Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263510 | XP_003597225.2 | 97.600 | 500 | 7 | 2 | 1 | 498 | 1 | 497 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263510 | G7IRR0 | 97.600 | 500 | 7 | 2 | 1 | 498 | 1 | 497 | 0.0 | 1005 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0263510 | Msa0338660 | 0.992311 | 1.557421e-192 | -8.615850e-47 |
| Msa0263510 | Msa0498080 | 0.821715 | 3.483697e-53 | -8.615850e-47 |
| Msa0263510 | Msa1370630 | 0.802055 | 6.726106e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263510 | MtrunA17_Chr2g0326551 | 96.634 | 505 | 7 | 3 | 1 | 498 | 1 | 502 | 0.0 | 998 |
| Msa0263510 | MtrunA17_Chr4g0029221 | 58.161 | 533 | 176 | 13 | 1 | 498 | 1 | 521 | 0.0 | 541 |
| Msa0263510 | MtrunA17_Chr1g0181371 | 44.792 | 480 | 230 | 13 | 25 | 499 | 46 | 495 | 2.01e-123 | 370 |
| Msa0263510 | MtrunA17_Chr3g0120281 | 45.308 | 373 | 184 | 10 | 89 | 446 | 71 | 438 | 2.19e-97 | 302 |
| Msa0263510 | MtrunA17_Chr2g0286611 | 33.424 | 368 | 207 | 8 | 95 | 447 | 61 | 405 | 1.84e-59 | 201 |
| Msa0263510 | MtrunA17_Chr7g0246271 | 39.412 | 170 | 88 | 4 | 247 | 414 | 45 | 201 | 6.04e-30 | 116 |
| Msa0263510 | MtrunA17_Chr7g0246251 | 32.828 | 198 | 93 | 4 | 265 | 434 | 1 | 186 | 1.43e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263510 | AT5G60580.1 | 52.654 | 471 | 191 | 14 | 24 | 488 | 43 | 487 | 2.55e-136 | 403 |
| Msa0263510 | AT5G60580.3 | 52.654 | 471 | 191 | 14 | 24 | 488 | 43 | 487 | 2.55e-136 | 403 |
| Msa0263510 | AT5G60580.4 | 51.992 | 477 | 190 | 15 | 25 | 488 | 44 | 494 | 1.06e-133 | 396 |
| Msa0263510 | AT5G60580.2 | 51.992 | 477 | 190 | 15 | 25 | 488 | 44 | 494 | 1.06e-133 | 396 |
| Msa0263510 | AT3G09760.1 | 44.000 | 450 | 217 | 13 | 10 | 448 | 36 | 461 | 9.03e-109 | 332 |
| Msa0263510 | AT5G03180.1 | 46.467 | 368 | 166 | 9 | 95 | 448 | 97 | 447 | 6.50e-98 | 303 |
| Msa0263510 | AT5G03180.4 | 45.968 | 372 | 166 | 10 | 95 | 448 | 62 | 416 | 2.90e-96 | 298 |
| Msa0263510 | AT5G03180.2 | 45.968 | 372 | 166 | 10 | 95 | 448 | 97 | 451 | 6.38e-96 | 298 |
| Msa0263510 | AT5G03180.5 | 45.875 | 303 | 136 | 8 | 95 | 386 | 97 | 382 | 9.31e-72 | 234 |
| Msa0263510 | AT5G03180.3 | 45.277 | 307 | 136 | 9 | 95 | 386 | 97 | 386 | 7.88e-70 | 229 |
| Msa0263510 | AT3G06330.1 | 35.278 | 360 | 209 | 6 | 94 | 449 | 79 | 418 | 3.06e-59 | 201 |
| Msa0263510 | AT3G06330.4 | 45.588 | 204 | 109 | 2 | 247 | 449 | 105 | 307 | 7.13e-59 | 197 |
| Msa0263510 | AT3G06330.2 | 45.588 | 204 | 109 | 2 | 247 | 449 | 47 | 249 | 1.22e-58 | 194 |
| Msa0263510 | AT5G18760.1 | 44.444 | 189 | 103 | 2 | 247 | 434 | 201 | 388 | 1.26e-46 | 167 |
| Msa0263510 | AT3G06330.3 | 35.959 | 292 | 163 | 6 | 94 | 381 | 79 | 350 | 2.52e-42 | 154 |
| Msa0263510 | AT5G18760.2 | 53.571 | 112 | 50 | 2 | 247 | 357 | 201 | 311 | 4.49e-32 | 126 |
| Msa0263510 | AT2G37950.1 | 41.176 | 68 | 39 | 1 | 237 | 303 | 72 | 139 | 2.00e-11 | 63.9 |
Find 123 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGCAGGTTGGGAAAA+TGG | 0.138378 | 2_2:+62951395 | Msa0263510:intron |
| TCATTACCTGTTGAAGAAAT+TGG | 0.156769 | 2_2:+62949410 | Msa0263510:CDS |
| ACCACTTAATTGCACATTCT+TGG | 0.227943 | 2_2:-62950445 | None:intergenic |
| ATTCTTCTTGCATCATTTGC+TGG | 0.234700 | 2_2:+62951934 | Msa0263510:CDS |
| TGCATCTGCTCAGTTTCTTT+TGG | 0.242323 | 2_2:+62951744 | Msa0263510:CDS |
| CACTGTGGTTTGGTTGTGAT+TGG | 0.245302 | 2_2:-62952115 | None:intergenic |
| GATATTGAAAAGGCGGTAAT+TGG | 0.260281 | 2_2:+62949287 | Msa0263510:CDS |
| TATTTAATCCTAAGATTAAT+AGG | 0.267421 | 2_2:+62949381 | Msa0263510:CDS |
| AAGAAAATGCTAATTAAATT+AGG | 0.267688 | 2_2:-62948608 | None:intergenic |
| GGTTGGTAAGCAAGCAGTTT+TGG | 0.274738 | 2_2:+62951909 | Msa0263510:intron |
| CTTGGGACAATAGGTTTCTA+TGG | 0.276816 | 2_2:+62952301 | Msa0263510:three_prime_UTR |
| TATTACCAAAACTGAATTTC+AGG | 0.277001 | 2_2:+62949243 | Msa0263510:CDS |
| CTTGCATCATTTGCTGGGTT+TGG | 0.287597 | 2_2:+62951940 | Msa0263510:CDS |
| GATGAAGTCCTATTAATCTT+AGG | 0.290773 | 2_2:-62949389 | None:intergenic |
| GAAGGTGGACTTGGTGTTAA+TGG | 0.301043 | 2_2:-62949104 | None:intergenic |
| AACTGAATTTCAGGTATAAT+AGG | 0.331782 | 2_2:+62949252 | Msa0263510:CDS |
| AGGGAACAACTTGGGACAAT+AGG | 0.346073 | 2_2:+62952292 | Msa0263510:three_prime_UTR |
| ACTGAATTGAAGTCTATATA+TGG | 0.346434 | 2_2:+62952170 | Msa0263510:exon |
| CAGTGAGGAGCAAGTTCATC+TGG | 0.356091 | 2_2:+62951716 | Msa0263510:intron |
| TTATACCTGAAATTCAGTTT+TGG | 0.359041 | 2_2:-62949248 | None:intergenic |
| AAGTTGAGCATTTATGAAAC+AGG | 0.361653 | 2_2:-62948563 | None:intergenic |
| TACATTGTGCTTGCTGCAAT+AGG | 0.366210 | 2_2:+62952272 | Msa0263510:three_prime_UTR |
| AGACCGAGTACACAGGAAAA+TGG | 0.367823 | 2_2:-62951444 | None:intergenic |
| AGATTCTTCTGATGACTTGC+AGG | 0.375467 | 2_2:-62949042 | None:intergenic |
| ATTGATAATAATATCAATCT+TGG | 0.380971 | 2_2:+62949179 | Msa0263510:CDS |
| TTCTTCTTGCATCATTTGCT+GGG | 0.381720 | 2_2:+62951935 | Msa0263510:CDS |
| TTTCTGCAGGTTGGGAAAAT+GGG | 0.382413 | 2_2:+62951396 | Msa0263510:intron |
| TTCTTCAAAACCGATTGTAT+AGG | 0.383134 | 2_2:+62952203 | Msa0263510:three_prime_UTR |
| TCCTGGTGAGGCCTTGCTCC+AGG | 0.386569 | 2_2:-62950566 | None:intergenic |
| GGCCCTACAAAAGAACTTTC+CGG | 0.389827 | 2_2:-62949314 | None:intergenic |
| AAGAGAAATGAAAATTGCTT+TGG | 0.391415 | 2_2:-62951421 | None:intergenic |
| CGCTATGACATCTACAACCA+TGG | 0.394503 | 2_2:+62951473 | Msa0263510:CDS |
| AGTCCGGGGTGAGTGGAAAA+AGG | 0.395216 | 2_2:+62948495 | Msa0263510:five_prime_UTR |
| GTAAACACTGAGTTTGCTTT+TGG | 0.400239 | 2_2:+62949437 | Msa0263510:CDS |
| CATGAGAAGCCTTCAATCTC+AGG | 0.401091 | 2_2:+62949338 | Msa0263510:CDS |
| ACACGTCCAATTTCTTCAAC+AGG | 0.403721 | 2_2:-62949416 | None:intergenic |
| GTTGTCTATTACTGCTAGAA+TGG | 0.409010 | 2_2:+62952430 | Msa0263510:three_prime_UTR |
| CGTGCCTGAAGTCATCTTCC+TGG | 0.419172 | 2_2:-62950583 | None:intergenic |
| TGAAATTAACAGGGTTTGGC+AGG | 0.424843 | 2_2:+62951247 | Msa0263510:intron |
| TTTGCAGTTGCACTGTGGTT+TGG | 0.425522 | 2_2:-62952125 | None:intergenic |
| AAGTAAAGTACCTTGTGAAC+TGG | 0.426819 | 2_2:-62948818 | None:intergenic |
| ACTTCCACAGCAAAGGATAC+TGG | 0.430854 | 2_2:+62950114 | Msa0263510:CDS |
| AGATTGATATTATTATCAAT+TGG | 0.432243 | 2_2:-62949176 | None:intergenic |
| TACTGTAAAAGCAAAGAGTC+CGG | 0.438500 | 2_2:+62948479 | None:intergenic |
| TCTTTCACTTCCTTTGCACC+CGG | 0.444418 | 2_2:-62950081 | None:intergenic |
| ACCAAGAATGTGCAATTAAG+TGG | 0.444610 | 2_2:+62950444 | Msa0263510:CDS |
| CGTGTTATTCCTTCCACCCC+GGG | 0.447122 | 2_2:+62950063 | Msa0263510:CDS |
| TTGCAAAGGTGAACTTGCCT+TGG | 0.449312 | 2_2:+62950418 | Msa0263510:CDS |
| ACATTGTGCTTGCTGCAATA+GGG | 0.450594 | 2_2:+62952273 | Msa0263510:three_prime_UTR |
| CTTTCACTTCCTTTGCACCC+GGG | 0.457658 | 2_2:-62950080 | None:intergenic |
| GACACTGATCCTGAGATTGA+AGG | 0.464802 | 2_2:-62949347 | None:intergenic |
| AGGAGGTGAGACATTGAAGA+TGG | 0.468154 | 2_2:+62950388 | Msa0263510:CDS |
| GCAGCAAGCACAATGTACTA+TGG | 0.473687 | 2_2:-62952266 | None:intergenic |
| GATTCTGAGTTCGAGCACTT+TGG | 0.480832 | 2_2:-62950544 | None:intergenic |
| AGTTTAATCGCCTATACAAT+CGG | 0.481535 | 2_2:-62952213 | None:intergenic |
| CTCACCAGGAAGATGACTTC+AGG | 0.483540 | 2_2:+62950579 | Msa0263510:CDS |
| AGTGCTCGAACTCAGAATCC+TGG | 0.485651 | 2_2:+62950548 | Msa0263510:CDS |
| TCCTTTGCACCCGGGGTGGA+AGG | 0.490851 | 2_2:-62950072 | None:intergenic |
| TCCTTCCACCCCGGGTGCAA+AGG | 0.498465 | 2_2:+62950071 | Msa0263510:CDS |
| ACCTTCCTGTCACTCTCTTA+CGG | 0.503603 | 2_2:+62950519 | Msa0263510:CDS |
| TTCATCATCGGATATTGAAA+AGG | 0.507280 | 2_2:+62949277 | Msa0263510:CDS |
| TCCTGGAGCAAGGCCTCACC+AGG | 0.512473 | 2_2:+62950565 | Msa0263510:CDS |
| CCGTGTTATTCCTTCCACCC+CGG | 0.512766 | 2_2:+62950062 | Msa0263510:CDS |
| TGATTGGGAAGACTTGATTG+TGG | 0.514541 | 2_2:-62952099 | None:intergenic |
| ACTGTGGTTTGGTTGTGATT+GGG | 0.516809 | 2_2:-62952114 | None:intergenic |
| TTTACTCGTTCAGAAAATGA+TGG | 0.517505 | 2_2:+62950299 | Msa0263510:intron |
| TTTCACTTCCTTTGCACCCG+GGG | 0.520277 | 2_2:-62950079 | None:intergenic |
| CGGTGAAGATATAGCTGAAG+AGG | 0.520641 | 2_2:+62950328 | Msa0263510:CDS |
| TGCTTGCTTCTTGTGTTGTG+TGG | 0.521414 | 2_2:-62948688 | None:intergenic |
| CTCCTCCTTGCACACATCAC+AGG | 0.524660 | 2_2:-62950489 | None:intergenic |
| TGGATCCGTAAGAGAGTGAC+AGG | 0.526179 | 2_2:-62950524 | None:intergenic |
| TGCACATTCTTGGTGAGCCA+AGG | 0.533062 | 2_2:-62950435 | None:intergenic |
| CATTTATGAAACAGGGTATG+TGG | 0.533959 | 2_2:-62948555 | None:intergenic |
| CACTTCCTTTGCACCCGGGG+TGG | 0.540335 | 2_2:-62950076 | None:intergenic |
| ACTGTAAAAGCAAAGAGTCC+GGG | 0.540967 | 2_2:+62948480 | None:intergenic |
| GATTGGGAAGACTTGATTGT+GGG | 0.541818 | 2_2:-62952098 | None:intergenic |
| GAGTTCGAGCTATCGTCCCC+TGG | 0.542518 | 2_2:-62949984 | None:intergenic |
| ATGCTGACAATGACAAGCAC+AGG | 0.545339 | 2_2:-62951275 | None:intergenic |
| GTCCACCTTCAACACAAAAG+AGG | 0.548163 | 2_2:+62949117 | Msa0263510:CDS |
| AGCAAAGAGTCCGGGGTGAG+TGG | 0.551715 | 2_2:+62948488 | Msa0263510:five_prime_UTR |
| TTATTGCGGAGGTACTCAAA+TGG | 0.552599 | 2_2:+62951986 | Msa0263510:CDS |
| ATGAAACAGGGTATGTGGAA+TGG | 0.559073 | 2_2:-62948550 | None:intergenic |
| CAAATGGAGAAGAAGATGGC+TGG | 0.559696 | 2_2:+62952002 | Msa0263510:CDS |
| CTGAAGTCATCTTCCTGGTG+AGG | 0.563583 | 2_2:-62950578 | None:intergenic |
| TCTCAAGTGACGACACAAGA+AGG | 0.563821 | 2_2:+62952051 | Msa0263510:CDS |
| AAAAGGAAATACAAGTAGGT+GGG | 0.571829 | 2_2:+62948512 | Msa0263510:five_prime_UTR |
| ATTAAGTGGTTTAGTATCAG+AGG | 0.572247 | 2_2:+62950458 | Msa0263510:CDS |
| GTGCAAAGGAAGTGAAAGAA+TGG | 0.581962 | 2_2:+62950085 | Msa0263510:CDS |
| CTGTGATGTGTGCAAGGAGG+AGG | 0.583666 | 2_2:+62950490 | Msa0263510:CDS |
| GATTCTTCTGATGACTTGCA+GGG | 0.583765 | 2_2:-62949041 | None:intergenic |
| TACTCAAATGGAGAAGAAGA+TGG | 0.584177 | 2_2:+62951998 | Msa0263510:CDS |
| GAGATTGAAGGCTTCTCATG+AGG | 0.592520 | 2_2:-62949335 | None:intergenic |
| TGCTGCAATAGGGAACAACT+TGG | 0.593135 | 2_2:+62952283 | Msa0263510:three_prime_UTR |
| TTCTTACTAAAAGCTGCTCG+AGG | 0.595865 | 2_2:-62951316 | None:intergenic |
| TCCACCTTCAACACAAAAGA+GGG | 0.596859 | 2_2:+62949118 | Msa0263510:CDS |
| AAAGGCGGTAATTGGAGCGC+CGG | 0.597556 | 2_2:+62949295 | Msa0263510:CDS |
| TTTGGTTAGAACTCATATTG+TGG | 0.599197 | 2_2:-62948748 | None:intergenic |
| CAAGACCTGTGATGTGTGCA+AGG | 0.600652 | 2_2:+62950484 | Msa0263510:CDS |
| GAGCGGAAGTTCAGTTATTG+CGG | 0.601376 | 2_2:+62951972 | Msa0263510:CDS |
| GTATAATAGGACTTCATCAT+CGG | 0.611914 | 2_2:+62949265 | Msa0263510:CDS |
| ACTTTCTCTTCCAGTTCACA+AGG | 0.611939 | 2_2:+62948808 | Msa0263510:CDS |
| AGTTGAGCATTTATGAAACA+GGG | 0.614551 | 2_2:-62948562 | None:intergenic |
| CTGTAAAAGCAAAGAGTCCG+GGG | 0.616846 | 2_2:+62948481 | None:intergenic |
| GATACCAGTATCCTTTGCTG+TGG | 0.623628 | 2_2:-62950118 | None:intergenic |
| GAACTCAGAATCCTGGAGCA+AGG | 0.624217 | 2_2:+62950555 | Msa0263510:CDS |
| ATCATCGGATATTGAAAAGG+CGG | 0.624923 | 2_2:+62949280 | Msa0263510:CDS |
| CGGAAGTTCAGTTATTGCGG+AGG | 0.627055 | 2_2:+62951975 | Msa0263510:CDS |
| GCTATGACATCTACAACCAT+GGG | 0.637028 | 2_2:+62951474 | Msa0263510:CDS |
| TCCGTAAGAGAGTGACAGGA+AGG | 0.644347 | 2_2:-62950520 | None:intergenic |
| CAAGAAGGACTATATCCTCA+AGG | 0.645178 | 2_2:+62952066 | Msa0263510:CDS |
| TCAGAAAATGATGGTGATGA+CGG | 0.645217 | 2_2:+62950308 | Msa0263510:intron |
| GCTGCAATAGGGAACAACTT+GGG | 0.645747 | 2_2:+62952284 | Msa0263510:three_prime_UTR |
| ATTGGGAAGACTTGATTGTG+GGG | 0.647865 | 2_2:-62952097 | None:intergenic |
| TGTGGGGTAATTACACCTTG+AGG | 0.662322 | 2_2:-62952081 | None:intergenic |
| AAGATGGAATGCTGTTGCAA+AGG | 0.669332 | 2_2:+62950404 | Msa0263510:CDS |
| CTGATTGAGCTATGTGAAGG+AGG | 0.675108 | 2_2:+62950371 | Msa0263510:CDS |
| TGTCTGATTGAGCTATGTGA+AGG | 0.685304 | 2_2:+62950368 | Msa0263510:CDS |
| GGAGACTAGACCGAGTACAC+AGG | 0.689360 | 2_2:-62951451 | None:intergenic |
| CCGGGGTGGAAGGAATAACA+CGG | 0.699439 | 2_2:-62950062 | None:intergenic |
| GGGTTTGGTGTAATGATGAG+CGG | 0.706372 | 2_2:+62951955 | Msa0263510:CDS |
| CTAGCAGTAATAGACAACAA+AGG | 0.710802 | 2_2:-62952425 | None:intergenic |
| CATGGTTGTAGATGTCATAG+CGG | 0.747961 | 2_2:-62951472 | None:intergenic |
| GACCTGTGATGTGTGCAAGG+AGG | 0.795153 | 2_2:+62950487 | Msa0263510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTATAATTTAATCTAAT+AGG | + | chr2_2:62948930-62948949 | Msa0263510:intron | 10.0% |
| !! | AAGAAAATGCTAATTAAATT+AGG | - | chr2_2:62948611-62948630 | None:intergenic | 15.0% |
| !! | ATAAATATTGTAACATAACA+TGG | - | chr2_2:62948863-62948882 | None:intergenic | 15.0% |
| !!! | ATTTTCATATGTTGATAATT+TGG | + | chr2_2:62948994-62949013 | Msa0263510:intron | 15.0% |
| !! | AGATTGATATTATTATCAAT+TGG | - | chr2_2:62949179-62949198 | None:intergenic | 15.0% |
| !!! | ATTGATAATAATATCAATCT+TGG | + | chr2_2:62949179-62949198 | Msa0263510:CDS | 15.0% |
| !! | TATTTAATCCTAAGATTAAT+AGG | + | chr2_2:62949381-62949400 | Msa0263510:CDS | 15.0% |
| !!! | TTTTATGTGCAATTAATTAA+TGG | + | chr2_2:62949537-62949556 | Msa0263510:intron | 15.0% |
| !! | TTTATGTGCAATTAATTAAT+GGG | + | chr2_2:62949538-62949557 | Msa0263510:intron | 15.0% |
| !!! | TATATTTTCATTAGTTAGTA+AGG | + | chr2_2:62949566-62949585 | Msa0263510:intron | 15.0% |
| !!! | TTATGAAATTATCTAGAATA+TGG | + | chr2_2:62950728-62950747 | Msa0263510:intron | 15.0% |
| !!! | TATGAAATTATCTAGAATAT+GGG | + | chr2_2:62950729-62950748 | Msa0263510:intron | 15.0% |
| !!! | TTCATGTTTCATTTTTATTT+TGG | + | chr2_2:62951631-62951650 | Msa0263510:intron | 15.0% |
| !! | ATCTAATAGGAGTTAATATA+AGG | + | chr2_2:62948943-62948962 | Msa0263510:intron | 20.0% |
| !! | TATAAGGTATAGTATTTATG+TGG | + | chr2_2:62948959-62948978 | Msa0263510:intron | 20.0% |
| !! | TACAAGTACTAATCAATTAA+AGG | - | chr2_2:62949494-62949513 | None:intergenic | 20.0% |
| !! | AATAAGCAGAAAACAATTTA+TGG | + | chr2_2:62949739-62949758 | Msa0263510:intron | 20.0% |
| !! | TCCTTTATATGTTCAAATTA+GGG | - | chr2_2:62949856-62949875 | None:intergenic | 20.0% |
| !! | ATCCTTTATATGTTCAAATT+AGG | - | chr2_2:62949857-62949876 | None:intergenic | 20.0% |
| !! | TCATTAAACAAAAAAATCAC+TGG | - | chr2_2:62949902-62949921 | None:intergenic | 20.0% |
| !! | GATTAAATTGGTTAAAACAA+AGG | - | chr2_2:62949950-62949969 | None:intergenic | 20.0% |
| !!! | TTTTCCTTGTAATTTTTTCT+TGG | - | chr2_2:62950029-62950048 | None:intergenic | 20.0% |
| !! | AGAAAAAATTACAAGGAAAA+TGG | + | chr2_2:62950029-62950048 | Msa0263510:CDS | 20.0% |
| !!! | ATGAAATTATCTAGAATATG+GGG | + | chr2_2:62950730-62950749 | Msa0263510:intron | 20.0% |
| !! | AGTATATTCATCATATTTCT+CGG | - | chr2_2:62951518-62951537 | None:intergenic | 20.0% |
| !! | GATATATAAATGAAACTAAG+AGG | - | chr2_2:62951551-62951570 | None:intergenic | 20.0% |
| !!! | TCTAAAATTGTGCATAAAAT+AGG | + | chr2_2:62951569-62951588 | Msa0263510:intron | 20.0% |
| !! | ATAACTTCATTCTATTAGTT+TGG | + | chr2_2:62951877-62951896 | Msa0263510:intron | 20.0% |
| !! | TTTTCATTTCACAACTCATA+AGG | + | chr2_2:62948644-62948663 | Msa0263510:five_prime_UTR | 25.0% |
| !!! | TCATATGTTGATAATTTGGA+AGG | + | chr2_2:62948998-62949017 | Msa0263510:intron | 25.0% |
| ! | TATTACCAAAACTGAATTTC+AGG | + | chr2_2:62949243-62949262 | Msa0263510:CDS | 25.0% |
| !! | TTATACCTGAAATTCAGTTT+TGG | - | chr2_2:62949251-62949270 | None:intergenic | 25.0% |
| !! | AACTGAATTTCAGGTATAAT+AGG | + | chr2_2:62949252-62949271 | Msa0263510:CDS | 25.0% |
| ! | ACCCTAATTTGAACATATAA+AGG | + | chr2_2:62949852-62949871 | Msa0263510:intron | 25.0% |
| ! | TTAACAGTTATATGTTGCTA+AGG | - | chr2_2:62949927-62949946 | None:intergenic | 25.0% |
| !!! | AATTTTTTCTTGGCTATCTA+CGG | - | chr2_2:62950019-62950038 | None:intergenic | 25.0% |
| ! | ATAGCCAAGAAAAAATTACA+AGG | + | chr2_2:62950022-62950041 | Msa0263510:CDS | 25.0% |
| ! | GCTATATGTTGAATGAATTA+TGG | + | chr2_2:62950635-62950654 | Msa0263510:intron | 25.0% |
| !! | TAACAAATAACTTGCAACTA+GGG | - | chr2_2:62950711-62950730 | None:intergenic | 25.0% |
| !! | ATAACAAATAACTTGCAACT+AGG | - | chr2_2:62950712-62950731 | None:intergenic | 25.0% |
| ! | TGCAGAAAGTTGAATAAATT+AGG | - | chr2_2:62951384-62951403 | None:intergenic | 25.0% |
| ! | TAATTTATTCAACTTTCTGC+AGG | + | chr2_2:62951383-62951402 | Msa0263510:intron | 25.0% |
| ! | AAGAGAAATGAAAATTGCTT+TGG | - | chr2_2:62951424-62951443 | None:intergenic | 25.0% |
| ! | TATATTCATCATATTTCTCG+GGG | - | chr2_2:62951516-62951535 | None:intergenic | 25.0% |
| ! | GTATATTCATCATATTTCTC+GGG | - | chr2_2:62951517-62951536 | None:intergenic | 25.0% |
| ! | ACTGAATTGAAGTCTATATA+TGG | + | chr2_2:62952170-62952189 | Msa0263510:exon | 25.0% |
| TGGAAAAAGGAAATACAAGT+AGG | + | chr2_2:62948508-62948527 | Msa0263510:five_prime_UTR | 30.0% | |
| AAAAAGGAAATACAAGTAGG+TGG | + | chr2_2:62948511-62948530 | Msa0263510:five_prime_UTR | 30.0% | |
| AAAAGGAAATACAAGTAGGT+GGG | + | chr2_2:62948512-62948531 | Msa0263510:five_prime_UTR | 30.0% | |
| AGTTGAGCATTTATGAAACA+GGG | - | chr2_2:62948565-62948584 | None:intergenic | 30.0% | |
| AAGTTGAGCATTTATGAAAC+AGG | - | chr2_2:62948566-62948585 | None:intergenic | 30.0% | |
| TTTGGTTAGAACTCATATTG+TGG | - | chr2_2:62948751-62948770 | None:intergenic | 30.0% | |
| !!! | GTTCATGATGATGTTGTTTT+TGG | - | chr2_2:62948769-62948788 | None:intergenic | 30.0% |
| ACATGGCTTAAAAAGTGAAA+AGG | - | chr2_2:62948846-62948865 | None:intergenic | 30.0% | |
| ! | TTGGAAGGAAAATCTTTTGA+TGG | + | chr2_2:62949013-62949032 | Msa0263510:intron | 30.0% |
| GTATAATAGGACTTCATCAT+CGG | + | chr2_2:62949265-62949284 | Msa0263510:CDS | 30.0% | |
| TTCATCATCGGATATTGAAA+AGG | + | chr2_2:62949277-62949296 | Msa0263510:CDS | 30.0% | |
| GATGAAGTCCTATTAATCTT+AGG | - | chr2_2:62949392-62949411 | None:intergenic | 30.0% | |
| TCATTACCTGTTGAAGAAAT+TGG | + | chr2_2:62949410-62949429 | Msa0263510:CDS | 30.0% | |
| TCAATTAAAGGCCTTACATA+AGG | - | chr2_2:62949482-62949501 | None:intergenic | 30.0% | |
| !! | TTAGTTAGTAAGGTCTTGTT+TGG | + | chr2_2:62949576-62949595 | Msa0263510:intron | 30.0% |
| !! | TAGTTAGTAAGGTCTTGTTT+GGG | + | chr2_2:62949577-62949596 | Msa0263510:intron | 30.0% |
| ATAAGCGCTTATCATATTAG+TGG | + | chr2_2:62949625-62949644 | Msa0263510:intron | 30.0% | |
| TTATAAGTGTTTATGCCAGT+AGG | + | chr2_2:62949802-62949821 | Msa0263510:intron | 30.0% | |
| ACTTATTTGAACTTACCTAC+TGG | - | chr2_2:62949820-62949839 | None:intergenic | 30.0% | |
| TCTCTGCAAAAGGATTAAAT+TGG | - | chr2_2:62949962-62949981 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTTGGCTATCTAC+GGG | - | chr2_2:62950018-62950037 | None:intergenic | 30.0% |
| ! | TTATTGACAGCATTTAGGAT+TGG | - | chr2_2:62950264-62950283 | None:intergenic | 30.0% |
| ! | ATCATTTTCTGAACGAGTAA+AGG | - | chr2_2:62950300-62950319 | None:intergenic | 30.0% |
| TTTACTCGTTCAGAAAATGA+TGG | + | chr2_2:62950299-62950318 | Msa0263510:intron | 30.0% | |
| ATTAAGTGGTTTAGTATCAG+AGG | + | chr2_2:62950458-62950477 | Msa0263510:CDS | 30.0% | |
| AATTTCAACTAGATATCGCA+CGG | - | chr2_2:62951039-62951058 | None:intergenic | 30.0% | |
| ! | TAAGCAATCAATGTTTTCCT+TGG | + | chr2_2:62951114-62951133 | Msa0263510:intron | 30.0% |
| GTAAAATAGTGCACTTGTAT+TGG | - | chr2_2:62951150-62951169 | None:intergenic | 30.0% | |
| ! | CAAGTGCACTATTTTACAAA+TGG | + | chr2_2:62951153-62951172 | Msa0263510:intron | 30.0% |
| AATTGTCTGCTGAAATTAAC+AGG | + | chr2_2:62951237-62951256 | Msa0263510:intron | 30.0% | |
| ATTGTCTGCTGAAATTAACA+GGG | + | chr2_2:62951238-62951257 | Msa0263510:intron | 30.0% | |
| ! | TTTTCTGTTCATGCTTGTTT+GGG | + | chr2_2:62951656-62951675 | Msa0263510:intron | 30.0% |
| ! | ACAATTAGGGTTTGCTTAAA+TGG | - | chr2_2:62951687-62951706 | None:intergenic | 30.0% |
| ACTGGAAAAGGAAACAATTA+GGG | - | chr2_2:62951700-62951719 | None:intergenic | 30.0% | |
| TATCATAGTCTATTACCAAG+GGG | - | chr2_2:62951795-62951814 | None:intergenic | 30.0% | |
| GTATCATAGTCTATTACCAA+GGG | - | chr2_2:62951796-62951815 | None:intergenic | 30.0% | |
| ATGAAGTTATTCTTCCTGTA+GGG | - | chr2_2:62951867-62951886 | None:intergenic | 30.0% | |
| AATGAAGTTATTCTTCCTGT+AGG | - | chr2_2:62951868-62951887 | None:intergenic | 30.0% | |
| !!! | ATCGGTTTTGAAGAAATGAA+AGG | - | chr2_2:62952198-62952217 | None:intergenic | 30.0% |
| TTCTTCAAAACCGATTGTAT+AGG | + | chr2_2:62952203-62952222 | Msa0263510:three_prime_UTR | 30.0% | |
| AGTTTAATCGCCTATACAAT+CGG | - | chr2_2:62952216-62952235 | None:intergenic | 30.0% | |
| CATTTATGAAACAGGGTATG+TGG | - | chr2_2:62948558-62948577 | None:intergenic | 35.0% | |
| !! | GTGGTGCATTTGTTTGTTTT+AGG | - | chr2_2:62948672-62948691 | None:intergenic | 35.0% |
| ! | AAGTAAAGTACCTTGTGAAC+TGG | - | chr2_2:62948821-62948840 | None:intergenic | 35.0% |
| ATCATCGGATATTGAAAAGG+CGG | + | chr2_2:62949280-62949299 | Msa0263510:CDS | 35.0% | |
| GATATTGAAAAGGCGGTAAT+TGG | + | chr2_2:62949287-62949306 | Msa0263510:CDS | 35.0% | |
| !! | GTAAACACTGAGTTTGCTTT+TGG | + | chr2_2:62949437-62949456 | Msa0263510:CDS | 35.0% |
| !! | AGTTGTTTTCATAAGCTTCC+TGG | + | chr2_2:62949713-62949732 | Msa0263510:intron | 35.0% |
| !! | TGTTTTCTGCTTATTTCTCC+AGG | - | chr2_2:62949734-62949753 | None:intergenic | 35.0% |
| ! | AGCTTGTTTGAGAGAACTTA+TGG | - | chr2_2:62949783-62949802 | None:intergenic | 35.0% |
| TGTTCAAATTAGGGTCTCTT+TGG | - | chr2_2:62949847-62949866 | None:intergenic | 35.0% | |
| GTTAAAAACTTCCACAGCAA+AGG | + | chr2_2:62950107-62950126 | Msa0263510:CDS | 35.0% | |
| AGAACTTGTATAAGCAATCG+CGG | + | chr2_2:62950149-62950168 | Msa0263510:intron | 35.0% | |
| TCGAGTTATTGACAGCATTT+AGG | - | chr2_2:62950269-62950288 | None:intergenic | 35.0% | |
| ! | TCAGAAAATGATGGTGATGA+CGG | + | chr2_2:62950308-62950327 | Msa0263510:intron | 35.0% |
| ACCAAGAATGTGCAATTAAG+TGG | + | chr2_2:62950444-62950463 | Msa0263510:CDS | 35.0% | |
| ACCACTTAATTGCACATTCT+TGG | - | chr2_2:62950448-62950467 | None:intergenic | 35.0% | |
| ! | ATAACTTGCAACTAGGGAAA+TGG | - | chr2_2:62950705-62950724 | None:intergenic | 35.0% |
| TTAGATGCATGACAGTATAC+GGG | - | chr2_2:62950764-62950783 | None:intergenic | 35.0% | |
| GTTAGATGCATGACAGTATA+CGG | - | chr2_2:62950765-62950784 | None:intergenic | 35.0% | |
| GCTATCTCTGAATTTATCAC+TGG | + | chr2_2:62950804-62950823 | Msa0263510:intron | 35.0% | |
| TAAACAGCGTATCGTCATAT+TGG | - | chr2_2:62950905-62950924 | None:intergenic | 35.0% | |
| CTTGTTTGCATTGAAGTTGT+AGG | + | chr2_2:62951007-62951026 | Msa0263510:intron | 35.0% | |
| TTATTCAACTTTCTGCAGGT+TGG | + | chr2_2:62951387-62951406 | Msa0263510:intron | 35.0% | |
| TATTCAACTTTCTGCAGGTT+GGG | + | chr2_2:62951388-62951407 | Msa0263510:intron | 35.0% | |
| ! | ATATTTTGCAAACCTACCCA+TGG | - | chr2_2:62951493-62951512 | None:intergenic | 35.0% |
| ! | GGTTCTTTCGCAAACATTTT+AGG | + | chr2_2:62951590-62951609 | Msa0263510:intron | 35.0% |
| CAAACAAGCATGAACAGAAA+AGG | - | chr2_2:62951657-62951676 | None:intergenic | 35.0% | |
| ! | CTTTTCTGTTCATGCTTGTT+TGG | + | chr2_2:62951655-62951674 | Msa0263510:intron | 35.0% |
| CACTGGAAAAGGAAACAATT+AGG | - | chr2_2:62951701-62951720 | None:intergenic | 35.0% | |
| ! | AATTGTTTCCTTTTCCAGTG+AGG | + | chr2_2:62951701-62951720 | Msa0263510:intron | 35.0% |
| CGTATCATAGTCTATTACCA+AGG | - | chr2_2:62951797-62951816 | None:intergenic | 35.0% | |
| TGAAGTTATTCTTCCTGTAG+GGG | - | chr2_2:62951866-62951885 | None:intergenic | 35.0% | |
| ATTCTTCTTGCATCATTTGC+TGG | + | chr2_2:62951934-62951953 | Msa0263510:CDS | 35.0% | |
| TTCTTCTTGCATCATTTGCT+GGG | + | chr2_2:62951935-62951954 | Msa0263510:CDS | 35.0% | |
| TACTCAAATGGAGAAGAAGA+TGG | + | chr2_2:62951998-62952017 | Msa0263510:CDS | 35.0% | |
| ! | GCAGAATTTTACTACTTTGC+AGG | + | chr2_2:62952239-62952258 | Msa0263510:three_prime_UTR | 35.0% |
| CTAGCAGTAATAGACAACAA+AGG | - | chr2_2:62952428-62952447 | None:intergenic | 35.0% | |
| GTTGTCTATTACTGCTAGAA+TGG | + | chr2_2:62952430-62952449 | Msa0263510:three_prime_UTR | 35.0% | |
| ATGAAACAGGGTATGTGGAA+TGG | - | chr2_2:62948553-62948572 | None:intergenic | 40.0% | |
| ACTTTCTCTTCCAGTTCACA+AGG | + | chr2_2:62948808-62948827 | Msa0263510:CDS | 40.0% | |
| ! | GATTCTTCTGATGACTTGCA+GGG | - | chr2_2:62949044-62949063 | None:intergenic | 40.0% |
| ! | AGATTCTTCTGATGACTTGC+AGG | - | chr2_2:62949045-62949064 | None:intergenic | 40.0% |
| !! | TTTTGTGTTGAAGGTGGACT+TGG | - | chr2_2:62949116-62949135 | None:intergenic | 40.0% |
| TCCACCTTCAACACAAAAGA+GGG | + | chr2_2:62949118-62949137 | Msa0263510:CDS | 40.0% | |
| ! | TTCACCCTCTTTTGTGTTGA+AGG | - | chr2_2:62949125-62949144 | None:intergenic | 40.0% |
| ACACGTCCAATTTCTTCAAC+AGG | - | chr2_2:62949419-62949438 | None:intergenic | 40.0% | |
| !! | AACACTGAGTTTGCTTTTGG+TGG | + | chr2_2:62949440-62949459 | Msa0263510:CDS | 40.0% |
| !! | TTTGCTTTTGGTGGATGTCT+TGG | + | chr2_2:62949449-62949468 | Msa0263510:CDS | 40.0% |
| ! | TTGGTGCTTCTCCTTATGTA+AGG | + | chr2_2:62949468-62949487 | Msa0263510:intron | 40.0% |
| GTGCAAAGGAAGTGAAAGAA+TGG | + | chr2_2:62950085-62950104 | Msa0263510:CDS | 40.0% | |
| TGTCTGATTGAGCTATGTGA+AGG | + | chr2_2:62950368-62950387 | Msa0263510:CDS | 40.0% | |
| AAGATGGAATGCTGTTGCAA+AGG | + | chr2_2:62950404-62950423 | Msa0263510:CDS | 40.0% | |
| !! | ATGACAGTATACGGGTTGAT+TGG | - | chr2_2:62950756-62950775 | None:intergenic | 40.0% |
| !!! | TATCACTGGTTTTGCACATC+CGG | + | chr2_2:62950818-62950837 | Msa0263510:intron | 40.0% |
| GACTACTTGAAGCATGAAAG+TGG | - | chr2_2:62951069-62951088 | None:intergenic | 40.0% | |
| ! | ATGTTTTCCTTGGAGTTCTG+TGG | + | chr2_2:62951124-62951143 | Msa0263510:intron | 40.0% |
| CTGCTGAAATTAACAGGGTT+TGG | + | chr2_2:62951243-62951262 | Msa0263510:intron | 40.0% | |
| TGAAATTAACAGGGTTTGGC+AGG | + | chr2_2:62951247-62951266 | Msa0263510:intron | 40.0% | |
| TTCTTACTAAAAGCTGCTCG+AGG | - | chr2_2:62951319-62951338 | None:intergenic | 40.0% | |
| ! | TTTCTGCAGGTTGGGAAAAT+GGG | + | chr2_2:62951396-62951415 | Msa0263510:intron | 40.0% |
| ! | CTTCCATTTTCCTGTGTACT+CGG | + | chr2_2:62951441-62951460 | Msa0263510:CDS | 40.0% |
| CATGGTTGTAGATGTCATAG+CGG | - | chr2_2:62951475-62951494 | None:intergenic | 40.0% | |
| GCTATGACATCTACAACCAT+GGG | + | chr2_2:62951474-62951493 | Msa0263510:CDS | 40.0% | |
| ! | TGCATCTGCTCAGTTTCTTT+TGG | + | chr2_2:62951744-62951763 | Msa0263510:CDS | 40.0% |
| ! | ATCTGCTCAGTTTCTTTTGG+TGG | + | chr2_2:62951747-62951766 | Msa0263510:CDS | 40.0% |
| TTATTCTTCCTGTAGGGGTT+TGG | - | chr2_2:62951861-62951880 | None:intergenic | 40.0% | |
| ! | CTATTAGTTTGGAAACCTGC+AGG | + | chr2_2:62951888-62951907 | Msa0263510:intron | 40.0% |
| !! | TTATTGCGGAGGTACTCAAA+TGG | + | chr2_2:62951986-62952005 | Msa0263510:CDS | 40.0% |
| CAAGAAGGACTATATCCTCA+AGG | + | chr2_2:62952066-62952085 | Msa0263510:CDS | 40.0% | |
| ATTGGGAAGACTTGATTGTG+GGG | - | chr2_2:62952100-62952119 | None:intergenic | 40.0% | |
| GATTGGGAAGACTTGATTGT+GGG | - | chr2_2:62952101-62952120 | None:intergenic | 40.0% | |
| TGATTGGGAAGACTTGATTG+TGG | - | chr2_2:62952102-62952121 | None:intergenic | 40.0% | |
| !! | ACTGTGGTTTGGTTGTGATT+GGG | - | chr2_2:62952117-62952136 | None:intergenic | 40.0% |
| ! | TTGATTTTGCAGTTGCACTG+TGG | - | chr2_2:62952133-62952152 | None:intergenic | 40.0% |
| ! | TACATTGTGCTTGCTGCAAT+AGG | + | chr2_2:62952272-62952291 | Msa0263510:three_prime_UTR | 40.0% |
| ! | ACATTGTGCTTGCTGCAATA+GGG | + | chr2_2:62952273-62952292 | Msa0263510:three_prime_UTR | 40.0% |
| CTTGGGACAATAGGTTTCTA+TGG | + | chr2_2:62952301-62952320 | Msa0263510:three_prime_UTR | 40.0% | |
| ! | TTTCCTTTTTCCACTCACCC+CGG | - | chr2_2:62948501-62948520 | None:intergenic | 45.0% |
| TGCTTGCTTCTTGTGTTGTG+TGG | - | chr2_2:62948691-62948710 | None:intergenic | 45.0% | |
| !! | GAAGGTGGACTTGGTGTTAA+TGG | - | chr2_2:62949107-62949126 | None:intergenic | 45.0% |
| GTCCACCTTCAACACAAAAG+AGG | + | chr2_2:62949117-62949136 | Msa0263510:CDS | 45.0% | |
| ! | ACCCTCTTTTGTGTTGAAGG+TGG | - | chr2_2:62949122-62949141 | None:intergenic | 45.0% |
| ! | CGCCGGAAAGTTCTTTTGTA+GGG | + | chr2_2:62949312-62949331 | Msa0263510:CDS | 45.0% |
| GGCCCTACAAAAGAACTTTC+CGG | - | chr2_2:62949317-62949336 | None:intergenic | 45.0% | |
| GAGATTGAAGGCTTCTCATG+AGG | - | chr2_2:62949338-62949357 | None:intergenic | 45.0% | |
| CATGAGAAGCCTTCAATCTC+AGG | + | chr2_2:62949338-62949357 | Msa0263510:CDS | 45.0% | |
| GACACTGATCCTGAGATTGA+AGG | - | chr2_2:62949350-62949369 | None:intergenic | 45.0% | |
| ! | AATCCTTTTGCAGAGAAGCC+AGG | + | chr2_2:62949966-62949985 | Msa0263510:intron | 45.0% |
| ! | ATCCTTTTGCAGAGAAGCCA+GGG | + | chr2_2:62949967-62949986 | Msa0263510:intron | 45.0% |
| TCTTTCACTTCCTTTGCACC+CGG | - | chr2_2:62950084-62950103 | None:intergenic | 45.0% | |
| ACTTCCACAGCAAAGGATAC+TGG | + | chr2_2:62950114-62950133 | Msa0263510:CDS | 45.0% | |
| GATACCAGTATCCTTTGCTG+TGG | - | chr2_2:62950121-62950140 | None:intergenic | 45.0% | |
| CGGTGAAGATATAGCTGAAG+AGG | + | chr2_2:62950328-62950347 | Msa0263510:CDS | 45.0% | |
| CTGATTGAGCTATGTGAAGG+AGG | + | chr2_2:62950371-62950390 | Msa0263510:CDS | 45.0% | |
| AGGAGGTGAGACATTGAAGA+TGG | + | chr2_2:62950388-62950407 | Msa0263510:CDS | 45.0% | |
| TTGCAAAGGTGAACTTGCCT+TGG | + | chr2_2:62950418-62950437 | Msa0263510:CDS | 45.0% | |
| ACCTTCCTGTCACTCTCTTA+CGG | + | chr2_2:62950519-62950538 | Msa0263510:CDS | 45.0% | |
| GATTCTGAGTTCGAGCACTT+TGG | - | chr2_2:62950547-62950566 | None:intergenic | 45.0% | |
| CAGCTATCTAACAACACTGC+CGG | - | chr2_2:62950840-62950859 | None:intergenic | 45.0% | |
| ATGCTGACAATGACAAGCAC+AGG | - | chr2_2:62951278-62951297 | None:intergenic | 45.0% | |
| ! | CTTTCTGCAGGTTGGGAAAA+TGG | + | chr2_2:62951395-62951414 | Msa0263510:intron | 45.0% |
| AGACCGAGTACACAGGAAAA+TGG | - | chr2_2:62951447-62951466 | None:intergenic | 45.0% | |
| CGCTATGACATCTACAACCA+TGG | + | chr2_2:62951473-62951492 | Msa0263510:CDS | 45.0% | |
| TGACATCTACAACCATGGGT+AGG | + | chr2_2:62951478-62951497 | Msa0263510:intron | 45.0% | |
| ! | AACTTGCTCCTCACTGGAAA+AGG | - | chr2_2:62951712-62951731 | None:intergenic | 45.0% |
| TAGTTTGGAAACCTGCAGGT+TGG | + | chr2_2:62951892-62951911 | Msa0263510:intron | 45.0% | |
| !!! | GGTTGGTAAGCAAGCAGTTT+TGG | + | chr2_2:62951909-62951928 | Msa0263510:intron | 45.0% |
| ! | CTTGCATCATTTGCTGGGTT+TGG | + | chr2_2:62951940-62951959 | Msa0263510:CDS | 45.0% |
| !! | GGGTTTGGTGTAATGATGAG+CGG | + | chr2_2:62951955-62951974 | Msa0263510:CDS | 45.0% |
| GAGCGGAAGTTCAGTTATTG+CGG | + | chr2_2:62951972-62951991 | Msa0263510:CDS | 45.0% | |
| CAAATGGAGAAGAAGATGGC+TGG | + | chr2_2:62952002-62952021 | Msa0263510:CDS | 45.0% | |
| TCTCAAGTGACGACACAAGA+AGG | + | chr2_2:62952051-62952070 | Msa0263510:CDS | 45.0% | |
| TGTGGGGTAATTACACCTTG+AGG | - | chr2_2:62952084-62952103 | None:intergenic | 45.0% | |
| !! | CACTGTGGTTTGGTTGTGAT+TGG | - | chr2_2:62952118-62952137 | None:intergenic | 45.0% |
| TTTGCAGTTGCACTGTGGTT+TGG | - | chr2_2:62952128-62952147 | None:intergenic | 45.0% | |
| GCAGCAAGCACAATGTACTA+TGG | - | chr2_2:62952269-62952288 | None:intergenic | 45.0% | |
| TGCTGCAATAGGGAACAACT+TGG | + | chr2_2:62952283-62952302 | Msa0263510:three_prime_UTR | 45.0% | |
| GCTGCAATAGGGAACAACTT+GGG | + | chr2_2:62952284-62952303 | Msa0263510:three_prime_UTR | 45.0% | |
| AGGGAACAACTTGGGACAAT+AGG | + | chr2_2:62952292-62952311 | Msa0263510:three_prime_UTR | 45.0% | |
| ! | GCGCCGGAAAGTTCTTTTGT+AGG | + | chr2_2:62949311-62949330 | Msa0263510:CDS | 50.0% |
| ! | TCCTTTTGCAGAGAAGCCAG+GGG | + | chr2_2:62949968-62949987 | Msa0263510:intron | 50.0% |
| TTTCACTTCCTTTGCACCCG+GGG | - | chr2_2:62950082-62950101 | None:intergenic | 50.0% | |
| CTTTCACTTCCTTTGCACCC+GGG | - | chr2_2:62950083-62950102 | None:intergenic | 50.0% | |
| TGCACATTCTTGGTGAGCCA+AGG | - | chr2_2:62950438-62950457 | None:intergenic | 50.0% | |
| CAAGACCTGTGATGTGTGCA+AGG | + | chr2_2:62950484-62950503 | Msa0263510:CDS | 50.0% | |
| TCCGTAAGAGAGTGACAGGA+AGG | - | chr2_2:62950523-62950542 | None:intergenic | 50.0% | |
| TGGATCCGTAAGAGAGTGAC+AGG | - | chr2_2:62950527-62950546 | None:intergenic | 50.0% | |
| AGTGCTCGAACTCAGAATCC+TGG | + | chr2_2:62950548-62950567 | Msa0263510:CDS | 50.0% | |
| GAACTCAGAATCCTGGAGCA+AGG | + | chr2_2:62950555-62950574 | Msa0263510:CDS | 50.0% | |
| CTGAAGTCATCTTCCTGGTG+AGG | - | chr2_2:62950581-62950600 | None:intergenic | 50.0% | |
| CTCACCAGGAAGATGACTTC+AGG | + | chr2_2:62950579-62950598 | Msa0263510:CDS | 50.0% | |
| ! | GTATTGGCCACAGAACTCCA+AGG | - | chr2_2:62951134-62951153 | None:intergenic | 50.0% |
| ! | CAGATGAACTTGCTCCTCAC+TGG | - | chr2_2:62951718-62951737 | None:intergenic | 50.0% |
| CAGTGAGGAGCAAGTTCATC+TGG | + | chr2_2:62951716-62951735 | Msa0263510:intron | 50.0% | |
| GACATGTACCAAACCCCTAC+AGG | + | chr2_2:62951850-62951869 | Msa0263510:intron | 50.0% | |
| CGGAAGTTCAGTTATTGCGG+AGG | + | chr2_2:62951975-62951994 | Msa0263510:CDS | 50.0% | |
| AGTCCGGGGTGAGTGGAAAA+AGG | + | chr2_2:62948495-62948514 | Msa0263510:five_prime_UTR | 55.0% | |
| AAAGGCGGTAATTGGAGCGC+CGG | + | chr2_2:62949295-62949314 | Msa0263510:CDS | 55.0% | |
| TCCCCTGGCTTCTCTGCAAA+AGG | - | chr2_2:62949972-62949991 | None:intergenic | 55.0% | |
| CCGGGGTGGAAGGAATAACA+CGG | - | chr2_2:62950065-62950084 | None:intergenic | 55.0% | |
| ! | CCGTGTTATTCCTTCCACCC+CGG | + | chr2_2:62950062-62950081 | Msa0263510:CDS | 55.0% |
| ! | CGTGTTATTCCTTCCACCCC+GGG | + | chr2_2:62950063-62950082 | Msa0263510:CDS | 55.0% |
| GACCTGTGATGTGTGCAAGG+AGG | + | chr2_2:62950487-62950506 | Msa0263510:CDS | 55.0% | |
| CTCCTCCTTGCACACATCAC+AGG | - | chr2_2:62950492-62950511 | None:intergenic | 55.0% | |
| CTGTGATGTGTGCAAGGAGG+AGG | + | chr2_2:62950490-62950509 | Msa0263510:CDS | 55.0% | |
| CGTGCCTGAAGTCATCTTCC+TGG | - | chr2_2:62950586-62950605 | None:intergenic | 55.0% | |
| GGAGACTAGACCGAGTACAC+AGG | - | chr2_2:62951454-62951473 | None:intergenic | 55.0% | |
| ! | CGCGCACGTATTTTACCCCT+TGG | + | chr2_2:62951777-62951796 | Msa0263510:CDS | 55.0% |
| CTGCTTGCTTACCAACCTGC+AGG | - | chr2_2:62951906-62951925 | None:intergenic | 55.0% | |
| AGCAAAGAGTCCGGGGTGAG+TGG | + | chr2_2:62948488-62948507 | Msa0263510:five_prime_UTR | 60.0% | |
| GAGTTCGAGCTATCGTCCCC+TGG | - | chr2_2:62949987-62950006 | None:intergenic | 60.0% | |
| TCCTTCCACCCCGGGTGCAA+AGG | + | chr2_2:62950071-62950090 | Msa0263510:CDS | 65.0% | |
| TCCTTTGCACCCGGGGTGGA+AGG | - | chr2_2:62950075-62950094 | None:intergenic | 65.0% | |
| CACTTCCTTTGCACCCGGGG+TGG | - | chr2_2:62950079-62950098 | None:intergenic | 65.0% | |
| TCCTGGAGCAAGGCCTCACC+AGG | + | chr2_2:62950565-62950584 | Msa0263510:CDS | 65.0% | |
| TCCTGGTGAGGCCTTGCTCC+AGG | - | chr2_2:62950569-62950588 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 62948483 | 62952512 | 62948483 | ID=Msa0263510;Name=Msa0263510 |
| chr2_2 | mRNA | 62948483 | 62952512 | 62948483 | ID=Msa0263510-mRNA-1;Parent=Msa0263510;Name=Msa0263510-mRNA-1;_AED=0.12;_eAED=0.12;_QI=272|0.85|0.87|1|1|1|8|342|499 |
| chr2_2 | exon | 62948483 | 62948829 | 62948483 | ID=Msa0263510-mRNA-1:exon:19507;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62949020 | 62949484 | 62949020 | ID=Msa0263510-mRNA-1:exon:19508;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62949979 | 62950135 | 62949979 | ID=Msa0263510-mRNA-1:exon:19509;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62950312 | 62950609 | 62950312 | ID=Msa0263510-mRNA-1:exon:19510;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62951259 | 62951331 | 62951259 | ID=Msa0263510-mRNA-1:exon:19511;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62951405 | 62951495 | 62951405 | ID=Msa0263510-mRNA-1:exon:19512;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62951719 | 62951798 | 62951719 | ID=Msa0263510-mRNA-1:exon:19513;Parent=Msa0263510-mRNA-1 |
| chr2_2 | exon | 62951910 | 62952512 | 62951910 | ID=Msa0263510-mRNA-1:exon:19514;Parent=Msa0263510-mRNA-1 |
| chr2_2 | five_prime_UTR | 62948483 | 62948754 | 62948483 | ID=Msa0263510-mRNA-1:five_prime_utr;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62948755 | 62948829 | 62948755 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62949020 | 62949484 | 62949020 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62949979 | 62950135 | 62949979 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62950312 | 62950609 | 62950312 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62951259 | 62951331 | 62951259 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62951405 | 62951495 | 62951405 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62951719 | 62951798 | 62951719 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | CDS | 62951910 | 62952170 | 62951910 | ID=Msa0263510-mRNA-1:cds;Parent=Msa0263510-mRNA-1 |
| chr2_2 | three_prime_UTR | 62952171 | 62952512 | 62952171 | ID=Msa0263510-mRNA-1:three_prime_utr;Parent=Msa0263510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
