AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0244100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244100 MtrunA17_Chr2g0297871 93.878 637 32 1 179 808 27 663 0.0 1214
Msa0244100 MtrunA17_Chr4g0071991 60.258 697 275 2 3 697 8 704 0.0 830
Msa0244100 MtrunA17_Chr2g0297861 97.238 181 5 0 1 181 1 181 2.32e-121 362
Msa0244100 MtrunA17_Chr2g0297051 32.253 648 362 19 85 667 343 978 2.21e-80 279
Msa0244100 MtrunA17_Chr4g0052521 27.882 746 437 19 12 664 203 940 4.06e-74 261
Msa0244100 MtrunA17_Chr8g0339181 30.795 604 349 16 128 681 347 931 8.17e-73 256
Msa0244100 MtrunA17_Chr5g0397621 30.147 544 333 10 156 664 313 844 5.70e-72 253
Msa0244100 MtrunA17_Chr4g0050431 32.796 558 328 12 128 648 310 857 1.93e-67 241
Msa0244100 MtrunA17_Chr4g0053441 29.017 641 379 14 117 693 163 791 2.84e-66 236
Msa0244100 MtrunA17_Chr3g0136331 31.992 497 295 11 204 664 355 844 1.32e-64 232
Msa0244100 MtrunA17_Chr8g0374321 28.529 340 203 7 94 399 337 670 1.40e-35 144
Msa0244100 MtrunA17_Chr8g0374371 30.952 168 98 3 201 352 22 187 1.65e-21 94.4
Msa0244100 MtrunA17_Chr8g0374391 32.338 201 117 7 509 699 35 226 1.35e-20 92.0
Msa0244100 MtrunA17_Chr8g0374331 32.338 201 117 7 509 699 42 233 1.45e-20 92.0
Msa0244100 MtrunA17_Chr2g0298031 24.587 545 336 18 214 691 160 696 2.68e-18 90.1
Msa0244100 MtrunA17_Chr3g0138931 24.044 549 333 20 214 691 155 690 1.37e-17 87.8
Msa0244100 MtrunA17_Chr6g0452721 23.377 539 349 18 214 691 157 692 1.64e-17 87.8
Msa0244100 MtrunA17_Chr1g0148031 22.769 549 340 19 214 691 155 690 7.97e-17 85.5
Msa0244100 MtrunA17_Chr1g0147981 23.748 539 330 16 214 684 172 697 8.61e-17 85.5
Msa0244100 MtrunA17_Chr4g0059961 23.162 544 344 18 214 691 159 694 1.33e-16 84.7
Msa0244100 MtrunA17_Chr8g0365021 23.400 547 339 19 214 691 225 760 1.35e-16 84.7
Msa0244100 MtrunA17_Chr2g0304941 22.686 551 338 19 214 691 156 691 1.89e-15 80.9
Msa0244100 MtrunA17_Chr8g0346461 27.309 249 136 7 509 712 619 867 1.03e-14 78.6
Msa0244100 MtrunA17_Chr2g0333721 23.913 552 330 23 214 691 153 688 1.21e-14 78.2
Msa0244100 MtrunA17_Chr8g0355421 27.143 210 115 6 506 677 636 845 3.14e-14 77.0
Msa0244100 MtrunA17_Chr7g0260401 30.303 165 83 3 506 638 669 833 3.75e-14 77.0
Msa0244100 MtrunA17_Chr7g0263361 26.484 219 120 5 509 686 626 844 4.15e-14 76.6
Msa0244100 MtrunA17_Chr6g0456201 28.571 210 109 8 508 676 640 849 2.07e-13 74.3
Msa0244100 MtrunA17_Chr3g0134951 27.711 249 134 10 508 712 582 828 5.21e-13 73.2
Msa0244100 MtrunA17_Chr4g0002331 29.814 161 82 4 509 638 709 869 1.38e-12 71.6
Msa0244100 MtrunA17_Chr2g0298871 26.702 191 106 4 482 638 666 856 4.91e-12 70.1
Msa0244100 MtrunA17_Chr8g0382071 27.168 173 99 3 493 638 632 804 5.53e-12 69.7
Msa0244100 MtrunA17_Chr3g0134771 26.923 208 115 7 506 676 648 855 2.11e-11 67.8
Msa0244100 MtrunA17_Chr4g0020551 28.662 157 86 3 508 638 583 739 4.57e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244100 AT4G30110.1 56.143 757 311 6 3 748 4 750 0.0 859
Msa0244100 AT4G30110.2 56.143 757 311 6 3 748 4 750 0.0 859
Msa0244100 AT2G19110.2 56.250 784 308 8 5 765 16 787 0.0 857
Msa0244100 AT2G19110.3 56.250 784 308 8 5 765 16 787 0.0 857
Msa0244100 AT2G19110.1 56.250 784 308 8 5 765 16 787 0.0 857
Msa0244100 AT4G30120.1 55.970 536 225 3 4 532 11 542 0.0 613
Msa0244100 AT4G30120.2 58.398 387 150 3 153 532 1 383 2.31e-160 471
Msa0244100 AT5G44790.1 29.216 753 419 17 10 662 211 949 6.48e-79 275
Msa0244100 AT1G63440.1 30.354 537 324 11 156 654 406 930 4.54e-70 249
Msa0244100 AT4G33520.2 31.012 603 349 12 156 704 348 937 2.33e-66 238
Msa0244100 AT4G33520.3 31.156 597 356 13 156 704 348 937 3.11e-66 238
Msa0244100 AT5G21930.2 28.918 619 371 16 110 662 221 836 1.06e-60 221
Msa0244100 AT5G21930.1 28.918 619 371 16 110 662 221 836 1.06e-60 221
Msa0244100 AT5G21930.4 29.302 587 346 16 110 630 221 804 4.99e-57 210
Msa0244100 AT4G37270.1 29.206 630 377 18 119 688 161 781 5.65e-54 201
Msa0244100 AT5G21930.3 28.595 619 350 17 110 662 221 813 1.96e-53 200
Msa0244100 AT5G57350.4 23.626 546 339 19 214 691 154 689 8.24e-18 89.0
Msa0244100 AT5G57350.2 23.626 546 339 19 214 691 154 689 8.24e-18 89.0
Msa0244100 AT5G57350.1 23.626 546 339 19 214 691 154 689 8.24e-18 89.0
Msa0244100 AT3G60330.4 23.370 552 344 17 204 683 146 690 2.74e-17 87.4
Msa0244100 AT3G60330.3 23.370 552 344 17 204 683 146 690 2.74e-17 87.4
Msa0244100 AT3G60330.2 23.370 552 344 17 204 683 146 690 2.96e-17 87.4
Msa0244100 AT3G60330.1 23.370 552 344 17 204 683 146 690 2.96e-17 87.4
Msa0244100 AT3G47950.1 23.260 546 341 17 214 691 161 696 7.58e-17 85.9
Msa0244100 AT3G47950.2 23.260 546 341 17 214 691 161 696 7.58e-17 85.9
Msa0244100 AT2G24520.3 22.486 547 344 18 214 691 135 670 2.08e-16 84.3
Msa0244100 AT2G24520.1 22.486 547 344 18 214 691 135 670 2.08e-16 84.3
Msa0244100 AT2G24520.2 22.486 547 344 18 214 691 198 733 2.12e-16 84.7
Msa0244100 AT1G80660.1 23.358 548 338 22 214 691 158 693 4.81e-16 83.2
Msa0244100 AT1G80660.3 23.358 548 338 22 214 691 158 693 4.98e-16 83.2
Msa0244100 AT1G80660.2 23.358 548 338 22 214 691 29 564 5.12e-16 83.2
Msa0244100 AT1G80660.4 23.358 548 338 22 214 691 158 693 5.16e-16 83.2
Msa0244100 AT1G17260.1 23.116 584 337 23 214 712 161 717 8.21e-16 82.4
Msa0244100 AT2G18960.1 23.260 546 341 18 214 691 153 688 9.93e-16 82.4
Msa0244100 AT2G18960.3 23.292 571 343 22 214 707 89 641 1.66e-15 81.6
Msa0244100 AT2G18960.2 23.292 571 343 22 214 707 89 641 1.66e-15 81.6
Msa0244100 AT5G62670.1 22.744 554 334 19 214 691 157 692 2.71e-15 80.9
Msa0244100 AT2G07560.1 23.146 553 332 19 214 691 156 690 4.04e-14 77.0
Msa0244100 AT1G07810.1 27.854 219 117 6 509 686 621 839 4.04e-14 77.0
Msa0244100 AT2G41560.2 31.447 159 83 4 506 638 538 696 4.82e-14 77.0
Msa0244100 AT2G41560.3 31.447 159 83 4 506 638 538 696 4.82e-14 77.0
Msa0244100 AT2G41560.4 31.447 159 83 4 506 638 538 696 4.82e-14 77.0
Msa0244100 AT2G41560.1 31.447 159 83 4 506 638 640 798 6.01e-14 76.6
Msa0244100 AT3G42640.1 21.681 678 398 22 99 691 62 691 7.60e-14 76.3
Msa0244100 AT3G21180.1 31.056 161 80 3 509 638 691 851 8.15e-14 76.3
Msa0244100 AT1G10130.1 24.427 262 154 8 494 712 567 827 8.41e-14 76.3
Msa0244100 AT3G57330.2 31.056 161 85 3 504 638 580 740 1.35e-13 75.5
Msa0244100 AT1G07670.2 27.397 219 118 6 509 686 621 839 1.53e-13 75.5
Msa0244100 AT1G07670.1 27.397 219 118 6 509 686 621 839 1.53e-13 75.5
Msa0244100 AT3G57330.1 31.056 161 85 3 504 638 635 795 1.55e-13 75.1
Msa0244100 AT4G00900.2 28.436 211 108 6 509 676 615 825 2.20e-13 74.7
Msa0244100 AT4G00900.1 28.436 211 108 6 509 676 615 825 2.20e-13 74.7
Msa0244100 AT5G57110.1 27.950 161 85 3 509 638 674 834 1.25e-12 72.4
Msa0244100 AT5G57110.3 27.950 161 85 3 509 638 674 834 1.25e-12 72.4
Msa0244100 AT5G57110.2 27.950 161 85 3 509 638 674 834 1.25e-12 72.4

Find 135 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCCCTAAAGTTCTATTT+AGG 0.130187 2_2:+22238310 Msa0244100:CDS
TACTCTTAATATCAACATTT+TGG 0.177691 2_2:+22238356 Msa0244100:CDS
GGTAATATTGATGAGGAAAA+AGG 0.221060 2_2:+22241839 Msa0244100:CDS
AAAGCCCTAAATAGAACTTT+AGG 0.262334 2_2:-22238315 None:intergenic
GACAAGTGAATCTGATTCTT+TGG 0.271282 2_2:-22239168 None:intergenic
TCAACCAAAGGTTGGAAATA+TGG 0.276728 2_2:+22241773 Msa0244100:CDS
CTTATTTCTGAGTCACAAAT+AGG 0.288449 2_2:+22237833 Msa0244100:CDS
ATTCCCTAAAGTTCTATTTA+GGG 0.294365 2_2:+22238311 Msa0244100:CDS
CATGCCATTGTAAGTATATC+TGG 0.312080 2_2:-22238207 None:intergenic
GAAGTATATATATCCTCCTT+TGG 0.321866 2_2:+22238257 Msa0244100:CDS
TGCAATTGCCAATGCAAGTA+TGG 0.322173 2_2:-22241639 None:intergenic
CTTGCTAAACGAATCGCTTC+AGG 0.323239 2_2:-22241560 None:intergenic
TTCAACAAGTCTTGACATTC+GGG 0.326874 2_2:-22239553 None:intergenic
CTTCAACAAGTCTTGACATT+CGG 0.332150 2_2:-22239554 None:intergenic
TTGTAGATCAGGTGCTTTAG+AGG 0.332991 2_2:+22241146 Msa0244100:CDS
TTGCAGGTTATCCATTAGTT+TGG 0.335285 2_2:+22241657 Msa0244100:CDS
AGATTCTAGCATTGCTACTT+TGG 0.341996 2_2:+22242045 Msa0244100:CDS
CCTTTGGGATGGTTGGCTCT+TGG 0.343324 2_2:+22238273 Msa0244100:CDS
TGAAACCATGGCTCCATATC+AGG 0.347039 2_2:-22240242 None:intergenic
GATGGTAATGATATCTATAT+AGG 0.347900 2_2:+22240849 Msa0244100:CDS
TTGCTTGTTAAGTAATGGTT+TGG 0.349064 2_2:-22241816 None:intergenic
TTTGCAAAGTACTATATTCC+TGG 0.353905 2_2:+22239621 Msa0244100:CDS
TGCATTAAGTGTTCCTGATA+TGG 0.359374 2_2:+22240229 Msa0244100:CDS
AAGAATCAGATTCACTTGTC+TGG 0.360703 2_2:+22239171 Msa0244100:CDS
TTTACCATATTTCCAACCTT+TGG 0.363775 2_2:-22241777 None:intergenic
GGCATATCAATGGGAATATC+TGG 0.363797 2_2:+22241476 Msa0244100:CDS
AAGTATATATATCCTCCTTT+GGG 0.370351 2_2:+22238258 Msa0244100:CDS
ATTAAGAGTAAGAGCTCTAA+TGG 0.372369 2_2:-22238343 None:intergenic
AAGCCCTAAATAGAACTTTA+GGG 0.378170 2_2:-22238314 None:intergenic
TGAGAACTCTCCTCTTGTTA+TGG 0.378498 2_2:-22240438 None:intergenic
CTTGTTGATGCTTGTAGATC+AGG 0.378715 2_2:+22241135 Msa0244100:CDS
CCATCTCCTATCATGGCTAT+TGG 0.379600 2_2:-22241416 None:intergenic
ATACTTGCATTGGCAATTGC+AGG 0.384606 2_2:+22241641 Msa0244100:CDS
GCTCTTGGTTCTGTTGCCAT+TGG 0.386825 2_2:+22238288 Msa0244100:CDS
CTATTTGTGACTCAGAAATA+AGG 0.391338 2_2:-22237832 None:intergenic
GGTGATGCTATTCCTCTTGA+TGG 0.398393 2_2:+22239080 Msa0244100:CDS
GAGAAGCAACTTTGAAGTGT+TGG 0.403762 2_2:+22237691 Msa0244100:CDS
ATTGAGAATTTCAAGAAAGA+AGG 0.407323 2_2:+22241392 Msa0244100:CDS
ATGGAAGAGCTGAAGTCATT+AGG 0.414538 2_2:+22241171 Msa0244100:CDS
AGAAGCAACTTTGAAGTGTT+GGG 0.415170 2_2:+22237692 Msa0244100:CDS
AGAATTCTGAAGCCTCTTCA+TGG 0.416439 2_2:+22237749 Msa0244100:CDS
ATATCCTCCTTTGGGATGGT+TGG 0.437705 2_2:+22238266 Msa0244100:CDS
AACAAACATGGCTCCTCAAA+TGG 0.438346 2_2:+22238983 Msa0244100:CDS
TAATTCTAGACAGTGTTTCA+AGG 0.450623 2_2:-22240388 None:intergenic
AGCAGACATCGGCATATCAA+TGG 0.451802 2_2:+22241466 Msa0244100:CDS
TTACCTTGCTTGTTAAGTAA+TGG 0.454151 2_2:-22241821 None:intergenic
CTCACAAAAGCTGCAATAAG+TGG 0.455717 2_2:+22240341 Msa0244100:CDS
ATGGCTATTGTTGCTGAGAC+CGG 0.458297 2_2:+22239002 Msa0244100:CDS
TGCCATGTATGTTCAGAGTC+AGG 0.462679 2_2:+22241233 Msa0244100:CDS
TCCACTAGTGCACCTGCCAC+TGG 0.469705 2_2:-22240738 None:intergenic
GAATCTGATTCTTTGGTGAC+CGG 0.472736 2_2:-22239161 None:intergenic
AAAACAGCTAGCCAAACTAA+TGG 0.474489 2_2:-22241668 None:intergenic
TCAGATTCACTTGTCTGGGC+TGG 0.474967 2_2:+22239176 Msa0244100:CDS
GAAGGGCCAATAGCCATGAT+AGG 0.478048 2_2:+22241410 Msa0244100:CDS
CGAGCTTCTACCACATGAAA+AGG 0.481888 2_2:+22241361 Msa0244100:CDS
GAGAATGTCATTATTTCAGT+TGG 0.482612 2_2:+22241605 Msa0244100:CDS
TGGCTATTGTTGCTGAGACC+GGG 0.484594 2_2:+22239003 Msa0244100:CDS
GTCAGATCAGTCATGCTGAC+AGG 0.495318 2_2:+22241195 Msa0244100:CDS
CAAATGTGCCATACTTGCAT+TGG 0.496220 2_2:+22241631 Msa0244100:CDS
ATCAGGTGCTTTAGAGGCAA+TGG 0.498112 2_2:+22241152 Msa0244100:CDS
GTTTCTTGGTAGAAATCTCA+TGG 0.500125 2_2:-22241077 None:intergenic
TGAGACAAGAGCAACTCATA+AGG 0.500504 2_2:+22238590 Msa0244100:CDS
GTTAATGCCATCTCCTATCA+TGG 0.502461 2_2:-22241423 None:intergenic
TCAAAGTTGAGTTTACTCAA+TGG 0.506061 2_2:+22241959 Msa0244100:CDS
AGAATCAGATTCACTTGTCT+GGG 0.506902 2_2:+22239172 Msa0244100:CDS
ACAATGAAACCTTACTGTAC+TGG 0.509660 2_2:+22240492 Msa0244100:CDS
TCAGGAACACTTAATGCAGC+TGG 0.510078 2_2:-22240224 None:intergenic
ACCATCCTTGCAGTCAAGGC+TGG 0.510481 2_2:+22239059 Msa0244100:CDS
TCCTCTTGATGGAATTGTTG+TGG 0.512231 2_2:+22239091 Msa0244100:CDS
CAACAAACATAAACTTTCCA+TGG 0.513388 2_2:-22241988 None:intergenic
ATTGACATCAACACGTTCCC+CGG 0.514951 2_2:-22239021 None:intergenic
GCAGACATCGGCATATCAAT+GGG 0.515459 2_2:+22241467 Msa0244100:CDS
GTTAACAGGAGAATCATTCC+CGG 0.517346 2_2:+22239142 Msa0244100:CDS
TTGAGAATTTCAAGAAAGAA+GGG 0.523815 2_2:+22241393 Msa0244100:CDS
ACCAGCCTTGACTGCAAGGA+TGG 0.526545 2_2:-22239060 None:intergenic
TATATAGGAAACAAGAGAGT+TGG 0.528816 2_2:+22240864 Msa0244100:CDS
TCATTATTGGTCTCTCCTTG+TGG 0.530580 2_2:-22238174 None:intergenic
GTCAGAGCTATATGTAAAAG+AGG 0.530799 2_2:+22240888 Msa0244100:CDS
TCCAGTGGCAGGTGCACTAG+TGG 0.531604 2_2:+22240737 Msa0244100:CDS
AAAGAGAATCAACCAAAGGT+TGG 0.535439 2_2:+22241765 Msa0244100:CDS
ATGTCTGCTGTAGCTAATGC+AGG 0.535705 2_2:-22241452 None:intergenic
CAGAAATAAGGAGAACATCA+TGG 0.536453 2_2:-22237820 None:intergenic
ATGGTTTCATCTAGCACTTG+TGG 0.538419 2_2:+22240256 Msa0244100:CDS
GCTGGAACTATTAATATGAA+TGG 0.542182 2_2:+22239194 Msa0244100:CDS
GAACACCATCCTTGCAGTCA+AGG 0.543189 2_2:+22239055 Msa0244100:CDS
AGAGCACAAAAGATTGCAAC+TGG 0.543642 2_2:-22240320 None:intergenic
AATTGTGGAGAAACTCTAGT+TGG 0.544389 2_2:+22241102 Msa0244100:CDS
AAATCAAGTCATCCAGTGGC+AGG 0.547267 2_2:+22240726 Msa0244100:CDS
TTGTGCAACAGAAGCATCAC+TGG 0.556014 2_2:+22237721 Msa0244100:CDS
CATCACCAGCCTTGACTGCA+AGG 0.558354 2_2:-22239064 None:intergenic
GATTTCAGCTAGCATTGCAG+TGG 0.558685 2_2:+22240199 Msa0244100:CDS
CAAACCAGTACCAGAAAATG+TGG 0.561124 2_2:+22240782 Msa0244100:CDS
GGCTATTGTTGCTGAGACCG+GGG 0.564489 2_2:+22239004 Msa0244100:CDS
AATCTGATTCTTTGGTGACC+GGG 0.566418 2_2:-22239160 None:intergenic
ACAAGAAAAGATGAATCTTG+TGG 0.567250 2_2:+22241932 Msa0244100:CDS
TTCTGTTCTCTATTGCTCAG+TGG 0.567993 2_2:+22238565 Msa0244100:CDS
ATAAGTGGATTACTATTGAA+AGG 0.569583 2_2:+22240356 Msa0244100:CDS
CCAATAGCCATGATAGGAGA+TGG 0.570907 2_2:+22241416 Msa0244100:CDS
TCCACAACAATTCCATCAAG+AGG 0.572437 2_2:-22239092 None:intergenic
ATATATATCCTCCTTTGGGA+TGG 0.576773 2_2:+22238262 Msa0244100:CDS
GTGTTCCTGATATGGAGCCA+TGG 0.579497 2_2:+22240237 Msa0244100:CDS
TCAGCAACAATAGCCATTTG+AGG 0.581659 2_2:-22238996 None:intergenic
TACCTGACTCTGAACATACA+TGG 0.589939 2_2:-22241235 None:intergenic
GAAAACCTACCAGTACAGTA+AGG 0.591584 2_2:-22240501 None:intergenic
TCTACCAAGAAACAAAATTG+TGG 0.594583 2_2:+22241087 Msa0244100:CDS
ACAGCTTTGACTCCATGAAG+AGG 0.594671 2_2:-22237761 None:intergenic
CTTGATGGAATTGTTGTGGA+AGG 0.598010 2_2:+22239095 Msa0244100:CDS
CTGATCTACAAGCATCAACA+AGG 0.601748 2_2:-22241134 None:intergenic
CAAGCAAGGTAATATTGATG+AGG 0.619230 2_2:+22241832 Msa0244100:CDS
AAAACAGGCACCATAACAAG+AGG 0.622472 2_2:+22240428 Msa0244100:CDS
AAGTGTAAGAACAACTGTGT+TGG 0.622963 2_2:+22239512 Msa0244100:CDS
AGTGGATTACTATTGAAAGG+TGG 0.625372 2_2:+22240359 Msa0244100:CDS
GTAGAGAGGATAAGAGCACA+AGG 0.625381 2_2:-22240296 None:intergenic
AAACCATTACTTAACAAGCA+AGG 0.626884 2_2:+22241818 Msa0244100:CDS
CCAAGAGCCAACCATCCCAA+AGG 0.627193 2_2:-22238273 None:intergenic
TTACTCAATGGAAATGACCA+TGG 0.628584 2_2:+22241971 Msa0244100:CDS
GTGCACTAGTGGATTATGCA+AGG 0.630355 2_2:+22240748 Msa0244100:CDS
ATGTCCAGATATACTTACAA+TGG 0.632108 2_2:+22238203 Msa0244100:CDS
ACAACAGTAACTGTTCGAGC+AGG 0.633676 2_2:-22237797 None:intergenic
TAGAACTTTAGGGAATCCAA+TGG 0.634958 2_2:-22238304 None:intergenic
GAAGAAAGAGAATCAACCAA+AGG 0.636925 2_2:+22241761 Msa0244100:CDS
GCATTAGCTACAGCAGACAT+CGG 0.650450 2_2:+22241455 Msa0244100:CDS
AGAGCCAACCATCCCAAAGG+AGG 0.660926 2_2:-22238270 None:intergenic
AGATTGCAACTGGTGTAGAG+AGG 0.664129 2_2:-22240310 None:intergenic
AATGTCGTCTTTAACAAACA+TGG 0.667117 2_2:+22238971 Msa0244100:CDS
AAGTAAGCATGTTCCAACAT+CGG 0.668314 2_2:-22241693 None:intergenic
CGGATGCACTGAATACAGCA+AGG 0.674306 2_2:+22238133 Msa0244100:CDS
ACAAGTGCTAGATGAAACCA+TGG 0.685244 2_2:-22240254 None:intergenic
GATATACTTACAATGGCATG+CGG 0.693837 2_2:+22238210 Msa0244100:CDS
GAGTAAATCAAGTCATCCAG+TGG 0.696182 2_2:+22240722 Msa0244100:CDS
CTTCTTAGTAGTGAAGAGTG+TGG 0.712204 2_2:+22241863 Msa0244100:CDS
GAATCTTGTATCATAACACA+AGG 0.715496 2_2:-22242028 None:intergenic
TAGAGAGGATAAGAGCACAA+GGG 0.729183 2_2:-22240295 None:intergenic
ACTGTCTAGAATTAAGACAG+TGG 0.732446 2_2:+22240397 Msa0244100:CDS
TGTGTTGGCGAAAGACACAA+TGG 0.738132 2_2:+22239527 Msa0244100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAACTATAAGAAAATAT+TGG + chr2_2:22238889-22238908 Msa0244100:intron 10.0%
!!! GATACAAATTTTTTCTTAAA+AGG - chr2_2:22240032-22240051 None:intergenic 15.0%
!! AACATGAATTTGTATATCTT+AGG + chr2_2:22237893-22237912 Msa0244100:intron 20.0%
!! ACATGAATTTGTATATCTTA+GGG + chr2_2:22237894-22237913 Msa0244100:intron 20.0%
!!! TCATAATTTACTTTGTTTCT+TGG + chr2_2:22237973-22237992 Msa0244100:intron 20.0%
!!! TACTCTTAATATCAACATTT+TGG + chr2_2:22238356-22238375 Msa0244100:CDS 20.0%
!!! TATCAACATTTTGGTTTTAT+TGG + chr2_2:22238365-22238384 Msa0244100:CDS 20.0%
!! ATGAATGTAATAATGTAACA+AGG - chr2_2:22238938-22238957 None:intergenic 20.0%
!! TGTTACATTATTACATTCAT+AGG + chr2_2:22238938-22238957 Msa0244100:intron 20.0%
!!! GATAATTGTGAGAAAAATTT+TGG - chr2_2:22239309-22239328 None:intergenic 20.0%
!! TAAATAATGAGTCTGATTAA+TGG + chr2_2:22240108-22240127 Msa0244100:intron 20.0%
!! AAATAATGAGTCTGATTAAT+GGG + chr2_2:22240109-22240128 Msa0244100:intron 20.0%
!! AATAAGCTGAAAATAGTTTA+TGG + chr2_2:22240533-22240552 Msa0244100:intron 20.0%
!! AATTTGGTTAATGAAAACTT+TGG + chr2_2:22240681-22240700 Msa0244100:intron 20.0%
!!! AGAATTTTCAAAATTTTCCA+GGG + chr2_2:22240805-22240824 Msa0244100:CDS 20.0%
!!! TTGGAAATATGGTAAATTTT+TGG + chr2_2:22241784-22241803 Msa0244100:CDS 20.0%
! TATTTATGTGATTGTTTCAG+CGG + chr2_2:22238113-22238132 Msa0244100:intron 25.0%
!! TGGACATTTCTTTTCATTAT+TGG - chr2_2:22238190-22238209 None:intergenic 25.0%
! AAGTATATATATCCTCCTTT+GGG + chr2_2:22238258-22238277 Msa0244100:CDS 25.0%
! ATTCCCTAAAGTTCTATTTA+GGG + chr2_2:22238311-22238330 Msa0244100:CDS 25.0%
! TAAAGAAAACATGTTTGCAT+TGG + chr2_2:22238439-22238458 Msa0244100:intron 25.0%
! TACATTAACGACATAAAGTT+TGG - chr2_2:22238696-22238715 None:intergenic 25.0%
! AGTACATTAATATAGCAAGA+AGG - chr2_2:22238724-22238743 None:intergenic 25.0%
! ACATTAATATGCACACTAAA+AGG - chr2_2:22238810-22238829 None:intergenic 25.0%
! ATTATTACATTCATAGGCAA+TGG + chr2_2:22238944-22238963 Msa0244100:intron 25.0%
!! GTTGATGAAAAAATGTTAAC+AGG + chr2_2:22239128-22239147 Msa0244100:CDS 25.0%
!! GTTAAGTATCTTAGAACTTT+TGG + chr2_2:22239216-22239235 Msa0244100:intron 25.0%
! GATGAAATATAAGGATAACT+AGG - chr2_2:22239423-22239442 None:intergenic 25.0%
! TGTGATAGAGATGAAATATA+AGG - chr2_2:22239432-22239451 None:intergenic 25.0%
!!! TTTTGAGTACATATCATTTC+AGG + chr2_2:22239483-22239502 Msa0244100:intron 25.0%
! TATCCTTGGATTAATAAACA+TGG + chr2_2:22239667-22239686 Msa0244100:intron 25.0%
! TGATTACCAAAAACAAATCA+TGG - chr2_2:22239806-22239825 None:intergenic 25.0%
! TAGAAAAAATGTGATTGGAA+GGG - chr2_2:22239913-22239932 None:intergenic 25.0%
! ATAGAAAAAATGTGATTGGA+AGG - chr2_2:22239914-22239933 None:intergenic 25.0%
!! GTTGATAGAAAAAATGTGAT+TGG - chr2_2:22239918-22239937 None:intergenic 25.0%
! ATGTTTATATTGTATTGCAG+TGG + chr2_2:22240169-22240188 Msa0244100:intron 25.0%
!!! ATAAGTGGATTACTATTGAA+AGG + chr2_2:22240356-22240375 Msa0244100:CDS 25.0%
!! CTTTGAAGACTAACTTAATT+TGG + chr2_2:22240665-22240684 Msa0244100:intron 25.0%
!! GAGAATTTTCAAAATTTTCC+AGG + chr2_2:22240804-22240823 Msa0244100:CDS 25.0%
!! GAATTTTCAAAATTTTCCAG+GGG + chr2_2:22240806-22240825 Msa0244100:CDS 25.0%
!! GATGGTAATGATATCTATAT+AGG + chr2_2:22240849-22240868 Msa0244100:CDS 25.0%
! ATTCACAACTTAATTCTTGA+AGG + chr2_2:22240918-22240937 Msa0244100:intron 25.0%
! TATAGCATTGTTTAACTGAA+AGG - chr2_2:22241327-22241346 None:intergenic 25.0%
! ATTGAGAATTTCAAGAAAGA+AGG + chr2_2:22241392-22241411 Msa0244100:CDS 25.0%
! TTGAGAATTTCAAGAAAGAA+GGG + chr2_2:22241393-22241412 Msa0244100:CDS 25.0%
! GTAATATTGATGAGGAAAAA+GGG + chr2_2:22241840-22241859 Msa0244100:CDS 25.0%
! TAAAAATGTTACTCATCATG+TGG + chr2_2:22241898-22241917 Msa0244100:CDS 25.0%
CTATTTGTGACTCAGAAATA+AGG - chr2_2:22237835-22237854 None:intergenic 30.0%
!! CTTATTTCTGAGTCACAAAT+AGG + chr2_2:22237833-22237852 Msa0244100:CDS 30.0%
ATGTCCAGATATACTTACAA+TGG + chr2_2:22238203-22238222 Msa0244100:CDS 30.0%
GAAGTATATATATCCTCCTT+TGG + chr2_2:22238257-22238276 Msa0244100:CDS 30.0%
GATTCCCTAAAGTTCTATTT+AGG + chr2_2:22238310-22238329 Msa0244100:CDS 30.0%
AAGCCCTAAATAGAACTTTA+GGG - chr2_2:22238317-22238336 None:intergenic 30.0%
AAAGCCCTAAATAGAACTTT+AGG - chr2_2:22238318-22238337 None:intergenic 30.0%
! ATTAAGAGTAAGAGCTCTAA+TGG - chr2_2:22238346-22238365 None:intergenic 30.0%
!!! AACATTTTGGTTTTATTGGC+AGG + chr2_2:22238369-22238388 Msa0244100:CDS 30.0%
TTTCAGACGTTTGTAGAAAA+TGG - chr2_2:22238397-22238416 None:intergenic 30.0%
! GCTTTACAAGATTTTACAGA+TGG + chr2_2:22238528-22238547 Msa0244100:CDS 30.0%
! TTACAAGATTTTACAGATGG+TGG + chr2_2:22238531-22238550 Msa0244100:CDS 30.0%
TGGTATTAATCGAGTAATGA+AGG - chr2_2:22238676-22238695 None:intergenic 30.0%
AATATGCACACTAAAAGGTT+TGG - chr2_2:22238805-22238824 None:intergenic 30.0%
AATGTCGTCTTTAACAAACA+TGG + chr2_2:22238971-22238990 Msa0244100:CDS 30.0%
GCTGGAACTATTAATATGAA+TGG + chr2_2:22239194-22239213 Msa0244100:CDS 30.0%
! AACCCAGAATCAACATTTTA+AGG + chr2_2:22239343-22239362 Msa0244100:intron 30.0%
!! CACCTTAAAATGTTGATTCT+GGG - chr2_2:22239348-22239367 None:intergenic 30.0%
!! ACACCTTAAAATGTTGATTC+TGG - chr2_2:22239349-22239368 None:intergenic 30.0%
! TTTGCAAAGTACTATATTCC+TGG + chr2_2:22239621-22239640 Msa0244100:CDS 30.0%
!!! TCAGAACCATGATTTGTTTT+TGG + chr2_2:22239797-22239816 Msa0244100:intron 30.0%
AGAAAAAATGTGATTGGAAG+GGG - chr2_2:22239912-22239931 None:intergenic 30.0%
TTCTGATACCAACATTACAT+TGG - chr2_2:22240002-22240021 None:intergenic 30.0%
TAATTCTAGACAGTGTTTCA+AGG - chr2_2:22240391-22240410 None:intergenic 30.0%
! TACTGGTAGGTTTTCATTTA+CGG + chr2_2:22240509-22240528 Msa0244100:intron 30.0%
! TAAACACTTTAGAGAGTTCA+AGG - chr2_2:22240577-22240596 None:intergenic 30.0%
TGGTTAATGAAAACTTTGGT+AGG + chr2_2:22240685-22240704 Msa0244100:intron 30.0%
! TGAAAATTCTCCACATTTTC+TGG - chr2_2:22240795-22240814 None:intergenic 30.0%
!!! GGAATTTTTGGTACAATTGA+TGG + chr2_2:22240831-22240850 Msa0244100:CDS 30.0%
TATATAGGAAACAAGAGAGT+TGG + chr2_2:22240864-22240883 Msa0244100:CDS 30.0%
TCTACCAAGAAACAAAATTG+TGG + chr2_2:22241087-22241106 Msa0244100:CDS 30.0%
!! TTCTCCACAATTTTGTTTCT+TGG - chr2_2:22241094-22241113 None:intergenic 30.0%
GAGAATGTCATTATTTCAGT+TGG + chr2_2:22241605-22241624 Msa0244100:CDS 30.0%
TTTACCATATTTCCAACCTT+TGG - chr2_2:22241780-22241799 None:intergenic 30.0%
! TTGCTTGTTAAGTAATGGTT+TGG - chr2_2:22241819-22241838 None:intergenic 30.0%
AAACCATTACTTAACAAGCA+AGG + chr2_2:22241818-22241837 Msa0244100:CDS 30.0%
! TTACCTTGCTTGTTAAGTAA+TGG - chr2_2:22241824-22241843 None:intergenic 30.0%
GGTAATATTGATGAGGAAAA+AGG + chr2_2:22241839-22241858 Msa0244100:CDS 30.0%
ACAAGAAAAGATGAATCTTG+TGG + chr2_2:22241932-22241951 Msa0244100:CDS 30.0%
TCAAAGTTGAGTTTACTCAA+TGG + chr2_2:22241959-22241978 Msa0244100:CDS 30.0%
CAACAAACATAAACTTTCCA+TGG - chr2_2:22241991-22242010 None:intergenic 30.0%
GAATCTTGTATCATAACACA+AGG - chr2_2:22242031-22242050 None:intergenic 30.0%
!! AGAAGCAACTTTGAAGTGTT+GGG + chr2_2:22237692-22237711 Msa0244100:CDS 35.0%
CAGAAATAAGGAGAACATCA+TGG - chr2_2:22237823-22237842 None:intergenic 35.0%
!!! GTTGACTTTTTTCTGTGTGA+TGG + chr2_2:22237949-22237968 Msa0244100:intron 35.0%
! TTGTTTCTTGGATTCATGTG+TGG + chr2_2:22237985-22238004 Msa0244100:intron 35.0%
CATGCCATTGTAAGTATATC+TGG - chr2_2:22238210-22238229 None:intergenic 35.0%
GATATACTTACAATGGCATG+CGG + chr2_2:22238210-22238229 Msa0244100:CDS 35.0%
! ATATATATCCTCCTTTGGGA+TGG + chr2_2:22238262-22238281 Msa0244100:CDS 35.0%
! TAGAACTTTAGGGAATCCAA+TGG - chr2_2:22238307-22238326 None:intergenic 35.0%
AGAAAACATGTTTGCATTGG+TGG + chr2_2:22238442-22238461 Msa0244100:intron 35.0%
TCATCATATGTTGCAGTATG+TGG + chr2_2:22238498-22238517 Msa0244100:intron 35.0%
TACTCTTGCTTCTTGCTTAA+GGG + chr2_2:22238766-22238785 Msa0244100:intron 35.0%
GTGTGCATATTAATGTACTC+CGG + chr2_2:22238814-22238833 Msa0244100:intron 35.0%
GACAAGTGAATCTGATTCTT+TGG - chr2_2:22239171-22239190 None:intergenic 35.0%
AAGAATCAGATTCACTTGTC+TGG + chr2_2:22239171-22239190 Msa0244100:CDS 35.0%
AGAATCAGATTCACTTGTCT+GGG + chr2_2:22239172-22239191 Msa0244100:CDS 35.0%
AAGTGTAAGAACAACTGTGT+TGG + chr2_2:22239512-22239531 Msa0244100:CDS 35.0%
TTCAACAAGTCTTGACATTC+GGG - chr2_2:22239556-22239575 None:intergenic 35.0%
CTTCAACAAGTCTTGACATT+CGG - chr2_2:22239557-22239576 None:intergenic 35.0%
AATCCAAGGATAAACATCCA+TGG - chr2_2:22239659-22239678 None:intergenic 35.0%
CCACCATGTTTATTAATCCA+AGG - chr2_2:22239673-22239692 None:intergenic 35.0%
CCTTGGATTAATAAACATGG+TGG + chr2_2:22239670-22239689 Msa0244100:intron 35.0%
TGAAAAGTCCACATTACATC+CGG + chr2_2:22239718-22239737 Msa0244100:intron 35.0%
!! AAATCATGGTTCTGAATCGA+GGG - chr2_2:22239792-22239811 None:intergenic 35.0%
TTATTCACCAACTTTGCCAA+TGG + chr2_2:22239840-22239859 Msa0244100:intron 35.0%
AGTTCATTCACATTGTGTCA+GGG + chr2_2:22239953-22239972 Msa0244100:intron 35.0%
!! CAACATTACATTGGTTCAAG+TGG - chr2_2:22239993-22240012 None:intergenic 35.0%
CACTTGAACCAATGTAATGT+TGG + chr2_2:22239991-22240010 Msa0244100:intron 35.0%
TGCATTAAGTGTTCCTGATA+TGG + chr2_2:22240229-22240248 Msa0244100:CDS 35.0%
!! AGTGGATTACTATTGAAAGG+TGG + chr2_2:22240359-22240378 Msa0244100:CDS 35.0%
! ACTGTCTAGAATTAAGACAG+TGG + chr2_2:22240397-22240416 Msa0244100:CDS 35.0%
! ACAGTGGCTTTTGATAAAAC+AGG + chr2_2:22240413-22240432 Msa0244100:CDS 35.0%
!! TCAGTAACAGATTTTAGTGC+TGG + chr2_2:22240458-22240477 Msa0244100:CDS 35.0%
ACAATGAAACCTTACTGTAC+TGG + chr2_2:22240492-22240511 Msa0244100:CDS 35.0%
AATTGATCTCCTGACTCAAA+GGG - chr2_2:22240638-22240657 None:intergenic 35.0%
AAATTGATCTCCTGACTCAA+AGG - chr2_2:22240639-22240658 None:intergenic 35.0%
! TTTCAAAATTTTCCAGGGGA+AGG + chr2_2:22240810-22240829 Msa0244100:CDS 35.0%
GTCAGAGCTATATGTAAAAG+AGG + chr2_2:22240888-22240907 Msa0244100:CDS 35.0%
GTTTCTTGGTAGAAATCTCA+TGG - chr2_2:22241080-22241099 None:intergenic 35.0%
AATTGTGGAGAAACTCTAGT+TGG + chr2_2:22241102-22241121 Msa0244100:CDS 35.0%
! ATGAGTTTTGCCTTTTCATG+TGG - chr2_2:22241374-22241393 None:intergenic 35.0%
TTGCAGGTTATCCATTAGTT+TGG + chr2_2:22241657-22241676 Msa0244100:CDS 35.0%
AAAACAGCTAGCCAAACTAA+TGG - chr2_2:22241671-22241690 None:intergenic 35.0%
AAGTAAGCATGTTCCAACAT+CGG - chr2_2:22241696-22241715 None:intergenic 35.0%
GAAGAAAGAGAATCAACCAA+AGG + chr2_2:22241761-22241780 Msa0244100:CDS 35.0%
AAAGAGAATCAACCAAAGGT+TGG + chr2_2:22241765-22241784 Msa0244100:CDS 35.0%
TCAACCAAAGGTTGGAAATA+TGG + chr2_2:22241773-22241792 Msa0244100:CDS 35.0%
CAAGCAAGGTAATATTGATG+AGG + chr2_2:22241832-22241851 Msa0244100:CDS 35.0%
TTACTCAATGGAAATGACCA+TGG + chr2_2:22241971-22241990 Msa0244100:CDS 35.0%
! AGATTCTAGCATTGCTACTT+TGG + chr2_2:22242045-22242064 Msa0244100:CDS 35.0%
!! GAGAAGCAACTTTGAAGTGT+TGG + chr2_2:22237691-22237710 Msa0244100:CDS 40.0%
!! AGAATTCTGAAGCCTCTTCA+TGG + chr2_2:22237749-22237768 Msa0244100:CDS 40.0%
!!! GAAGCTAGTTTTAGACCACA+AGG + chr2_2:22238159-22238178 Msa0244100:CDS 40.0%
! TCATTATTGGTCTCTCCTTG+TGG - chr2_2:22238177-22238196 None:intergenic 40.0%
TTCTGTTCTCTATTGCTCAG+TGG + chr2_2:22238565-22238584 Msa0244100:CDS 40.0%
TGAGACAAGAGCAACTCATA+AGG + chr2_2:22238590-22238609 Msa0244100:CDS 40.0%
AGAAAGAAAACACAGCGACA+AGG - chr2_2:22238642-22238661 None:intergenic 40.0%
GTACTCTTGCTTCTTGCTTA+AGG + chr2_2:22238765-22238784 Msa0244100:intron 40.0%
AACAAACATGGCTCCTCAAA+TGG + chr2_2:22238983-22239002 Msa0244100:CDS 40.0%
TCAGCAACAATAGCCATTTG+AGG - chr2_2:22238999-22239018 None:intergenic 40.0%
TCCTCTTGATGGAATTGTTG+TGG + chr2_2:22239091-22239110 Msa0244100:CDS 40.0%
TCCACAACAATTCCATCAAG+AGG - chr2_2:22239095-22239114 None:intergenic 40.0%
CTTGATGGAATTGTTGTGGA+AGG + chr2_2:22239095-22239114 Msa0244100:CDS 40.0%
GTTAACAGGAGAATCATTCC+CGG + chr2_2:22239142-22239161 Msa0244100:CDS 40.0%
! AATCTGATTCTTTGGTGACC+GGG - chr2_2:22239163-22239182 None:intergenic 40.0%
! GAATCTGATTCTTTGGTGAC+CGG - chr2_2:22239164-22239183 None:intergenic 40.0%
TGTCCATGGATGTTTATCCT+TGG + chr2_2:22239653-22239672 Msa0244100:intron 40.0%
CACTAATACCGGATGTAATG+TGG - chr2_2:22239729-22239748 None:intergenic 40.0%
CATTACATCCGGTATTAGTG+TGG + chr2_2:22239729-22239748 Msa0244100:intron 40.0%
!! CAAATCATGGTTCTGAATCG+AGG - chr2_2:22239793-22239812 None:intergenic 40.0%
! AGATTAGCCATTGGCAAAGT+TGG - chr2_2:22239850-22239869 None:intergenic 40.0%
GAGTTCATTCACATTGTGTC+AGG + chr2_2:22239952-22239971 Msa0244100:intron 40.0%
!! TACATTGGTTCAAGTGGAAC+TGG - chr2_2:22239987-22240006 None:intergenic 40.0%
ACAAGTGCTAGATGAAACCA+TGG - chr2_2:22240257-22240276 None:intergenic 40.0%
ATGGTTTCATCTAGCACTTG+TGG + chr2_2:22240256-22240275 Msa0244100:CDS 40.0%
!!! GCACTTGTGGTTTTATTGAG+TGG + chr2_2:22240269-22240288 Msa0244100:CDS 40.0%
! TAGAGAGGATAAGAGCACAA+GGG - chr2_2:22240298-22240317 None:intergenic 40.0%
AGAGCACAAAAGATTGCAAC+TGG - chr2_2:22240323-22240342 None:intergenic 40.0%
CTCACAAAAGCTGCAATAAG+TGG + chr2_2:22240341-22240360 Msa0244100:CDS 40.0%
AAAACAGGCACCATAACAAG+AGG + chr2_2:22240428-22240447 Msa0244100:CDS 40.0%
TGAGAACTCTCCTCTTGTTA+TGG - chr2_2:22240441-22240460 None:intergenic 40.0%
! TGAAACCTTACTGTACTGGT+AGG + chr2_2:22240496-22240515 Msa0244100:intron 40.0%
GAAAACCTACCAGTACAGTA+AGG - chr2_2:22240504-22240523 None:intergenic 40.0%
GAGTAAATCAAGTCATCCAG+TGG + chr2_2:22240722-22240741 Msa0244100:CDS 40.0%
CAAACCAGTACCAGAAAATG+TGG + chr2_2:22240782-22240801 Msa0244100:CDS 40.0%
!! TTCTCCACATTTTCTGGTAC+TGG - chr2_2:22240789-22240808 None:intergenic 40.0%
! TTTCCAGGGGAAGGAATTTT+TGG + chr2_2:22240819-22240838 Msa0244100:CDS 40.0%
CTGATCTACAAGCATCAACA+AGG - chr2_2:22241137-22241156 None:intergenic 40.0%
CTTGTTGATGCTTGTAGATC+AGG + chr2_2:22241135-22241154 Msa0244100:CDS 40.0%
TTGTAGATCAGGTGCTTTAG+AGG + chr2_2:22241146-22241165 Msa0244100:CDS 40.0%
ATGGAAGAGCTGAAGTCATT+AGG + chr2_2:22241171-22241190 Msa0244100:CDS 40.0%
TACCTGACTCTGAACATACA+TGG - chr2_2:22241238-22241257 None:intergenic 40.0%
! CTTTTCATGTGGTAGAAGCT+CGG - chr2_2:22241363-22241382 None:intergenic 40.0%
GTTAATGCCATCTCCTATCA+TGG - chr2_2:22241426-22241445 None:intergenic 40.0%
GGCATATCAATGGGAATATC+TGG + chr2_2:22241476-22241495 Msa0244100:CDS 40.0%
! GAATCGCTTCAGGTACTTTT+CGG - chr2_2:22241553-22241572 None:intergenic 40.0%
CAAATGTGCCATACTTGCAT+TGG + chr2_2:22241631-22241650 Msa0244100:CDS 40.0%
TGCAATTGCCAATGCAAGTA+TGG - chr2_2:22241642-22241661 None:intergenic 40.0%
! ATACTTGCATTGGCAATTGC+AGG + chr2_2:22241641-22241660 Msa0244100:CDS 40.0%
!!! CTAGCTGTTTTAACCGATGT+TGG + chr2_2:22241680-22241699 Msa0244100:CDS 40.0%
CTTCTTAGTAGTGAAGAGTG+TGG + chr2_2:22241863-22241882 Msa0244100:CDS 40.0%
!! TTGTGCAACAGAAGCATCAC+TGG + chr2_2:22237721-22237740 Msa0244100:CDS 45.0%
! ACAGCTTTGACTCCATGAAG+AGG - chr2_2:22237764-22237783 None:intergenic 45.0%
ACAACAGTAACTGTTCGAGC+AGG - chr2_2:22237800-22237819 None:intergenic 45.0%
!! ATATCCTCCTTTGGGATGGT+TGG + chr2_2:22238266-22238285 Msa0244100:CDS 45.0%
TACTCCGGCTTCTTGCTTTA+GGG + chr2_2:22238829-22238848 Msa0244100:intron 45.0%
TTTCCCCTAAAGCAAGAAGC+CGG - chr2_2:22238836-22238855 None:intergenic 45.0%
ATGGCTATTGTTGCTGAGAC+CGG + chr2_2:22239002-22239021 Msa0244100:CDS 45.0%
ATTGACATCAACACGTTCCC+CGG - chr2_2:22239024-22239043 None:intergenic 45.0%
GGTGATGCTATTCCTCTTGA+TGG + chr2_2:22239080-22239099 Msa0244100:CDS 45.0%
! TGTGTTGGCGAAAGACACAA+TGG + chr2_2:22239527-22239546 Msa0244100:CDS 45.0%
TGCATGTGCCACACTAATAC+CGG - chr2_2:22239740-22239759 None:intergenic 45.0%
GATTTCAGCTAGCATTGCAG+TGG + chr2_2:22240199-22240218 Msa0244100:CDS 45.0%
TCAGGAACACTTAATGCAGC+TGG - chr2_2:22240227-22240246 None:intergenic 45.0%
TGAAACCATGGCTCCATATC+AGG - chr2_2:22240245-22240264 None:intergenic 45.0%
! GTAGAGAGGATAAGAGCACA+AGG - chr2_2:22240299-22240318 None:intergenic 45.0%
AGATTGCAACTGGTGTAGAG+AGG - chr2_2:22240313-22240332 None:intergenic 45.0%
AAATCAAGTCATCCAGTGGC+AGG + chr2_2:22240726-22240745 Msa0244100:CDS 45.0%
!! GTGCACTAGTGGATTATGCA+AGG + chr2_2:22240748-22240767 Msa0244100:CDS 45.0%
GTACCAAAAATTCCTTCCCC+TGG - chr2_2:22240825-22240844 None:intergenic 45.0%
!! ATCAGGTGCTTTAGAGGCAA+TGG + chr2_2:22241152-22241171 Msa0244100:CDS 45.0%
TGCCATGTATGTTCAGAGTC+AGG + chr2_2:22241233-22241252 Msa0244100:CDS 45.0%
CGAGCTTCTACCACATGAAA+AGG + chr2_2:22241361-22241380 Msa0244100:CDS 45.0%
CCATCTCCTATCATGGCTAT+TGG - chr2_2:22241419-22241438 None:intergenic 45.0%
CCAATAGCCATGATAGGAGA+TGG + chr2_2:22241416-22241435 Msa0244100:CDS 45.0%
ATGTCTGCTGTAGCTAATGC+AGG - chr2_2:22241455-22241474 None:intergenic 45.0%
GCATTAGCTACAGCAGACAT+CGG + chr2_2:22241455-22241474 Msa0244100:CDS 45.0%
AGCAGACATCGGCATATCAA+TGG + chr2_2:22241466-22241485 Msa0244100:CDS 45.0%
GCAGACATCGGCATATCAAT+GGG + chr2_2:22241467-22241486 Msa0244100:CDS 45.0%
CTTGCTAAACGAATCGCTTC+AGG - chr2_2:22241563-22241582 None:intergenic 45.0%
CGGATGCACTGAATACAGCA+AGG + chr2_2:22238133-22238152 Msa0244100:CDS 50.0%
!! GCTCTTGGTTCTGTTGCCAT+TGG + chr2_2:22238288-22238307 Msa0244100:CDS 50.0%
GTACTCCGGCTTCTTGCTTT+AGG + chr2_2:22238828-22238847 Msa0244100:intron 50.0%
ACTCCGGCTTCTTGCTTTAG+GGG + chr2_2:22238830-22238849 Msa0244100:intron 50.0%
TGGCTATTGTTGCTGAGACC+GGG + chr2_2:22239003-22239022 Msa0244100:CDS 50.0%
GAACACCATCCTTGCAGTCA+AGG + chr2_2:22239055-22239074 Msa0244100:CDS 50.0%
TCAGATTCACTTGTCTGGGC+TGG + chr2_2:22239176-22239195 Msa0244100:CDS 50.0%
CCATGGACATGACACATACC+AGG - chr2_2:22239642-22239661 None:intergenic 50.0%
CCTGGTATGTGTCATGTCCA+TGG + chr2_2:22239639-22239658 Msa0244100:intron 50.0%
! CATGCAGCAGAAGCATAGTG+AGG + chr2_2:22239754-22239773 Msa0244100:intron 50.0%
! TGAATCGAGGGCATGTCAGT+CGG - chr2_2:22239780-22239799 None:intergenic 50.0%
TGCCAATGGCTAATCTCCTC+TGG + chr2_2:22239854-22239873 Msa0244100:intron 50.0%
GCCAATGGCTAATCTCCTCT+GGG + chr2_2:22239855-22239874 Msa0244100:intron 50.0%
CCAATGGCTAATCTCCTCTG+GGG + chr2_2:22239856-22239875 Msa0244100:intron 50.0%
ACCTCCTTGGCCACCATTAT+TGG + chr2_2:22239880-22239899 Msa0244100:intron 50.0%
CCTCCTTGGCCACCATTATT+GGG + chr2_2:22239881-22239900 Msa0244100:intron 50.0%
CTCCTTGGCCACCATTATTG+GGG + chr2_2:22239882-22239901 Msa0244100:intron 50.0%
TCCTTGGCCACCATTATTGG+GGG + chr2_2:22239883-22239902 Msa0244100:intron 50.0%
GAAGGGGATACCCCCAATAA+TGG - chr2_2:22239896-22239915 None:intergenic 50.0%
GTGTTCCTGATATGGAGCCA+TGG + chr2_2:22240237-22240256 Msa0244100:CDS 50.0%
CGAAAGAGACCCTTTGAGTC+AGG + chr2_2:22240626-22240645 Msa0244100:intron 50.0%
GTCAGATCAGTCATGCTGAC+AGG + chr2_2:22241195-22241214 Msa0244100:CDS 50.0%
GAAGGGCCAATAGCCATGAT+AGG + chr2_2:22241410-22241429 Msa0244100:CDS 50.0%
AGAGCCAACCATCCCAAAGG+AGG - chr2_2:22238273-22238292 None:intergenic 55.0%
CCAAGAGCCAACCATCCCAA+AGG - chr2_2:22238276-22238295 None:intergenic 55.0%
!! CCTTTGGGATGGTTGGCTCT+TGG + chr2_2:22238273-22238292 Msa0244100:CDS 55.0%
GGCTATTGTTGCTGAGACCG+GGG + chr2_2:22239004-22239023 Msa0244100:CDS 55.0%
ACCATCCTTGCAGTCAAGGC+TGG + chr2_2:22239059-22239078 Msa0244100:CDS 55.0%
ACCAGCCTTGACTGCAAGGA+TGG - chr2_2:22239063-22239082 None:intergenic 55.0%
CATCACCAGCCTTGACTGCA+AGG - chr2_2:22239067-22239086 None:intergenic 55.0%
! CCCCAGAGGAGATTAGCCAT+TGG - chr2_2:22239859-22239878 None:intergenic 55.0%
CCCAATAATGGTGGCCAAGG+AGG - chr2_2:22239884-22239903 None:intergenic 55.0%
ACCCCCAATAATGGTGGCCA+AGG - chr2_2:22239887-22239906 None:intergenic 55.0%
GGGGATACCCCCAATAATGG+TGG - chr2_2:22239893-22239912 None:intergenic 55.0%
! TCTCCTCTGGGGAACCTCCT+TGG + chr2_2:22239867-22239886 Msa0244100:intron 60.0%
TCCAGTGGCAGGTGCACTAG+TGG + chr2_2:22240737-22240756 Msa0244100:CDS 60.0%
TCCACTAGTGCACCTGCCAC+TGG - chr2_2:22240741-22240760 None:intergenic 60.0%
TGGCCAAGGAGGTTCCCCAG+AGG - chr2_2:22239873-22239892 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 22237674 22242096 22237674 ID=Msa0244100;Name=Msa0244100
chr2_2 mRNA 22237674 22242096 22237674 ID=Msa0244100-mRNA-1;Parent=Msa0244100;Name=Msa0244100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.25|0.11|1|1|1|9|0|808
chr2_2 exon 22237674 22237854 22237674 ID=Msa0244100-mRNA-1:exon:8586;Parent=Msa0244100-mRNA-1
chr2_2 exon 22238133 22238390 22238133 ID=Msa0244100-mRNA-1:exon:8587;Parent=Msa0244100-mRNA-1
chr2_2 exon 22238514 22238611 22238514 ID=Msa0244100-mRNA-1:exon:8588;Parent=Msa0244100-mRNA-1
chr2_2 exon 22238960 22239215 22238960 ID=Msa0244100-mRNA-1:exon:8589;Parent=Msa0244100-mRNA-1
chr2_2 exon 22239505 22239642 22239505 ID=Msa0244100-mRNA-1:exon:8590;Parent=Msa0244100-mRNA-1
chr2_2 exon 22240189 22240513 22240189 ID=Msa0244100-mRNA-1:exon:8591;Parent=Msa0244100-mRNA-1
chr2_2 exon 22240707 22240909 22240707 ID=Msa0244100-mRNA-1:exon:8592;Parent=Msa0244100-mRNA-1
chr2_2 exon 22241052 22241254 22241052 ID=Msa0244100-mRNA-1:exon:8593;Parent=Msa0244100-mRNA-1
chr2_2 exon 22241332 22242096 22241332 ID=Msa0244100-mRNA-1:exon:8594;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22237674 22237854 22237674 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22238133 22238390 22238133 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22238514 22238611 22238514 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22238960 22239215 22238960 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22239505 22239642 22239505 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22240189 22240513 22240189 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22240707 22240909 22240707 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22241052 22241254 22241052 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
chr2_2 CDS 22241332 22242096 22241332 ID=Msa0244100-mRNA-1:cds;Parent=Msa0244100-mRNA-1
Gene Sequence

>Msa0244100

ATGGTTGAAAATATAAAGAGAAGCAACTTTGAAGTGTTGGGAATGTGTTGTGCAACAGAAGCATCACTGGTTGAAAGAATTCTGAAGCCTCTTCATGGAGTCAAAGCTGTCTCTGTGATTGTTCCTGCTCGAACAGTTACTGTTGTCCATGATGTTCTCCTTATTTCTGAGTCACAAATAGCGGATGCACTGAATACAGCAAGGCTTGAAGCTAGTTTTAGACCACAAGGAGAGACCAATAATGAAAAGAAATGTCCAGATATACTTACAATGGCATGCGGCTTGTTACTTGCACTTTCATTTTTGAAGTATATATATCCTCCTTTGGGATGGTTGGCTCTTGGTTCTGTTGCCATTGGATTCCCTAAAGTTCTATTTAGGGCTTTAGCTTCCATTAGAGCTCTTACTCTTAATATCAACATTTTGGTTTTATTGGCAGTATGTGGTACTGCTGCTTTACAAGATTTTACAGATGGTGGAGTCATCATCTTTCTGTTCTCTATTGCTCAGTGGCTTGAGACAAGAGCAACTCATAAGGCAATGGTTGCAATGTCGTCTTTAACAAACATGGCTCCTCAAATGGCTATTGTTGCTGAGACCGGGGAACGTGTTGATGTCAATGATGTTAAGATGAACACCATCCTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGAATTGTTGTGGAAGGAAAGTGTGAAGTTGATGAAAAAATGTTAACAGGAGAATCATTCCCGGTCACCAAAGAATCAGATTCACTTGTCTGGGCTGGAACTATTAATATGAATGGATATATAAGTGTAAGAACAACTGTGTTGGCGAAAGACACAATGGTTGCCCGAATGTCAAGACTTGTTGAAGAAGCTTCTAGCAGAAAATCACAAGCACAAAGATTCATAGATAATTTTGCAAAGTACTATATTCCTGTGGTTGTGTTGATTTCAGCTAGCATTGCAGTGGTTCCAGCTGCATTAAGTGTTCCTGATATGGAGCCATGGTTTCATCTAGCACTTGTGGTTTTATTGAGTGGATGCCCTTGTGCTCTTATCCTCTCTACACCAGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAATAAGTGGATTACTATTGAAAGGTGGAGATTACCTTGAAACACTGTCTAGAATTAAGACAGTGGCTTTTGATAAAACAGGCACCATAACAAGAGGAGAGTTCTCAGTAACAGATTTTAGTGCTGGAGATGACATCAACAATGAAACCTTACTGTACTGGATTTCGAGTATTGAGAGTAAATCAAGTCATCCAGTGGCAGGTGCACTAGTGGATTATGCAAGGTTGCACTCTATCAAACCAGTACCAGAAAATGTGGAGAATTTTCAAAATTTTCCAGGGGAAGGAATTTTTGGTACAATTGATGGTAATGATATCTATATAGGAAACAAGAGAGTTGGTGTCAGAGCTATATGTAAAAGAGATGATTGCAAAGTGAAAGTTCATAGCCATGAGATTTCTACCAAGAAACAAAATTGTGGAGAAACTCTAGTTGGAGTTTTCAGCCTTGTTGATGCTTGTAGATCAGGTGCTTTAGAGGCAATGGAAGAGCTGAAGTCATTAGGAGTCAGATCAGTCATGCTGACAGGAGATAGCTCTCAAGTTGCCATGTATGTTCAGAGTCAGTTAAACAATGCTATAGACATAGTTCATGCCGAGCTTCTACCACATGAAAAGGCAAAACTCATTGAGAATTTCAAGAAAGAAGGGCCAATAGCCATGATAGGAGATGGCATTAACGATGCTCCTGCATTAGCTACAGCAGACATCGGCATATCAATGGGAATATCTGGTTCAGCTCTTGCAAATGAGACAAGTCACGCGATTCTCATGTCAAACGATATCCGAAAAGTACCTGAAGCGATTCGTTTAGCAAGAAAAACAACTAGAAAACTCATTGAGAATGTCATTATTTCAGTTGGATTCAAATGTGCCATACTTGCATTGGCAATTGCAGGTTATCCATTAGTTTGGCTAGCTGTTTTAACCGATGTTGGAACATGCTTACTTGTGATTTTCAATAGCATGTTAATTTTACAAGAGAATCATAAATATGAAGAAAGAGAATCAACCAAAGGTTGGAAATATGGTAAATTTTTGGAAGATAAGACCAAACCATTACTTAACAAGCAAGGTAATATTGATGAGGAAAAAGGGCTTCTTAGTAGTGAAGAGTGTGGTAAAGATTGTTGTAAAAATGTTACTCATCATGTGGAAACTTCAAACACAAGAAAAGATGAATCTTGTGGAATTTCAAAGTTGAGTTTACTCAATGGAAATGACCATGGAAAGTTTATGTTTGTTGAAGTTCATGTTGTGAAGCCTTGTGTTATGATACAAGATTCTAGCATTGCTACTTTGGAATCTATTACTGTTTCAGAGACAAACTGA
Protein sequence

>Msa0244100

MVENIKRSNFEVLGMCCATEASLVERILKPLHGVKAVSVIVPARTVTVVHDVLLISESQIADALNTARLEASFRPQGETNNEKKCPDILTMACGLLLALSFLKYIYPPLGWLALGSVAIGFPKVLFRALASIRALTLNINILVLLAVCGTAALQDFTDGGVIIFLFSIAQWLETRATHKAMVAMSSLTNMAPQMAIVAETGERVDVNDVKMNTILAVKAGDAIPLDGIVVEGKCEVDEKMLTGESFPVTKESDSLVWAGTINMNGYISVRTTVLAKDTMVARMSRLVEEASSRKSQAQRFIDNFAKYYIPVVVLISASIAVVPAALSVPDMEPWFHLALVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFSVTDFSAGDDINNETLLYWISSIESKSSHPVAGALVDYARLHSIKPVPENVENFQNFPGEGIFGTIDGNDIYIGNKRVGVRAICKRDDCKVKVHSHEISTKKQNCGETLVGVFSLVDACRSGALEAMEELKSLGVRSVMLTGDSSQVAMYVQSQLNNAIDIVHAELLPHEKAKLIENFKKEGPIAMIGDGINDAPALATADIGISMGISGSALANETSHAILMSNDIRKVPEAIRLARKTTRKLIENVIISVGFKCAILALAIAGYPLVWLAVLTDVGTCLLVIFNSMLILQENHKYEERESTKGWKYGKFLEDKTKPLLNKQGNIDEEKGLLSSEECGKDCCKNVTHHVETSNTRKDESCGISKLSLLNGNDHGKFMFVEVHVVKPCVMIQDSSIATLESITVSETN*