Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243610 | XP_003594881.1 | 95.573 | 497 | 22 | 0 | 1 | 497 | 1 | 497 | 0.0 | 918 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243610 | sp|O49432|QRT3_ARATH | 61.522 | 460 | 160 | 5 | 38 | 495 | 37 | 481 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243610 | G7INE9 | 95.573 | 497 | 22 | 0 | 1 | 497 | 1 | 497 | 0.0 | 918 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0243610 | Msa0282210 | 0.809832 | 1.557316e-50 | -8.615850e-47 |
| Msa0243610 | Msa1197590 | 0.808456 | 3.069680e-50 | -8.615850e-47 |
| Msa0243610 | Msa1340710 | 0.899102 | 2.762189e-77 | -8.615850e-47 |
| Msa0243610 | Msa1436410 | 0.931507 | 3.407782e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243610 | MtrunA17_Chr2g0296981 | 95.573 | 497 | 22 | 0 | 1 | 497 | 1 | 497 | 0.0 | 918 |
| Msa0243610 | MtrunA17_Chr6g0455291 | 69.880 | 498 | 141 | 4 | 1 | 497 | 5 | 494 | 0.0 | 652 |
| Msa0243610 | MtrunA17_Chr4g0052711 | 46.467 | 467 | 219 | 10 | 43 | 493 | 29 | 480 | 3.88e-139 | 409 |
| Msa0243610 | MtrunA17_Chr2g0297001 | 52.113 | 426 | 184 | 7 | 82 | 493 | 72 | 491 | 8.13e-136 | 401 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243610 | AT4G20050.5 | 61.522 | 460 | 160 | 5 | 38 | 495 | 62 | 506 | 0.0 | 565 |
| Msa0243610 | AT4G20050.7 | 61.522 | 460 | 160 | 5 | 38 | 495 | 37 | 481 | 0.0 | 564 |
| Msa0243610 | AT4G20050.6 | 61.522 | 460 | 160 | 5 | 38 | 495 | 37 | 481 | 0.0 | 564 |
| Msa0243610 | AT4G20050.2 | 61.522 | 460 | 160 | 5 | 38 | 495 | 37 | 481 | 0.0 | 564 |
| Msa0243610 | AT4G20050.1 | 61.522 | 460 | 160 | 5 | 38 | 495 | 37 | 481 | 0.0 | 564 |
| Msa0243610 | AT4G20050.4 | 64.962 | 391 | 127 | 3 | 107 | 495 | 1 | 383 | 0.0 | 515 |
| Msa0243610 | AT4G20050.3 | 64.962 | 391 | 127 | 3 | 107 | 495 | 1 | 383 | 0.0 | 515 |
| Msa0243610 | AT4G20040.1 | 49.173 | 423 | 198 | 4 | 82 | 493 | 67 | 483 | 3.64e-136 | 402 |
Find 97 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTGTAATTGGTGTTTA+TGG | 0.186040 | 2_2:-20862953 | Msa0243610:CDS |
| AACTCTCAAGGACCTCTTAT+TGG | 0.199279 | 2_2:-20861847 | Msa0243610:CDS |
| GTTGTTTGTTTCATTGTAAT+TGG | 0.263362 | 2_2:-20862962 | Msa0243610:CDS |
| TGGTGTACATTGTTACAATA+AGG | 0.274737 | 2_2:-20861532 | Msa0243610:CDS |
| TACAATAAGGCCACTGGATT+CGG | 0.316472 | 2_2:-20861519 | Msa0243610:CDS |
| TGCAACGGGGATGAATTTAA+AGG | 0.328386 | 2_2:-20861205 | Msa0243610:CDS |
| AGGTGTTGAAATTGTTCATT+TGG | 0.332781 | 2_2:-20861283 | Msa0243610:CDS |
| TTATTGGATTCAAACTTTAG+AGG | 0.335089 | 2_2:-20861831 | Msa0243610:CDS |
| AGTTTCTTATGTATGTTTCA+TGG | 0.352507 | 2_2:+20861715 | None:intergenic |
| TGCTATCTGAATTGCCTGTT+GGG | 0.359312 | 2_2:+20862600 | None:intergenic |
| TTGATCAAGTTATTGTTGAT+AGG | 0.379420 | 2_2:-20861233 | Msa0243610:CDS |
| ATGTTCCCAACGCTGGTTAC+CGG | 0.382500 | 2_2:+20862437 | None:intergenic |
| AGAATCATGTCTTGTTAAAG+AGG | 0.407306 | 2_2:+20862853 | None:intergenic |
| CTCTGCTGCTATAGGAATCA+TGG | 0.408545 | 2_2:-20861580 | Msa0243610:CDS |
| GTTGATAGGAACGTTGCAAC+GGG | 0.411337 | 2_2:-20861219 | Msa0243610:CDS |
| GCCACTGGATTCGGCGGTAC+CGG | 0.416083 | 2_2:-20861510 | Msa0243610:CDS |
| CAGTACTCATTAAGTTCAAC+AGG | 0.423624 | 2_2:-20861087 | Msa0243610:CDS |
| ACATTTCTGATAGCATGATT+AGG | 0.424152 | 2_2:+20861054 | None:intergenic |
| CAGAAAGTCACTCAAGTTAC+CGG | 0.424279 | 2_2:-20862456 | Msa0243610:CDS |
| TCAATGATGTAGCCATCATT+TGG | 0.425679 | 2_2:+20861939 | None:intergenic |
| CTAGAAATATGAAGTTGAAC+AGG | 0.426194 | 2_2:+20861405 | None:intergenic |
| GCTATAGGAATCATGGTAAC+TGG | 0.427357 | 2_2:-20861573 | Msa0243610:CDS |
| ACTTGATCAACTTGATGAAA+AGG | 0.437301 | 2_2:+20861246 | None:intergenic |
| TACATAAGAAACTCTTTCCT+TGG | 0.440272 | 2_2:-20861705 | Msa0243610:CDS |
| ATTTCTAGTAGTTTCTTCCT+TGG | 0.441880 | 2_2:-20861390 | Msa0243610:CDS |
| ATTGTAGATAACATGTTCTC+TGG | 0.444931 | 2_2:-20861315 | Msa0243610:CDS |
| TCCATCAAATATCCTTCGCT+TGG | 0.449157 | 2_2:+20862536 | None:intergenic |
| TGCAAGGGAATGGAACTTCA+TGG | 0.449669 | 2_2:-20861161 | Msa0243610:CDS |
| ATTACACATTTCACAACCAA+TGG | 0.452369 | 2_2:-20861756 | Msa0243610:CDS |
| TCCAAGCGAAGGATATTTGA+TGG | 0.464488 | 2_2:-20862537 | Msa0243610:CDS |
| GATGTCACGTGGTATACTCT+TGG | 0.468628 | 2_2:+20862635 | None:intergenic |
| CCTTTCGTGTTTATCGCCTC+CGG | 0.470986 | 2_2:+20861668 | None:intergenic |
| CCTACTAGGAAAATTTCTGA+TGG | 0.476121 | 2_2:-20862917 | Msa0243610:CDS |
| ATATCCTTCGCTTGGACCGT+TGG | 0.476727 | 2_2:+20862544 | None:intergenic |
| ACCTCATCAAATGAAAATGA+TGG | 0.476960 | 2_2:-20861909 | Msa0243610:CDS |
| GTGCTATCTGAATTGCCTGT+TGG | 0.477189 | 2_2:+20862599 | None:intergenic |
| AGTTATGTACTCAAAATTGT+AGG | 0.480837 | 2_2:+20861866 | None:intergenic |
| CGCCTCCGGCGGTTATGTGT+TGG | 0.483145 | 2_2:+20861682 | None:intergenic |
| TAAAGGCTACTGTCGCGAAA+AGG | 0.486640 | 2_2:-20861188 | Msa0243610:CDS |
| TAAAGTTTGAATCCAATAAG+AGG | 0.490425 | 2_2:+20861835 | None:intergenic |
| ACCTCAGCTGGCTGAGAAGA+AGG | 0.497308 | 2_2:+20862794 | None:intergenic |
| TGTATGTTTCATGGCCACTT+TGG | 0.501309 | 2_2:+20861724 | None:intergenic |
| AAAAGGTCGTTGCAAGGGAA+TGG | 0.502322 | 2_2:-20861171 | Msa0243610:CDS |
| GTATACCACGTGACATCATA+TGG | 0.507968 | 2_2:-20862629 | Msa0243610:CDS |
| ATTGTATTATATACCTCAGC+TGG | 0.511049 | 2_2:+20862782 | None:intergenic |
| GGTGCACAAATTAATCTTGA+AGG | 0.512636 | 2_2:-20862494 | Msa0243610:CDS |
| AAGGATTGTGAATTCTTACA+TGG | 0.512683 | 2_2:-20861454 | Msa0243610:CDS |
| ACCGTTGGCTGCATCTGCTA+TGG | 0.521251 | 2_2:+20862559 | None:intergenic |
| CATTGTTACAATAAGGCCAC+TGG | 0.522380 | 2_2:-20861525 | Msa0243610:CDS |
| ATGGAAGGCATCAGTAACCT+TGG | 0.524813 | 2_2:-20862518 | Msa0243610:CDS |
| ACTTTGGACTAAAATTCCAT+TGG | 0.525845 | 2_2:+20861740 | None:intergenic |
| GTCGCGAAAAGGTCGTTGCA+AGG | 0.526188 | 2_2:-20861177 | Msa0243610:CDS |
| TGTTTGTTTCATGCTTCTTG+AGG | 0.528462 | 2_2:-20862984 | Msa0243610:CDS |
| TCATATGGTGCAGACCCAAC+AGG | 0.528783 | 2_2:-20862614 | Msa0243610:CDS |
| TCAAAATTGTAGGATGATGA+AGG | 0.529691 | 2_2:+20861876 | None:intergenic |
| TCCTTCTTCTCAGCCAGCTG+AGG | 0.533497 | 2_2:-20862795 | Msa0243610:intron |
| AGGTAGTTTCAAATAAATTC+CGG | 0.535034 | 2_2:+20861491 | None:intergenic |
| AAACACGAAAGGAATTTCTC+AGG | 0.538491 | 2_2:-20861657 | Msa0243610:CDS |
| AGTTACCGGTAACCAGCGTT+GGG | 0.539499 | 2_2:-20862442 | Msa0243610:CDS |
| AAGTTACCGGTAACCAGCGT+TGG | 0.543200 | 2_2:-20862443 | Msa0243610:CDS |
| TGGATTCAAACTTTAGAGGA+GGG | 0.543439 | 2_2:-20861827 | Msa0243610:CDS |
| TGACAGCATTATCGTTACCT+TGG | 0.545887 | 2_2:+20861619 | None:intergenic |
| GATTAATTTGTGCACCTCCA+AGG | 0.547641 | 2_2:+20862501 | None:intergenic |
| GATTCAAACTTTAGAGGAGG+GGG | 0.548301 | 2_2:-20861825 | Msa0243610:CDS |
| ATGTTCTCTGGATCAAATCA+AGG | 0.548900 | 2_2:-20861303 | Msa0243610:CDS |
| GCCATAGCAGATGCAGCCAA+CGG | 0.558955 | 2_2:-20862560 | Msa0243610:CDS |
| GCTGGCTGAGAAGAAGGAGA+AGG | 0.560665 | 2_2:+20862800 | None:intergenic |
| GGAATTTATTTGAAACTACC+TGG | 0.560862 | 2_2:-20861489 | Msa0243610:CDS |
| GAAGGTGCAAAAGAAGATGA+TGG | 0.564254 | 2_2:+20862818 | None:intergenic |
| GGATTCAAACTTTAGAGGAG+GGG | 0.565517 | 2_2:-20861826 | Msa0243610:CDS |
| GAAAGGAATTTCTCAGGCAC+AGG | 0.566208 | 2_2:-20861651 | Msa0243610:CDS |
| TGTTGATAGGAACGTTGCAA+CGG | 0.568090 | 2_2:-20861220 | Msa0243610:CDS |
| TTGGATTCAAACTTTAGAGG+AGG | 0.571436 | 2_2:-20861828 | Msa0243610:CDS |
| GCACAAATTAATCTTGAAGG+TGG | 0.580445 | 2_2:-20862491 | Msa0243610:CDS |
| TCGCGAAAAGGTCGTTGCAA+GGG | 0.583554 | 2_2:-20861176 | Msa0243610:CDS |
| TACCATGATGTTCCCAACGC+TGG | 0.586939 | 2_2:+20862430 | None:intergenic |
| AGCGAAGGATATTTGATGGA+AGG | 0.588639 | 2_2:-20862533 | Msa0243610:CDS |
| CTTGGCCAACACATAACCGC+CGG | 0.589091 | 2_2:-20861687 | Msa0243610:CDS |
| GAAGGCATCAGTAACCTTGG+AGG | 0.592934 | 2_2:-20862515 | Msa0243610:CDS |
| ATCCTTGTTTGTGTTAAACC+AGG | 0.593807 | 2_2:+20861471 | None:intergenic |
| CGGCGGTTATGTGTTGGCCA+AGG | 0.595647 | 2_2:+20861688 | None:intergenic |
| AGAGAACATGTTATCTACAA+TGG | 0.597546 | 2_2:+20861317 | None:intergenic |
| TCATGCTATCAGAAATGTGT+CGG | 0.600119 | 2_2:-20861049 | Msa0243610:CDS |
| TCCGGTACCGCCGAATCCAG+TGG | 0.602767 | 2_2:+20861509 | None:intergenic |
| GCAGCCAACGGTCCAAGCGA+AGG | 0.606415 | 2_2:-20862548 | Msa0243610:CDS |
| GGCACAGGAATAAACATCCA+AGG | 0.625123 | 2_2:-20861636 | Msa0243610:CDS |
| AATAAGGCCACTGGATTCGG+CGG | 0.629975 | 2_2:-20861516 | Msa0243610:CDS |
| TACCTGGTTTAACACAAACA+AGG | 0.631189 | 2_2:-20861473 | Msa0243610:CDS |
| AACCAGCGTTGGGAACATCA+TGG | 0.637299 | 2_2:-20862432 | Msa0243610:intron |
| AGCAGAGAAAATTACAACAT+CGG | 0.644559 | 2_2:+20861596 | None:intergenic |
| ATTGTGTTGAAATCTATGAA+AGG | 0.648167 | 2_2:-20861357 | Msa0243610:CDS |
| GGCCAACACATAACCGCCGG+AGG | 0.651132 | 2_2:-20861684 | Msa0243610:CDS |
| TTCGTGTTTATCGCCTCCGG+CGG | 0.651957 | 2_2:+20861671 | None:intergenic |
| CTGCACCATATGATGTCACG+TGG | 0.660523 | 2_2:+20862624 | None:intergenic |
| CCGGAGGCGATAAACACGAA+AGG | 0.669288 | 2_2:-20861668 | Msa0243610:CDS |
| ACACAATATTCGCATCACCA+AGG | 0.694010 | 2_2:+20861373 | None:intergenic |
| TTGATAGGAACGTTGCAACG+GGG | 0.722305 | 2_2:-20861218 | Msa0243610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCATACTGTAAAAAAAAA+AGG | + | chr2_2:20861686-20861705 | None:intergenic | 15.0% |
| !! | AAAACTAATTATTTGACAAT+TGG | - | chr2_2:20861725-20861744 | Msa0243610:CDS | 15.0% |
| !!! | TTTTTGTTGTTTTAATTTGA+TGG | - | chr2_2:20861964-20861983 | Msa0243610:CDS | 15.0% |
| !! | TTTCATACTGTAAAAAAAAA+AGG | + | chr2_2:20861686-20861705 | None:intergenic | 15.0% |
| !! | AAAACTAATTATTTGACAAT+TGG | - | chr2_2:20861725-20861744 | Msa0243610:CDS | 15.0% |
| !!! | TTTTTGTTGTTTTAATTTGA+TGG | - | chr2_2:20861964-20861983 | Msa0243610:CDS | 15.0% |
| !!! | TAATTTTAGTAGAGAATACT+AGG | - | chr2_2:20861220-20861239 | Msa0243610:CDS | 20.0% |
| !!! | ATGATTTTTTTTTGTTGTGT+AGG | - | chr2_2:20861301-20861320 | Msa0243610:CDS | 20.0% |
| !!! | TGATTTTTTTTTGTTGTGTA+GGG | - | chr2_2:20861302-20861321 | Msa0243610:CDS | 20.0% |
| !!! | ATAATTAGTTTTTCTACAGT+TGG | + | chr2_2:20861717-20861736 | None:intergenic | 20.0% |
| !! | ATTGTCTCAAAAATTGAATT+TGG | + | chr2_2:20861777-20861796 | None:intergenic | 20.0% |
| !!! | TTTAGTATTTTTAGTCATGA+TGG | - | chr2_2:20861806-20861825 | Msa0243610:CDS | 20.0% |
| !!! | TAATTTTAGTAGAGAATACT+AGG | - | chr2_2:20861220-20861239 | Msa0243610:CDS | 20.0% |
| !!! | ATGATTTTTTTTTGTTGTGT+AGG | - | chr2_2:20861301-20861320 | Msa0243610:CDS | 20.0% |
| !!! | TGATTTTTTTTTGTTGTGTA+GGG | - | chr2_2:20861302-20861321 | Msa0243610:CDS | 20.0% |
| !!! | ATAATTAGTTTTTCTACAGT+TGG | + | chr2_2:20861717-20861736 | None:intergenic | 20.0% |
| !! | ATTGTCTCAAAAATTGAATT+TGG | + | chr2_2:20861777-20861796 | None:intergenic | 20.0% |
| !!! | TTTAGTATTTTTAGTCATGA+TGG | - | chr2_2:20861806-20861825 | Msa0243610:CDS | 20.0% |
| ! | GTTGTTTGTTTCATTGTAAT+TGG | - | chr2_2:20861008-20861027 | Msa0243610:CDS | 25.0% |
| !! | TTCATTGTAATTGGTGTTTA+TGG | - | chr2_2:20861017-20861036 | Msa0243610:CDS | 25.0% |
| ! | AAACTTAGGTACAATGTTAT+AGG | + | chr2_2:20861253-20861272 | None:intergenic | 25.0% |
| !! | ATAGTCAATTCTCATTTTCT+TGG | + | chr2_2:20861854-20861873 | None:intergenic | 25.0% |
| !!! | AAAATCATCTGAAGCTTTTA+TGG | + | chr2_2:20862011-20862030 | None:intergenic | 25.0% |
| ! | AGTTATGTACTCAAAATTGT+AGG | + | chr2_2:20862107-20862126 | None:intergenic | 25.0% |
| ! | TAAAGTTTGAATCCAATAAG+AGG | + | chr2_2:20862138-20862157 | None:intergenic | 25.0% |
| ! | TTATTGGATTCAAACTTTAG+AGG | - | chr2_2:20862139-20862158 | Msa0243610:intron | 25.0% |
| ! | AGTTTCTTATGTATGTTTCA+TGG | + | chr2_2:20862258-20862277 | None:intergenic | 25.0% |
| ! | AGGTAGTTTCAAATAAATTC+CGG | + | chr2_2:20862482-20862501 | None:intergenic | 25.0% |
| ! | ATTGTGTTGAAATCTATGAA+AGG | - | chr2_2:20862613-20862632 | Msa0243610:CDS | 25.0% |
| !!! | TCTATGAAAGGTGTTTTAAA+TGG | - | chr2_2:20862625-20862644 | Msa0243610:CDS | 25.0% |
| ! | TTGATCAAGTTATTGTTGAT+AGG | - | chr2_2:20862737-20862756 | Msa0243610:intron | 25.0% |
| !! | TGAACATTTTTGATAAGGTT+AGG | + | chr2_2:20862865-20862884 | None:intergenic | 25.0% |
| !!! | AGTACTGAACATTTTTGATA+AGG | + | chr2_2:20862870-20862889 | None:intergenic | 25.0% |
| ! | GTTGTTTGTTTCATTGTAAT+TGG | - | chr2_2:20861008-20861027 | Msa0243610:CDS | 25.0% |
| !! | TTCATTGTAATTGGTGTTTA+TGG | - | chr2_2:20861017-20861036 | Msa0243610:CDS | 25.0% |
| ! | AAACTTAGGTACAATGTTAT+AGG | + | chr2_2:20861253-20861272 | None:intergenic | 25.0% |
| !! | ATAGTCAATTCTCATTTTCT+TGG | + | chr2_2:20861854-20861873 | None:intergenic | 25.0% |
| !!! | AAAATCATCTGAAGCTTTTA+TGG | + | chr2_2:20862011-20862030 | None:intergenic | 25.0% |
| ! | AGTTATGTACTCAAAATTGT+AGG | + | chr2_2:20862107-20862126 | None:intergenic | 25.0% |
| ! | TAAAGTTTGAATCCAATAAG+AGG | + | chr2_2:20862138-20862157 | None:intergenic | 25.0% |
| ! | TTATTGGATTCAAACTTTAG+AGG | - | chr2_2:20862139-20862158 | Msa0243610:intron | 25.0% |
| ! | AGTTTCTTATGTATGTTTCA+TGG | + | chr2_2:20862258-20862277 | None:intergenic | 25.0% |
| ! | AGGTAGTTTCAAATAAATTC+CGG | + | chr2_2:20862482-20862501 | None:intergenic | 25.0% |
| ! | ATTGTGTTGAAATCTATGAA+AGG | - | chr2_2:20862613-20862632 | Msa0243610:CDS | 25.0% |
| !!! | TCTATGAAAGGTGTTTTAAA+TGG | - | chr2_2:20862625-20862644 | Msa0243610:CDS | 25.0% |
| ! | TTGATCAAGTTATTGTTGAT+AGG | - | chr2_2:20862737-20862756 | Msa0243610:intron | 25.0% |
| !! | TGAACATTTTTGATAAGGTT+AGG | + | chr2_2:20862865-20862884 | None:intergenic | 25.0% |
| !!! | AGTACTGAACATTTTTGATA+AGG | + | chr2_2:20862870-20862889 | None:intergenic | 25.0% |
| GTGACAAAAATTTACCTACT+AGG | - | chr2_2:20861039-20861058 | Msa0243610:CDS | 30.0% | |
| ! | AGAATCATGTCTTGTTAAAG+AGG | + | chr2_2:20861120-20861139 | None:intergenic | 30.0% |
| ATTGTATTATATACCTCAGC+TGG | + | chr2_2:20861191-20861210 | None:intergenic | 30.0% | |
| !!! | GGAAGTGTTTTAAGACTTTA+TGG | - | chr2_2:20861746-20861765 | Msa0243610:CDS | 30.0% |
| !!! | TGTTTTAAGACTTTATGGCT+AGG | - | chr2_2:20861751-20861770 | Msa0243610:CDS | 30.0% |
| TTGATGGAAAAACAGATACA+TGG | - | chr2_2:20861980-20861999 | Msa0243610:intron | 30.0% | |
| ! | TCAGATGATTTTCCAAATGA+TGG | - | chr2_2:20862019-20862038 | Msa0243610:intron | 30.0% |
| ACCTCATCAAATGAAAATGA+TGG | - | chr2_2:20862061-20862080 | Msa0243610:intron | 30.0% | |
| ! | TCCATCATTTTCATTTGATG+AGG | + | chr2_2:20862065-20862084 | None:intergenic | 30.0% |
| TCAAAATTGTAGGATGATGA+AGG | + | chr2_2:20862097-20862116 | None:intergenic | 30.0% | |
| !! | TTTTGAGTACATAACTCTCA+AGG | - | chr2_2:20862111-20862130 | Msa0243610:intron | 30.0% |
| ATTACACATTTCACAACCAA+TGG | - | chr2_2:20862214-20862233 | Msa0243610:intron | 30.0% | |
| ACTTTGGACTAAAATTCCAT+TGG | + | chr2_2:20862233-20862252 | None:intergenic | 30.0% | |
| !! | AATGGAATTTTAGTCCAAAG+TGG | - | chr2_2:20862232-20862251 | Msa0243610:intron | 30.0% |
| TACATAAGAAACTCTTTCCT+TGG | - | chr2_2:20862265-20862284 | Msa0243610:intron | 30.0% | |
| AGCAGAGAAAATTACAACAT+CGG | + | chr2_2:20862377-20862396 | None:intergenic | 30.0% | |
| TGGTGTACATTGTTACAATA+AGG | - | chr2_2:20862438-20862457 | Msa0243610:CDS | 30.0% | |
| ! | GGAATTTATTTGAAACTACC+TGG | - | chr2_2:20862481-20862500 | Msa0243610:CDS | 30.0% |
| AAGGATTGTGAATTCTTACA+TGG | - | chr2_2:20862516-20862535 | Msa0243610:CDS | 30.0% | |
| CTAGAAATATGAAGTTGAAC+AGG | + | chr2_2:20862568-20862587 | None:intergenic | 30.0% | |
| !! | ATTTCTAGTAGTTTCTTCCT+TGG | - | chr2_2:20862580-20862599 | Msa0243610:CDS | 30.0% |
| AGAGAACATGTTATCTACAA+TGG | + | chr2_2:20862656-20862675 | None:intergenic | 30.0% | |
| ATTGTAGATAACATGTTCTC+TGG | - | chr2_2:20862655-20862674 | Msa0243610:intron | 30.0% | |
| !! | AGGTGTTGAAATTGTTCATT+TGG | - | chr2_2:20862687-20862706 | Msa0243610:intron | 30.0% |
| ACTTGATCAACTTGATGAAA+AGG | + | chr2_2:20862727-20862746 | None:intergenic | 30.0% | |
| ACATTTCTGATAGCATGATT+AGG | + | chr2_2:20862919-20862938 | None:intergenic | 30.0% | |
| GTGACAAAAATTTACCTACT+AGG | - | chr2_2:20861039-20861058 | Msa0243610:CDS | 30.0% | |
| ! | AGAATCATGTCTTGTTAAAG+AGG | + | chr2_2:20861120-20861139 | None:intergenic | 30.0% |
| ATTGTATTATATACCTCAGC+TGG | + | chr2_2:20861191-20861210 | None:intergenic | 30.0% | |
| !!! | GGAAGTGTTTTAAGACTTTA+TGG | - | chr2_2:20861746-20861765 | Msa0243610:CDS | 30.0% |
| !!! | TGTTTTAAGACTTTATGGCT+AGG | - | chr2_2:20861751-20861770 | Msa0243610:CDS | 30.0% |
| TTGATGGAAAAACAGATACA+TGG | - | chr2_2:20861980-20861999 | Msa0243610:intron | 30.0% | |
| ! | TCAGATGATTTTCCAAATGA+TGG | - | chr2_2:20862019-20862038 | Msa0243610:intron | 30.0% |
| ACCTCATCAAATGAAAATGA+TGG | - | chr2_2:20862061-20862080 | Msa0243610:intron | 30.0% | |
| ! | TCCATCATTTTCATTTGATG+AGG | + | chr2_2:20862065-20862084 | None:intergenic | 30.0% |
| TCAAAATTGTAGGATGATGA+AGG | + | chr2_2:20862097-20862116 | None:intergenic | 30.0% | |
| !! | TTTTGAGTACATAACTCTCA+AGG | - | chr2_2:20862111-20862130 | Msa0243610:intron | 30.0% |
| ATTACACATTTCACAACCAA+TGG | - | chr2_2:20862214-20862233 | Msa0243610:intron | 30.0% | |
| ACTTTGGACTAAAATTCCAT+TGG | + | chr2_2:20862233-20862252 | None:intergenic | 30.0% | |
| !! | AATGGAATTTTAGTCCAAAG+TGG | - | chr2_2:20862232-20862251 | Msa0243610:intron | 30.0% |
| TACATAAGAAACTCTTTCCT+TGG | - | chr2_2:20862265-20862284 | Msa0243610:intron | 30.0% | |
| AGCAGAGAAAATTACAACAT+CGG | + | chr2_2:20862377-20862396 | None:intergenic | 30.0% | |
| TGGTGTACATTGTTACAATA+AGG | - | chr2_2:20862438-20862457 | Msa0243610:CDS | 30.0% | |
| ! | GGAATTTATTTGAAACTACC+TGG | - | chr2_2:20862481-20862500 | Msa0243610:CDS | 30.0% |
| AAGGATTGTGAATTCTTACA+TGG | - | chr2_2:20862516-20862535 | Msa0243610:CDS | 30.0% | |
| CTAGAAATATGAAGTTGAAC+AGG | + | chr2_2:20862568-20862587 | None:intergenic | 30.0% | |
| !! | ATTTCTAGTAGTTTCTTCCT+TGG | - | chr2_2:20862580-20862599 | Msa0243610:CDS | 30.0% |
| AGAGAACATGTTATCTACAA+TGG | + | chr2_2:20862656-20862675 | None:intergenic | 30.0% | |
| ATTGTAGATAACATGTTCTC+TGG | - | chr2_2:20862655-20862674 | Msa0243610:intron | 30.0% | |
| !! | AGGTGTTGAAATTGTTCATT+TGG | - | chr2_2:20862687-20862706 | Msa0243610:intron | 30.0% |
| ACTTGATCAACTTGATGAAA+AGG | + | chr2_2:20862727-20862746 | None:intergenic | 30.0% | |
| ACATTTCTGATAGCATGATT+AGG | + | chr2_2:20862919-20862938 | None:intergenic | 30.0% | |
| TGTTTGTTTCATGCTTCTTG+AGG | - | chr2_2:20860986-20861005 | Msa0243610:CDS | 35.0% | |
| ! | CCATCAGAAATTTTCCTAGT+AGG | + | chr2_2:20861056-20861075 | None:intergenic | 35.0% |
| CCTACTAGGAAAATTTCTGA+TGG | - | chr2_2:20861053-20861072 | Msa0243610:CDS | 35.0% | |
| GTACCTAAGTTTGTCATTGT+CGG | - | chr2_2:20861261-20861280 | Msa0243610:CDS | 35.0% | |
| TTTCCGACAATGACAAACTT+AGG | + | chr2_2:20861267-20861286 | None:intergenic | 35.0% | |
| GGTGCACAAATTAATCTTGA+AGG | - | chr2_2:20861476-20861495 | Msa0243610:CDS | 35.0% | |
| GCACAAATTAATCTTGAAGG+TGG | - | chr2_2:20861479-20861498 | Msa0243610:CDS | 35.0% | |
| AGCAAATGAAACAATTTCGC+AGG | + | chr2_2:20861568-20861587 | None:intergenic | 35.0% | |
| ATGGAAAAACAGATACATGG+AGG | - | chr2_2:20861983-20862002 | Msa0243610:intron | 35.0% | |
| TCAATGATGTAGCCATCATT+TGG | + | chr2_2:20862034-20862053 | None:intergenic | 35.0% | |
| ! | TTGGATTCAAACTTTAGAGG+AGG | - | chr2_2:20862142-20862161 | Msa0243610:intron | 35.0% |
| ! | TGGATTCAAACTTTAGAGGA+GGG | - | chr2_2:20862143-20862162 | Msa0243610:intron | 35.0% |
| AAACACGAAAGGAATTTCTC+AGG | - | chr2_2:20862313-20862332 | Msa0243610:intron | 35.0% | |
| ! | GTAATTTTCTCTGCTGCTAT+AGG | - | chr2_2:20862382-20862401 | Msa0243610:intron | 35.0% |
| TACCTGGTTTAACACAAACA+AGG | - | chr2_2:20862497-20862516 | Msa0243610:CDS | 35.0% | |
| ! | ATCCTTGTTTGTGTTAAACC+AGG | + | chr2_2:20862502-20862521 | None:intergenic | 35.0% |
| ATGTTCTCTGGATCAAATCA+AGG | - | chr2_2:20862667-20862686 | Msa0243610:intron | 35.0% | |
| CAGTACTCATTAAGTTCAAC+AGG | - | chr2_2:20862883-20862902 | Msa0243610:CDS | 35.0% | |
| TCATGCTATCAGAAATGTGT+CGG | - | chr2_2:20862921-20862940 | Msa0243610:CDS | 35.0% | |
| TGTTTGTTTCATGCTTCTTG+AGG | - | chr2_2:20860986-20861005 | Msa0243610:CDS | 35.0% | |
| ! | CCATCAGAAATTTTCCTAGT+AGG | + | chr2_2:20861056-20861075 | None:intergenic | 35.0% |
| CCTACTAGGAAAATTTCTGA+TGG | - | chr2_2:20861053-20861072 | Msa0243610:CDS | 35.0% | |
| GTACCTAAGTTTGTCATTGT+CGG | - | chr2_2:20861261-20861280 | Msa0243610:CDS | 35.0% | |
| TTTCCGACAATGACAAACTT+AGG | + | chr2_2:20861267-20861286 | None:intergenic | 35.0% | |
| GGTGCACAAATTAATCTTGA+AGG | - | chr2_2:20861476-20861495 | Msa0243610:CDS | 35.0% | |
| GCACAAATTAATCTTGAAGG+TGG | - | chr2_2:20861479-20861498 | Msa0243610:CDS | 35.0% | |
| AGCAAATGAAACAATTTCGC+AGG | + | chr2_2:20861568-20861587 | None:intergenic | 35.0% | |
| ATGGAAAAACAGATACATGG+AGG | - | chr2_2:20861983-20862002 | Msa0243610:intron | 35.0% | |
| TCAATGATGTAGCCATCATT+TGG | + | chr2_2:20862034-20862053 | None:intergenic | 35.0% | |
| ! | TTGGATTCAAACTTTAGAGG+AGG | - | chr2_2:20862142-20862161 | Msa0243610:intron | 35.0% |
| ! | TGGATTCAAACTTTAGAGGA+GGG | - | chr2_2:20862143-20862162 | Msa0243610:intron | 35.0% |
| AAACACGAAAGGAATTTCTC+AGG | - | chr2_2:20862313-20862332 | Msa0243610:intron | 35.0% | |
| ! | GTAATTTTCTCTGCTGCTAT+AGG | - | chr2_2:20862382-20862401 | Msa0243610:intron | 35.0% |
| TACCTGGTTTAACACAAACA+AGG | - | chr2_2:20862497-20862516 | Msa0243610:CDS | 35.0% | |
| ! | ATCCTTGTTTGTGTTAAACC+AGG | + | chr2_2:20862502-20862521 | None:intergenic | 35.0% |
| ATGTTCTCTGGATCAAATCA+AGG | - | chr2_2:20862667-20862686 | Msa0243610:intron | 35.0% | |
| CAGTACTCATTAAGTTCAAC+AGG | - | chr2_2:20862883-20862902 | Msa0243610:CDS | 35.0% | |
| TCATGCTATCAGAAATGTGT+CGG | - | chr2_2:20862921-20862940 | Msa0243610:CDS | 35.0% | |
| ! | GAAGGTGCAAAAGAAGATGA+TGG | + | chr2_2:20861155-20861174 | None:intergenic | 40.0% |
| GTATACCACGTGACATCATA+TGG | - | chr2_2:20861341-20861360 | Msa0243610:CDS | 40.0% | |
| TGCTATCTGAATTGCCTGTT+GGG | + | chr2_2:20861373-20861392 | None:intergenic | 40.0% | |
| TCCAAGCGAAGGATATTTGA+TGG | - | chr2_2:20861433-20861452 | Msa0243610:CDS | 40.0% | |
| TCCATCAAATATCCTTCGCT+TGG | + | chr2_2:20861437-20861456 | None:intergenic | 40.0% | |
| AGCGAAGGATATTTGATGGA+AGG | - | chr2_2:20861437-20861456 | Msa0243610:CDS | 40.0% | |
| !! | GATTAATTTGTGCACCTCCA+AGG | + | chr2_2:20861472-20861491 | None:intergenic | 40.0% |
| CAGAAAGTCACTCAAGTTAC+CGG | - | chr2_2:20861514-20861533 | Msa0243610:CDS | 40.0% | |
| ! | ACTGTAGAAACTGATTCTCG+AGG | - | chr2_2:20861630-20861649 | Msa0243610:CDS | 40.0% |
| ! | AGTCATGATGGTGAAGTAGT+TGG | - | chr2_2:20861818-20861837 | Msa0243610:CDS | 40.0% |
| AACTCTCAAGGACCTCTTAT+TGG | - | chr2_2:20862123-20862142 | Msa0243610:intron | 40.0% | |
| ! | GGATTCAAACTTTAGAGGAG+GGG | - | chr2_2:20862144-20862163 | Msa0243610:intron | 40.0% |
| ! | GATTCAAACTTTAGAGGAGG+GGG | - | chr2_2:20862145-20862164 | Msa0243610:intron | 40.0% |
| TGTATGTTTCATGGCCACTT+TGG | + | chr2_2:20862249-20862268 | None:intergenic | 40.0% | |
| TGACAGCATTATCGTTACCT+TGG | + | chr2_2:20862354-20862373 | None:intergenic | 40.0% | |
| GCTATAGGAATCATGGTAAC+TGG | - | chr2_2:20862397-20862416 | Msa0243610:intron | 40.0% | |
| ! | GGTCAAGCAAACACATTTTC+TGG | - | chr2_2:20862418-20862437 | Msa0243610:intron | 40.0% |
| CATTGTTACAATAAGGCCAC+TGG | - | chr2_2:20862445-20862464 | Msa0243610:CDS | 40.0% | |
| TACAATAAGGCCACTGGATT+CGG | - | chr2_2:20862451-20862470 | Msa0243610:CDS | 40.0% | |
| ACACAATATTCGCATCACCA+AGG | + | chr2_2:20862600-20862619 | None:intergenic | 40.0% | |
| ! | TGTTGATAGGAACGTTGCAA+CGG | - | chr2_2:20862750-20862769 | Msa0243610:intron | 40.0% |
| TGCAACGGGGATGAATTTAA+AGG | - | chr2_2:20862765-20862784 | Msa0243610:intron | 40.0% | |
| ! | GAAGGTGCAAAAGAAGATGA+TGG | + | chr2_2:20861155-20861174 | None:intergenic | 40.0% |
| GTATACCACGTGACATCATA+TGG | - | chr2_2:20861341-20861360 | Msa0243610:CDS | 40.0% | |
| TGCTATCTGAATTGCCTGTT+GGG | + | chr2_2:20861373-20861392 | None:intergenic | 40.0% | |
| TCCAAGCGAAGGATATTTGA+TGG | - | chr2_2:20861433-20861452 | Msa0243610:CDS | 40.0% | |
| TCCATCAAATATCCTTCGCT+TGG | + | chr2_2:20861437-20861456 | None:intergenic | 40.0% | |
| AGCGAAGGATATTTGATGGA+AGG | - | chr2_2:20861437-20861456 | Msa0243610:CDS | 40.0% | |
| !! | GATTAATTTGTGCACCTCCA+AGG | + | chr2_2:20861472-20861491 | None:intergenic | 40.0% |
| CAGAAAGTCACTCAAGTTAC+CGG | - | chr2_2:20861514-20861533 | Msa0243610:CDS | 40.0% | |
| ! | ACTGTAGAAACTGATTCTCG+AGG | - | chr2_2:20861630-20861649 | Msa0243610:CDS | 40.0% |
| ! | AGTCATGATGGTGAAGTAGT+TGG | - | chr2_2:20861818-20861837 | Msa0243610:CDS | 40.0% |
| AACTCTCAAGGACCTCTTAT+TGG | - | chr2_2:20862123-20862142 | Msa0243610:intron | 40.0% | |
| ! | GGATTCAAACTTTAGAGGAG+GGG | - | chr2_2:20862144-20862163 | Msa0243610:intron | 40.0% |
| ! | GATTCAAACTTTAGAGGAGG+GGG | - | chr2_2:20862145-20862164 | Msa0243610:intron | 40.0% |
| TGTATGTTTCATGGCCACTT+TGG | + | chr2_2:20862249-20862268 | None:intergenic | 40.0% | |
| TGACAGCATTATCGTTACCT+TGG | + | chr2_2:20862354-20862373 | None:intergenic | 40.0% | |
| GCTATAGGAATCATGGTAAC+TGG | - | chr2_2:20862397-20862416 | Msa0243610:intron | 40.0% | |
| ! | GGTCAAGCAAACACATTTTC+TGG | - | chr2_2:20862418-20862437 | Msa0243610:intron | 40.0% |
| CATTGTTACAATAAGGCCAC+TGG | - | chr2_2:20862445-20862464 | Msa0243610:CDS | 40.0% | |
| TACAATAAGGCCACTGGATT+CGG | - | chr2_2:20862451-20862470 | Msa0243610:CDS | 40.0% | |
| ACACAATATTCGCATCACCA+AGG | + | chr2_2:20862600-20862619 | None:intergenic | 40.0% | |
| ! | TGTTGATAGGAACGTTGCAA+CGG | - | chr2_2:20862750-20862769 | Msa0243610:intron | 40.0% |
| TGCAACGGGGATGAATTTAA+AGG | - | chr2_2:20862765-20862784 | Msa0243610:intron | 40.0% | |
| GATGTCACGTGGTATACTCT+TGG | + | chr2_2:20861338-20861357 | None:intergenic | 45.0% | |
| GTGCTATCTGAATTGCCTGT+TGG | + | chr2_2:20861374-20861393 | None:intergenic | 45.0% | |
| !! | ATGGAAGGCATCAGTAACCT+TGG | - | chr2_2:20861452-20861471 | Msa0243610:CDS | 45.0% |
| GAAAGGAATTTCTCAGGCAC+AGG | - | chr2_2:20862319-20862338 | Msa0243610:intron | 45.0% | |
| GGCACAGGAATAAACATCCA+AGG | - | chr2_2:20862334-20862353 | Msa0243610:intron | 45.0% | |
| CTCTGCTGCTATAGGAATCA+TGG | - | chr2_2:20862390-20862409 | Msa0243610:intron | 45.0% | |
| ! | GTTGATAGGAACGTTGCAAC+GGG | - | chr2_2:20862751-20862770 | Msa0243610:intron | 45.0% |
| TTGATAGGAACGTTGCAACG+GGG | - | chr2_2:20862752-20862771 | Msa0243610:intron | 45.0% | |
| TAAAGGCTACTGTCGCGAAA+AGG | - | chr2_2:20862782-20862801 | Msa0243610:intron | 45.0% | |
| AAAAGGTCGTTGCAAGGGAA+TGG | - | chr2_2:20862799-20862818 | Msa0243610:CDS | 45.0% | |
| TGCAAGGGAATGGAACTTCA+TGG | - | chr2_2:20862809-20862828 | Msa0243610:CDS | 45.0% | |
| GATGTCACGTGGTATACTCT+TGG | + | chr2_2:20861338-20861357 | None:intergenic | 45.0% | |
| GTGCTATCTGAATTGCCTGT+TGG | + | chr2_2:20861374-20861393 | None:intergenic | 45.0% | |
| !! | ATGGAAGGCATCAGTAACCT+TGG | - | chr2_2:20861452-20861471 | Msa0243610:CDS | 45.0% |
| GAAAGGAATTTCTCAGGCAC+AGG | - | chr2_2:20862319-20862338 | Msa0243610:intron | 45.0% | |
| GGCACAGGAATAAACATCCA+AGG | - | chr2_2:20862334-20862353 | Msa0243610:intron | 45.0% | |
| CTCTGCTGCTATAGGAATCA+TGG | - | chr2_2:20862390-20862409 | Msa0243610:intron | 45.0% | |
| ! | GTTGATAGGAACGTTGCAAC+GGG | - | chr2_2:20862751-20862770 | Msa0243610:intron | 45.0% |
| TTGATAGGAACGTTGCAACG+GGG | - | chr2_2:20862752-20862771 | Msa0243610:intron | 45.0% | |
| TAAAGGCTACTGTCGCGAAA+AGG | - | chr2_2:20862782-20862801 | Msa0243610:intron | 45.0% | |
| AAAAGGTCGTTGCAAGGGAA+TGG | - | chr2_2:20862799-20862818 | Msa0243610:CDS | 45.0% | |
| TGCAAGGGAATGGAACTTCA+TGG | - | chr2_2:20862809-20862828 | Msa0243610:CDS | 45.0% | |
| CTGCACCATATGATGTCACG+TGG | + | chr2_2:20861349-20861368 | None:intergenic | 50.0% | |
| TCATATGGTGCAGACCCAAC+AGG | - | chr2_2:20861356-20861375 | Msa0243610:CDS | 50.0% | |
| ATATCCTTCGCTTGGACCGT+TGG | + | chr2_2:20861429-20861448 | None:intergenic | 50.0% | |
| !! | GAAGGCATCAGTAACCTTGG+AGG | - | chr2_2:20861455-20861474 | Msa0243610:CDS | 50.0% |
| AAGTTACCGGTAACCAGCGT+TGG | - | chr2_2:20861527-20861546 | Msa0243610:CDS | 50.0% | |
| AGTTACCGGTAACCAGCGTT+GGG | - | chr2_2:20861528-20861547 | Msa0243610:CDS | 50.0% | |
| ! | ATGTTCCCAACGCTGGTTAC+CGG | + | chr2_2:20861536-20861555 | None:intergenic | 50.0% |
| ! | AACCAGCGTTGGGAACATCA+TGG | - | chr2_2:20861538-20861557 | Msa0243610:CDS | 50.0% |
| TACCATGATGTTCCCAACGC+TGG | + | chr2_2:20861543-20861562 | None:intergenic | 50.0% | |
| CCTTTCGTGTTTATCGCCTC+CGG | + | chr2_2:20862305-20862324 | None:intergenic | 50.0% | |
| AATAAGGCCACTGGATTCGG+CGG | - | chr2_2:20862454-20862473 | Msa0243610:CDS | 50.0% | |
| TCGCGAAAAGGTCGTTGCAA+GGG | - | chr2_2:20862794-20862813 | Msa0243610:intron | 50.0% | |
| !! | CGCTGCGAATGTTTTTGTCG+CGG | - | chr2_2:20862978-20862997 | Msa0243610:CDS | 50.0% |
| !! | TGCGAATGTTTTTGTCGCGG+TGG | - | chr2_2:20862981-20863000 | Msa0243610:CDS | 50.0% |
| CTGCACCATATGATGTCACG+TGG | + | chr2_2:20861349-20861368 | None:intergenic | 50.0% | |
| TCATATGGTGCAGACCCAAC+AGG | - | chr2_2:20861356-20861375 | Msa0243610:CDS | 50.0% | |
| ATATCCTTCGCTTGGACCGT+TGG | + | chr2_2:20861429-20861448 | None:intergenic | 50.0% | |
| !! | GAAGGCATCAGTAACCTTGG+AGG | - | chr2_2:20861455-20861474 | Msa0243610:CDS | 50.0% |
| AAGTTACCGGTAACCAGCGT+TGG | - | chr2_2:20861527-20861546 | Msa0243610:CDS | 50.0% | |
| AGTTACCGGTAACCAGCGTT+GGG | - | chr2_2:20861528-20861547 | Msa0243610:CDS | 50.0% | |
| ! | ATGTTCCCAACGCTGGTTAC+CGG | + | chr2_2:20861536-20861555 | None:intergenic | 50.0% |
| ! | AACCAGCGTTGGGAACATCA+TGG | - | chr2_2:20861538-20861557 | Msa0243610:CDS | 50.0% |
| TACCATGATGTTCCCAACGC+TGG | + | chr2_2:20861543-20861562 | None:intergenic | 50.0% | |
| CCTTTCGTGTTTATCGCCTC+CGG | + | chr2_2:20862305-20862324 | None:intergenic | 50.0% | |
| AATAAGGCCACTGGATTCGG+CGG | - | chr2_2:20862454-20862473 | Msa0243610:CDS | 50.0% | |
| TCGCGAAAAGGTCGTTGCAA+GGG | - | chr2_2:20862794-20862813 | Msa0243610:intron | 50.0% | |
| !! | CGCTGCGAATGTTTTTGTCG+CGG | - | chr2_2:20862978-20862997 | Msa0243610:CDS | 50.0% |
| !! | TGCGAATGTTTTTGTCGCGG+TGG | - | chr2_2:20862981-20863000 | Msa0243610:CDS | 50.0% |
| GCTGGCTGAGAAGAAGGAGA+AGG | + | chr2_2:20861173-20861192 | None:intergenic | 55.0% | |
| TCCTTCTTCTCAGCCAGCTG+AGG | - | chr2_2:20861175-20861194 | Msa0243610:CDS | 55.0% | |
| ACCTCAGCTGGCTGAGAAGA+AGG | + | chr2_2:20861179-20861198 | None:intergenic | 55.0% | |
| GCCATAGCAGATGCAGCCAA+CGG | - | chr2_2:20861410-20861429 | Msa0243610:CDS | 55.0% | |
| ! | ACCGTTGGCTGCATCTGCTA+TGG | + | chr2_2:20861414-20861433 | None:intergenic | 55.0% |
| CTTGGCCAACACATAACCGC+CGG | - | chr2_2:20862283-20862302 | Msa0243610:intron | 55.0% | |
| TTCGTGTTTATCGCCTCCGG+CGG | + | chr2_2:20862302-20862321 | None:intergenic | 55.0% | |
| CCGGAGGCGATAAACACGAA+AGG | - | chr2_2:20862302-20862321 | Msa0243610:intron | 55.0% | |
| GTCGCGAAAAGGTCGTTGCA+AGG | - | chr2_2:20862793-20862812 | Msa0243610:intron | 55.0% | |
| GCTGGCTGAGAAGAAGGAGA+AGG | + | chr2_2:20861173-20861192 | None:intergenic | 55.0% | |
| TCCTTCTTCTCAGCCAGCTG+AGG | - | chr2_2:20861175-20861194 | Msa0243610:CDS | 55.0% | |
| ACCTCAGCTGGCTGAGAAGA+AGG | + | chr2_2:20861179-20861198 | None:intergenic | 55.0% | |
| GCCATAGCAGATGCAGCCAA+CGG | - | chr2_2:20861410-20861429 | Msa0243610:CDS | 55.0% | |
| ! | ACCGTTGGCTGCATCTGCTA+TGG | + | chr2_2:20861414-20861433 | None:intergenic | 55.0% |
| CTTGGCCAACACATAACCGC+CGG | - | chr2_2:20862283-20862302 | Msa0243610:intron | 55.0% | |
| TTCGTGTTTATCGCCTCCGG+CGG | + | chr2_2:20862302-20862321 | None:intergenic | 55.0% | |
| CCGGAGGCGATAAACACGAA+AGG | - | chr2_2:20862302-20862321 | Msa0243610:intron | 55.0% | |
| GTCGCGAAAAGGTCGTTGCA+AGG | - | chr2_2:20862793-20862812 | Msa0243610:intron | 55.0% | |
| ! | CGGCGGTTATGTGTTGGCCA+AGG | + | chr2_2:20862285-20862304 | None:intergenic | 60.0% |
| ! | CGGCGGTTATGTGTTGGCCA+AGG | + | chr2_2:20862285-20862304 | None:intergenic | 60.0% |
| GCAGCCAACGGTCCAAGCGA+AGG | - | chr2_2:20861422-20861441 | Msa0243610:CDS | 65.0% | |
| GGCCAACACATAACCGCCGG+AGG | - | chr2_2:20862286-20862305 | Msa0243610:intron | 65.0% | |
| CGCCTCCGGCGGTTATGTGT+TGG | + | chr2_2:20862291-20862310 | None:intergenic | 65.0% | |
| GCCACTGGATTCGGCGGTAC+CGG | - | chr2_2:20862460-20862479 | Msa0243610:CDS | 65.0% | |
| TCCGGTACCGCCGAATCCAG+TGG | + | chr2_2:20862464-20862483 | None:intergenic | 65.0% | |
| GCAGCCAACGGTCCAAGCGA+AGG | - | chr2_2:20861422-20861441 | Msa0243610:CDS | 65.0% | |
| GGCCAACACATAACCGCCGG+AGG | - | chr2_2:20862286-20862305 | Msa0243610:intron | 65.0% | |
| CGCCTCCGGCGGTTATGTGT+TGG | + | chr2_2:20862291-20862310 | None:intergenic | 65.0% | |
| GCCACTGGATTCGGCGGTAC+CGG | - | chr2_2:20862460-20862479 | Msa0243610:CDS | 65.0% | |
| TCCGGTACCGCCGAATCCAG+TGG | + | chr2_2:20862464-20862483 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 20860969 | 20863023 | 20860969 | ID=Msa0243610;Name=Msa0243610 |
| chr2_2 | mRNA | 20860969 | 20863023 | 20860969 | ID=Msa0243610-mRNA-1;Parent=Msa0243610;Name=Msa0243610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.33|1|1|1|3|0|497 |
| chr2_2 | exon | 20862796 | 20863023 | 20862796 | ID=Msa0243610-mRNA-1:exon:8315;Parent=Msa0243610-mRNA-1 |
| chr2_2 | exon | 20862433 | 20862669 | 20862433 | ID=Msa0243610-mRNA-1:exon:8314;Parent=Msa0243610-mRNA-1 |
| chr2_2 | exon | 20860969 | 20861997 | 20860969 | ID=Msa0243610-mRNA-1:exon:8313;Parent=Msa0243610-mRNA-1 |
| chr2_2 | CDS | 20862796 | 20863023 | 20862796 | ID=Msa0243610-mRNA-1:cds;Parent=Msa0243610-mRNA-1 |
| chr2_2 | CDS | 20862433 | 20862669 | 20862433 | ID=Msa0243610-mRNA-1:cds;Parent=Msa0243610-mRNA-1 |
| chr2_2 | CDS | 20860969 | 20861997 | 20860969 | ID=Msa0243610-mRNA-1:cds;Parent=Msa0243610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
