AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0245680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245680 MtrunA17_Chr2g0299691 95.575 226 10 0 1 226 102 327 1.50e-158 443
Msa0245680 MtrunA17_Chr4g0070951 71.681 226 63 1 1 226 74 298 7.29e-112 324
Msa0245680 MtrunA17_Chr1g0175561 56.769 229 93 2 1 226 70 295 4.22e-83 251
Msa0245680 MtrunA17_Chr7g0258811 55.895 229 95 2 1 226 115 340 6.44e-83 251
Msa0245680 MtrunA17_Chr8g0372601 50.877 228 106 2 1 226 76 299 1.67e-70 219
Msa0245680 MtrunA17_Chr2g0291751 50.439 228 108 2 1 226 75 299 1.92e-70 219
Msa0245680 MtrunA17_Chr2g0292211 48.684 228 112 2 1 226 86 310 2.16e-69 217
Msa0245680 MtrunA17_Chr2g0292181 49.561 228 110 2 1 226 84 308 5.32e-69 216
Msa0245680 MtrunA17_Chr5g0404721 49.561 228 109 2 1 226 76 299 1.87e-68 213
Msa0245680 MtrunA17_Chr5g0402581 48.908 229 108 4 1 226 73 295 8.67e-68 211
Msa0245680 MtrunA17_Chr2g0292251 47.807 228 114 2 1 226 74 298 1.57e-67 212
Msa0245680 MtrunA17_Chr2g0292091 48.246 228 113 2 1 226 70 294 2.18e-67 211
Msa0245680 MtrunA17_Chr5g0402571 48.908 229 108 4 1 226 73 295 2.40e-67 210
Msa0245680 MtrunA17_Chr2g0292271 48.684 228 112 2 1 226 75 299 2.41e-67 211
Msa0245680 MtrunA17_Chr5g0438021 51.121 223 93 5 1 219 77 287 1.78e-66 208
Msa0245680 MtrunA17_Chr2g0292101 48.684 228 112 2 1 226 71 295 1.87e-66 209
Msa0245680 MtrunA17_Chr2g0292241 46.930 228 116 2 1 226 75 299 2.69e-66 208
Msa0245680 MtrunA17_Chr3g0106921 50.649 231 95 6 1 225 71 288 7.68e-66 206
Msa0245680 MtrunA17_Chr4g0068621 47.807 228 111 3 1 226 84 305 2.29e-65 206
Msa0245680 MtrunA17_Chr3g0114451 48.899 227 103 3 1 225 72 287 3.31e-64 202
Msa0245680 MtrunA17_Chr2g0292151 48.246 228 113 2 1 226 75 299 5.91e-64 202
Msa0245680 MtrunA17_Chr2g0320071 47.577 227 105 3 1 225 71 285 6.44e-64 201
Msa0245680 MtrunA17_Chr2g0320101 48.458 227 103 4 1 225 71 285 9.00e-64 201
Msa0245680 MtrunA17_Chr2g0292261 47.807 228 114 2 1 226 75 299 1.11e-63 202
Msa0245680 MtrunA17_Chr4g0013821 46.491 228 114 3 1 226 74 295 2.78e-63 200
Msa0245680 MtrunA17_Chr5g0432441 49.351 231 99 5 1 225 76 294 8.86e-63 199
Msa0245680 MtrunA17_Chr3g0129051 48.261 230 103 5 1 226 74 291 1.28e-62 198
Msa0245680 MtrunA17_Chr4g0013721 47.368 228 112 3 1 226 146 367 2.06e-62 200
Msa0245680 MtrunA17_Chr2g0320051 47.534 223 104 3 1 221 71 282 5.18e-62 196
Msa0245680 MtrunA17_Chr2g0292111 46.930 228 116 2 1 226 75 299 6.56e-62 197
Msa0245680 MtrunA17_Chr4g0038171 46.522 230 108 4 1 225 70 289 1.27e-61 196
Msa0245680 MtrunA17_Chr2g0279061 49.083 218 103 4 1 218 14 223 3.98e-61 192
Msa0245680 MtrunA17_Chr5g0400331 48.069 233 110 5 1 226 72 300 5.06e-61 194
Msa0245680 MtrunA17_Chr2g0279041 49.083 218 103 4 1 218 73 282 2.25e-60 192
Msa0245680 MtrunA17_Chr2g0320061 46.256 227 109 3 1 225 71 286 3.70e-60 192
Msa0245680 MtrunA17_Chr5g0421411 45.415 229 120 3 1 226 27 253 1.03e-59 189
Msa0245680 MtrunA17_Chr4g0043391 45.652 230 110 4 1 225 73 292 1.04e-59 191
Msa0245680 MtrunA17_Chr3g0129061 51.092 229 96 5 1 225 74 290 1.31e-59 190
Msa0245680 MtrunA17_Chr2g0322861 46.522 230 115 4 1 228 133 356 3.43e-59 191
Msa0245680 MtrunA17_Chr4g0038151 46.087 230 108 4 1 225 71 289 9.72e-59 188
Msa0245680 MtrunA17_Chr7g0244451 48.458 227 103 4 1 225 70 284 1.28e-58 187
Msa0245680 MtrunA17_Chr2g0292291 45.415 229 119 3 1 226 76 301 1.28e-58 189
Msa0245680 MtrunA17_Chr7g0244461 46.460 226 108 3 1 224 66 280 1.32e-58 187
Msa0245680 MtrunA17_Chr4g0063671 46.637 223 111 4 1 223 67 281 1.34e-58 187
Msa0245680 MtrunA17_Chr3g0129041 54.146 205 83 4 1 201 74 271 3.07e-58 187
Msa0245680 MtrunA17_Chr4g0038161 45.652 230 109 4 1 225 70 288 3.97e-58 186
Msa0245680 MtrunA17_Chr4g0013171 45.652 230 109 5 1 226 73 290 4.65e-58 186
Msa0245680 MtrunA17_Chr4g0024121 43.860 228 120 4 1 225 73 295 1.01e-57 186
Msa0245680 MtrunA17_Chr4g0013181 46.522 230 107 5 1 226 105 322 1.92e-57 186
Msa0245680 MtrunA17_Chr2g0320091 44.737 228 111 4 1 225 71 286 7.47e-57 183
Msa0245680 MtrunA17_Chr5g0432351 47.414 232 106 7 1 227 71 291 1.10e-56 183
Msa0245680 MtrunA17_Chr5g0405991 44.541 229 116 6 1 226 69 289 1.15e-56 182
Msa0245680 MtrunA17_Chr2g0320031 44.053 227 114 3 1 225 72 287 1.51e-56 182
Msa0245680 MtrunA17_Chr4g0013201 43.668 229 115 3 1 227 92 308 9.23e-56 181
Msa0245680 MtrunA17_Chr5g0432341 46.552 232 108 7 1 227 71 291 5.53e-55 178
Msa0245680 MtrunA17_Chr5g0432331 45.259 232 111 7 1 227 102 322 3.64e-54 177
Msa0245680 MtrunA17_Chr1g0204011 43.421 228 120 4 1 226 73 293 4.49e-54 176
Msa0245680 MtrunA17_Chr1g0155611 44.206 233 125 2 1 231 92 321 6.62e-54 176
Msa0245680 MtrunA17_Chr1g0157051 44.737 228 115 6 1 225 70 289 1.52e-52 172
Msa0245680 MtrunA17_Chr4g0013191 42.291 227 119 4 1 225 92 308 2.49e-52 172
Msa0245680 MtrunA17_Chr7g0225221 42.291 227 121 4 1 225 71 289 3.66e-51 169
Msa0245680 MtrunA17_Chr8g0371381 42.795 229 120 6 1 226 72 292 1.35e-50 167
Msa0245680 MtrunA17_Chr3g0107881 43.478 230 115 6 1 225 73 292 1.84e-50 167
Msa0245680 MtrunA17_Chr3g0106901 46.696 227 108 3 1 225 77 292 2.97e-50 166
Msa0245680 MtrunA17_Chr2g0278671 43.119 218 116 5 1 218 70 279 3.61e-50 166
Msa0245680 MtrunA17_Chr7g0224371 42.920 226 115 4 1 224 77 290 5.84e-50 166
Msa0245680 MtrunA17_Chr4g0072091 39.648 227 130 2 1 225 70 291 1.54e-49 164
Msa0245680 MtrunA17_Chr1g0197411 40.693 231 127 4 1 226 74 299 1.65e-49 165
Msa0245680 MtrunA17_Chr4g0046131 40.664 241 130 5 1 234 88 322 1.78e-49 165
Msa0245680 MtrunA17_Chr1g0213061 42.358 229 115 6 1 224 73 289 1.07e-48 162
Msa0245680 MtrunA17_Chr8g0364291 43.478 230 121 5 1 226 69 293 2.83e-48 161
Msa0245680 MtrunA17_Chr5g0401431 36.134 238 126 4 1 225 73 297 3.77e-48 161
Msa0245680 MtrunA17_Chr3g0128061 41.553 219 121 3 1 216 72 286 9.34e-48 160
Msa0245680 MtrunA17_Chr7g0268501 41.410 227 123 4 1 225 71 289 1.19e-47 159
Msa0245680 MtrunA17_Chr7g0268521 41.410 227 123 4 1 225 71 289 1.19e-47 159
Msa0245680 MtrunA17_Chr4g0076211 44.118 204 104 5 1 202 87 282 2.20e-47 159
Msa0245680 MtrunA17_Chr1g0148021 37.975 237 134 4 1 229 73 304 3.38e-47 159
Msa0245680 MtrunA17_Chr6g0477071 42.544 228 113 8 1 226 100 311 5.21e-47 158
Msa0245680 MtrunA17_Chr2g0316791 37.255 255 121 5 1 222 122 370 2.53e-46 158
Msa0245680 MtrunA17_Chr2g0316191 37.109 256 121 5 1 222 122 371 5.36e-46 157
Msa0245680 MtrunA17_Chr2g0311251 36.078 255 124 5 1 222 56 304 6.83e-46 155
Msa0245680 MtrunA17_Chr2g0316481 36.078 255 124 5 1 222 122 370 2.03e-45 156
Msa0245680 MtrunA17_Chr1g0194151 45.455 209 108 4 1 203 76 284 2.66e-45 154
Msa0245680 MtrunA17_Chr2g0316831 36.471 255 123 5 1 222 158 406 1.01e-44 155
Msa0245680 MtrunA17_Chr4g0053871 41.827 208 109 5 1 202 73 274 2.84e-44 151
Msa0245680 MtrunA17_Chr6g0467161 41.304 230 116 6 1 226 91 305 3.26e-44 151
Msa0245680 MtrunA17_Chr6g0460711 43.069 202 107 5 1 200 67 262 7.76e-44 149
Msa0245680 MtrunA17_Chr1g0164891 44.019 209 111 4 1 203 135 343 7.84e-44 151
Msa0245680 MtrunA17_Chr2g0296621 40.594 202 114 3 1 202 96 291 2.11e-43 149
Msa0245680 MtrunA17_Chr1g0188431 41.850 227 116 7 1 226 85 296 2.13e-43 149
Msa0245680 MtrunA17_Chr1g0194271 42.593 216 111 4 1 203 76 291 1.38e-41 144
Msa0245680 MtrunA17_Chr2g0329641 38.182 220 122 6 1 209 82 298 4.70e-41 143
Msa0245680 MtrunA17_Chr6g0467121 38.938 226 125 4 1 226 120 332 6.09e-40 141
Msa0245680 MtrunA17_Chr7g0254201 37.313 201 119 4 1 200 66 260 7.93e-40 139
Msa0245680 MtrunA17_Chr2g0311241 31.525 295 123 6 1 222 106 394 1.29e-38 139
Msa0245680 MtrunA17_Chr2g0292281 42.308 182 92 2 45 226 17 185 3.04e-37 130
Msa0245680 MtrunA17_Chr3g0114461 44.785 163 79 2 64 226 10 161 3.25e-37 129
Msa0245680 MtrunA17_Chr4g0004591 37.198 207 105 2 38 224 123 324 2.73e-36 130
Msa0245680 MtrunA17_Chr1g0181511 36.239 218 129 6 2 215 74 285 3.28e-36 130
Msa0245680 MtrunA17_Chr7g0254231 35.498 231 127 7 1 224 68 283 8.06e-36 129
Msa0245680 MtrunA17_Chr3g0136751 36.364 231 132 6 1 226 71 291 1.27e-35 128
Msa0245680 MtrunA17_Chr5g0432401 38.053 226 85 6 1 221 75 250 4.65e-35 126
Msa0245680 MtrunA17_Chr6g0467251 36.797 231 126 7 1 226 82 297 1.99e-34 125
Msa0245680 MtrunA17_Chr6g0451571 35.593 236 129 7 1 226 81 303 2.52e-34 125
Msa0245680 MtrunA17_Chr4g0074851 33.051 236 130 6 2 226 79 297 3.33e-33 122
Msa0245680 MtrunA17_Chr2g0316141 32.812 256 114 7 1 222 11 242 8.14e-33 120
Msa0245680 MtrunA17_Chr2g0316181 32.812 256 114 7 1 222 11 242 8.14e-33 120
Msa0245680 MtrunA17_Chr2g0316811 37.766 188 97 4 1 169 96 282 1.68e-32 120
Msa0245680 MtrunA17_Chr1g0181481 33.929 224 124 6 2 214 74 284 8.15e-32 118
Msa0245680 MtrunA17_Chr5g0413051 35.211 213 123 7 1 202 119 327 8.91e-32 119
Msa0245680 MtrunA17_Chr4g0075241 32.751 229 144 5 1 226 75 296 3.90e-31 117
Msa0245680 MtrunA17_Chr1g0181431 32.589 224 127 6 2 214 74 284 2.07e-30 114
Msa0245680 MtrunA17_Chr5g0432321 38.710 124 68 2 74 197 17 132 2.29e-22 89.0
Msa0245680 MtrunA17_Chr4g0013811 44.595 74 41 0 63 136 5 78 1.84e-18 77.0
Msa0245680 MtrunA17_Chr3g0114491 63.636 66 21 2 1 63 64 129 1.62e-17 76.3
Msa0245680 MtrunA17_Chr7g0254181 40.000 95 54 1 25 119 31 122 3.61e-15 70.5
Msa0245680 MtrunA17_Chr1g0181501 29.091 165 103 4 64 225 4 157 1.50e-13 67.0
Msa0245680 MtrunA17_Chr2g0316771 26.144 153 78 3 103 225 7 154 3.40e-13 65.9
Msa0245680 MtrunA17_Chr6g0468731 56.452 62 25 2 1 62 29 88 1.97e-12 61.2
Msa0245680 MtrunA17_Chr3g0104101 33.913 115 73 2 113 226 5 117 3.25e-12 62.4
Msa0245680 MtrunA17_Chr1g0196191 54.839 62 25 2 1 60 31 91 4.36e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245680 AT5G19890.1 62.832 226 81 3 1 226 76 298 2.05e-94 280
Msa0245680 AT5G06720.1 54.825 228 98 2 1 226 78 302 3.79e-79 241
Msa0245680 AT5G06730.1 53.070 228 102 2 1 226 79 303 3.92e-76 234
Msa0245680 AT4G36430.1 50.439 228 107 2 1 226 76 299 1.69e-73 226
Msa0245680 AT2G38390.1 49.784 231 109 4 1 228 77 303 1.38e-71 222
Msa0245680 AT2G18150.1 49.123 228 110 2 1 226 82 305 4.79e-71 221
Msa0245680 AT5G66390.1 50.000 228 108 2 1 226 79 302 8.20e-71 220
Msa0245680 AT2G38380.1 51.092 229 106 3 1 226 77 302 4.51e-70 218
Msa0245680 AT1G49570.1 50.435 230 104 4 1 225 94 318 2.18e-69 217
Msa0245680 AT2G18140.1 48.246 228 112 2 1 226 81 304 4.23e-68 213
Msa0245680 AT5G05340.1 50.000 230 97 5 1 225 76 292 1.76e-67 211
Msa0245680 AT3G50990.1 48.684 228 111 2 1 226 87 310 2.16e-66 209
Msa0245680 AT4G16270.1 49.561 228 109 2 1 226 96 319 3.12e-66 208
Msa0245680 AT1G44970.1 49.123 228 111 2 1 226 91 315 1.97e-62 199
Msa0245680 AT3G32980.1 47.162 229 116 3 1 226 77 303 4.98e-62 198
Msa0245680 AT4G08770.1 47.162 229 116 3 1 226 70 296 2.23e-61 196
Msa0245680 AT5G19880.1 50.216 231 107 3 1 226 71 298 2.41e-61 195
Msa0245680 AT2G41480.1 48.430 223 107 4 1 223 75 289 7.68e-61 194
Msa0245680 AT3G49120.1 47.598 229 115 3 1 226 78 304 7.12e-60 192
Msa0245680 AT5G58390.1 48.261 230 104 5 1 226 67 285 1.42e-59 190
Msa0245680 AT4G08780.1 44.978 229 121 3 1 226 70 296 5.16e-59 190
Msa0245680 AT3G49110.1 46.725 229 117 3 1 226 79 305 9.80e-59 189
Msa0245680 AT5G64120.1 47.945 219 109 5 1 219 81 294 1.54e-58 188
Msa0245680 AT1G68850.1 43.723 231 122 4 1 226 76 303 4.57e-58 187
Msa0245680 AT2G22420.1 43.421 228 121 3 1 226 69 290 8.78e-58 186
Msa0245680 AT2G35380.1 47.186 231 115 4 1 226 76 304 8.74e-57 184
Msa0245680 AT5G64110.1 49.029 206 99 4 1 205 80 280 1.22e-56 183
Msa0245680 AT4G11290.1 42.609 230 123 4 1 226 71 295 3.34e-56 182
Msa0245680 AT5G39580.1 48.858 219 102 6 1 218 71 280 3.74e-56 182
Msa0245680 AT5G15180.1 44.186 215 117 3 1 214 78 290 3.74e-55 179
Msa0245680 AT5G58400.1 44.298 228 112 6 1 220 76 296 2.96e-54 177
Msa0245680 AT1G14550.1 42.105 228 119 4 1 225 72 289 8.61e-54 176
Msa0245680 AT1G05240.1 44.240 217 113 4 1 216 72 281 2.78e-53 174
Msa0245680 AT1G05250.1 44.240 217 113 4 1 216 72 281 2.78e-53 174
Msa0245680 AT5G51890.1 43.913 230 117 6 1 226 72 293 4.08e-53 174
Msa0245680 AT2G35380.2 46.047 215 111 3 15 226 4 216 1.14e-52 171
Msa0245680 AT5G42180.1 43.612 227 118 6 1 224 69 288 2.04e-52 172
Msa0245680 AT3G01190.1 44.091 220 118 4 1 219 72 287 2.67e-52 172
Msa0245680 AT1G05260.1 41.150 226 126 4 1 220 72 296 1.02e-50 168
Msa0245680 AT3G21770.1 41.667 228 126 4 1 226 75 297 1.18e-50 168
Msa0245680 AT4G25980.1 40.826 218 122 3 1 218 72 282 1.16e-49 165
Msa0245680 AT5G17820.1 40.889 225 120 5 1 225 70 281 1.49e-49 164
Msa0245680 AT5G14130.1 41.850 227 125 4 1 225 78 299 5.52e-49 164
Msa0245680 AT5G14130.2 41.850 227 125 4 1 225 119 340 1.42e-48 164
Msa0245680 AT5G17820.2 40.889 225 120 5 1 225 123 334 2.30e-48 163
Msa0245680 AT1G14540.1 40.088 227 124 3 1 225 67 283 4.33e-48 161
Msa0245680 AT4G37530.1 40.435 230 127 4 1 225 73 297 1.07e-47 160
Msa0245680 AT5G64100.1 41.071 224 125 5 1 224 83 299 1.10e-47 160
Msa0245680 AT4G33870.1 36.641 262 123 5 1 225 114 369 1.66e-47 162
Msa0245680 AT3G03670.1 42.035 226 124 4 1 224 69 289 1.67e-47 159
Msa0245680 AT4G37530.2 40.741 216 105 3 1 202 73 279 2.33e-47 158
Msa0245680 AT1G77100.1 43.111 225 113 7 1 223 70 281 7.27e-46 155
Msa0245680 AT4G37520.1 38.261 230 132 4 1 225 73 297 8.87e-46 155
Msa0245680 AT2G18980.1 39.056 233 134 4 1 229 71 299 1.52e-45 154
Msa0245680 AT4G17690.1 39.149 235 119 6 1 226 72 291 6.78e-45 153
Msa0245680 AT2G43480.1 40.000 225 121 6 1 220 83 298 9.52e-45 153
Msa0245680 AT4G30170.1 40.654 214 119 4 1 210 73 282 1.08e-44 152
Msa0245680 AT2G34060.1 41.063 207 116 2 1 201 88 294 2.20e-44 152
Msa0245680 AT5G22410.1 40.086 232 127 7 1 228 74 297 1.08e-43 150
Msa0245680 AT5G24070.1 37.946 224 125 6 1 219 83 297 1.11e-43 150
Msa0245680 AT1G71695.1 41.558 231 118 8 1 226 90 308 1.47e-43 150
Msa0245680 AT4G37520.2 37.391 230 131 5 1 225 73 294 7.57e-43 147
Msa0245680 AT4G33420.1 41.921 229 115 8 1 227 83 295 4.39e-42 145
Msa0245680 AT5G67400.1 40.580 207 118 3 1 202 73 279 6.41e-42 145
Msa0245680 AT4G33420.2 41.921 229 115 8 1 227 130 342 1.22e-41 145
Msa0245680 AT3G49960.1 39.614 207 120 3 1 202 73 279 7.09e-41 142
Msa0245680 AT2G24800.1 40.086 232 123 7 1 226 77 298 4.41e-40 140
Msa0245680 AT1G24110.1 35.714 238 127 5 1 226 68 291 2.54e-39 138
Msa0245680 AT5G47000.1 36.596 235 126 5 1 226 79 299 4.86e-39 138
Msa0245680 AT5G40150.1 35.169 236 127 6 1 226 78 297 5.22e-39 137
Msa0245680 AT1G30870.1 38.158 228 126 6 1 226 97 311 5.33e-39 138
Msa0245680 AT4G31760.1 36.797 231 131 6 1 226 75 295 9.22e-38 134
Msa0245680 AT2G39040.1 41.148 209 115 4 1 202 92 299 2.69e-36 131
Msa0245680 AT3G28200.1 34.188 234 131 5 1 226 67 285 7.22e-35 126
Msa0245680 AT4G21960.1 30.508 236 136 5 2 226 78 296 3.69e-34 125
Msa0245680 AT4G26010.1 38.424 203 109 6 1 200 68 257 4.16e-33 122
Msa0245680 AT4G26010.2 38.424 203 109 6 1 200 96 285 5.75e-33 122
Msa0245680 AT1G34510.1 31.718 227 136 6 1 225 68 277 1.05e-31 118
Msa0245680 AT5G39580.2 51.538 130 60 3 1 130 71 197 6.63e-30 111
Msa0245680 AT2G37130.2 34.314 204 124 5 2 200 46 244 4.31e-27 105
Msa0245680 AT4G25980.2 45.000 120 64 2 1 120 117 234 7.22e-27 105
Msa0245680 AT2G37130.1 33.824 204 125 4 2 200 77 275 8.46e-27 105
Msa0245680 AT3G17070.2 28.755 233 151 5 1 226 21 245 1.99e-25 100
Msa0245680 AT3G17070.1 28.755 233 151 5 1 226 84 308 4.91e-25 101
Msa0245680 AT2G24800.2 39.752 161 84 6 1 154 77 231 1.18e-21 90.1
Msa0245680 AT3G42570.1 31.818 110 74 1 10 118 38 147 2.72e-12 63.2

Find 36 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCAAGAATTTACTTAA+TGG 0.187588 2_2:-25511383 Msa0245680:CDS
TTTCATTCTCACTATAATAT+TGG 0.220447 2_2:+25511285 None:intergenic
AAAGACGTTGTTACTTTATC+AGG 0.235960 2_2:-25512562 Msa0245680:intron
TCAAATTGATCAATTGAGTA+TGG 0.254466 2_2:+25511413 None:intergenic
TCTTTAGGTGGCCACACTAT+TGG 0.348442 2_2:-25511584 Msa0245680:intron
CCTCTAGCTGAATTTCTGTT+TGG 0.364874 2_2:+25512964 None:intergenic
CATCACTTGAAAAGAGAATC+TGG 0.367746 2_2:+25511339 None:intergenic
CACTTCAACCACTAAACAAT+TGG 0.372539 2_2:-25511309 Msa0245680:CDS
CCTAGCTGAACGTACCAAAA+AGG 0.375211 2_2:+25512697 None:intergenic
AACAGAATCTCTAGCAACTA+TGG 0.388400 2_2:+25512864 None:intergenic
GATGGTTCAGTTCTGCTTGA+TGG 0.400241 2_2:-25513015 Msa0245680:CDS
AACAGATTATTCAACTTCTC+TGG 0.426365 2_2:-25511536 Msa0245680:CDS
ATATTGGACCAATTGTTTAG+TGG 0.439020 2_2:+25511301 None:intergenic
AAGAATTTACTTAATGGAAA+GGG 0.454512 2_2:-25511377 Msa0245680:CDS
AAGACCAACGTTATCAAACT+TGG 0.468625 2_2:+25512591 None:intergenic
CAAGAATTTACTTAATGGAA+AGG 0.474701 2_2:-25511378 Msa0245680:CDS
TCATATTCTAGAGTATTGTC+TGG 0.493442 2_2:+25511503 None:intergenic
GTTGGCTCTCAGGGTTGTGA+TGG 0.495807 2_2:-25513033 None:intergenic
GCTAGGACGCAGAGATGGAT+TGG 0.510343 2_2:-25512680 Msa0245680:CDS
ATAGTACTTAGTGAGTCAAA+TGG 0.513048 2_2:+25512619 None:intergenic
CAAATTGATCAATTGAGTAT+GGG 0.540687 2_2:+25511414 None:intergenic
GAAGTCATAGATAGAATCAA+AGG 0.544495 2_2:-25512937 Msa0245680:CDS
CAAAACTTGTGTCCACAAGA+TGG 0.554038 2_2:-25511464 Msa0245680:CDS
ATTTCCAAGTTTGATAACGT+TGG 0.559993 2_2:-25512595 Msa0245680:CDS
GTGTTACCATCTCCATCTTG+TGG 0.563148 2_2:+25511452 None:intergenic
CTTAGTGAGTCAAATGGAGA+AGG 0.571397 2_2:+25512625 None:intergenic
TATGGCTAATATATCAGCAC+AGG 0.582335 2_2:+25512882 None:intergenic
CCCCATCTTAATCATAGCAT+AGG 0.598668 2_2:+25511240 None:intergenic
AGATAGAATCAAAGGTTCAG+TGG 0.599216 2_2:-25512929 Msa0245680:CDS
GTTCAGCTAGGACGCAGAGA+TGG 0.601311 2_2:-25512685 Msa0245680:CDS
ATTGGTCTCAAATAAAACAC+TGG 0.610195 2_2:-25512662 Msa0245680:CDS
CCAAACAGAAATTCAGCTAG+AGG 0.612793 2_2:-25512964 Msa0245680:CDS
TTGTGTCCACAAGATGGAGA+TGG 0.623591 2_2:-25511458 Msa0245680:CDS
ACCTAGCTCGTCCAATAGTG+TGG 0.633848 2_2:+25511573 None:intergenic
TCAGTGGAGAGTTCATGTAG+TGG 0.653025 2_2:-25512913 Msa0245680:CDS
GCCACACTATTGGACGAGCT+AGG 0.661494 2_2:-25511574 Msa0245680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCTATTGTATAAAAAATT+TGG - chr2_2:25512170-25512189 Msa0245680:intron 10.0%
!!! AATGAAAGATTTTTTTTTTA+TGG - chr2_2:25512999-25513018 Msa0245680:CDS 10.0%
!! AATCTATTGTATAAAAAATT+TGG - chr2_2:25512170-25512189 Msa0245680:intron 10.0%
!!! AATGAAAGATTTTTTTTTTA+TGG - chr2_2:25512999-25513018 Msa0245680:CDS 10.0%
!!! CAAATAATTAATTTGACTAT+AGG + chr2_2:25511738-25511757 None:intergenic 15.0%
!!! TATAGAAATTTAGAGTAATT+TGG - chr2_2:25511815-25511834 Msa0245680:intron 15.0%
!!! ATATTAATGATTTTAAGCTA+AGG - chr2_2:25511870-25511889 Msa0245680:intron 15.0%
!!! TATTAATGATTTTAAGCTAA+GGG - chr2_2:25511871-25511890 Msa0245680:intron 15.0%
!! CACAACAATTAATATATTAA+CGG - chr2_2:25511952-25511971 Msa0245680:intron 15.0%
!!! ACTTATTTTCATAAACTTTT+TGG - chr2_2:25512456-25512475 Msa0245680:intron 15.0%
!!! CAAATAATTAATTTGACTAT+AGG + chr2_2:25511738-25511757 None:intergenic 15.0%
!!! TATAGAAATTTAGAGTAATT+TGG - chr2_2:25511815-25511834 Msa0245680:intron 15.0%
!!! ATATTAATGATTTTAAGCTA+AGG - chr2_2:25511870-25511889 Msa0245680:intron 15.0%
!!! TATTAATGATTTTAAGCTAA+GGG - chr2_2:25511871-25511890 Msa0245680:intron 15.0%
!! CACAACAATTAATATATTAA+CGG - chr2_2:25511952-25511971 Msa0245680:intron 15.0%
!!! ACTTATTTTCATAAACTTTT+TGG - chr2_2:25512456-25512475 Msa0245680:intron 15.0%
!! TGTCAAAAAAATCACATATA+TGG - chr2_2:25511768-25511787 Msa0245680:intron 20.0%
!! TTAATTGTTGTGTTCATATT+TGG + chr2_2:25511944-25511963 None:intergenic 20.0%
!!! AATTTGGTAATACGAAAAAA+TGG - chr2_2:25512186-25512205 Msa0245680:intron 20.0%
!!! CAAACTGTCTTTTTTATATT+TGG - chr2_2:25512254-25512273 Msa0245680:intron 20.0%
!!! TTTGTTTCTATAAGCTATTT+GGG + chr2_2:25512385-25512404 None:intergenic 20.0%
!! TACTTCAAGAATTTACTTAA+TGG - chr2_2:25512885-25512904 Msa0245680:CDS 20.0%
!! AAGAATTTACTTAATGGAAA+GGG - chr2_2:25512891-25512910 Msa0245680:CDS 20.0%
!! TTTCATTCTCACTATAATAT+TGG + chr2_2:25512986-25513005 None:intergenic 20.0%
!! TGTCAAAAAAATCACATATA+TGG - chr2_2:25511768-25511787 Msa0245680:intron 20.0%
!! TTAATTGTTGTGTTCATATT+TGG + chr2_2:25511944-25511963 None:intergenic 20.0%
!!! AATTTGGTAATACGAAAAAA+TGG - chr2_2:25512186-25512205 Msa0245680:intron 20.0%
!!! CAAACTGTCTTTTTTATATT+TGG - chr2_2:25512254-25512273 Msa0245680:intron 20.0%
!!! TTTGTTTCTATAAGCTATTT+GGG + chr2_2:25512385-25512404 None:intergenic 20.0%
!! TACTTCAAGAATTTACTTAA+TGG - chr2_2:25512885-25512904 Msa0245680:CDS 20.0%
!! AAGAATTTACTTAATGGAAA+GGG - chr2_2:25512891-25512910 Msa0245680:CDS 20.0%
!! TTTCATTCTCACTATAATAT+TGG + chr2_2:25512986-25513005 None:intergenic 20.0%
! TAATTGAACTTGAACATACT+AGG + chr2_2:25511432-25511451 None:intergenic 25.0%
! ACGGGTTTAAACTATAATAA+AGG - chr2_2:25511918-25511937 Msa0245680:intron 25.0%
!! ATAGTTTTTGTCTTTGTTAG+TGG - chr2_2:25511987-25512006 Msa0245680:intron 25.0%
!! TAGTTTTTGTCTTTGTTAGT+GGG - chr2_2:25511988-25512007 Msa0245680:intron 25.0%
! TTGTTACGTGACTAAAATAT+CGG - chr2_2:25512130-25512149 Msa0245680:intron 25.0%
!!! CTTTGTTTCTATAAGCTATT+TGG + chr2_2:25512386-25512405 None:intergenic 25.0%
! GGTAAATGAATTCAATTTAG+AGG + chr2_2:25512639-25512658 None:intergenic 25.0%
! TAGCATGCATAAATAGAAAT+TGG + chr2_2:25512660-25512679 None:intergenic 25.0%
!! TATGCATGCTAATTTTCTTT+AGG - chr2_2:25512669-25512688 Msa0245680:CDS 25.0%
! CAAATTGATCAATTGAGTAT+GGG + chr2_2:25512857-25512876 None:intergenic 25.0%
! TCAAATTGATCAATTGAGTA+TGG + chr2_2:25512858-25512877 None:intergenic 25.0%
! CAAGAATTTACTTAATGGAA+AGG - chr2_2:25512890-25512909 Msa0245680:CDS 25.0%
! TAATTGAACTTGAACATACT+AGG + chr2_2:25511432-25511451 None:intergenic 25.0%
! ACGGGTTTAAACTATAATAA+AGG - chr2_2:25511918-25511937 Msa0245680:intron 25.0%
!! ATAGTTTTTGTCTTTGTTAG+TGG - chr2_2:25511987-25512006 Msa0245680:intron 25.0%
!! TAGTTTTTGTCTTTGTTAGT+GGG - chr2_2:25511988-25512007 Msa0245680:intron 25.0%
! TTGTTACGTGACTAAAATAT+CGG - chr2_2:25512130-25512149 Msa0245680:intron 25.0%
!!! CTTTGTTTCTATAAGCTATT+TGG + chr2_2:25512386-25512405 None:intergenic 25.0%
! GGTAAATGAATTCAATTTAG+AGG + chr2_2:25512639-25512658 None:intergenic 25.0%
! TAGCATGCATAAATAGAAAT+TGG + chr2_2:25512660-25512679 None:intergenic 25.0%
!! TATGCATGCTAATTTTCTTT+AGG - chr2_2:25512669-25512688 Msa0245680:CDS 25.0%
! CAAATTGATCAATTGAGTAT+GGG + chr2_2:25512857-25512876 None:intergenic 25.0%
! TCAAATTGATCAATTGAGTA+TGG + chr2_2:25512858-25512877 None:intergenic 25.0%
! CAAGAATTTACTTAATGGAA+AGG - chr2_2:25512890-25512909 Msa0245680:CDS 25.0%
GAAGTCATAGATAGAATCAA+AGG - chr2_2:25511331-25511350 Msa0245680:CDS 30.0%
! TGTGATCATATTTTGTAGAG+TGG - chr2_2:25511544-25511563 Msa0245680:CDS 30.0%
! GTGATCATATTTTGTAGAGT+GGG - chr2_2:25511545-25511564 Msa0245680:CDS 30.0%
! TGATCATATTTTGTAGAGTG+GGG - chr2_2:25511546-25511565 Msa0245680:CDS 30.0%
! ATTGGTCTCAAATAAAACAC+TGG - chr2_2:25511606-25511625 Msa0245680:intron 30.0%
ATAGTACTTAGTGAGTCAAA+TGG + chr2_2:25511652-25511671 None:intergenic 30.0%
!! ATTTCCAAGTTTGATAACGT+TGG - chr2_2:25511673-25511692 Msa0245680:intron 30.0%
!! AAAGACGTTGTTACTTTATC+AGG - chr2_2:25511706-25511725 Msa0245680:intron 30.0%
GAATGAGTCACATTAGTTAA+AGG - chr2_2:25511895-25511914 Msa0245680:intron 30.0%
! AGTTTTTGTCTTTGTTAGTG+GGG - chr2_2:25511989-25512008 Msa0245680:intron 30.0%
AAGAGTTTGATTGGAGTTTA+GGG + chr2_2:25512030-25512049 None:intergenic 30.0%
TAAGAGTTTGATTGGAGTTT+AGG + chr2_2:25512031-25512050 None:intergenic 30.0%
TGGATTTGTAAGAGTTTGAT+TGG + chr2_2:25512039-25512058 None:intergenic 30.0%
TATTCTTGGGAGAGTTTATT+TGG - chr2_2:25512089-25512108 Msa0245680:intron 30.0%
TGTTACGTGACTAAAATATC+GGG - chr2_2:25512131-25512150 Msa0245680:intron 30.0%
!! AAAATATCGGGTTCAAGTTT+TGG - chr2_2:25512143-25512162 Msa0245680:intron 30.0%
ACTAAATCTCCCACATAAAT+AGG + chr2_2:25512230-25512249 None:intergenic 30.0%
GCATAGTTAATTAAGTGCTT+AGG + chr2_2:25512541-25512560 None:intergenic 30.0%
TGCTCATATTACATTAAGAC+AGG - chr2_2:25512594-25512613 Msa0245680:CDS 30.0%
AACAGATTATTCAACTTCTC+TGG - chr2_2:25512732-25512751 Msa0245680:intron 30.0%
!! TCATATTCTAGAGTATTGTC+TGG + chr2_2:25512768-25512787 None:intergenic 30.0%
ATATTGGACCAATTGTTTAG+TGG + chr2_2:25512970-25512989 None:intergenic 30.0%
ATTTGCCTATGCTATGATTA+AGG - chr2_2:25513023-25513042 Msa0245680:CDS 30.0%
GAAGTCATAGATAGAATCAA+AGG - chr2_2:25511331-25511350 Msa0245680:CDS 30.0%
! TGTGATCATATTTTGTAGAG+TGG - chr2_2:25511544-25511563 Msa0245680:CDS 30.0%
! GTGATCATATTTTGTAGAGT+GGG - chr2_2:25511545-25511564 Msa0245680:CDS 30.0%
! TGATCATATTTTGTAGAGTG+GGG - chr2_2:25511546-25511565 Msa0245680:CDS 30.0%
! ATTGGTCTCAAATAAAACAC+TGG - chr2_2:25511606-25511625 Msa0245680:intron 30.0%
ATAGTACTTAGTGAGTCAAA+TGG + chr2_2:25511652-25511671 None:intergenic 30.0%
!! ATTTCCAAGTTTGATAACGT+TGG - chr2_2:25511673-25511692 Msa0245680:intron 30.0%
!! AAAGACGTTGTTACTTTATC+AGG - chr2_2:25511706-25511725 Msa0245680:intron 30.0%
GAATGAGTCACATTAGTTAA+AGG - chr2_2:25511895-25511914 Msa0245680:intron 30.0%
! AGTTTTTGTCTTTGTTAGTG+GGG - chr2_2:25511989-25512008 Msa0245680:intron 30.0%
AAGAGTTTGATTGGAGTTTA+GGG + chr2_2:25512030-25512049 None:intergenic 30.0%
TAAGAGTTTGATTGGAGTTT+AGG + chr2_2:25512031-25512050 None:intergenic 30.0%
TGGATTTGTAAGAGTTTGAT+TGG + chr2_2:25512039-25512058 None:intergenic 30.0%
TATTCTTGGGAGAGTTTATT+TGG - chr2_2:25512089-25512108 Msa0245680:intron 30.0%
TGTTACGTGACTAAAATATC+GGG - chr2_2:25512131-25512150 Msa0245680:intron 30.0%
!! AAAATATCGGGTTCAAGTTT+TGG - chr2_2:25512143-25512162 Msa0245680:intron 30.0%
ACTAAATCTCCCACATAAAT+AGG + chr2_2:25512230-25512249 None:intergenic 30.0%
GCATAGTTAATTAAGTGCTT+AGG + chr2_2:25512541-25512560 None:intergenic 30.0%
TGCTCATATTACATTAAGAC+AGG - chr2_2:25512594-25512613 Msa0245680:CDS 30.0%
AACAGATTATTCAACTTCTC+TGG - chr2_2:25512732-25512751 Msa0245680:intron 30.0%
!! TCATATTCTAGAGTATTGTC+TGG + chr2_2:25512768-25512787 None:intergenic 30.0%
ATATTGGACCAATTGTTTAG+TGG + chr2_2:25512970-25512989 None:intergenic 30.0%
AGATAGAATCAAAGGTTCAG+TGG - chr2_2:25511339-25511358 Msa0245680:CDS 35.0%
TATGGCTAATATATCAGCAC+AGG + chr2_2:25511389-25511408 None:intergenic 35.0%
AACAGAATCTCTAGCAACTA+TGG + chr2_2:25511407-25511426 None:intergenic 35.0%
! GATCATATTTTGTAGAGTGG+GGG - chr2_2:25511547-25511566 Msa0245680:CDS 35.0%
AAGACCAACGTTATCAAACT+TGG + chr2_2:25511680-25511699 None:intergenic 35.0%
GAGTCACATTAGTTAAAGGA+CGG - chr2_2:25511899-25511918 Msa0245680:intron 35.0%
AGTCACATTAGTTAAAGGAC+GGG - chr2_2:25511900-25511919 Msa0245680:intron 35.0%
TCTCACCTGAAAGATATTCT+TGG - chr2_2:25512075-25512094 Msa0245680:intron 35.0%
CTCACCTGAAAGATATTCTT+GGG - chr2_2:25512076-25512095 Msa0245680:intron 35.0%
TTTCCGGATCCTATTTATGT+GGG - chr2_2:25512218-25512237 Msa0245680:intron 35.0%
ACATTGACACAAGAAACGTT+TGG + chr2_2:25512566-25512585 None:intergenic 35.0%
! GCATGCTAATTTTCTTTAGG+TGG - chr2_2:25512672-25512691 Msa0245680:CDS 35.0%
CATCACTTGAAAAGAGAATC+TGG + chr2_2:25512932-25512951 None:intergenic 35.0%
CACTTCAACCACTAAACAAT+TGG - chr2_2:25512959-25512978 Msa0245680:CDS 35.0%
AGATAGAATCAAAGGTTCAG+TGG - chr2_2:25511339-25511358 Msa0245680:CDS 35.0%
TATGGCTAATATATCAGCAC+AGG + chr2_2:25511389-25511408 None:intergenic 35.0%
AACAGAATCTCTAGCAACTA+TGG + chr2_2:25511407-25511426 None:intergenic 35.0%
! GATCATATTTTGTAGAGTGG+GGG - chr2_2:25511547-25511566 Msa0245680:CDS 35.0%
AAGACCAACGTTATCAAACT+TGG + chr2_2:25511680-25511699 None:intergenic 35.0%
GAGTCACATTAGTTAAAGGA+CGG - chr2_2:25511899-25511918 Msa0245680:intron 35.0%
AGTCACATTAGTTAAAGGAC+GGG - chr2_2:25511900-25511919 Msa0245680:intron 35.0%
TCTCACCTGAAAGATATTCT+TGG - chr2_2:25512075-25512094 Msa0245680:intron 35.0%
CTCACCTGAAAGATATTCTT+GGG - chr2_2:25512076-25512095 Msa0245680:intron 35.0%
TTTCCGGATCCTATTTATGT+GGG - chr2_2:25512218-25512237 Msa0245680:intron 35.0%
ACATTGACACAAGAAACGTT+TGG + chr2_2:25512566-25512585 None:intergenic 35.0%
! GCATGCTAATTTTCTTTAGG+TGG - chr2_2:25512672-25512691 Msa0245680:CDS 35.0%
CATCACTTGAAAAGAGAATC+TGG + chr2_2:25512932-25512951 None:intergenic 35.0%
CACTTCAACCACTAAACAAT+TGG - chr2_2:25512959-25512978 Msa0245680:CDS 35.0%
CCTCTAGCTGAATTTCTGTT+TGG + chr2_2:25511307-25511326 None:intergenic 40.0%
CCAAACAGAAATTCAGCTAG+AGG - chr2_2:25511304-25511323 Msa0245680:CDS 40.0%
CTTAGTGAGTCAAATGGAGA+AGG + chr2_2:25511646-25511665 None:intergenic 40.0%
TCTTTGTTAGTGGGGTGAAA+GGG - chr2_2:25511997-25512016 Msa0245680:intron 40.0%
! ATATCTTTCAGGTGAGAGCT+TGG + chr2_2:25512072-25512091 None:intergenic 40.0%
CTCTCCCAAGAATATCTTTC+AGG + chr2_2:25512083-25512102 None:intergenic 40.0%
CATAAATAGGATCCGGAAAG+AGG + chr2_2:25512217-25512236 None:intergenic 40.0%
CTTTCCGGATCCTATTTATG+TGG - chr2_2:25512217-25512236 Msa0245680:intron 40.0%
TCTCCCACATAAATAGGATC+CGG + chr2_2:25512224-25512243 None:intergenic 40.0%
CAAAACTTGTGTCCACAAGA+TGG - chr2_2:25512804-25512823 Msa0245680:intron 40.0%
CCTCTAGCTGAATTTCTGTT+TGG + chr2_2:25511307-25511326 None:intergenic 40.0%
CCAAACAGAAATTCAGCTAG+AGG - chr2_2:25511304-25511323 Msa0245680:CDS 40.0%
CTTAGTGAGTCAAATGGAGA+AGG + chr2_2:25511646-25511665 None:intergenic 40.0%
TCTTTGTTAGTGGGGTGAAA+GGG - chr2_2:25511997-25512016 Msa0245680:intron 40.0%
! ATATCTTTCAGGTGAGAGCT+TGG + chr2_2:25512072-25512091 None:intergenic 40.0%
CTCTCCCAAGAATATCTTTC+AGG + chr2_2:25512083-25512102 None:intergenic 40.0%
CATAAATAGGATCCGGAAAG+AGG + chr2_2:25512217-25512236 None:intergenic 40.0%
CTTTCCGGATCCTATTTATG+TGG - chr2_2:25512217-25512236 Msa0245680:intron 40.0%
TCTCCCACATAAATAGGATC+CGG + chr2_2:25512224-25512243 None:intergenic 40.0%
CAAAACTTGTGTCCACAAGA+TGG - chr2_2:25512804-25512823 Msa0245680:intron 40.0%
GATGGTTCAGTTCTGCTTGA+TGG - chr2_2:25511253-25511272 Msa0245680:CDS 45.0%
TCAGTGGAGAGTTCATGTAG+TGG - chr2_2:25511355-25511374 Msa0245680:CDS 45.0%
CCTAGCTGAACGTACCAAAA+AGG + chr2_2:25511574-25511593 None:intergenic 45.0%
!! CCTTTTTGGTACGTTCAGCT+AGG - chr2_2:25511571-25511590 Msa0245680:CDS 45.0%
GTCTTTGTTAGTGGGGTGAA+AGG - chr2_2:25511996-25512015 Msa0245680:intron 45.0%
AAAATGGCGAGACCTCTTTC+CGG - chr2_2:25512202-25512221 Msa0245680:intron 45.0%
TCTTTAGGTGGCCACACTAT+TGG - chr2_2:25512684-25512703 Msa0245680:CDS 45.0%
TTGTGTCCACAAGATGGAGA+TGG - chr2_2:25512810-25512829 Msa0245680:intron 45.0%
GTGTTACCATCTCCATCTTG+TGG + chr2_2:25512819-25512838 None:intergenic 45.0%
GATGGTTCAGTTCTGCTTGA+TGG - chr2_2:25511253-25511272 Msa0245680:CDS 45.0%
TCAGTGGAGAGTTCATGTAG+TGG - chr2_2:25511355-25511374 Msa0245680:CDS 45.0%
CCTAGCTGAACGTACCAAAA+AGG + chr2_2:25511574-25511593 None:intergenic 45.0%
!! CCTTTTTGGTACGTTCAGCT+AGG - chr2_2:25511571-25511590 Msa0245680:CDS 45.0%
GTCTTTGTTAGTGGGGTGAA+AGG - chr2_2:25511996-25512015 Msa0245680:intron 45.0%
AAAATGGCGAGACCTCTTTC+CGG - chr2_2:25512202-25512221 Msa0245680:intron 45.0%
TCTTTAGGTGGCCACACTAT+TGG - chr2_2:25512684-25512703 Msa0245680:CDS 45.0%
TTGTGTCCACAAGATGGAGA+TGG - chr2_2:25512810-25512829 Msa0245680:intron 45.0%
GTGTTACCATCTCCATCTTG+TGG + chr2_2:25512819-25512838 None:intergenic 45.0%
! TGTAGAGTGGGGGTCCTTTT+TGG - chr2_2:25511557-25511576 Msa0245680:CDS 50.0%
! TCTTTCAGGTGAGAGCTTGG+TGG + chr2_2:25512069-25512088 None:intergenic 50.0%
ACCTAGCTCGTCCAATAGTG+TGG + chr2_2:25512698-25512717 None:intergenic 50.0%
! TGTAGAGTGGGGGTCCTTTT+TGG - chr2_2:25511557-25511576 Msa0245680:CDS 50.0%
! TCTTTCAGGTGAGAGCTTGG+TGG + chr2_2:25512069-25512088 None:intergenic 50.0%
ACCTAGCTCGTCCAATAGTG+TGG + chr2_2:25512698-25512717 None:intergenic 50.0%
GTTCAGCTAGGACGCAGAGA+TGG - chr2_2:25511583-25511602 Msa0245680:intron 55.0%
GCTAGGACGCAGAGATGGAT+TGG - chr2_2:25511588-25511607 Msa0245680:intron 55.0%
!! GAGAGCTTGGTGGTGAGCTA+TGG + chr2_2:25512059-25512078 None:intergenic 55.0%
GCCACACTATTGGACGAGCT+AGG - chr2_2:25512694-25512713 Msa0245680:CDS 55.0%
GTTCAGCTAGGACGCAGAGA+TGG - chr2_2:25511583-25511602 Msa0245680:intron 55.0%
GCTAGGACGCAGAGATGGAT+TGG - chr2_2:25511588-25511607 Msa0245680:intron 55.0%
!! GAGAGCTTGGTGGTGAGCTA+TGG + chr2_2:25512059-25512078 None:intergenic 55.0%
GCCACACTATTGGACGAGCT+AGG - chr2_2:25512694-25512713 Msa0245680:CDS 55.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 25511247 25513043 25511247 ID=Msa0245680;Name=Msa0245680
chr2_2 mRNA 25511247 25513043 25511247 ID=Msa0245680-mRNA-1;Parent=Msa0245680;Name=Msa0245680-mRNA-1;_AED=0.12;_eAED=0.15;_QI=0|0|0|1|1|1|3|0|234
chr2_2 exon 25512858 25513043 25512858 ID=Msa0245680-mRNA-1:exon:9624;Parent=Msa0245680-mRNA-1
chr2_2 exon 25512563 25512728 25512563 ID=Msa0245680-mRNA-1:exon:9623;Parent=Msa0245680-mRNA-1
chr2_2 exon 25511247 25511599 25511247 ID=Msa0245680-mRNA-1:exon:9622;Parent=Msa0245680-mRNA-1
chr2_2 CDS 25512858 25513043 25512858 ID=Msa0245680-mRNA-1:cds;Parent=Msa0245680-mRNA-1
chr2_2 CDS 25512563 25512728 25512563 ID=Msa0245680-mRNA-1:cds;Parent=Msa0245680-mRNA-1
chr2_2 CDS 25511247 25511599 25511247 ID=Msa0245680-mRNA-1:cds;Parent=Msa0245680-mRNA-1
Gene Sequence

>Msa0245680

GGTTGTGATGGTTCAGTTCTGCTTGATGGAGACGAAGATATTGAGAAATTTGCAACTCCAAACAGAAATTCAGCTAGAGGATTTGAAGTCATAGATAGAATCAAAGGTTCAGTGGAGAGTTCATGTAGTGGAGTTGTATCCTGTGCTGATATATTAGCCATAGTTGCTAGAGATTCTGTTCACCTAAGTGGGGGTCCTTTTTGGTACGTTCAGCTAGGACGCAGAGATGGATTGGTCTCAAATAAAACACTGGCAAATAATGCAATTCCTTCTCCATTTGACTCACTAAGTACTATCATTTCCAAGTTTGATAACGTTGGTCTTAGTGTTAAAGACGTTGTTACTTTATCAGGTGGCCACACTATTGGACGAGCTAGGTGCACATTTTTTAGCAACAGATTATTCAACTTCTCTGGAACACAAGAACCAGACAATACTCTAGAATATGAAATGCTAACTGAATTACAAAACTTGTGTCCACAAGATGGAGATGGTAACACAACTACTGTTCTAGACCCATACTCAATTGATCAATTTGATAACAATTACTTCAAGAATTTACTTAATGGAAAGGGTCTACTTAGCTCTGACCAGATTCTCTTTTCAAGTGATGAAGAATTCACTTCAACCACTAAACAATTGGTCCAATATTATAGTGAGAATGAAAGATTTTTTTTTTATGGAATTTGCCTATGCTATGATTAA
Protein sequence

>Msa0245680

GCDGSVLLDGDEDIEKFATPNRNSARGFEVIDRIKGSVESSCSGVVSCADILAIVARDSVHLSGGPFWYVQLGRRDGLVSNKTLANNAIPSPFDSLSTIISKFDNVGLSVKDVVTLSGGHTIGRARCTFFSNRLFNFSGTQEPDNTLEYEMLTELQNLCPQDGDGNTTTVLDPYSIDQFDNNYFKNLLNGKGLLSSDQILFSSDEEFTSTTKQLVQYYSENERFFFYGICLCYD*