AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0245660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245660 MtrunA17_Chr2g0299691 95.482 332 15 0 1 332 28 359 0.0 659
Msa0245660 MtrunA17_Chr4g0070951 68.944 322 97 2 11 332 12 330 1.79e-159 449
Msa0245660 MtrunA17_Chr1g0175561 55.799 319 135 2 16 331 11 326 2.49e-123 357
Msa0245660 MtrunA17_Chr7g0258811 54.012 324 143 2 11 331 51 371 2.34e-122 356
Msa0245660 MtrunA17_Chr5g0404721 52.941 306 138 2 29 332 30 331 1.10e-108 320
Msa0245660 MtrunA17_Chr8g0372601 52.564 312 142 2 23 332 24 331 1.63e-108 319
Msa0245660 MtrunA17_Chr2g0292211 49.102 334 160 4 4 332 14 342 1.69e-107 318
Msa0245660 MtrunA17_Chr2g0320101 50.920 326 145 5 8 331 5 317 3.04e-105 310
Msa0245660 MtrunA17_Chr2g0291751 52.941 306 139 2 28 331 28 330 5.91e-105 311
Msa0245660 MtrunA17_Chr5g0438021 51.227 326 140 6 10 331 15 325 1.16e-104 309
Msa0245660 MtrunA17_Chr3g0129051 50.301 332 147 7 4 331 5 322 4.73e-104 308
Msa0245660 MtrunA17_Chr5g0402581 51.656 302 137 4 33 331 31 326 5.11e-104 308
Msa0245660 MtrunA17_Chr3g0114451 48.936 329 150 4 9 331 2 318 9.19e-104 307
Msa0245660 MtrunA17_Chr2g0320051 51.634 306 135 3 28 331 24 318 2.22e-103 306
Msa0245660 MtrunA17_Chr5g0402571 51.325 302 138 4 33 331 31 326 2.92e-103 306
Msa0245660 MtrunA17_Chr2g0320071 49.536 323 148 4 11 331 8 317 2.98e-103 305
Msa0245660 MtrunA17_Chr2g0292181 50.489 307 147 2 28 332 37 340 4.93e-103 306
Msa0245660 MtrunA17_Chr2g0320061 49.845 323 148 4 11 331 8 318 5.63e-102 302
Msa0245660 MtrunA17_Chr2g0292241 48.860 307 152 2 28 332 28 331 5.78e-102 303
Msa0245660 MtrunA17_Chr5g0432441 50.610 328 141 6 10 331 14 326 1.53e-101 301
Msa0245660 MtrunA17_Chr2g0292251 49.511 307 150 2 28 332 27 330 1.97e-101 302
Msa0245660 MtrunA17_Chr3g0106921 52.258 310 129 6 28 331 24 320 2.25e-101 301
Msa0245660 MtrunA17_Chr2g0292091 49.186 307 151 2 28 332 23 326 2.48e-99 296
Msa0245660 MtrunA17_Chr2g0292271 46.246 333 174 2 1 331 1 330 5.11e-99 296
Msa0245660 MtrunA17_Chr2g0320031 47.059 323 158 3 11 331 8 319 7.92e-99 294
Msa0245660 MtrunA17_Chr2g0292101 49.346 306 150 2 28 331 24 326 1.23e-98 295
Msa0245660 MtrunA17_Chr7g0244461 47.319 317 153 3 17 331 8 312 1.93e-98 293
Msa0245660 MtrunA17_Chr3g0129061 52.188 320 136 6 16 331 16 322 5.99e-98 292
Msa0245660 MtrunA17_Chr4g0038171 47.305 334 152 6 6 331 4 321 1.88e-97 291
Msa0245660 MtrunA17_Chr4g0043391 48.867 309 143 4 28 331 26 324 2.57e-97 291
Msa0245660 MtrunA17_Chr3g0129041 51.818 330 140 6 6 331 8 322 3.89e-97 290
Msa0245660 MtrunA17_Chr4g0013171 47.385 325 155 5 11 331 9 321 7.64e-97 289
Msa0245660 MtrunA17_Chr2g0292151 49.020 306 151 2 28 331 28 330 4.45e-96 288
Msa0245660 MtrunA17_Chr2g0292111 48.366 306 153 2 28 331 28 330 1.90e-95 287
Msa0245660 MtrunA17_Chr2g0292261 49.020 306 151 2 28 331 28 330 2.37e-95 286
Msa0245660 MtrunA17_Chr4g0068621 48.505 301 147 3 33 331 42 336 3.33e-95 286
Msa0245660 MtrunA17_Chr5g0400331 50.323 310 143 5 29 331 26 331 4.53e-95 285
Msa0245660 MtrunA17_Chr4g0038151 48.867 309 142 4 28 331 24 321 4.92e-95 285
Msa0245660 MtrunA17_Chr2g0320091 47.561 328 154 6 8 331 5 318 8.57e-95 284
Msa0245660 MtrunA17_Chr7g0244451 49.346 306 141 4 28 331 23 316 2.75e-94 283
Msa0245660 MtrunA17_Chr4g0013181 49.835 303 136 5 33 331 63 353 3.11e-94 284
Msa0245660 MtrunA17_Chr4g0038161 47.896 309 145 4 28 331 23 320 1.58e-93 281
Msa0245660 MtrunA17_Chr4g0013201 46.006 313 155 3 21 331 38 338 7.61e-93 280
Msa0245660 MtrunA17_Chr5g0432351 46.933 326 157 7 11 331 7 321 7.96e-92 276
Msa0245660 MtrunA17_Chr4g0013721 47.213 305 151 4 29 331 100 396 1.46e-91 279
Msa0245660 MtrunA17_Chr4g0013821 45.425 306 157 4 29 332 28 325 4.44e-91 275
Msa0245660 MtrunA17_Chr1g0155611 48.525 305 152 2 29 331 46 347 5.49e-91 275
Msa0245660 MtrunA17_Chr5g0432341 46.626 326 158 7 11 331 7 321 6.70e-90 271
Msa0245660 MtrunA17_Chr3g0106901 47.988 323 151 4 11 331 16 323 6.92e-90 271
Msa0245660 MtrunA17_Chr2g0292291 45.779 308 161 3 28 332 29 333 7.94e-90 273
Msa0245660 MtrunA17_Chr4g0024121 44.136 324 172 5 11 331 9 326 4.61e-89 270
Msa0245660 MtrunA17_Chr5g0432331 46.605 324 154 8 16 331 40 352 1.26e-88 270
Msa0245660 MtrunA17_Chr4g0063671 46.106 321 160 5 16 331 8 320 3.06e-87 265
Msa0245660 MtrunA17_Chr2g0322861 44.479 326 172 5 10 332 68 387 2.39e-86 265
Msa0245660 MtrunA17_Chr2g0279041 46.535 303 150 5 33 331 31 325 3.58e-86 262
Msa0245660 MtrunA17_Chr4g0013191 45.098 306 155 5 29 331 45 340 4.26e-84 257
Msa0245660 MtrunA17_Chr3g0107881 45.631 309 153 6 28 331 26 324 2.89e-83 254
Msa0245660 MtrunA17_Chr7g0224371 42.638 326 171 6 10 332 11 323 3.83e-83 254
Msa0245660 MtrunA17_Chr1g0213061 45.955 309 149 7 29 332 27 322 1.41e-82 253
Msa0245660 MtrunA17_Chr1g0204011 42.593 324 168 7 11 331 14 322 6.60e-81 249
Msa0245660 MtrunA17_Chr5g0421411 46.975 281 143 4 56 332 8 286 2.20e-80 246
Msa0245660 MtrunA17_Chr5g0405991 44.702 302 152 8 33 331 27 316 5.88e-80 246
Msa0245660 MtrunA17_Chr6g0477071 44.262 305 152 8 29 331 54 342 7.92e-79 244
Msa0245660 MtrunA17_Chr1g0194151 44.590 305 158 5 33 331 34 333 3.72e-77 239
Msa0245660 MtrunA17_Chr7g0268501 43.046 302 159 6 33 331 29 320 1.60e-75 235
Msa0245660 MtrunA17_Chr7g0268521 43.046 302 159 6 33 331 29 320 1.60e-75 235
Msa0245660 MtrunA17_Chr3g0128061 41.914 303 168 3 33 332 30 327 2.02e-75 235
Msa0245660 MtrunA17_Chr8g0371381 43.046 302 157 8 33 331 30 319 3.35e-75 234
Msa0245660 MtrunA17_Chr7g0225221 40.683 322 177 6 12 331 11 320 7.12e-75 233
Msa0245660 MtrunA17_Chr1g0194271 42.949 312 160 5 33 331 34 340 4.80e-74 232
Msa0245660 MtrunA17_Chr1g0197411 38.855 332 187 6 11 331 4 330 1.44e-72 228
Msa0245660 MtrunA17_Chr5g0401431 36.228 334 184 5 13 330 8 328 2.57e-72 227
Msa0245660 MtrunA17_Chr1g0148021 37.846 325 192 4 12 331 9 328 4.87e-72 226
Msa0245660 MtrunA17_Chr7g0254201 39.333 300 170 5 33 331 24 312 4.93e-72 226
Msa0245660 MtrunA17_Chr4g0076211 41.528 301 160 7 34 331 46 333 5.31e-72 226
Msa0245660 MtrunA17_Chr1g0188431 41.104 326 170 8 13 331 17 327 2.03e-71 224
Msa0245660 MtrunA17_Chr6g0467161 42.434 304 156 6 33 332 49 337 2.80e-71 224
Msa0245660 MtrunA17_Chr5g0432401 39.759 332 142 7 7 330 4 285 4.66e-71 222
Msa0245660 MtrunA17_Chr2g0316791 38.323 334 167 6 33 332 80 408 5.72e-71 226
Msa0245660 MtrunA17_Chr1g0157051 41.967 305 163 7 29 330 24 317 6.06e-71 223
Msa0245660 MtrunA17_Chr4g0072091 40.397 302 173 2 28 327 23 319 9.72e-71 223
Msa0245660 MtrunA17_Chr2g0278671 42.444 311 166 7 26 331 21 323 9.93e-71 223
Msa0245660 MtrunA17_Chr2g0279061 46.768 263 128 5 73 331 12 266 1.76e-70 220
Msa0245660 MtrunA17_Chr2g0316481 37.425 334 170 6 33 332 80 408 7.20e-70 223
Msa0245660 MtrunA17_Chr2g0316191 37.910 335 168 6 33 332 80 409 7.64e-70 223
Msa0245660 MtrunA17_Chr2g0329641 37.349 332 187 6 13 331 12 335 8.61e-70 221
Msa0245660 MtrunA17_Chr2g0316831 37.725 334 169 6 33 332 116 444 9.68e-70 224
Msa0245660 MtrunA17_Chr2g0296621 41.528 301 163 7 33 332 54 342 5.78e-69 219
Msa0245660 MtrunA17_Chr1g0164891 41.967 305 166 5 33 331 93 392 6.93e-69 220
Msa0245660 MtrunA17_Chr8g0364291 39.385 325 188 5 12 332 6 325 8.57e-69 218
Msa0245660 MtrunA17_Chr6g0460711 40.864 301 165 6 33 331 25 314 4.66e-68 216
Msa0245660 MtrunA17_Chr6g0467121 39.677 310 174 4 22 331 67 363 9.81e-68 217
Msa0245660 MtrunA17_Chr7g0254231 39.934 303 163 7 33 332 26 312 1.34e-67 214
Msa0245660 MtrunA17_Chr2g0311251 37.425 334 169 7 33 332 15 342 4.45e-67 214
Msa0245660 MtrunA17_Chr4g0053871 36.923 325 188 6 12 330 10 323 3.17e-66 211
Msa0245660 MtrunA17_Chr2g0311241 34.492 374 166 7 33 332 64 432 2.38e-65 212
Msa0245660 MtrunA17_Chr4g0046131 40.264 303 167 6 33 327 46 342 3.97e-65 209
Msa0245660 MtrunA17_Chr6g0467251 38.957 326 175 9 11 327 14 324 3.17e-61 199
Msa0245660 MtrunA17_Chr1g0181511 35.526 304 182 6 33 332 31 324 8.50e-56 184
Msa0245660 MtrunA17_Chr4g0075241 34.528 307 191 5 28 331 28 327 1.29e-55 184
Msa0245660 MtrunA17_Chr3g0136751 36.513 304 178 6 33 331 29 322 2.14e-54 181
Msa0245660 MtrunA17_Chr6g0451571 36.190 315 177 8 28 331 33 334 5.51e-54 180
Msa0245660 MtrunA17_Chr5g0413051 34.839 310 182 8 33 331 77 377 2.10e-53 179
Msa0245660 MtrunA17_Chr4g0074851 34.146 328 187 6 16 332 20 329 5.26e-53 177
Msa0245660 MtrunA17_Chr1g0181481 34.727 311 175 6 33 332 31 324 6.01e-53 177
Msa0245660 MtrunA17_Chr1g0181431 33.441 311 179 7 33 332 31 324 1.28e-50 171
Msa0245660 MtrunA17_Chr3g0114461 46.392 194 93 2 138 331 10 192 3.86e-50 165
Msa0245660 MtrunA17_Chr2g0292281 42.991 214 109 2 119 332 17 217 1.54e-48 162
Msa0245660 MtrunA17_Chr4g0004591 33.333 318 149 4 33 330 81 355 3.53e-48 165
Msa0245660 MtrunA17_Chr2g0316811 40.000 230 118 4 33 243 54 282 6.64e-48 164
Msa0245660 MtrunA17_Chr2g0316141 33.447 293 137 8 75 332 11 280 2.96e-43 150
Msa0245660 MtrunA17_Chr2g0316181 33.447 293 137 8 75 332 11 280 2.96e-43 150
Msa0245660 MtrunA17_Chr3g0114491 61.947 113 40 2 28 137 17 129 1.18e-39 136
Msa0245660 MtrunA17_Chr1g0181501 32.323 198 120 4 138 332 4 190 1.72e-24 98.6
Msa0245660 MtrunA17_Chr2g0316771 28.177 181 95 3 177 327 7 182 3.03e-22 92.4
Msa0245660 MtrunA17_Chr3g0104101 36.486 148 90 3 187 332 5 150 3.98e-22 90.9
Msa0245660 MtrunA17_Chr5g0432321 37.903 124 69 2 148 271 17 132 7.46e-21 87.0
Msa0245660 MtrunA17_Chr6g0468731 57.971 69 27 2 68 136 22 88 1.52e-18 79.3
Msa0245660 MtrunA17_Chr4g0013811 44.595 74 41 0 137 210 5 78 1.72e-18 79.0
Msa0245660 MtrunA17_Chr1g0181491 38.182 110 66 2 26 134 9 117 2.73e-16 75.1
Msa0245660 MtrunA17_Chr7g0254181 42.105 95 52 2 99 193 31 122 1.06e-15 73.6
Msa0245660 MtrunA17_Chr5g0432361 39.362 94 52 2 237 330 20 108 1.40e-14 68.9
Msa0245660 MtrunA17_Chr7g0268491 41.304 92 46 3 241 331 13 97 2.91e-13 65.1
Msa0245660 MtrunA17_Chr1g0196191 51.515 66 29 2 71 134 27 91 9.05e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245660 AT5G19890.1 60.000 320 123 4 13 332 14 328 2.51e-134 385
Msa0245660 AT5G06720.1 52.615 325 147 3 11 331 12 333 7.98e-117 341
Msa0245660 AT5G06730.1 51.385 325 151 3 11 331 13 334 2.59e-115 338
Msa0245660 AT4G36430.1 54.072 307 135 2 28 332 29 331 4.70e-115 336
Msa0245660 AT2G18150.1 53.115 305 137 2 29 331 36 336 1.21e-111 328
Msa0245660 AT2G18140.1 52.131 305 140 2 29 331 35 335 6.46e-108 318
Msa0245660 AT5G66390.1 51.803 305 141 2 29 331 33 333 3.26e-106 314
Msa0245660 AT2G38390.1 50.489 307 146 3 28 331 30 333 1.63e-105 313
Msa0245660 AT5G05340.1 52.564 312 130 5 25 331 26 324 1.94e-105 311
Msa0245660 AT3G50990.1 51.148 305 143 2 29 331 41 341 8.92e-105 311
Msa0245660 AT2G38380.1 51.140 307 144 3 28 331 30 333 1.55e-102 305
Msa0245660 AT1G49570.1 53.000 300 131 4 33 327 52 346 5.01e-102 304
Msa0245660 AT3G32980.1 50.000 308 149 3 28 332 30 335 2.92e-100 300
Msa0245660 AT1G44970.1 52.131 305 141 2 29 331 45 346 1.97e-98 295
Msa0245660 AT5G19880.1 49.691 324 150 4 13 331 14 329 1.39e-97 292
Msa0245660 AT4G08770.1 49.026 308 152 3 28 332 23 328 1.75e-97 292
Msa0245660 AT4G16270.1 51.163 301 139 3 33 331 54 348 8.74e-97 290
Msa0245660 AT3G49110.1 49.026 308 152 3 28 332 32 337 2.21e-94 285
Msa0245660 AT3G49120.1 49.026 308 152 3 28 332 31 336 2.61e-94 284
Msa0245660 AT4G08780.1 47.078 308 158 3 28 332 23 328 2.74e-94 284
Msa0245660 AT5G58390.1 49.845 323 147 5 13 331 5 316 4.57e-93 280
Msa0245660 AT1G14550.1 45.370 324 164 4 11 331 8 321 9.34e-93 279
Msa0245660 AT5G58400.1 46.828 331 158 7 6 331 8 325 7.92e-92 277
Msa0245660 AT2G22420.1 43.653 323 168 5 11 331 9 319 2.61e-90 273
Msa0245660 AT5G64120.1 45.370 324 162 6 14 331 14 328 3.00e-89 270
Msa0245660 AT2G35380.1 49.013 304 148 4 33 331 34 335 4.12e-89 270
Msa0245660 AT2G41480.1 44.817 328 167 6 10 331 9 328 3.24e-88 268
Msa0245660 AT1G68850.1 43.548 310 166 5 29 332 30 336 4.24e-87 265
Msa0245660 AT4G11290.1 43.653 323 173 4 13 331 9 326 1.17e-85 261
Msa0245660 AT5G39580.1 47.333 300 148 6 33 331 29 319 2.70e-84 258
Msa0245660 AT1G14540.1 42.902 317 169 3 17 331 9 315 5.25e-84 256
Msa0245660 AT1G05260.1 42.056 321 179 4 14 332 11 326 2.03e-83 256
Msa0245660 AT5G15180.1 40.979 327 183 6 9 331 9 329 3.95e-83 255
Msa0245660 AT3G01190.1 43.218 317 171 5 16 331 13 321 2.19e-82 253
Msa0245660 AT5G17820.1 41.875 320 170 6 12 331 10 313 1.01e-78 243
Msa0245660 AT5G51890.1 41.049 324 177 7 12 331 9 322 8.28e-78 241
Msa0245660 AT5G17820.2 42.006 319 169 6 13 331 64 366 5.45e-77 240
Msa0245660 AT3G03670.1 42.508 327 177 6 7 331 4 321 1.68e-76 238
Msa0245660 AT1G05240.1 41.391 302 168 5 33 331 30 325 2.48e-76 237
Msa0245660 AT1G05250.1 41.391 302 168 5 33 331 30 325 2.48e-76 237
Msa0245660 AT5G64110.1 41.390 331 175 7 10 331 10 330 3.51e-76 237
Msa0245660 AT3G21770.1 42.053 302 168 4 33 332 33 329 6.17e-76 236
Msa0245660 AT5G14130.1 38.390 323 191 4 11 331 14 330 1.09e-75 236
Msa0245660 AT5G14130.2 38.390 323 191 4 11 331 55 371 4.42e-75 236
Msa0245660 AT1G77100.1 45.902 305 146 8 33 331 28 319 2.75e-74 232
Msa0245660 AT5G42180.1 41.639 305 164 7 29 330 23 316 3.95e-73 229
Msa0245660 AT4G25980.1 40.810 321 173 5 16 331 18 326 1.20e-72 228
Msa0245660 AT4G37530.1 40.461 304 171 4 33 331 31 329 3.05e-72 227
Msa0245660 AT1G71695.1 41.401 314 167 8 24 332 39 340 7.40e-72 227
Msa0245660 AT2G18980.1 39.385 325 185 5 11 331 7 323 4.76e-71 224
Msa0245660 AT4G33420.1 40.964 332 178 9 2 331 10 325 3.88e-70 221
Msa0245660 AT4G30170.1 40.584 308 171 5 28 331 26 325 6.44e-70 221
Msa0245660 AT4G33870.1 36.571 350 178 6 16 327 54 397 1.51e-69 223
Msa0245660 AT4G33420.2 40.964 332 178 9 2 331 57 372 1.64e-69 221
Msa0245660 AT4G37520.1 38.158 304 178 4 33 331 31 329 2.50e-69 219
Msa0245660 AT5G24070.1 38.053 339 184 9 11 332 7 336 7.09e-69 219
Msa0245660 AT5G64100.1 40.803 299 169 6 33 331 41 331 1.01e-68 218
Msa0245660 AT4G17690.1 39.048 315 168 6 27 332 24 323 2.12e-68 217
Msa0245660 AT2G35380.2 47.967 246 123 3 89 331 4 247 6.08e-68 213
Msa0245660 AT2G43480.1 39.937 318 175 7 21 331 27 335 2.47e-67 214
Msa0245660 AT4G37520.2 37.500 304 177 5 33 331 31 326 2.13e-66 212
Msa0245660 AT2G34060.1 38.110 328 187 5 13 329 22 344 4.90e-64 206
Msa0245660 AT5G67400.1 37.237 333 194 5 9 331 2 329 1.04e-63 205
Msa0245660 AT3G49960.1 37.217 309 184 4 28 331 26 329 3.10e-63 204
Msa0245660 AT5G47000.1 36.667 330 182 6 16 332 16 331 7.34e-63 203
Msa0245660 AT4G37530.2 42.570 249 138 3 33 276 31 279 1.14e-62 201
Msa0245660 AT5G22410.1 37.888 322 185 9 12 328 11 322 5.97e-62 201
Msa0245660 AT2G24800.1 40.328 305 166 7 33 331 35 329 8.32e-62 200
Msa0245660 AT2G39040.1 39.936 313 172 7 28 331 45 350 1.32e-61 200
Msa0245660 AT5G40150.1 36.943 314 172 6 28 331 31 328 3.80e-61 198
Msa0245660 AT4G26010.1 37.309 327 180 8 8 331 5 309 1.10e-60 197
Msa0245660 AT4G26010.2 37.309 327 180 8 8 331 33 337 1.70e-60 197
Msa0245660 AT1G30870.1 38.462 312 178 7 24 332 46 346 5.64e-59 193
Msa0245660 AT4G21960.1 33.531 337 195 6 7 332 10 328 1.58e-58 192
Msa0245660 AT4G31760.1 35.714 336 201 7 1 331 1 326 3.34e-58 191
Msa0245660 AT3G28200.1 36.218 312 176 5 28 331 20 316 3.85e-58 190
Msa0245660 AT1G24110.1 36.000 325 198 5 11 331 4 322 1.66e-57 189
Msa0245660 AT1G34510.1 34.251 327 192 7 8 332 5 310 3.88e-57 187
Msa0245660 AT2G37130.2 33.553 304 187 6 33 331 3 296 2.25e-48 164
Msa0245660 AT2G37130.1 33.224 304 188 5 33 331 34 327 6.06e-48 164
Msa0245660 AT5G39580.2 50.877 171 81 3 33 203 29 196 2.17e-46 157
Msa0245660 AT3G17070.1 30.952 336 213 6 7 331 12 339 6.56e-45 157
Msa0245660 AT4G25980.2 46.914 162 84 2 33 194 75 234 4.32e-42 148
Msa0245660 AT2G24800.2 40.394 203 108 6 33 228 35 231 3.18e-34 126
Msa0245660 AT3G17070.2 30.224 268 171 6 71 331 18 276 6.64e-33 123
Msa0245660 AT3G42570.1 29.530 149 96 3 47 194 9 149 1.40e-13 67.8
Msa0245660 AT1G77490.2 25.735 272 145 11 63 314 106 340 1.42e-13 71.6
Msa0245660 AT1G77490.1 25.735 272 145 11 63 314 106 340 1.92e-13 71.2

Find 47 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCAAGAATTTACTTAA+TGG 0.187588 2_2:+25470676 Msa0245660:CDS
TTTCATTCTCACTATAATAT+TGG 0.220447 2_2:-25470774 None:intergenic
AAAGACGTTGTTACTTTATC+AGG 0.235960 2_2:+25469226 Msa0245660:CDS
CATCACTTGAAAAGAGAATT+TGG 0.238726 2_2:-25470720 None:intergenic
GGGAATATAAATCCACTTAT+TGG 0.243677 2_2:+25470838 Msa0245660:CDS
TCAAATTGATCAATTGAGTA+TGG 0.254466 2_2:-25470646 None:intergenic
TCTTTAGGTGCCCACACTAT+TGG 0.348442 2_2:+25470475 Msa0245660:intron
ATTGTCTGGTTCTTGTGTTC+CGG 0.349407 2_2:-25470542 None:intergenic
CCTCTAGCTGAATTTCTGTT+TGG 0.364874 2_2:-25468517 None:intergenic
CACTTCAACCACTAAACAAT+TGG 0.372539 2_2:+25470750 Msa0245660:CDS
CCTAGCTGAACGTACCAAAA+AGG 0.375211 2_2:-25469091 None:intergenic
AACAGAATCTCTAGCAACTA+TGG 0.388400 2_2:-25468617 None:intergenic
GATGGTTCAATTCTGCTTGA+TGG 0.413140 2_2:+25468466 Msa0245660:CDS
TGCCTATGCTATGATTAAGA+TGG 0.431308 2_2:+25470816 Msa0245660:CDS
ATATTGGACCAATTGTTTAG+TGG 0.439020 2_2:-25470758 None:intergenic
TCATATTCTAAAGTATTGTC+TGG 0.440491 2_2:-25470556 None:intergenic
TTTGGCTCTCAGGGTTGTGA+TGG 0.446467 2_2:+25468448 Msa0245660:intron
AAGAATTTACTTAATGGAAA+GGG 0.454512 2_2:+25470682 Msa0245660:CDS
GCCTATGCTATGATTAAGAT+GGG 0.460291 2_2:+25470817 Msa0245660:CDS
TTACATTTACAAAGCAATCA+TGG 0.460562 2_2:-25467536 None:intergenic
AACAGATTATTCAACTTCTC+CGG 0.465572 2_2:+25470523 Msa0245660:CDS
AAGACCAACGTTATCAAACT+TGG 0.468625 2_2:-25469197 None:intergenic
CAAGAATTTACTTAATGGAA+AGG 0.474701 2_2:+25470681 Msa0245660:CDS
TTGGTTCTGAGGGAGAGATT+AGG 0.479464 2_2:+25470857 Msa0245660:CDS
GCTAGGACGCAGAGATGGAT+TGG 0.510343 2_2:+25469108 Msa0245660:CDS
TCTCCCTCAGAACCAATAAG+TGG 0.511178 2_2:-25470850 None:intergenic
ATAGTACTTAGTGAGTCAAA+TGG 0.513048 2_2:-25469169 None:intergenic
AATCCACTTATTGGTTCTGA+GGG 0.517484 2_2:+25470847 Msa0245660:CDS
AAATCCACTTATTGGTTCTG+AGG 0.528451 2_2:+25470846 Msa0245660:CDS
CAAATTGATCAATTGAGTAT+GGG 0.540687 2_2:-25470645 None:intergenic
GGGGTCAATCGAGGTCTCAT+AGG 0.541891 2_2:-25467402 None:intergenic
CAAAACTTGTGTCCACAAGA+TGG 0.549054 2_2:+25470595 Msa0245660:CDS
ATTTCCAAGTTTGATAACGT+TGG 0.559993 2_2:+25469193 Msa0245660:CDS
GTGTTACCATCTCCATCTTG+TGG 0.563148 2_2:-25470607 None:intergenic
ACCTAGCTCGTCCAATAGTG+TGG 0.565589 2_2:-25470486 None:intergenic
CTTAGTGAGTCAAATGGAGA+AGG 0.571397 2_2:-25469163 None:intergenic
CCCCATCTTAATCATAGCAT+AGG 0.598668 2_2:-25470818 None:intergenic
GTTCAGCTAGGACGCAGAGA+TGG 0.601311 2_2:+25469103 Msa0245660:CDS
CCAAACAGAAATTCAGCTAG+AGG 0.612793 2_2:+25468517 Msa0245660:CDS
TTGTGTCCACAAGATGGAGA+TGG 0.623591 2_2:+25470601 Msa0245660:CDS
AGATAGAATCAAAAGTTCAG+TGG 0.624952 2_2:+25468552 Msa0245660:CDS
CCTAGCTCGTCCAATAGTGT+GGG 0.634190 2_2:-25470485 None:intergenic
AATAAATGAAGAGATTCGAA+TGG 0.634769 2_2:+25467488 Msa0245660:CDS
TCAGTGGAGAGTTCATGCAG+TGG 0.647754 2_2:+25468568 Msa0245660:CDS
CCCACACTATTGGACGAGCT+AGG 0.650505 2_2:+25470485 Msa0245660:CDS
CCTATGCTATGATTAAGATG+GGG 0.675465 2_2:+25470818 Msa0245660:CDS
ATTGGTCTCAAACAAAACAC+AGG 0.712701 2_2:+25469126 Msa0245660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATATATATATTTT+TGG + chr2_2:25469588-25469607 Msa0245660:intron 0.0%
!!! TTTTTTTATTTTTTTAGGTT+CGG - chr2_2:25469402-25469421 None:intergenic 10.0%
!!! ACTTATTTTCATAAATATTT+TGG + chr2_2:25470249-25470268 Msa0245660:intron 10.0%
!!! TTTATTTAAATAGTCTTTTG+TGG - chr2_2:25468074-25468093 None:intergenic 15.0%
!!! TGTAAAAAAAAAAGTGTATA+AGG - chr2_2:25468246-25468265 None:intergenic 15.0%
!! ATGCTTATAAGAAAAAAAAA+AGG - chr2_2:25468367-25468386 None:intergenic 15.0%
!!! TTTTTTTTTCTTATAAGCAT+TGG + chr2_2:25468367-25468386 Msa0245660:intron 15.0%
!! AAAATGTTGGATAAATAAAA+AGG - chr2_2:25468430-25468449 None:intergenic 15.0%
!!! TTTTATTTATCCAACATTTT+TGG + chr2_2:25468430-25468449 Msa0245660:intron 15.0%
!!! TATTAAAAAAATCGCAATTT+TGG - chr2_2:25468926-25468945 None:intergenic 15.0%
!!! AAATTGCGATTTTTTTAATA+AGG + chr2_2:25468926-25468945 Msa0245660:intron 15.0%
!!! AATTGCGATTTTTTTAATAA+GGG + chr2_2:25468927-25468946 Msa0245660:intron 15.0%
!! CAAATAATTTATTTGACTAT+AGG - chr2_2:25469258-25469277 None:intergenic 15.0%
!! TTTATGTCCAAATATAAAAA+AGG - chr2_2:25470040-25470059 None:intergenic 15.0%
!!! TAGTTTCTTTTTTTTTGTTA+GGG - chr2_2:25470177-25470196 None:intergenic 15.0%
!!! TTAGTTTCTTTTTTTTTGTT+AGG - chr2_2:25470178-25470197 None:intergenic 15.0%
!!! GAATGAAAGATTTTTTTTTA+TGG + chr2_2:25470789-25470808 Msa0245660:CDS 15.0%
!! TAACTATTGTAAAAAGATCA+GGG - chr2_2:25467449-25467468 None:intergenic 20.0%
!!! TTGTATAGTTTTATTGAAGT+AGG - chr2_2:25467618-25467637 None:intergenic 20.0%
!!! AAATTTTAAGAGACTATGTT+TGG + chr2_2:25467857-25467876 Msa0245660:intron 20.0%
!!! ATCTGAAAGAATTTTTTCTA+TGG + chr2_2:25468113-25468132 Msa0245660:intron 20.0%
!!! GTTTCAAAATATTGCAATTT+TGG + chr2_2:25468727-25468746 Msa0245660:intron 20.0%
!!! TTGCCATTTTTTTTAATAGA+GGG - chr2_2:25468753-25468772 None:intergenic 20.0%
!!! ATTGCGATTTTTTTAATAAG+GGG + chr2_2:25468928-25468947 Msa0245660:intron 20.0%
!!! TAAAAGAGAGATTTGTTTTA+AGG - chr2_2:25469002-25469021 None:intergenic 20.0%
!!! AACCTTTTGTGTAAAAATTT+TGG + chr2_2:25469933-25469952 Msa0245660:intron 20.0%
!!! TACCAAAATTTTTACACAAA+AGG - chr2_2:25469938-25469957 None:intergenic 20.0%
!!! TTTGTGTAAAAATTTTGGTA+AGG + chr2_2:25469938-25469957 Msa0245660:intron 20.0%
!! TTAGTTTCTATAAGCTATTT+GGG - chr2_2:25470147-25470166 None:intergenic 20.0%
!! TACTTCAAGAATTTACTTAA+TGG + chr2_2:25470676-25470695 Msa0245660:CDS 20.0%
!! AAGAATTTACTTAATGGAAA+GGG + chr2_2:25470682-25470701 Msa0245660:CDS 20.0%
!! TTTCATTCTCACTATAATAT+TGG - chr2_2:25470777-25470796 None:intergenic 20.0%
! CTAACTATTGTAAAAAGATC+AGG - chr2_2:25467450-25467469 None:intergenic 25.0%
!! TTTTACAATAGTTAGAAGAG+AGG + chr2_2:25467455-25467474 Msa0245660:CDS 25.0%
! AATAAATGAAGAGATTCGAA+TGG + chr2_2:25467488-25467507 Msa0245660:CDS 25.0%
! TTACATTTACAAAGCAATCA+TGG - chr2_2:25467539-25467558 None:intergenic 25.0%
! ACATAGTCTCTTAAAATTTG+TGG - chr2_2:25467856-25467875 None:intergenic 25.0%
!! TAATAGTGAAAATCGGTTTA+TGG - chr2_2:25467929-25467948 None:intergenic 25.0%
! ATCGATCTAATAGTGAAAAT+CGG - chr2_2:25467936-25467955 None:intergenic 25.0%
! TCATATCTCATTTGATTCAA+TGG - chr2_2:25467967-25467986 None:intergenic 25.0%
!!! TGAAAGAATTTTTTCTATGG+AGG + chr2_2:25468116-25468135 Msa0245660:intron 25.0%
! CTACTATTTCCTAAATTTGA+GGG + chr2_2:25468178-25468197 Msa0245660:intron 25.0%
!!! AATTTTAGTCCCTCAAATTT+AGG - chr2_2:25468190-25468209 None:intergenic 25.0%
!! TTTTAGTCCTTACAAATGAA+GGG - chr2_2:25468218-25468237 None:intergenic 25.0%
!!! ATTTTAGTCCTTACAAATGA+AGG - chr2_2:25468219-25468238 None:intergenic 25.0%
! TAATTGAACTTGAACATACT+AGG - chr2_2:25468645-25468664 None:intergenic 25.0%
! CTCATGCAAATATTAAAACA+AGG + chr2_2:25468679-25468698 Msa0245660:intron 25.0%
!!! CTTGCCATTTTTTTTAATAG+AGG - chr2_2:25468754-25468773 None:intergenic 25.0%
! ATCATATTTCCCTTATGTTA+GGG - chr2_2:25468813-25468832 None:intergenic 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - chr2_2:25468954-25468973 None:intergenic 25.0%
!!! TCGCAACATTTTAAAACTTA+AGG + chr2_2:25468957-25468976 Msa0245660:intron 25.0%
!!! CGCAACATTTTAAAACTTAA+GGG + chr2_2:25468958-25468977 Msa0245660:intron 25.0%
!!! GCAACATTTTAAAACTTAAG+GGG + chr2_2:25468959-25468978 Msa0245660:intron 25.0%
! TGTCAAAAAAGTCACATATT+TGG + chr2_2:25469288-25469307 Msa0245660:intron 25.0%
!! TCTTTAAGAGAATTGTTAAC+CGG - chr2_2:25469540-25469559 None:intergenic 25.0%
!!! GTTATGTTTTGAACATGAAA+TGG + chr2_2:25469615-25469634 Msa0245660:intron 25.0%
!! AATGAGTCAGATTAGTTAAA+AGG + chr2_2:25469661-25469680 Msa0245660:intron 25.0%
!!! TAGATTTTTTCTCTGTAAGT+GGG + chr2_2:25469759-25469778 Msa0245660:intron 25.0%
!!! TATTTTTGGGAGAGTTTATT+TGG + chr2_2:25469854-25469873 Msa0245660:intron 25.0%
!!! TTTACACAAAAGGTTGTTTT+CGG - chr2_2:25469928-25469947 None:intergenic 25.0%
! TGCATACAATACATCAAAAA+TGG + chr2_2:25469962-25469981 Msa0245660:intron 25.0%
! CTTAGTTTCTATAAGCTATT+TGG - chr2_2:25470148-25470167 None:intergenic 25.0%
! CTCATATTACATTAAGACAA+AGG + chr2_2:25470387-25470406 Msa0245660:intron 25.0%
! TGGTAAGAAATTCAATTTAG+AGG - chr2_2:25470431-25470450 None:intergenic 25.0%
! TAGCATGCATAAATAGAAAT+TGG - chr2_2:25470451-25470470 None:intergenic 25.0%
!! TATGCATGCTAATTTTCTTT+AGG + chr2_2:25470460-25470479 Msa0245660:intron 25.0%
!!! TCATATTCTAAAGTATTGTC+TGG - chr2_2:25470559-25470578 None:intergenic 25.0%
! CAAATTGATCAATTGAGTAT+GGG - chr2_2:25470648-25470667 None:intergenic 25.0%
! TCAAATTGATCAATTGAGTA+TGG - chr2_2:25470649-25470668 None:intergenic 25.0%
! CAAGAATTTACTTAATGGAA+AGG + chr2_2:25470681-25470700 Msa0245660:CDS 25.0%
ACGTTGTCCTGTAAAAATAT+GGG - chr2_2:25467425-25467444 None:intergenic 30.0%
TTCAAATCTTATATAGCCGT+AGG + chr2_2:25467675-25467694 Msa0245660:intron 30.0%
TCAAATCTTATATAGCCGTA+GGG + chr2_2:25467676-25467695 Msa0245660:intron 30.0%
ATAACATTAACATCACCCTA+CGG - chr2_2:25467694-25467713 None:intergenic 30.0%
GGTGCAAAATTTGAGAAAAT+TGG - chr2_2:25467835-25467854 None:intergenic 30.0%
GAAGCCAATTTATTGTGTAT+AGG + chr2_2:25467883-25467902 Msa0245660:intron 30.0%
CTCACCTATACACAATAAAT+TGG - chr2_2:25467890-25467909 None:intergenic 30.0%
AGATATGATGTGACTTCTAT+TGG + chr2_2:25467979-25467998 Msa0245660:intron 30.0%
GCTACTATTTCCTAAATTTG+AGG + chr2_2:25468177-25468196 Msa0245660:intron 30.0%
AGATAGAATCAAAAGTTCAG+TGG + chr2_2:25468552-25468571 Msa0245660:CDS 30.0%
TGGCCCTCTATTAAAAAAAA+TGG + chr2_2:25468747-25468766 Msa0245660:intron 30.0%
AGCATATTTCCCTAAACATT+GGG - chr2_2:25468782-25468801 None:intergenic 30.0%
TCATATTTCCCTTATGTTAG+GGG - chr2_2:25468812-25468831 None:intergenic 30.0%
GATCATATTTCCCTTATGTT+AGG - chr2_2:25468814-25468833 None:intergenic 30.0%
!! GCAACTTTTTGAGAAGATAA+GGG - chr2_2:25468843-25468862 None:intergenic 30.0%
!!! TGGCGTTTTTTCAACAATTT+TGG + chr2_2:25468889-25468908 Msa0245660:intron 30.0%
!!! GGCGTTTTTTCAACAATTTT+GGG + chr2_2:25468890-25468909 Msa0245660:intron 30.0%
ATAGTACTTAGTGAGTCAAA+TGG - chr2_2:25469172-25469191 None:intergenic 30.0%
!! ATTTCCAAGTTTGATAACGT+TGG + chr2_2:25469193-25469212 Msa0245660:CDS 30.0%
!! AAAGACGTTGTTACTTTATC+AGG + chr2_2:25469226-25469245 Msa0245660:CDS 30.0%
! AGTCAGATTAGTTAAAAGGA+CGG + chr2_2:25469665-25469684 Msa0245660:intron 30.0%
!!! GTAGATTTTTTCTCTGTAAG+TGG + chr2_2:25469758-25469777 Msa0245660:intron 30.0%
!!! AGATTTTTTCTCTGTAAGTG+GGG + chr2_2:25469760-25469779 Msa0245660:intron 30.0%
ATTTGTAAGAGTTTGATTGG+AGG - chr2_2:25469807-25469826 None:intergenic 30.0%
TGGATTTGTAAGAGTTTGAT+TGG - chr2_2:25469810-25469829 None:intergenic 30.0%
! TCCCACTTGAAAGATATTTT+TGG + chr2_2:25469840-25469859 Msa0245660:intron 30.0%
! CCCAAAAATATCTTTCAAGT+GGG - chr2_2:25469844-25469863 None:intergenic 30.0%
! CCCACTTGAAAGATATTTTT+GGG + chr2_2:25469841-25469860 Msa0245660:intron 30.0%
TCCCAAAAATATCTTTCAAG+TGG - chr2_2:25469845-25469864 None:intergenic 30.0%
TTGTCGTGTGATTAAAAGAT+CGG + chr2_2:25469893-25469912 Msa0245660:intron 30.0%
!! TTACACAAAAGGTTGTTTTC+GGG - chr2_2:25469927-25469946 None:intergenic 30.0%
CAAATATAAAAAAGGCAACC+CGG - chr2_2:25470032-25470051 None:intergenic 30.0%
GCATAGTTAATTAAGTGCTT+AGG - chr2_2:25470332-25470351 None:intergenic 30.0%
ACATTGACAAAAGAAACGTT+TGG - chr2_2:25470357-25470376 None:intergenic 30.0%
AACAGATTATTCAACTTCTC+CGG + chr2_2:25470523-25470542 Msa0245660:CDS 30.0%
CATCACTTGAAAAGAGAATT+TGG - chr2_2:25470723-25470742 None:intergenic 30.0%
ATATTGGACCAATTGTTTAG+TGG - chr2_2:25470761-25470780 None:intergenic 30.0%
GGGAATATAAATCCACTTAT+TGG + chr2_2:25470838-25470857 Msa0245660:CDS 30.0%
!! GAGTTTCTTCATTTTGAGTG+TGG + chr2_2:25467374-25467393 Msa0245660:CDS 35.0%
TAAAAATATGGGGTCAATCG+AGG - chr2_2:25467414-25467433 None:intergenic 35.0%
!! GATTGACCCCATATTTTTAC+AGG + chr2_2:25467415-25467434 Msa0245660:CDS 35.0%
CGTTGTCCTGTAAAAATATG+GGG - chr2_2:25467424-25467443 None:intergenic 35.0%
CACGTTGTCCTGTAAAAATA+TGG - chr2_2:25467426-25467445 None:intergenic 35.0%
GTGAAAAACACGCTTATGTA+TGG + chr2_2:25468001-25468020 Msa0245660:intron 35.0%
TTACCAACCCTTCATTTGTA+AGG + chr2_2:25468208-25468227 Msa0245660:intron 35.0%
AACAGAATCTCTAGCAACTA+TGG - chr2_2:25468620-25468639 None:intergenic 35.0%
GAGCATATTTCCCTAAACAT+TGG - chr2_2:25468783-25468802 None:intergenic 35.0%
! TCTTTTGACCCCTAACATAA+GGG + chr2_2:25468801-25468820 Msa0245660:intron 35.0%
!! CGCAACTTTTTGAGAAGATA+AGG - chr2_2:25468844-25468863 None:intergenic 35.0%
!!! TTCAACAATTTTGGGACGAA+AGG + chr2_2:25468898-25468917 Msa0245660:intron 35.0%
!!! TCAACAATTTTGGGACGAAA+GGG + chr2_2:25468899-25468918 Msa0245660:intron 35.0%
! TGTGATCACATTTTGTAGAG+TGG + chr2_2:25469064-25469083 Msa0245660:intron 35.0%
! GTGATCACATTTTGTAGAGT+GGG + chr2_2:25469065-25469084 Msa0245660:intron 35.0%
! TGATCACATTTTGTAGAGTG+GGG + chr2_2:25469066-25469085 Msa0245660:intron 35.0%
! ATTGGTCTCAAACAAAACAC+AGG + chr2_2:25469126-25469145 Msa0245660:CDS 35.0%
AAGACCAACGTTATCAAACT+TGG - chr2_2:25469200-25469219 None:intergenic 35.0%
! TTTTCTTAACTAGTGCTTCG+AGG - chr2_2:25469353-25469372 None:intergenic 35.0%
TTTCCTTAACTAGTGTTCAG+TGG + chr2_2:25469511-25469530 Msa0245660:intron 35.0%
! ATGGTAATGTATTTGAGCTG+AGG + chr2_2:25469634-25469653 Msa0245660:intron 35.0%
! TGGTAATGTATTTGAGCTGA+GGG + chr2_2:25469635-25469654 Msa0245660:intron 35.0%
! GTCAGATTAGTTAAAAGGAC+GGG + chr2_2:25469666-25469685 Msa0245660:intron 35.0%
TAAGAGTTTGATTGGAGGAT+GGG - chr2_2:25469802-25469821 None:intergenic 35.0%
!!! CGGGTTGCCTTTTTTATATT+TGG + chr2_2:25470030-25470049 Msa0245660:intron 35.0%
CACTTCAACCACTAAACAAT+TGG + chr2_2:25470750-25470769 Msa0245660:CDS 35.0%
TGCCTATGCTATGATTAAGA+TGG + chr2_2:25470816-25470835 Msa0245660:CDS 35.0%
GCCTATGCTATGATTAAGAT+GGG + chr2_2:25470817-25470836 Msa0245660:CDS 35.0%
CCTATGCTATGATTAAGATG+GGG + chr2_2:25470818-25470837 Msa0245660:CDS 35.0%
!! AAATCCACTTATTGGTTCTG+AGG + chr2_2:25470846-25470865 Msa0245660:CDS 35.0%
!! AATCCACTTATTGGTTCTGA+GGG + chr2_2:25470847-25470866 Msa0245660:CDS 35.0%
! GTAGAGCTACTGCATGTTTT+TGG + chr2_2:25467346-25467365 Msa0245660:CDS 40.0%
AGTCCTTACAAATGAAGGGT+TGG - chr2_2:25468214-25468233 None:intergenic 40.0%
!!! ATCCAACATTTTTGGCTCTC+AGG + chr2_2:25468438-25468457 Msa0245660:intron 40.0%
!!! TCCAACATTTTTGGCTCTCA+GGG + chr2_2:25468439-25468458 Msa0245660:intron 40.0%
GATGGTTCAATTCTGCTTGA+TGG + chr2_2:25468466-25468485 Msa0245660:CDS 40.0%
CCTCTAGCTGAATTTCTGTT+TGG - chr2_2:25468520-25468539 None:intergenic 40.0%
CCAAACAGAAATTCAGCTAG+AGG + chr2_2:25468517-25468536 Msa0245660:CDS 40.0%
CAAGAGTGACCCAATGTTTA+GGG + chr2_2:25468770-25468789 Msa0245660:intron 40.0%
! CTCTTTTGACCCCTAACATA+AGG + chr2_2:25468800-25468819 Msa0245660:intron 40.0%
!!! TGCGATTATGACCCCTTTTT+TGG + chr2_2:25468860-25468879 Msa0245660:intron 40.0%
! GATCACATTTTGTAGAGTGG+GGG + chr2_2:25469067-25469086 Msa0245660:intron 40.0%
CTTAGTGAGTCAAATGGAGA+AGG - chr2_2:25469166-25469185 None:intergenic 40.0%
TGTCCACTGAACACTAGTTA+AGG - chr2_2:25469517-25469536 None:intergenic 40.0%
GGTAATGTATTTGAGCTGAG+GGG + chr2_2:25469636-25469655 Msa0245660:intron 40.0%
AAGAGTTTGATTGGAGGATG+GGG - chr2_2:25469801-25469820 None:intergenic 40.0%
GTAAGAGTTTGATTGGAGGA+TGG - chr2_2:25469803-25469822 None:intergenic 40.0%
! ATATCTTTCAAGTGGGAGCT+TGG - chr2_2:25469837-25469856 None:intergenic 40.0%
! ATGCGGGAGCTTTAATATAC+CGG + chr2_2:25470010-25470029 Msa0245660:intron 40.0%
!! ATTGTCTGGTTCTTGTGTTC+CGG - chr2_2:25470545-25470564 None:intergenic 40.0%
CAAAACTTGTGTCCACAAGA+TGG + chr2_2:25470595-25470614 Msa0245660:CDS 40.0%
CCCCATCTTAATCATAGCAT+AGG - chr2_2:25470821-25470840 None:intergenic 40.0%
ACCCTGAGAGCCAAAAATGT+TGG - chr2_2:25468443-25468462 None:intergenic 45.0%
GCAAGAGTGACCCAATGTTT+AGG + chr2_2:25468769-25468788 Msa0245660:intron 45.0%
ACGCCACGTGTTCCAAAAAA+GGG - chr2_2:25468875-25468894 None:intergenic 45.0%
AACGCCACGTGTTCCAAAAA+AGG - chr2_2:25468876-25468895 None:intergenic 45.0%
CCTAGCTGAACGTACCAAAA+AGG - chr2_2:25469094-25469113 None:intergenic 45.0%
!! CCTTTTTGGTACGTTCAGCT+AGG + chr2_2:25469091-25469110 Msa0245660:CDS 45.0%
AACTAGTGTTCAGTGGACAC+CGG + chr2_2:25469518-25469537 Msa0245660:intron 45.0%
TTCTCTGTAAGTGGGGTGAA+AGG + chr2_2:25469767-25469786 Msa0245660:intron 45.0%
TCTCTGTAAGTGGGGTGAAA+GGG + chr2_2:25469768-25469787 Msa0245660:intron 45.0%
TTAAAGCTCCCGCATACGTA+GGG - chr2_2:25470005-25470024 None:intergenic 45.0%
ATTAAAGCTCCCGCATACGT+AGG - chr2_2:25470006-25470025 None:intergenic 45.0%
! TGCGGGAGCTTTAATATACC+GGG + chr2_2:25470011-25470030 Msa0245660:intron 45.0%
TCTTTAGGTGCCCACACTAT+TGG + chr2_2:25470475-25470494 Msa0245660:intron 45.0%
TTGTGTCCACAAGATGGAGA+TGG + chr2_2:25470601-25470620 Msa0245660:CDS 45.0%
GTGTTACCATCTCCATCTTG+TGG - chr2_2:25470610-25470629 None:intergenic 45.0%
TCTCCCTCAGAACCAATAAG+TGG - chr2_2:25470853-25470872 None:intergenic 45.0%
!! TTGGTTCTGAGGGAGAGATT+AGG + chr2_2:25470857-25470876 Msa0245660:CDS 45.0%
!!! GAATTTTTTTTTATTTTTTT+AGG - chr2_2:25469407-25469426 None:intergenic 5.0%
!! TTTGGCTCTCAGGGTTGTGA+TGG + chr2_2:25468448-25468467 Msa0245660:intron 50.0%
TCAGTGGAGAGTTCATGCAG+TGG + chr2_2:25468568-25468587 Msa0245660:CDS 50.0%
!!! GACCCCTTTTTTGGAACACG+TGG + chr2_2:25468869-25468888 Msa0245660:intron 50.0%
CGCCACGTGTTCCAAAAAAG+GGG - chr2_2:25468874-25468893 None:intergenic 50.0%
! TGTAGAGTGGGGGTCCTTTT+TGG + chr2_2:25469077-25469096 Msa0245660:intron 50.0%
TCAAGTGGGAGCTTGGTCTA+TGG - chr2_2:25469830-25469849 None:intergenic 50.0%
CTTCCCAAACCCTACGTATG+CGG + chr2_2:25469993-25470012 Msa0245660:intron 50.0%
TTCCCAAACCCTACGTATGC+GGG + chr2_2:25469994-25470013 Msa0245660:intron 50.0%
CCTAGCTCGTCCAATAGTGT+GGG - chr2_2:25470488-25470507 None:intergenic 50.0%
ACCTAGCTCGTCCAATAGTG+TGG - chr2_2:25470489-25470508 None:intergenic 50.0%
GGGGTCAATCGAGGTCTCAT+AGG - chr2_2:25467405-25467424 None:intergenic 55.0%
GTTCAGCTAGGACGCAGAGA+TGG + chr2_2:25469103-25469122 Msa0245660:CDS 55.0%
GCTAGGACGCAGAGATGGAT+TGG + chr2_2:25469108-25469127 Msa0245660:CDS 55.0%
CTCCCGCATACGTAGGGTTT+GGG - chr2_2:25469999-25470018 None:intergenic 55.0%
CCCACACTATTGGACGAGCT+AGG + chr2_2:25470485-25470504 Msa0245660:CDS 55.0%
GCTCCCGCATACGTAGGGTT+TGG - chr2_2:25470000-25470019 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 25467333 25470906 25467333 ID=Msa0245660;Name=Msa0245660
chr2_2 mRNA 25467333 25470906 25467333 ID=Msa0245660-mRNA-1;Parent=Msa0245660;Name=Msa0245660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|4|0|332
chr2_2 exon 25467333 25467554 25467333 ID=Msa0245660-mRNA-1:exon:9596;Parent=Msa0245660-mRNA-1
chr2_2 exon 25468460 25468645 25468460 ID=Msa0245660-mRNA-1:exon:9597;Parent=Msa0245660-mRNA-1
chr2_2 exon 25469082 25469247 25469082 ID=Msa0245660-mRNA-1:exon:9598;Parent=Msa0245660-mRNA-1
chr2_2 exon 25470482 25470906 25470482 ID=Msa0245660-mRNA-1:exon:9599;Parent=Msa0245660-mRNA-1
chr2_2 CDS 25467333 25467554 25467333 ID=Msa0245660-mRNA-1:cds;Parent=Msa0245660-mRNA-1
chr2_2 CDS 25468460 25468645 25468460 ID=Msa0245660-mRNA-1:cds;Parent=Msa0245660-mRNA-1
chr2_2 CDS 25469082 25469247 25469082 ID=Msa0245660-mRNA-1:cds;Parent=Msa0245660-mRNA-1
chr2_2 CDS 25470482 25470906 25470482 ID=Msa0245660-mRNA-1:cds;Parent=Msa0245660-mRNA-1
Gene Sequence

>Msa0245660

ATGAATAAATCATGTAGAGCTACTGCATGTTTTTGGCTTATGAGTTTCTTCATTTTGAGTGTGGCTGAACCTATGAGACCTCGATTGACCCCATATTTTTACAGGACAACGTGCCCTGATCTTTTTACAATAGTTAGAAGAGAGGTTCTTAATGCAATAAATGAAGAGATTCGAATGGCTGCTTCTTTGCTTCGTCTTCACTTCCATGATTGCTTTGTAAATGGTTGTGATGGTTCAATTCTGCTTGATGGAGACGAAGATATTGAGAAATTTGCAACTCCAAACAGAAATTCAGCTAGAGGATTTGAAGTCATAGATAGAATCAAAAGTTCAGTGGAGAGTTCATGCAGTGGAGTTGTGTCTTGTGCTGATATATTAGCCATAGTTGCTAGAGATTCTGTTCACCTAAGTGGGGGTCCTTTTTGGTACGTTCAGCTAGGACGCAGAGATGGATTGGTCTCAAACAAAACACAGGCAAATAATGCAATTCCTTCTCCATTTGACTCACTAAGTACTATCATTTCCAAGTTTGATAACGTTGGTCTTAGTGTTAAAGACGTTGTTACTTTATCAGGTGCCCACACTATTGGACGAGCTAGGTGCACATTTTTTAGCAACAGATTATTCAACTTCTCCGGAACACAAGAACCAGACAATACTTTAGAATATGAAATGCTAACTCAATTGCAAAACTTGTGTCCACAAGATGGAGATGGTAACACAACTACTGTTCTAGACCCATACTCAATTGATCAATTTGATAACAATTACTTCAAGAATTTACTTAATGGAAAGGGTCTACTTAGCTCTGACCAAATTCTCTTTTCAAGTGATGAAGAATTCACTTCAACCACTAAACAATTGGTCCAATATTATAGTGAGAATGAAAGATTTTTTTTTATGGAATTTGCCTATGCTATGATTAAGATGGGGAATATAAATCCACTTATTGGTTCTGAGGGAGAGATTAGGAAGAGCTGTAGAGTGATTAATTCTTAA

Protein sequence

>Msa0245660

MNKSCRATACFWLMSFFILSVAEPMRPRLTPYFYRTTCPDLFTIVRREVLNAINEEIRMAASLLRLHFHDCFVNGCDGSILLDGDEDIEKFATPNRNSARGFEVIDRIKSSVESSCSGVVSCADILAIVARDSVHLSGGPFWYVQLGRRDGLVSNKTQANNAIPSPFDSLSTIISKFDNVGLSVKDVVTLSGAHTIGRARCTFFSNRLFNFSGTQEPDNTLEYEMLTQLQNLCPQDGDGNTTTVLDPYSIDQFDNNYFKNLLNGKGLLSSDQILFSSDEEFTSTTKQLVQYYSENERFFFMEFAYAMIKMGNINPLIGSEGEIRKSCRVINS*