + | chr2_2:68720032-68720051 | None:intergenic | 50.0% | |
| TAGTACCTCCTCCTTCTCTC+TGG | + | chr2_2:68720033-68720052 | None:intergenic | 50.0% | |
| GCGTAATGGTTGTTGGCACA+AGG | - | chr2_2:68720262-68720281 | Msa0267230:intron | 50.0% | |
| GCGTAATGCTTAACATCCGC+TGG | - | chr2_2:68720392-68720411 | Msa0267230:CDS | 50.0% | |
| CCTGCAAATTCAAGTCCCAG+CGG | + | chr2_2:68720411-68720430 | None:intergenic | 50.0% | |
| ! | GAGGTGCTCTACATCAAGTG+AGG | + | chr2_2:68720547-68720566 | None:intergenic | 50.0% |
| !! | GCTGCTGCTGCTTCTGCTTT+TGG | - | chr2_2:68715876-68715895 | Msa0267230:three_prime_UTR | 55.0% |
| TCAGCGAATAGAGGAGGAGG+AGG | + | chr2_2:68716107-68716126 | None:intergenic | 55.0% | |
| CATGAGGAGACCGTGAAGAG+AGG | + | chr2_2:68716192-68716211 | None:intergenic | 55.0% | |
| CTCTCTTCACGGTCTCCTCA+TGG | - | chr2_2:68716190-68716209 | Msa0267230:intron | 55.0% | |
| GCCATGTCTCCATCACCGTT+TGG | - | chr2_2:68716318-68716337 | Msa0267230:CDS | 55.0% | |
| GCATGCATCAATCCCACACC+AGG | + | chr2_2:68716576-68716595 | None:intergenic | 55.0% | |
| ! | CCAAGCTTTAGCCAAGGCCT+CGG | + | chr2_2:68717565-68717584 | None:intergenic | 55.0% |
| ATGAAGCCCCAGAGAGAAGG+AGG | - | chr2_2:68720022-68720041 | Msa0267230:intron | 55.0% | |
| GTACCTCCTCCTTCTCTCTG+GGG | + | chr2_2:68720031-68720050 | None:intergenic | 55.0% | |
| ACCACGCCGTCTCAGAACTT+GGG | - | chr2_2:68720285-68720304 | Msa0267230:intron | 55.0% | |
| CCGCTGGGACTTGAATTTGC+AGG | - | chr2_2:68720408-68720427 | Msa0267230:CDS | 55.0% | |
| AGAGGAGGAGGAGGAGGAGA+AGG | + | chr2_2:68716098-68716117 | None:intergenic | 60.0% | |
| GCGAATAGAGGAGGAGGAGG+AGG | + | chr2_2:68716104-68716123 | None:intergenic | 60.0% | |
| TGCTGTCAGCCAGAATGCCG+AGG | - | chr2_2:68717545-68717564 | Msa0267230:intron | 60.0% | |
| TAGCCAAGGCCTCGGCATTC+TGG | + | chr2_2:68717557-68717576 | None:intergenic | 60.0% | |
| CCGAGGCCTTGGCTAAAGCT+TGG | - | chr2_2:68717562-68717581 | Msa0267230:intron | 60.0% | |
| AAGCCCCAGAGAGAAGGAGG+AGG | - | chr2_2:68720025-68720044 | Msa0267230:intron | 60.0% | |
| GACCACGCCGTCTCAGAACT+TGG | - | chr2_2:68720284-68720303 | Msa0267230:intron | 60.0% | |
| !! | TCCCAAGTTCTGAGACGGCG+TGG | + | chr2_2:68720289-68720308 | None:intergenic | 60.0% |
| CAGCCAGAATGCCGAGGCCT+TGG | - | chr2_2:68717551-68717570 | Msa0267230:intron | 65.0% | |
| GACGAAGGTGGGGTTGCAGC+TGG | - | chr2_2:68720497-68720516 | Msa0267230:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 68715824 | 68720769 | 68715824 | ID=Msa0267230;Name=Msa0267230 |
| chr2_2 | mRNA | 68715824 | 68720769 | 68715824 | ID=Msa0267230-mRNA-1;Parent=Msa0267230;Name=Msa0267230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=49|0.90|0.83|1|0.90|0.83|12|216|574 |
| chr2_2 | exon | 68715824 | 68716163 | 68715824 | ID=Msa0267230-mRNA-1:exon:21836;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68716266 | 68716458 | 68716266 | ID=Msa0267230-mRNA-1:exon:21835;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68716547 | 68716686 | 68716547 | ID=Msa0267230-mRNA-1:exon:21834;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68717666 | 68717787 | 68717666 | ID=Msa0267230-mRNA-1:exon:21833;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68718397 | 68718466 | 68718397 | ID=Msa0267230-mRNA-1:exon:21832;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68718565 | 68718668 | 68718565 | ID=Msa0267230-mRNA-1:exon:21831;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68718785 | 68718899 | 68718785 | ID=Msa0267230-mRNA-1:exon:21830;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68718989 | 68719111 | 68718989 | ID=Msa0267230-mRNA-1:exon:21829;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68719314 | 68719444 | 68719314 | ID=Msa0267230-mRNA-1:exon:21828;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68719608 | 68719683 | 68719608 | ID=Msa0267230-mRNA-1:exon:21827;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68719866 | 68720035 | 68719866 | ID=Msa0267230-mRNA-1:exon:21826;Parent=Msa0267230-mRNA-1 |
| chr2_2 | exon | 68720364 | 68720769 | 68720364 | ID=Msa0267230-mRNA-1:exon:21825;Parent=Msa0267230-mRNA-1 |
| chr2_2 | five_prime_UTR | 68720721 | 68720769 | 68720721 | ID=Msa0267230-mRNA-1:five_prime_utr;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68720364 | 68720720 | 68720364 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68719866 | 68720035 | 68719866 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68719608 | 68719683 | 68719608 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68719314 | 68719444 | 68719314 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68718989 | 68719111 | 68718989 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68718785 | 68718899 | 68718785 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68718565 | 68718668 | 68718565 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68718397 | 68718466 | 68718397 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68717666 | 68717787 | 68717666 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68716547 | 68716686 | 68716547 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68716266 | 68716458 | 68716266 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | CDS | 68716040 | 68716163 | 68716040 | ID=Msa0267230-mRNA-1:cds;Parent=Msa0267230-mRNA-1 |
| chr2_2 | three_prime_UTR | 68715824 | 68716039 | 68715824 | ID=Msa0267230-mRNA-1:three_prime_utr;Parent=Msa0267230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
