Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253360 | RHN58597.1 | 61.029 | 136 | 14 | 1 | 208 | 304 | 110 | 245 | 2.68e-39 | 152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253360 | sp|M4IS90|CCL8_HUMLU | 46.154 | 130 | 30 | 2 | 214 | 304 | 119 | 247 | 4.16e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253360 | A0A4Y1R9J5 | 50.658 | 152 | 63 | 4 | 47 | 198 | 125 | 264 | 1.32e-30 | 134 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0210960 | Msa0253360 | 0.871797 | 5.195929e-67 | -8.615850e-47 |
| Msa0213070 | Msa0253360 | 0.914842 | 1.192004e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253360 | MtrunA17_Chr4g0004091 | 61.029 | 136 | 14 | 1 | 208 | 304 | 110 | 245 | 2.46e-43 | 152 |
| Msa0253360 | MtrunA17_Chr4g0004831 | 55.474 | 137 | 22 | 1 | 209 | 306 | 106 | 242 | 1.03e-37 | 137 |
| Msa0253360 | MtrunA17_Chr2g0282041 | 91.379 | 58 | 5 | 0 | 105 | 162 | 144 | 201 | 1.61e-28 | 117 |
| Msa0253360 | MtrunA17_Chr4g0047751 | 84.483 | 58 | 9 | 0 | 105 | 162 | 155 | 212 | 1.14e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253360 | AT4G21660.3 | 77.143 | 70 | 16 | 0 | 105 | 174 | 160 | 229 | 4.90e-29 | 119 |
| Msa0253360 | AT4G21660.1 | 86.207 | 58 | 8 | 0 | 105 | 162 | 160 | 217 | 3.31e-27 | 113 |
| Msa0253360 | AT4G21660.2 | 86.207 | 58 | 8 | 0 | 105 | 162 | 160 | 217 | 4.25e-27 | 113 |
| Msa0253360 | AT3G16170.1 | 46.667 | 135 | 26 | 3 | 209 | 304 | 126 | 253 | 2.70e-22 | 99.0 |
| Msa0253360 | AT2G38170.2 | 53.731 | 67 | 8 | 1 | 335 | 378 | 127 | 193 | 3.23e-11 | 64.7 |
| Msa0253360 | AT2G38170.1 | 53.731 | 67 | 8 | 1 | 335 | 378 | 127 | 193 | 7.96e-11 | 63.9 |
| Msa0253360 | AT2G38170.3 | 53.731 | 67 | 8 | 1 | 335 | 378 | 127 | 193 | 8.75e-11 | 63.5 |
Find 81 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATGTCAATGAGTTATT+TGG | 0.185955 | 2_2:-45170768 | Msa0253360:CDS |
| AGAATTGGACATTCACAAAA+TGG | 0.255854 | 2_2:-45168939 | Msa0253360:CDS |
| TTCTTGCAGGGGAGCGGCTT+TGG | 0.257739 | 2_2:-45169968 | Msa0253360:intron |
| TCCTCTTAGAAGAGTAGAAT+TGG | 0.345365 | 2_2:-45168954 | Msa0253360:intron |
| TCAAATGTACCGTCGAATTC+AGG | 0.346423 | 2_2:-45170932 | Msa0253360:intron |
| CCGTCTGCTGAATTTGTTGC+TGG | 0.348843 | 2_2:-45169417 | Msa0253360:CDS |
| TTTGAGGACACTGCTGCTTC+AGG | 0.350191 | 2_2:-45170726 | Msa0253360:intron |
| CAGCTCTGAAGAACATTATC+AGG | 0.356591 | 2_2:-45172365 | Msa0253360:CDS |
| CTTCCAACAATTGCAGGTTA+TGG | 0.369594 | 2_2:+45170627 | None:intergenic |
| ATGATGTCAATGAGTTATTT+GGG | 0.370649 | 2_2:-45170767 | Msa0253360:CDS |
| TCAAACCTTCTTCTTGTGCT+TGG | 0.370945 | 2_2:-45168381 | Msa0253360:CDS |
| CAAGAAACCTCATTCCAAAA+AGG | 0.380872 | 2_2:+45169790 | None:intergenic |
| CTTGGTGCACAAGATTTGTT+TGG | 0.381595 | 2_2:-45169771 | Msa0253360:CDS |
| CGACGGTACATTTGAATCTT+CGG | 0.385027 | 2_2:+45170940 | None:intergenic |
| TGCAGCAGATCCTAAGTTGC+TGG | 0.399151 | 2_2:-45170203 | Msa0253360:CDS |
| TCATACCTTCCAACAATTGC+AGG | 0.410987 | 2_2:+45170621 | None:intergenic |
| GTCTTCTTCACTGGTCCTAC+AGG | 0.415281 | 2_2:-45168655 | Msa0253360:intron |
| GAATTGGACATTCACAAAAT+GGG | 0.421927 | 2_2:-45168938 | Msa0253360:CDS |
| ATTGAAATCCAGGGAAATCT+TGG | 0.431539 | 2_2:-45169468 | Msa0253360:intron |
| AATGCAACATGTGGGAATAT+TGG | 0.431829 | 2_2:-45168481 | Msa0253360:intron |
| CTTGGAACTTCCCTACTTTG+TGG | 0.435724 | 2_2:-45168363 | Msa0253360:CDS |
| CTGATAATGTTCTTCAGAGC+TGG | 0.435831 | 2_2:+45172366 | None:intergenic |
| ATACTTGCGACTTGGTTTAG+TGG | 0.439293 | 2_2:-45169393 | Msa0253360:CDS |
| GTATTCTCTATTATTACAGT+TGG | 0.447728 | 2_2:-45168514 | Msa0253360:CDS |
| TATATATCAGACATGCCCTT+AGG | 0.448684 | 2_2:-45170998 | Msa0253360:intron |
| TTCTCTATTATTACAGTTGG+AGG | 0.450730 | 2_2:-45168511 | Msa0253360:CDS |
| TCTCTATGTGATGAAGAATT+CGG | 0.459964 | 2_2:-45169325 | Msa0253360:intron |
| AGACAAATTGTCTTCTTCAC+TGG | 0.467398 | 2_2:-45168664 | Msa0253360:CDS |
| TTGTACACTAGCGGGACAAC+AGG | 0.468065 | 2_2:-45168738 | Msa0253360:CDS |
| ATGGCGGAGACGGCGAGGTA+CGG | 0.471966 | 2_2:+45172391 | None:intergenic |
| GCTTTGGCAATCACCAATCC+TGG | 0.472204 | 2_2:-45169952 | Msa0253360:CDS |
| TAGCCATAACCTGCAATTGT+TGG | 0.488861 | 2_2:-45170630 | Msa0253360:CDS |
| AAGTTCCAAGCACAAGAAGA+AGG | 0.489149 | 2_2:+45168376 | None:intergenic |
| AATCTTGGTGGAGCTCGAAT+AGG | 0.490823 | 2_2:-45169453 | Msa0253360:CDS |
| AAGAAGAAGGTTTGAAAGGA+TGG | 0.493952 | 2_2:+45168389 | None:intergenic |
| CTTTGGATTAGGTGAAGATC+CGG | 0.494848 | 2_2:-45168769 | Msa0253360:intron |
| ATATATCAGACATGCCCTTA+GGG | 0.499828 | 2_2:-45170997 | Msa0253360:intron |
| TTCCAAACACCTACCAGTCC+AGG | 0.501998 | 2_2:+45169934 | None:intergenic |
| ATGTGGTTCTTGCAGGGGAG+CGG | 0.504014 | 2_2:-45169974 | Msa0253360:intron |
| ACTCCTACCACAACAACATC+AGG | 0.506236 | 2_2:+45170330 | None:intergenic |
| TGCAATGCCACCACAAAGTA+GGG | 0.510435 | 2_2:+45168353 | None:intergenic |
| TGCCCTTAGGGATGGATGGA+TGG | 0.515123 | 2_2:-45170985 | Msa0253360:CDS |
| TGATGTTGATAATGAATTTG+AGG | 0.521778 | 2_2:-45170742 | Msa0253360:CDS |
| TTGCAATGCCACCACAAAGT+AGG | 0.522397 | 2_2:+45168352 | None:intergenic |
| TGATAATGTTCTTCAGAGCT+GGG | 0.529587 | 2_2:+45172367 | None:intergenic |
| TGTGACCAATGCCTAGGTGC+AGG | 0.530298 | 2_2:+45170151 | None:intergenic |
| AACACCTACCAGTCCAGGAT+TGG | 0.539428 | 2_2:+45169939 | None:intergenic |
| ATCAGACATGCCCTTAGGGA+TGG | 0.541039 | 2_2:-45170993 | Msa0253360:intron |
| GGAACTTCCCTACTTTGTGG+TGG | 0.543624 | 2_2:-45168360 | Msa0253360:CDS |
| AAGCCATCCATCCATCCCTA+AGG | 0.544993 | 2_2:+45170982 | None:intergenic |
| GACATGCCCTTAGGGATGGA+TGG | 0.546461 | 2_2:-45170989 | Msa0253360:CDS |
| CCAATGCCTAGGTGCAGGTA+CGG | 0.548490 | 2_2:+45170156 | None:intergenic |
| ATGTTCTTCAGAGCTGGGTA+TGG | 0.549422 | 2_2:+45172372 | None:intergenic |
| AGAGCTGGGTATGGCGGAGA+CGG | 0.551603 | 2_2:+45172381 | None:intergenic |
| TTGCTGGAATACTTGCGACT+TGG | 0.552418 | 2_2:-45169401 | Msa0253360:CDS |
| GGCAATCACCAATCCTGGAC+TGG | 0.554841 | 2_2:-45169947 | Msa0253360:CDS |
| TCTGCATAGCTGAGTGCAAG+TGG | 0.559278 | 2_2:+45169357 | None:intergenic |
| CCAGCAACAAATTCAGCAGA+CGG | 0.563226 | 2_2:+45169417 | None:intergenic |
| TCTCTATTATTACAGTTGGA+GGG | 0.566642 | 2_2:-45168510 | Msa0253360:CDS |
| GCACAAGAAGAAGGTTTGAA+AGG | 0.568007 | 2_2:+45168385 | None:intergenic |
| GAAATCCAGGGAAATCTTGG+TGG | 0.568219 | 2_2:-45169465 | Msa0253360:intron |
| CTCAAGACCTGATGTTGTTG+TGG | 0.574621 | 2_2:-45170337 | Msa0253360:intron |
| TTCTTCAGAGCTGGGTATGG+CGG | 0.576008 | 2_2:+45172375 | None:intergenic |
| CCGTACCTGCACCTAGGCAT+TGG | 0.578210 | 2_2:-45170156 | Msa0253360:CDS |
| TGTGGTGGCATTGCAAACCT+TGG | 0.582228 | 2_2:-45168345 | Msa0253360:CDS |
| CATAACCTGCAATTGTTGGA+AGG | 0.584273 | 2_2:-45170626 | Msa0253360:intron |
| CTGAAGAACATTATCAGGAT+CGG | 0.593763 | 2_2:-45172360 | Msa0253360:intron |
| GGGCTTCTTAATGCAACATG+TGG | 0.594840 | 2_2:-45168490 | Msa0253360:CDS |
| CTAGTGTACAAAATCAGTGC+CGG | 0.599653 | 2_2:+45168750 | None:intergenic |
| AATTGGACATTCACAAAATG+GGG | 0.610443 | 2_2:-45168937 | Msa0253360:CDS |
| CTTGCGACTTGGTTTAGTGG+AGG | 0.613008 | 2_2:-45169390 | Msa0253360:CDS |
| AGCCATCCATCCATCCCTAA+GGG | 0.619823 | 2_2:+45170983 | None:intergenic |
| GGCTTCTTAATGCAACATGT+GGG | 0.624011 | 2_2:-45168489 | Msa0253360:CDS |
| ATCACCAATCCTGGACTGGT+AGG | 0.649420 | 2_2:-45169943 | Msa0253360:intron |
| TGGGTATGGCGGAGACGGCG+AGG | 0.654911 | 2_2:+45172386 | None:intergenic |
| TGTGTCTTGAATTTATGTTG+TGG | 0.656196 | 2_2:-45169834 | Msa0253360:CDS |
| GCGGAGACGGCGAGGTACGG+CGG | 0.662251 | 2_2:+45172394 | None:intergenic |
| TGGCATTGCAAACCTTGGAG+TGG | 0.662345 | 2_2:-45168340 | Msa0253360:CDS |
| GTAACACCGTACCTGCACCT+AGG | 0.692657 | 2_2:-45170162 | Msa0253360:CDS |
| TGATGTCAATGAGTTATTTG+GGG | 0.714769 | 2_2:-45170766 | Msa0253360:CDS |
| CGGCGGTGAGAAGAAGATCG+CGG | 0.716171 | 2_2:+45172411 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGAAAATTTCATATAAA+AGG | + | chr2_2:45171605-45171624 | None:intergenic | 10.0% |
| !!! | AAAATTGTTTTAGTGATTTT+AGG | - | chr2_2:45168678-45168697 | Msa0253360:CDS | 15.0% |
| !!! | AAATTGTTTTAGTGATTTTA+GGG | - | chr2_2:45168679-45168698 | Msa0253360:CDS | 15.0% |
| !! | TGTAAATAACAAATAAGTAA+TGG | + | chr2_2:45169180-45169199 | None:intergenic | 15.0% |
| !!! | CATCTAAATTTTCAATAAAA+GGG | + | chr2_2:45169207-45169226 | None:intergenic | 15.0% |
| !! | ATATATATACAGCAAATATA+TGG | + | chr2_2:45169771-45169790 | None:intergenic | 15.0% |
| !!! | TAGTAATATCATTTTCAAAT+TGG | - | chr2_2:45170256-45170275 | Msa0253360:intron | 15.0% |
| !!! | ATTATCTTTGTTATATTGAT+TGG | - | chr2_2:45170899-45170918 | Msa0253360:intron | 15.0% |
| !!! | TTATCTTTGTTATATTGATT+GGG | - | chr2_2:45170900-45170919 | Msa0253360:intron | 15.0% |
| !! | TTTCAGAAAATTATGTGTTT+CGG | - | chr2_2:45168629-45168648 | Msa0253360:intron | 20.0% |
| !!! | AAATCACTAAAACAATTTTC+TGG | + | chr2_2:45168677-45168696 | None:intergenic | 20.0% |
| !!! | TGTATCTTTGATTTTAATTG+AGG | - | chr2_2:45168924-45168943 | Msa0253360:CDS | 20.0% |
| !!! | GTATCTTTGATTTTAATTGA+GGG | - | chr2_2:45168925-45168944 | Msa0253360:CDS | 20.0% |
| !!! | AAATTTTTTCACTTCTTTTG+TGG | + | chr2_2:45169018-45169037 | None:intergenic | 20.0% |
| !!! | TTAGTCTGAGATAAAAATAA+TGG | - | chr2_2:45169059-45169078 | Msa0253360:intron | 20.0% |
| !!! | TAGTCTGAGATAAAAATAAT+GGG | - | chr2_2:45169060-45169079 | Msa0253360:intron | 20.0% |
| !!! | GAAGTATCTTTTGATTTTTT+TGG | - | chr2_2:45169087-45169106 | Msa0253360:intron | 20.0% |
| !!! | CCATCTAAATTTTCAATAAA+AGG | + | chr2_2:45169208-45169227 | None:intergenic | 20.0% |
| !!! | CCTTTTATTGAAAATTTAGA+TGG | - | chr2_2:45169205-45169224 | Msa0253360:intron | 20.0% |
| !! | ATAAAACCCTAAATAAAAGA+GGG | + | chr2_2:45169506-45169525 | None:intergenic | 20.0% |
| !!! | TTAGCTTTTATATATAACGA+TGG | + | chr2_2:45169907-45169926 | None:intergenic | 20.0% |
| !!! | TTGAAGTTTAAAATGCTTTT+CGG | - | chr2_2:45170095-45170114 | Msa0253360:intron | 20.0% |
| !!! | AATATCATTTTCAAATTGGT+TGG | - | chr2_2:45170260-45170279 | Msa0253360:intron | 20.0% |
| !!! | AGAATTAGTTTCAAATTGTT+GGG | - | chr2_2:45170487-45170506 | Msa0253360:intron | 20.0% |
| !!! | TGTTTCATAATTTCATTTTC+AGG | - | chr2_2:45170543-45170562 | Msa0253360:intron | 20.0% |
| !!! | ATAATTTCATTTTCAGGTTT+GGG | - | chr2_2:45170549-45170568 | Msa0253360:intron | 20.0% |
| !! | AGGTTTATCTTATATATGTA+TGG | - | chr2_2:45170785-45170804 | Msa0253360:CDS | 20.0% |
| !!! | ATTTGTTTGGTGTTTTATTT+TGG | - | chr2_2:45171024-45171043 | Msa0253360:intron | 20.0% |
| !! | ATCAATCTGCTAAAAATTTA+AGG | - | chr2_2:45171187-45171206 | Msa0253360:intron | 20.0% |
| !!! | ATATGAAATTTTCAAATAGC+TGG | - | chr2_2:45171608-45171627 | Msa0253360:intron | 20.0% |
| !!! | ACATTTTCAGCTTTTAAAAA+TGG | - | chr2_2:45171924-45171943 | Msa0253360:intron | 20.0% |
| ! | TTGCATGTGTAAATTGAATT+AGG | - | chr2_2:45168487-45168506 | Msa0253360:CDS | 25.0% |
| ! | TGCATGTGTAAATTGAATTA+GGG | - | chr2_2:45168488-45168507 | Msa0253360:CDS | 25.0% |
| ! | TGTAAATTGAATTAGGGTTA+GGG | - | chr2_2:45168494-45168513 | Msa0253360:CDS | 25.0% |
| !!! | GGGTTTTTTGATTTTAATTG+AGG | - | chr2_2:45168542-45168561 | Msa0253360:intron | 25.0% |
| !!! | GGTTTGTTTTAGTGATTTTA+GGG | - | chr2_2:45168733-45168752 | Msa0253360:CDS | 25.0% |
| ! | AACAGTGAAACACAAAATTA+AGG | + | chr2_2:45168794-45168813 | None:intergenic | 25.0% |
| !!! | TTTGCATTGATTAGTTGATT+TGG | - | chr2_2:45168816-45168835 | Msa0253360:intron | 25.0% |
| ! | ATTTGAGAGAGAAGAAATAA+TGG | - | chr2_2:45169034-45169053 | Msa0253360:intron | 25.0% |
| ! | TTTGAGAGAGAAGAAATAAT+GGG | - | chr2_2:45169035-45169054 | Msa0253360:intron | 25.0% |
| ! | TTGAAAATTTAGATGGACAA+TGG | - | chr2_2:45169212-45169231 | Msa0253360:intron | 25.0% |
| ! | TAGGAACTGAAAACTAAATT+TGG | - | chr2_2:45169405-45169424 | Msa0253360:CDS | 25.0% |
| ! | CATAAAACCCTAAATAAAAG+AGG | + | chr2_2:45169507-45169526 | None:intergenic | 25.0% |
| !!! | CTCTTTTATTTAGGGTTTTA+TGG | - | chr2_2:45169505-45169524 | Msa0253360:intron | 25.0% |
| ! | CACTGAAATAAATTGTATCA+CGG | - | chr2_2:45169595-45169614 | Msa0253360:intron | 25.0% |
| ! | TCATTAGTGAACACTATAAT+TGG | - | chr2_2:45169927-45169946 | Msa0253360:intron | 25.0% |
| ! | AATGATGTCAATGAGTTATT+TGG | - | chr2_2:45170014-45170033 | Msa0253360:intron | 25.0% |
| ! | ATGATGTCAATGAGTTATTT+GGG | - | chr2_2:45170015-45170034 | Msa0253360:intron | 25.0% |
| !!! | TGATGTTGATAATGAATTTG+AGG | - | chr2_2:45170040-45170059 | Msa0253360:intron | 25.0% |
| ! | ATTACTACTTCTGATAAAAG+TGG | + | chr2_2:45170243-45170262 | None:intergenic | 25.0% |
| !! | CAGAATTAGTTTCAAATTGT+TGG | - | chr2_2:45170486-45170505 | Msa0253360:intron | 25.0% |
| ! | ATGAAACATCATTTGCATAA+CGG | + | chr2_2:45170531-45170550 | None:intergenic | 25.0% |
| !!! | CATAATTTCATTTTCAGGTT+TGG | - | chr2_2:45170548-45170567 | Msa0253360:intron | 25.0% |
| !!! | ACAAAAGAGAAATTTTTTGC+AGG | - | chr2_2:45170651-45170670 | Msa0253360:intron | 25.0% |
| ! | CCTATAATAACTATCAAGTT+AGG | + | chr2_2:45170688-45170707 | None:intergenic | 25.0% |
| !! | CCTAACTTGATAGTTATTAT+AGG | - | chr2_2:45170685-45170704 | Msa0253360:intron | 25.0% |
| ! | TGAAATTGATGAAGTCAATA+AGG | - | chr2_2:45170765-45170784 | Msa0253360:CDS | 25.0% |
| ! | ATCTTATATATGTATGGATG+TGG | - | chr2_2:45170791-45170810 | Msa0253360:intron | 25.0% |
| ! | AATAAAAGAGAAACAACTCA+AGG | + | chr2_2:45170882-45170901 | None:intergenic | 25.0% |
| !! | TGTTATATTGATTGGGAATA+TGG | - | chr2_2:45170907-45170926 | Msa0253360:intron | 25.0% |
| !!! | TAATGCACAAGATATTTTTG+TGG | - | chr2_2:45171059-45171078 | Msa0253360:intron | 25.0% |
| !! | TAGCAATTTTTCTCTGAATT+TGG | - | chr2_2:45171095-45171114 | Msa0253360:intron | 25.0% |
| ! | TCGTTTAGTCAAATTATGTA+TGG | - | chr2_2:45171290-45171309 | Msa0253360:intron | 25.0% |
| ! | ACATTAAACAGACAAAAGAA+AGG | + | chr2_2:45171521-45171540 | None:intergenic | 25.0% |
| !! | ATTTTCCATTGACATTATCT+TGG | - | chr2_2:45171577-45171596 | Msa0253360:intron | 25.0% |
| !! | ATCATATATACTTTTCACGA+AGG | + | chr2_2:45171654-45171673 | None:intergenic | 25.0% |
| ! | TTCAAAATGAAACTTACCTA+AGG | - | chr2_2:45171684-45171703 | Msa0253360:intron | 25.0% |
| ! | ACCTAAGGAAAAAAAAAAGT+TGG | - | chr2_2:45171699-45171718 | Msa0253360:intron | 25.0% |
| !!! | ACCAACTTTTTTTTTTCCTT+AGG | + | chr2_2:45171703-45171722 | None:intergenic | 25.0% |
| !!! | CATTTGTTTTTCATATCCTT+TGG | - | chr2_2:45171996-45172015 | Msa0253360:intron | 25.0% |
| !! | TTTTTCATATCCTTTGGATT+AGG | - | chr2_2:45172002-45172021 | Msa0253360:intron | 25.0% |
| !! | GAACAATTTTATATACCTGT+AGG | + | chr2_2:45172145-45172164 | None:intergenic | 25.0% |
| ! | GTATTCTCTATTATTACAGT+TGG | - | chr2_2:45172268-45172287 | Msa0253360:intron | 25.0% |
| ! | GAATACTTACAACAACAATT+TGG | + | chr2_2:45172362-45172381 | None:intergenic | 25.0% |
| !! | TGTTGTAAGTATTCTCTTTT+AGG | - | chr2_2:45172368-45172387 | Msa0253360:CDS | 25.0% |
| TTTACACATGCAAATTCTGA+AGG | + | chr2_2:45168480-45168499 | None:intergenic | 30.0% | |
| GTGTAAATTGAATTAGGGTT+AGG | - | chr2_2:45168493-45168512 | Msa0253360:CDS | 30.0% | |
| !!! | TAATTGAGGTTTTGATTCCT+TGG | - | chr2_2:45168556-45168575 | Msa0253360:intron | 30.0% |
| TAAACAACAACACAAAACCA+AGG | + | chr2_2:45168576-45168595 | None:intergenic | 30.0% | |
| !!! | GATTTTAGGGTTTCATTTCT+TGG | - | chr2_2:45168692-45168711 | Msa0253360:CDS | 30.0% |
| !!! | TTGGTTTTGGGTTTGATTTT+AGG | - | chr2_2:45168711-45168730 | Msa0253360:CDS | 30.0% |
| !!! | TGGTTTTGGGTTTGATTTTA+GGG | - | chr2_2:45168712-45168731 | Msa0253360:CDS | 30.0% |
| !!! | GGGTTTGTTTTAGTGATTTT+AGG | - | chr2_2:45168732-45168751 | Msa0253360:CDS | 30.0% |
| !! | ATTAGTTGATTTGGAATGAC+AGG | - | chr2_2:45168825-45168844 | Msa0253360:intron | 30.0% |
| !! | TTAGTTGATTTGGAATGACA+GGG | - | chr2_2:45168826-45168845 | Msa0253360:intron | 30.0% |
| !!! | TTTGATTTTAATTGAGGGTC+TGG | - | chr2_2:45168930-45168949 | Msa0253360:CDS | 30.0% |
| ACTTTCACAGTGATTTAGTT+AGG | - | chr2_2:45169386-45169405 | Msa0253360:CDS | 30.0% | |
| AAGAATAGTGAGAGTAGAAT+TGG | - | chr2_2:45169539-45169558 | Msa0253360:intron | 30.0% | |
| TGAAATAAATTGTATCACGG+AGG | - | chr2_2:45169598-45169617 | Msa0253360:intron | 30.0% | |
| AAAAACATACCTGAATTCGA+CGG | + | chr2_2:45169862-45169881 | None:intergenic | 30.0% | |
| !!! | CAGGTATGTTTTTAGTCTAT+AGG | - | chr2_2:45169869-45169888 | Msa0253360:intron | 30.0% |
| !!! | TTTTTTAGGCGTCGAAATTA+AGG | - | chr2_2:45169989-45170008 | Msa0253360:intron | 30.0% |
| TGATGTCAATGAGTTATTTG+GGG | - | chr2_2:45170016-45170035 | Msa0253360:intron | 30.0% | |
| !!! | TTCATTGCATCTTTTTTTGC+AGG | - | chr2_2:45170355-45170374 | Msa0253360:CDS | 30.0% |
| ! | CGTTGTCTAATTTTGCAAAT+TGG | + | chr2_2:45170392-45170411 | None:intergenic | 30.0% |
| AATGATGTAAACATGTCTGA+TGG | - | chr2_2:45170710-45170729 | Msa0253360:intron | 30.0% | |
| TGTGTCTTGAATTTATGTTG+TGG | - | chr2_2:45170948-45170967 | Msa0253360:CDS | 30.0% | |
| AGGAAAGCAGTTATCAAAAA+AGG | + | chr2_2:45170975-45170994 | None:intergenic | 30.0% | |
| !! | TTGATAACTGCTTTCCTTTT+TGG | - | chr2_2:45170978-45170997 | Msa0253360:CDS | 30.0% |
| AAAATTGCTATATCTAGCCA+AGG | + | chr2_2:45171085-45171104 | None:intergenic | 30.0% | |
| ATTGAGGAGAATAAAAGTTG+AGG | - | chr2_2:45171151-45171170 | Msa0253360:intron | 30.0% | |
| TTGAATACTTAGTCTATTGC+TGG | - | chr2_2:45171214-45171233 | Msa0253360:intron | 30.0% | |
| TGAATACTTAGTCTATTGCT+GGG | - | chr2_2:45171215-45171234 | Msa0253360:intron | 30.0% | |
| TCTCTATGTGATGAAGAATT+CGG | - | chr2_2:45171457-45171476 | Msa0253360:intron | 30.0% | |
| CTTGTGAACATTAAGAATTC+AGG | - | chr2_2:45171545-45171564 | Msa0253360:intron | 30.0% | |
| !! | ATATTGAGTACTGAAGATCA+TGG | - | chr2_2:45171735-45171754 | Msa0253360:intron | 30.0% |
| !! | AAACTGAGAAGAGGTTTTAT+TGG | + | chr2_2:45171781-45171800 | None:intergenic | 30.0% |
| AATATCGAAAAACTGAGAAG+AGG | + | chr2_2:45171790-45171809 | None:intergenic | 30.0% | |
| TAAGAGGAATTATTAGGAAC+AGG | + | chr2_2:45171816-45171835 | None:intergenic | 30.0% | |
| ! | CTCTTCTAAGAGGAATTATT+AGG | + | chr2_2:45171822-45171841 | None:intergenic | 30.0% |
| AGAATTGGACATTCACAAAA+TGG | - | chr2_2:45171843-45171862 | Msa0253360:intron | 30.0% | |
| GAATTGGACATTCACAAAAT+GGG | - | chr2_2:45171844-45171863 | Msa0253360:intron | 30.0% | |
| AATTGGACATTCACAAAATG+GGG | - | chr2_2:45171845-45171864 | Msa0253360:intron | 30.0% | |
| ! | TTGATCTTTCGACATTTTTC+AGG | + | chr2_2:45171893-45171912 | None:intergenic | 30.0% |
| TTCTCTATTATTACAGTTGG+AGG | - | chr2_2:45172271-45172290 | Msa0253360:intron | 30.0% | |
| TCTCTATTATTACAGTTGGA+GGG | - | chr2_2:45172272-45172291 | Msa0253360:intron | 30.0% | |
| ! | TGATAATGTTCTTCAGAGCT+GGG | + | chr2_2:45168418-45168437 | None:intergenic | 35.0% |
| CTGAAGAACATTATCAGGAT+CGG | - | chr2_2:45168422-45168441 | Msa0253360:intron | 35.0% | |
| ! | TGCTTGCATGTTTTCAGAAA+AGG | - | chr2_2:45168521-45168540 | Msa0253360:CDS | 35.0% |
| ! | GCTTGCATGTTTTCAGAAAA+GGG | - | chr2_2:45168522-45168541 | Msa0253360:CDS | 35.0% |
| ! | AGGGTTTCATTTCTTGGTTT+TGG | - | chr2_2:45168698-45168717 | Msa0253360:CDS | 35.0% |
| !! | GGGTTTCATTTCTTGGTTTT+GGG | - | chr2_2:45168699-45168718 | Msa0253360:CDS | 35.0% |
| !! | TAGTTGATTTGGAATGACAG+GGG | - | chr2_2:45168827-45168846 | Msa0253360:intron | 35.0% |
| TTTGACGATGCTAATGTTTG+TGG | - | chr2_2:45168870-45168889 | Msa0253360:intron | 35.0% | |
| ! | TTAGATGGACAATGGATTTG+AGG | - | chr2_2:45169220-45169239 | Msa0253360:intron | 35.0% |
| ! | ACAAGCAGCTTTTGATATGA+TGG | - | chr2_2:45169247-45169266 | Msa0253360:intron | 35.0% |
| CAGTCAACAGAGGAAAAAAA+GGG | - | chr2_2:45169274-45169293 | Msa0253360:intron | 35.0% | |
| ATGCTTCTGATCCTTTGATT+TGG | - | chr2_2:45169466-45169485 | Msa0253360:intron | 35.0% | |
| ! | TGCTTCTGATCCTTTGATTT+GGG | - | chr2_2:45169467-45169486 | Msa0253360:intron | 35.0% |
| AAATAAAAGAGGGCTCATCA+AGG | + | chr2_2:45169496-45169515 | None:intergenic | 35.0% | |
| !! | TGATGAGCCCTCTTTTATTT+AGG | - | chr2_2:45169496-45169515 | Msa0253360:intron | 35.0% |
| !! | GATGAGCCCTCTTTTATTTA+GGG | - | chr2_2:45169497-45169516 | Msa0253360:intron | 35.0% |
| CGGAGGAAACAATCAATATT+AGG | - | chr2_2:45169615-45169634 | Msa0253360:intron | 35.0% | |
| TATATATCAGACATGCCCTT+AGG | - | chr2_2:45169784-45169803 | Msa0253360:CDS | 35.0% | |
| ATATATCAGACATGCCCTTA+GGG | - | chr2_2:45169785-45169804 | Msa0253360:CDS | 35.0% | |
| TAATGATGCTAGCAACTCTA+TGG | - | chr2_2:45170118-45170137 | Msa0253360:intron | 35.0% | |
| TTCAAAAACACCAGCAACTT+AGG | + | chr2_2:45170592-45170611 | None:intergenic | 35.0% | |
| CAAGAAACCTCATTCCAAAA+AGG | + | chr2_2:45170995-45171014 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGAATGAGGTTTCT+TGG | - | chr2_2:45170993-45171012 | Msa0253360:intron | 35.0% |
| !!! | TGGTGTTTTATTTTGGAGTG+AGG | - | chr2_2:45171031-45171050 | Msa0253360:intron | 35.0% |
| !! | ACAAGATATTTTTGTGGCCT+TGG | - | chr2_2:45171065-45171084 | Msa0253360:intron | 35.0% |
| ! | GAATTTGGTTCATTTAACCG+AGG | - | chr2_2:45171110-45171129 | Msa0253360:intron | 35.0% |
| AGTCGAAACACAATGTATTG+AGG | - | chr2_2:45171135-45171154 | Msa0253360:intron | 35.0% | |
| ! | TATGTATGGCATTGAAATCC+AGG | - | chr2_2:45171304-45171323 | Msa0253360:intron | 35.0% |
| ! | ATGTATGGCATTGAAATCCA+GGG | - | chr2_2:45171305-45171324 | Msa0253360:intron | 35.0% |
| ATTGAAATCCAGGGAAATCT+TGG | - | chr2_2:45171314-45171333 | Msa0253360:intron | 35.0% | |
| AGGTACCAAGATAATGTCAA+TGG | + | chr2_2:45171585-45171604 | None:intergenic | 35.0% | |
| TCCTCTTAGAAGAGTAGAAT+TGG | - | chr2_2:45171828-45171847 | Msa0253360:intron | 35.0% | |
| TCCAATTCTACTCTTCTAAG+AGG | + | chr2_2:45171832-45171851 | None:intergenic | 35.0% | |
| ATTGCCTTGGAAAACTGATA+CGG | + | chr2_2:45171966-45171985 | None:intergenic | 35.0% | |
| ATGATGAGAAAGAATTGCCT+TGG | + | chr2_2:45171979-45171998 | None:intergenic | 35.0% | |
| AGACAAATTGTCTTCTTCAC+TGG | - | chr2_2:45172118-45172137 | Msa0253360:intron | 35.0% | |
| AATGCAACATGTGGGAATAT+TGG | - | chr2_2:45172301-45172320 | Msa0253360:intron | 35.0% | |
| AAGAAGAAGGTTTGAAAGGA+TGG | + | chr2_2:45172396-45172415 | None:intergenic | 35.0% | |
| ! | CTGATAATGTTCTTCAGAGC+TGG | + | chr2_2:45168419-45168438 | None:intergenic | 40.0% |
| !! | CAGCTCTGAAGAACATTATC+AGG | - | chr2_2:45168417-45168436 | Msa0253360:intron | 40.0% |
| !!! | AGGGTCTGGTCTTTTGATTT+TGG | - | chr2_2:45168944-45168963 | Msa0253360:CDS | 40.0% |
| !!! | GGGTCTGGTCTTTTGATTTT+GGG | - | chr2_2:45168945-45168964 | Msa0253360:CDS | 40.0% |
| ! | ATGGACAATGGATTTGAGGA+TGG | - | chr2_2:45169224-45169243 | Msa0253360:intron | 40.0% |
| GCAGTCAACAGAGGAAAAAA+AGG | - | chr2_2:45169273-45169292 | Msa0253360:intron | 40.0% | |
| AATCACTGTGAAAGTGAGAG+TGG | + | chr2_2:45169381-45169400 | None:intergenic | 40.0% | |
| ATCAAGGACTCCCAAATCAA+AGG | + | chr2_2:45169480-45169499 | None:intergenic | 40.0% | |
| CGACGGTACATTTGAATCTT+CGG | + | chr2_2:45169845-45169864 | None:intergenic | 40.0% | |
| TCAAATGTACCGTCGAATTC+AGG | - | chr2_2:45169850-45169869 | Msa0253360:intron | 40.0% | |
| TAGCAACTCTATGGAGTCAT+TGG | - | chr2_2:45170127-45170146 | Msa0253360:intron | 40.0% | |
| TAGCCATAACCTGCAATTGT+TGG | - | chr2_2:45170152-45170171 | Msa0253360:CDS | 40.0% | |
| CTTCCAACAATTGCAGGTTA+TGG | + | chr2_2:45170158-45170177 | None:intergenic | 40.0% | |
| CATAACCTGCAATTGTTGGA+AGG | - | chr2_2:45170156-45170175 | Msa0253360:CDS | 40.0% | |
| TCATACCTTCCAACAATTGC+AGG | + | chr2_2:45170164-45170183 | None:intergenic | 40.0% | |
| ! | GCAATTGTTGGAAGGTATGA+TGG | - | chr2_2:45170164-45170183 | Msa0253360:CDS | 40.0% |
| ATTAGTACATCACACACGCA+AGG | + | chr2_2:45170741-45170760 | None:intergenic | 40.0% | |
| TTGCGTGTGTGATGTACTAA+TGG | - | chr2_2:45170740-45170759 | Msa0253360:CDS | 40.0% | |
| TGCGTGTGTGATGTACTAAT+GGG | - | chr2_2:45170741-45170760 | Msa0253360:CDS | 40.0% | |
| ACTGGTAGGTGTTTGGAAAT+GGG | - | chr2_2:45170853-45170872 | Msa0253360:intron | 40.0% | |
| !!! | CTGCTTTCCTTTTTGGAATG+AGG | - | chr2_2:45170985-45171004 | Msa0253360:CDS | 40.0% |
| ! | CTTGGTGCACAAGATTTGTT+TGG | - | chr2_2:45171011-45171030 | Msa0253360:intron | 40.0% |
| !! | ATACTTGCGACTTGGTTTAG+TGG | - | chr2_2:45171389-45171408 | Msa0253360:intron | 40.0% |
| ! | ATCTCCGTATCAGTTTTCCA+AGG | - | chr2_2:45171959-45171978 | Msa0253360:intron | 40.0% |
| ! | CTTTGGATTAGGTGAAGATC+CGG | - | chr2_2:45172013-45172032 | Msa0253360:intron | 40.0% |
| CTAGTGTACAAAATCAGTGC+CGG | + | chr2_2:45172035-45172054 | None:intergenic | 40.0% | |
| !!! | GCACTGATTTTGTACACTAG+CGG | - | chr2_2:45172035-45172054 | Msa0253360:intron | 40.0% |
| !!! | CACTGATTTTGTACACTAGC+GGG | - | chr2_2:45172036-45172055 | Msa0253360:intron | 40.0% |
| GGCTTCTTAATGCAACATGT+GGG | - | chr2_2:45172293-45172312 | Msa0253360:intron | 40.0% | |
| GCACAAGAAGAAGGTTTGAA+AGG | + | chr2_2:45172400-45172419 | None:intergenic | 40.0% | |
| TCAAACCTTCTTCTTGTGCT+TGG | - | chr2_2:45172401-45172420 | Msa0253360:CDS | 40.0% | |
| AAGTTCCAAGCACAAGAAGA+AGG | + | chr2_2:45172409-45172428 | None:intergenic | 40.0% | |
| !! | CATATTTTTGCTCCACTCCA+AGG | + | chr2_2:45172457-45172476 | None:intergenic | 40.0% |
| ATGTTCTTCAGAGCTGGGTA+TGG | + | chr2_2:45168413-45168432 | None:intergenic | 45.0% | |
| GAACATTATCAGGATCGGTG+AGG | - | chr2_2:45168427-45168446 | Msa0253360:intron | 45.0% | |
| TGTGAAAGTGAGAGTGGTGA+TGG | + | chr2_2:45169375-45169394 | None:intergenic | 45.0% | |
| CTCAAGACCTGATGTTGTTG+TGG | - | chr2_2:45170445-45170464 | Msa0253360:intron | 45.0% | |
| AGACCTGATGTTGTTGTGGT+AGG | - | chr2_2:45170449-45170468 | Msa0253360:intron | 45.0% | |
| ACTCCTACCACAACAACATC+AGG | + | chr2_2:45170455-45170474 | None:intergenic | 45.0% | |
| ! | TTGGGTATCCGCTTCTTTTG+AGG | - | chr2_2:45170505-45170524 | Msa0253360:intron | 45.0% |
| CATAACGGCCTCAAAAGAAG+CGG | + | chr2_2:45170516-45170535 | None:intergenic | 45.0% | |
| ! | CTCTTTTGTGACCAATGCCT+AGG | + | chr2_2:45170640-45170659 | None:intergenic | 45.0% |
| GCGTGTGTGATGTACTAATG+GGG | - | chr2_2:45170742-45170761 | Msa0253360:CDS | 45.0% | |
| TGTATGGATGTGGTTCTTGC+AGG | - | chr2_2:45170801-45170820 | Msa0253360:intron | 45.0% | |
| GTATGGATGTGGTTCTTGCA+GGG | - | chr2_2:45170802-45170821 | Msa0253360:intron | 45.0% | |
| TATGGATGTGGTTCTTGCAG+GGG | - | chr2_2:45170803-45170822 | Msa0253360:intron | 45.0% | |
| GACTGGTAGGTGTTTGGAAA+TGG | - | chr2_2:45170852-45170871 | Msa0253360:intron | 45.0% | |
| CATTGTGTTTCGACTGTCCT+CGG | + | chr2_2:45171130-45171149 | None:intergenic | 45.0% | |
| GAAATCCAGGGAAATCTTGG+TGG | - | chr2_2:45171317-45171336 | Msa0253360:intron | 45.0% | |
| AATCTTGGTGGAGCTCGAAT+AGG | - | chr2_2:45171329-45171348 | Msa0253360:intron | 45.0% | |
| CCAGCAACAAATTCAGCAGA+CGG | + | chr2_2:45171368-45171387 | None:intergenic | 45.0% | |
| TTGCTGGAATACTTGCGACT+TGG | - | chr2_2:45171381-45171400 | Msa0253360:intron | 45.0% | |
| CGGATCTTCACCTAATCCAA+AGG | + | chr2_2:45172015-45172034 | None:intergenic | 45.0% | |
| GGGCTTCTTAATGCAACATG+TGG | - | chr2_2:45172292-45172311 | Msa0253360:intron | 45.0% | |
| CTTGGAACTTCCCTACTTTG+TGG | - | chr2_2:45172419-45172438 | Msa0253360:CDS | 45.0% | |
| TGCAATGCCACCACAAAGTA+GGG | + | chr2_2:45172432-45172451 | None:intergenic | 45.0% | |
| TTGCAATGCCACCACAAAGT+AGG | + | chr2_2:45172433-45172452 | None:intergenic | 45.0% | |
| !!! | TAATTAGATATTATTTTTTT+AGG | - | chr2_2:45169975-45169994 | Msa0253360:intron | 5.0% |
| TTCTTCAGAGCTGGGTATGG+CGG | + | chr2_2:45168410-45168429 | None:intergenic | 50.0% | |
| TGATGGCAAGCAGTCAACAG+AGG | - | chr2_2:45169264-45169283 | Msa0253360:intron | 50.0% | |
| !! | GAAAGTGAGAGTGGTGATGG+AGG | + | chr2_2:45169372-45169391 | None:intergenic | 50.0% |
| ATCAGACATGCCCTTAGGGA+TGG | - | chr2_2:45169789-45169808 | Msa0253360:CDS | 50.0% | |
| AGCCATCCATCCATCCCTAA+GGG | + | chr2_2:45169802-45169821 | None:intergenic | 50.0% | |
| AAGCCATCCATCCATCCCTA+AGG | + | chr2_2:45169803-45169822 | None:intergenic | 50.0% | |
| ! | TTTGAGGACACTGCTGCTTC+AGG | - | chr2_2:45170056-45170075 | Msa0253360:intron | 50.0% |
| TGCAGCAGATCCTAAGTTGC+TGG | - | chr2_2:45170579-45170598 | Msa0253360:intron | 50.0% | |
| GCTTTGGCAATCACCAATCC+TGG | - | chr2_2:45170830-45170849 | Msa0253360:intron | 50.0% | |
| !! | ATCACCAATCCTGGACTGGT+AGG | - | chr2_2:45170839-45170858 | Msa0253360:intron | 50.0% |
| AACACCTACCAGTCCAGGAT+TGG | + | chr2_2:45170846-45170865 | None:intergenic | 50.0% | |
| !! | ATCCTGGACTGGTAGGTGTT+TGG | - | chr2_2:45170846-45170865 | Msa0253360:intron | 50.0% |
| TTCCAAACACCTACCAGTCC+AGG | + | chr2_2:45170851-45170870 | None:intergenic | 50.0% | |
| !! | CCGTCTGCTGAATTTGTTGC+TGG | - | chr2_2:45171365-45171384 | Msa0253360:intron | 50.0% |
| !! | CTTGCGACTTGGTTTAGTGG+AGG | - | chr2_2:45171392-45171411 | Msa0253360:intron | 50.0% |
| TCTGCATAGCTGAGTGCAAG+TGG | + | chr2_2:45171428-45171447 | None:intergenic | 50.0% | |
| TTGTACACTAGCGGGACAAC+AGG | - | chr2_2:45172044-45172063 | Msa0253360:intron | 50.0% | |
| GTCTTCTTCACTGGTCCTAC+AGG | - | chr2_2:45172127-45172146 | Msa0253360:intron | 50.0% | |
| GGAACTTCCCTACTTTGTGG+TGG | - | chr2_2:45172422-45172441 | Msa0253360:CDS | 50.0% | |
| TGTGGTGGCATTGCAAACCT+TGG | - | chr2_2:45172437-45172456 | Msa0253360:exon | 50.0% | |
| TGGCATTGCAAACCTTGGAG+TGG | - | chr2_2:45172442-45172461 | Msa0253360:exon | 50.0% | |
| GACATGCCCTTAGGGATGGA+TGG | - | chr2_2:45169793-45169812 | Msa0253360:CDS | 55.0% | |
| TGCCCTTAGGGATGGATGGA+TGG | - | chr2_2:45169797-45169816 | Msa0253360:CDS | 55.0% | |
| GTAACACCGTACCTGCACCT+AGG | - | chr2_2:45170620-45170639 | Msa0253360:intron | 55.0% | |
| CCAATGCCTAGGTGCAGGTA+CGG | + | chr2_2:45170629-45170648 | None:intergenic | 55.0% | |
| TGTGACCAATGCCTAGGTGC+AGG | + | chr2_2:45170634-45170653 | None:intergenic | 55.0% | |
| ATGTGGTTCTTGCAGGGGAG+CGG | - | chr2_2:45170808-45170827 | Msa0253360:intron | 55.0% | |
| GGCAATCACCAATCCTGGAC+TGG | - | chr2_2:45170835-45170854 | Msa0253360:intron | 55.0% | |
| GAGCTCCACCAAGATTTCCC+TGG | + | chr2_2:45171325-45171344 | None:intergenic | 55.0% | |
| CGGCGGTGAGAAGAAGATCG+CGG | + | chr2_2:45168374-45168393 | None:intergenic | 60.0% | |
| ! | AGAGCTGGGTATGGCGGAGA+CGG | + | chr2_2:45168404-45168423 | None:intergenic | 60.0% |
| CCGTACCTGCACCTAGGCAT+TGG | - | chr2_2:45170626-45170645 | Msa0253360:intron | 60.0% | |
| TTCTTGCAGGGGAGCGGCTT+TGG | - | chr2_2:45170814-45170833 | Msa0253360:intron | 60.0% | |
| ! | ATGGCGGAGACGGCGAGGTA+CGG | + | chr2_2:45168394-45168413 | None:intergenic | 65.0% |
| ! | TGGGTATGGCGGAGACGGCG+AGG | + | chr2_2:45168399-45168418 | None:intergenic | 70.0% |
| GCGGAGACGGCGAGGTACGG+CGG | + | chr2_2:45168391-45168410 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 45168311 | 45172493 | 45168311 | ID=Msa0253360;Name=Msa0253360 |
| chr2_2 | mRNA | 45168311 | 45172493 | 45168311 | ID=Msa0253360-mRNA-1;Parent=Msa0253360;Name=Msa0253360-mRNA-1;_AED=0.27;_eAED=0.27;_QI=45|0.41|0.53|1|0.75|0.76|13|0|381 |
| chr2_2 | exon | 45168311 | 45168414 | 45168311 | ID=Msa0253360-mRNA-1:exon:13915;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45168482 | 45168548 | 45168482 | ID=Msa0253360-mRNA-1:exon:13914;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45168656 | 45168780 | 45168656 | ID=Msa0253360-mRNA-1:exon:13913;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45168892 | 45168964 | 45168892 | ID=Msa0253360-mRNA-1:exon:13912;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45169326 | 45169478 | 45169326 | ID=Msa0253360-mRNA-1:exon:13911;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45169752 | 45169857 | 45169752 | ID=Msa0253360-mRNA-1:exon:13910;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45169944 | 45169981 | 45169944 | ID=Msa0253360-mRNA-1:exon:13909;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45170132 | 45170239 | 45170132 | ID=Msa0253360-mRNA-1:exon:13908;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45170338 | 45170427 | 45170338 | ID=Msa0253360-mRNA-1:exon:13907;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45170627 | 45170661 | 45170627 | ID=Msa0253360-mRNA-1:exon:13906;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45170727 | 45170807 | 45170727 | ID=Msa0253360-mRNA-1:exon:13905;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45170933 | 45171010 | 45170933 | ID=Msa0253360-mRNA-1:exon:13904;Parent=Msa0253360-mRNA-1 |
| chr2_2 | exon | 45172361 | 45172493 | 45172361 | ID=Msa0253360-mRNA-1:exon:13903;Parent=Msa0253360-mRNA-1 |
| chr2_2 | five_prime_UTR | 45172449 | 45172493 | 45172449 | ID=Msa0253360-mRNA-1:five_prime_utr;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45172361 | 45172448 | 45172361 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45170933 | 45171010 | 45170933 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45170727 | 45170807 | 45170727 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45170627 | 45170661 | 45170627 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45170338 | 45170427 | 45170338 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45170132 | 45170239 | 45170132 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45169944 | 45169981 | 45169944 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45169752 | 45169857 | 45169752 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45169326 | 45169478 | 45169326 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45168892 | 45168964 | 45168892 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45168656 | 45168780 | 45168656 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45168482 | 45168548 | 45168482 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| chr2_2 | CDS | 45168311 | 45168414 | 45168311 | ID=Msa0253360-mRNA-1:cds;Parent=Msa0253360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
