Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498080 | XP_013459605.1 | 98.571 | 490 | 7 | 0 | 1 | 490 | 1 | 490 | 0.0 | 994 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498080 | sp|Q9SKX5|PAO2_ARATH | 77.959 | 490 | 108 | 0 | 1 | 490 | 1 | 490 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498080 | A0A072UW35 | 98.571 | 490 | 7 | 0 | 1 | 490 | 1 | 490 | 0.0 | 994 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0375270 | Msa0498080 | 0.815498 | 8.962954e-52 | -8.615850e-47 |
| Msa0404850 | Msa0498080 | 0.965037 | 4.343591e-124 | -8.615850e-47 |
| Msa0415910 | Msa0498080 | 0.831155 | 1.959724e-55 | -8.615850e-47 |
| Msa0450840 | Msa0498080 | 0.978657 | 2.753010e-146 | -8.615850e-47 |
| Msa0263510 | Msa0498080 | 0.821715 | 3.483697e-53 | -8.615850e-47 |
| Msa0338660 | Msa0498080 | 0.818764 | 1.652903e-52 | -8.615850e-47 |
| Msa0496470 | Msa0498080 | 0.808589 | 2.875549e-50 | -8.615850e-47 |
| Msa0498080 | Msa0508000 | 0.816139 | 6.449029e-52 | -8.615850e-47 |
| Msa0498080 | Msa0664110 | 0.803502 | 3.381035e-49 | -8.615850e-47 |
| Msa0498080 | Msa1029190 | 0.807694 | 4.460285e-50 | -8.615850e-47 |
| Msa0498080 | Msa1203210 | 0.828098 | 1.085918e-54 | -8.615850e-47 |
| Msa0498080 | Msa1221370 | 0.814253 | 1.692909e-51 | -8.615850e-47 |
| Msa0498080 | Msa1405190 | 0.805115 | 1.559589e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498080 | MtrunA17_Chr3g0095231 | 98.571 | 490 | 7 | 0 | 1 | 490 | 1 | 490 | 0.0 | 994 |
| Msa0498080 | MtrunA17_Chr5g0442341 | 82.857 | 490 | 82 | 1 | 1 | 490 | 1 | 488 | 0.0 | 816 |
| Msa0498080 | MtrunA17_Chr3g0109701 | 63.636 | 473 | 170 | 1 | 20 | 490 | 20 | 492 | 0.0 | 635 |
| Msa0498080 | MtrunA17_Chr3g0142301 | 34.755 | 469 | 251 | 12 | 30 | 454 | 883 | 1340 | 2.97e-65 | 229 |
| Msa0498080 | MtrunA17_Chr1g0155921 | 34.504 | 484 | 259 | 14 | 25 | 454 | 862 | 1341 | 7.71e-64 | 224 |
| Msa0498080 | MtrunA17_Chr3g0100181 | 32.511 | 446 | 265 | 13 | 29 | 454 | 160 | 589 | 1.03e-54 | 195 |
| Msa0498080 | MtrunA17_Chr6g0484711 | 33.404 | 473 | 260 | 15 | 29 | 467 | 221 | 672 | 8.66e-54 | 193 |
| Msa0498080 | MtrunA17_Chr8g0360771 | 32.511 | 446 | 265 | 14 | 29 | 454 | 163 | 592 | 8.97e-45 | 167 |
| Msa0498080 | MtrunA17_Chr1g0171381 | 31.838 | 468 | 279 | 13 | 15 | 456 | 190 | 643 | 3.18e-42 | 160 |
| Msa0498080 | MtrunA17_Chr3g0089841 | 26.777 | 422 | 265 | 15 | 53 | 451 | 33 | 433 | 6.79e-27 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498080 | AT2G43020.1 | 77.959 | 490 | 108 | 0 | 1 | 490 | 1 | 490 | 0.0 | 795 |
| Msa0498080 | AT3G59050.1 | 78.004 | 491 | 104 | 2 | 1 | 490 | 1 | 488 | 0.0 | 790 |
| Msa0498080 | AT1G65840.1 | 60.685 | 496 | 185 | 4 | 5 | 490 | 2 | 497 | 0.0 | 621 |
| Msa0498080 | AT4G16310.2 | 33.878 | 490 | 248 | 15 | 30 | 454 | 620 | 1098 | 1.65e-62 | 221 |
| Msa0498080 | AT4G16310.3 | 33.878 | 490 | 248 | 15 | 30 | 454 | 620 | 1098 | 1.65e-62 | 221 |
| Msa0498080 | AT4G16310.5 | 33.878 | 490 | 248 | 15 | 30 | 454 | 620 | 1098 | 1.65e-62 | 221 |
| Msa0498080 | AT4G16310.1 | 33.878 | 490 | 248 | 15 | 30 | 454 | 620 | 1098 | 1.65e-62 | 221 |
| Msa0498080 | AT4G16310.4 | 33.878 | 490 | 248 | 15 | 30 | 454 | 620 | 1098 | 1.65e-62 | 221 |
| Msa0498080 | AT3G10390.4 | 32.680 | 459 | 262 | 13 | 24 | 456 | 181 | 618 | 7.37e-51 | 185 |
| Msa0498080 | AT3G10390.1 | 32.680 | 459 | 262 | 13 | 24 | 456 | 181 | 618 | 1.63e-50 | 185 |
| Msa0498080 | AT3G10390.3 | 32.680 | 459 | 262 | 13 | 24 | 456 | 233 | 670 | 2.32e-50 | 185 |
| Msa0498080 | AT3G10390.2 | 32.680 | 459 | 262 | 13 | 24 | 456 | 233 | 670 | 2.89e-50 | 184 |
| Msa0498080 | AT1G62830.1 | 33.191 | 470 | 273 | 16 | 28 | 473 | 266 | 718 | 9.26e-50 | 182 |
| Msa0498080 | AT3G13682.1 | 34.537 | 443 | 260 | 14 | 29 | 454 | 161 | 590 | 9.12e-48 | 176 |
| Msa0498080 | AT5G13700.1 | 26.872 | 454 | 283 | 15 | 53 | 486 | 30 | 454 | 6.30e-34 | 134 |
| Msa0498080 | AT4G29720.1 | 23.853 | 545 | 292 | 15 | 26 | 465 | 3 | 529 | 1.40e-32 | 130 |
Find 202 sgRNAs with CRISPR-Local
Find 588 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTTGTTTACATGCCTTC+TGG | 0.170041 | 3_4:+33674955 | Msa0498080:CDS |
| GTAAGAGTGGTTGAAGATTT+TGG | 0.174976 | 3_4:+33667906 | Msa0498080:five_prime_UTR |
| TCAATCTTACCTATAATTAT+TGG | 0.196469 | 3_4:+33676104 | Msa0498080:three_prime_UTR |
| AAGCAAACCTCTGGTTAATT+TGG | 0.198614 | 3_4:-33668082 | None:intergenic |
| ATATGATTCAAATAATATTT+AGG | 0.209494 | 3_4:+33676193 | Msa0498080:three_prime_UTR |
| GTGAGATCGGAAGAGGATTT+TGG | 0.229332 | 3_4:-33667836 | None:intergenic |
| TCGACTAATTGCAACTATTT+AGG | 0.229529 | 3_4:+33675835 | Msa0498080:three_prime_UTR |
| GCCAGTAATAACCTTAATTC+TGG | 0.235503 | 3_4:-33673594 | None:intergenic |
| ACTTCAAGATGCTTCCTTTC+AGG | 0.247076 | 3_4:+33670658 | Msa0498080:CDS |
| GTCATTGGTGGTGGCATGGC+TGG | 0.253200 | 3_4:+33670617 | Msa0498080:CDS |
| TGCTTCCGTGATTGGGAGGC+TGG | 0.257155 | 3_4:+33672895 | Msa0498080:CDS |
| TTGATAGGAATCCAGAATTA+AGG | 0.262962 | 3_4:+33673583 | Msa0498080:CDS |
| TTGACACTATAACTAAAATT+AGG | 0.281611 | 3_4:-33676165 | None:intergenic |
| TGGCCTAATGTAGAGTTCTT+AGG | 0.292763 | 3_4:+33674865 | Msa0498080:CDS |
| TGGTTAAGTTTGTCTGTAAA+TGG | 0.294823 | 3_4:+33675979 | Msa0498080:three_prime_UTR |
| CCCTGGTGGTCACGGTCTTA+TGG | 0.297326 | 3_4:+33674483 | Msa0498080:CDS |
| CCAATCCTACCAATAATTAT+AGG | 0.309647 | 3_4:-33676113 | None:intergenic |
| TCCTTGTTTACATGCCTTCT+GGG | 0.312872 | 3_4:+33674956 | Msa0498080:CDS |
| GTGCAGCCTTGTGGAGATTA+AGG | 0.314384 | 3_4:-33674924 | None:intergenic |
| TAAATGGAAGATGTGCATTA+AGG | 0.326223 | 3_4:+33675995 | Msa0498080:three_prime_UTR |
| AATACCACTGAAGTACCTTA+TGG | 0.326701 | 3_4:-33673712 | None:intergenic |
| TCCTTCCAGTCTGGGAGCCT+TGG | 0.329966 | 3_4:-33674775 | None:intergenic |
| GGTGAGTTAGAAAACTTTCC+AGG | 0.332075 | 3_4:-33667815 | None:intergenic |
| ATTTCTTGACTCCATATTGC+TGG | 0.337914 | 3_4:-33668049 | None:intergenic |
| TGTAATCATCATCTCATCTT+TGG | 0.360667 | 3_4:+33675739 | Msa0498080:exon |
| ATGGCAGCTTCCTTCCAGTC+TGG | 0.360763 | 3_4:-33674784 | None:intergenic |
| TTCAACCACTCTTACCTTAG+TGG | 0.364576 | 3_4:-33667898 | None:intergenic |
| AATCCACTTGCTTCCGTGAT+TGG | 0.366361 | 3_4:+33672887 | Msa0498080:CDS |
| TGTGCTATACGACCATGATT+TGG | 0.368647 | 3_4:+33672952 | Msa0498080:CDS |
| CCTATAATTATTGGTAGGAT+TGG | 0.372415 | 3_4:+33676113 | Msa0498080:three_prime_UTR |
| GGCTGTGCACCTCTATAGTT+TGG | 0.372808 | 3_4:+33675959 | Msa0498080:three_prime_UTR |
| TCAATCATAATCCAGCAATA+TGG | 0.374843 | 3_4:+33668038 | Msa0498080:exon |
| ATTCACACTGATTACTCGTT+TGG | 0.376822 | 3_4:+33672705 | Msa0498080:CDS |
| AAAGTTGTTCGGAGATATAA+TGG | 0.377389 | 3_4:+33674652 | Msa0498080:CDS |
| TTGGCTAGGGTATTTATAAC+AGG | 0.381256 | 3_4:-33674520 | None:intergenic |
| GTTTGGCTTTCCTGTTGACC+TGG | 0.381528 | 3_4:+33672722 | Msa0498080:CDS |
| TTATTATGAAAATATATTAG+TGG | 0.382637 | 3_4:-33676039 | None:intergenic |
| CACCCTTGACTGCAGGTTGG+AGG | 0.385422 | 3_4:+33673682 | Msa0498080:intron |
| TCTTTGGTCACCACTCCTAA+TGG | 0.386416 | 3_4:+33675755 | Msa0498080:three_prime_UTR |
| ACGAGTAATCAGTGTGAATT+CGG | 0.387049 | 3_4:-33672701 | None:intergenic |
| CCCTTGACTGCAGGTTGGAG+GGG | 0.387852 | 3_4:+33673684 | Msa0498080:intron |
| TCACCATCTGTTATTGTCAT+TGG | 0.389191 | 3_4:+33670602 | Msa0498080:CDS |
| TCACTTTGTTACGTGTTTGT+TGG | 0.391064 | 3_4:+33667993 | Msa0498080:five_prime_UTR |
| ACCCTTGACTGCAGGTTGGA+GGG | 0.394812 | 3_4:+33673683 | Msa0498080:intron |
| ATCCACTTGCTTCCGTGATT+GGG | 0.395016 | 3_4:+33672888 | Msa0498080:CDS |
| CGGAGCTGTATGAACTGGTT+CGG | 0.399248 | 3_4:+33667937 | Msa0498080:five_prime_UTR |
| GTGGTCACGGTCTTATGGTC+AGG | 0.401367 | 3_4:+33674488 | Msa0498080:CDS |
| GTAGTTGCAGATACATCTTA+TGG | 0.402239 | 3_4:+33674889 | Msa0498080:CDS |
| ATCTTCAGCCGCCATCATTC+CGG | 0.404811 | 3_4:-33675616 | None:intergenic |
| TTGCTTCCCCTGCGAAGAAC+AGG | 0.412914 | 3_4:-33675551 | None:intergenic |
| CATGATGCTCCCAGGTCAAC+AGG | 0.413656 | 3_4:-33672732 | None:intergenic |
| CCTTGTGTCTCGGTGGGGCT+CGG | 0.415357 | 3_4:+33675443 | Msa0498080:CDS |
| GTTGGAGGGGCTTGCCCATA+AGG | 0.416665 | 3_4:+33673697 | Msa0498080:CDS |
| ATCCCCACTAGTACGGTAAA+GGG | 0.417780 | 3_4:-33672924 | None:intergenic |
| GAAGCTGCCATCGCTGAACT+TGG | 0.421827 | 3_4:+33674796 | Msa0498080:CDS |
| TACAATTTCACTGAATGGTT+GGG | 0.424536 | 3_4:+33673772 | Msa0498080:CDS |
| GGAGCTGTATGAACTGGTTC+GGG | 0.426613 | 3_4:+33667938 | Msa0498080:five_prime_UTR |
| GAATCAAGTTCCCCAGGAAT+TGG | 0.428359 | 3_4:+33673189 | Msa0498080:CDS |
| AATTGAAAGACCACGCTGTA+TGG | 0.437376 | 3_4:-33673556 | None:intergenic |
| GGATTTGTTTCAGCCGGTGA+TGG | 0.439407 | 3_4:+33675674 | Msa0498080:CDS |
| GCTTCCGTGATTGGGAGGCT+GGG | 0.440070 | 3_4:+33672896 | Msa0498080:CDS |
| AGGTTGTTCTCTTAGAGTCT+AGG | 0.441740 | 3_4:+33672664 | Msa0498080:intron |
| TCAGAGTCACAAAAGTTGTT+CGG | 0.444089 | 3_4:+33674641 | Msa0498080:intron |
| TATGCACTTTATGATAAGAA+TGG | 0.446358 | 3_4:+33673166 | Msa0498080:CDS |
| ATACCACTGAAGTACCTTAT+GGG | 0.446467 | 3_4:-33673711 | None:intergenic |
| GCTATTGTTGCTGTCCCTCT+TGG | 0.453416 | 3_4:+33674721 | Msa0498080:CDS |
| TGGCAGCTTCCTTCCAGTCT+GGG | 0.455520 | 3_4:-33674783 | None:intergenic |
| ACTCCTAAGAACTCTACATT+AGG | 0.462175 | 3_4:-33674868 | None:intergenic |
| TAGTTAATGTTGTGAAGAAT+TGG | 0.463609 | 3_4:+33675914 | Msa0498080:three_prime_UTR |
| ATGCGTGTGCTGGAGCGATA+TGG | 0.464060 | 3_4:+33675645 | Msa0498080:CDS |
| TGATGGCGGCTGAAGATTGC+AGG | 0.464362 | 3_4:+33675622 | Msa0498080:CDS |
| TCTGATACAATTTCACTGAA+TGG | 0.465141 | 3_4:+33673767 | Msa0498080:CDS |
| AAAGGGAGGAAAATTCTAGA+AGG | 0.466847 | 3_4:-33667789 | None:intergenic |
| CGAATTTGTGAGATCGGAAG+AGG | 0.468316 | 3_4:-33667843 | None:intergenic |
| ATACAATTTCACTGAATGGT+TGG | 0.469296 | 3_4:+33673771 | Msa0498080:CDS |
| TTGAACCAAGGCTCCCAGAC+TGG | 0.469830 | 3_4:+33674770 | Msa0498080:CDS |
| TCATTGGTGGTGGCATGGCT+GGG | 0.470492 | 3_4:+33670618 | Msa0498080:CDS |
| TCAGTACCTTGTGTCTCGGT+GGG | 0.472113 | 3_4:+33675437 | Msa0498080:CDS |
| CCATCTGTTATTGTCATTGG+TGG | 0.476065 | 3_4:+33670605 | Msa0498080:CDS |
| CTGTTTGTAGCTCTTTGCTA+TGG | 0.477290 | 3_4:+33670554 | Msa0498080:intron |
| GCAACAAGTATGAGCTATCC+AGG | 0.482634 | 3_4:+33675570 | Msa0498080:CDS |
| TGCATTCTCCACCGGAATGA+TGG | 0.483940 | 3_4:+33675605 | Msa0498080:CDS |
| TCAGCCGGTGATGGGAGAAA+TGG | 0.486040 | 3_4:+33675683 | Msa0498080:CDS |
| ACTATATCTACCTGTGTCCT+AGG | 0.488050 | 3_4:-33674558 | None:intergenic |
| ATGCACTTTATGATAAGAAT+GGG | 0.489672 | 3_4:+33673167 | Msa0498080:CDS |
| CAGGAATTGGTAACAAAAGT+TGG | 0.495412 | 3_4:+33673202 | Msa0498080:CDS |
| GAAGGCATGTAAACAAGGAC+AGG | 0.496470 | 3_4:-33674952 | None:intergenic |
| ATACATACCTTTCCAAATCA+TGG | 0.498622 | 3_4:-33672964 | None:intergenic |
| ATATTGCTGGATTATGATTG+AGG | 0.499072 | 3_4:-33668036 | None:intergenic |
| AATGCACCATGGACAGATCC+TGG | 0.499465 | 3_4:-33675588 | None:intergenic |
| GTAGATAACCTGTTCTTCGC+AGG | 0.500303 | 3_4:+33675543 | Msa0498080:CDS |
| GTAAAAGTGACCGTGGAAAG+TGG | 0.500352 | 3_4:+33674676 | Msa0498080:CDS |
| GGTTGTTCTCTTAGAGTCTA+GGG | 0.501117 | 3_4:+33672665 | Msa0498080:intron |
| AAGCTGCCATCGCTGAACTT+GGG | 0.502576 | 3_4:+33674797 | Msa0498080:CDS |
| TTGATATTCGCCTAGGACAC+AGG | 0.503732 | 3_4:+33674548 | Msa0498080:CDS |
| ACAAATTCGCGATTCTGCAT+CGG | 0.505062 | 3_4:+33667857 | Msa0498080:five_prime_UTR |
| TTCACTGAATGGTTGGGACC+AGG | 0.505370 | 3_4:+33673778 | Msa0498080:CDS |
| TTCTGAAGTAGGATTTGCCA+TGG | 0.505663 | 3_4:+33675795 | Msa0498080:three_prime_UTR |
| CGAGCTGGATTTGTTTCAGC+CGG | 0.505755 | 3_4:+33675668 | Msa0498080:CDS |
| GCGAAGAACAGGTTATCTAC+TGG | 0.506541 | 3_4:-33675540 | None:intergenic |
| GTACTTCTCCCTGGTGGTCA+CGG | 0.506945 | 3_4:+33674475 | Msa0498080:CDS |
| TTTGGCTTTCCTGTTGACCT+GGG | 0.506960 | 3_4:+33672723 | Msa0498080:CDS |
| TCAGTGGTATTTATGCAGAA+TGG | 0.507222 | 3_4:+33673724 | Msa0498080:CDS |
| ACCATAAGACCGTGACCACC+AGG | 0.507322 | 3_4:-33674484 | None:intergenic |
| GCCATCGCTGAACTTGGGGT+TGG | 0.509174 | 3_4:+33674802 | Msa0498080:CDS |
| AGAAACGGAGCTGTATGAAC+TGG | 0.510306 | 3_4:+33667932 | Msa0498080:five_prime_UTR |
| GGGCTCGGATATAAATTCAC+TGG | 0.510358 | 3_4:+33675458 | Msa0498080:CDS |
| TGGTCACGGTCTTATGGTCA+GGG | 0.511034 | 3_4:+33674489 | Msa0498080:CDS |
| CGAAGAACAGGTTATCTACT+GGG | 0.513240 | 3_4:-33675539 | None:intergenic |
| GTTACCGGTGAGGAAGCATT+AGG | 0.513639 | 3_4:-33675057 | None:intergenic |
| GATTTGTTTCAGCCGGTGAT+GGG | 0.513807 | 3_4:+33675675 | Msa0498080:CDS |
| CAAACTTAACCAAACTATAG+AGG | 0.514616 | 3_4:-33675968 | None:intergenic |
| TATCCCCACTAGTACGGTAA+AGG | 0.515136 | 3_4:-33672925 | None:intergenic |
| AGATTGCAGGATGCGTGTGC+TGG | 0.516520 | 3_4:+33675635 | Msa0498080:CDS |
| TCTGTTATTGTCATTGGTGG+TGG | 0.517892 | 3_4:+33670608 | Msa0498080:CDS |
| TATTGTCATTGGTGGTGGCA+TGG | 0.522281 | 3_4:+33670613 | Msa0498080:CDS |
| TACCCCTTTACCGTACTAGT+GGG | 0.524830 | 3_4:+33672921 | Msa0498080:CDS |
| GAATCGCGAATTTGTGAGAT+CGG | 0.525445 | 3_4:-33667849 | None:intergenic |
| AACATCGGATTCTATCCATT+AGG | 0.525925 | 3_4:-33675770 | None:intergenic |
| TGACAGGAAGTACTTCTCCC+TGG | 0.530151 | 3_4:+33674466 | Msa0498080:intron |
| AGCTGCCATCGCTGAACTTG+GGG | 0.530403 | 3_4:+33674798 | Msa0498080:CDS |
| CTTCCGTGATTGGGAGGCTG+GGG | 0.536451 | 3_4:+33672897 | Msa0498080:CDS |
| AAGGTTGCATGGAGTTTGCA+AGG | 0.539925 | 3_4:+33672862 | Msa0498080:intron |
| TGGCAATGTTAGCAGTGTGC+AGG | 0.541458 | 3_4:+33670574 | Msa0498080:CDS |
| GTGTAATAATCCACTTGTGT+TGG | 0.542536 | 3_4:+33676215 | Msa0498080:three_prime_UTR |
| CATATAGCTATGATCAAGTA+GGG | 0.542982 | 3_4:+33675484 | Msa0498080:CDS |
| ATTTATGCAGAATGGAGGGC+TGG | 0.545277 | 3_4:+33673732 | Msa0498080:CDS |
| TCATATAGCTATGATCAAGT+AGG | 0.546091 | 3_4:+33675483 | Msa0498080:CDS |
| CACTTGCTTCCGTGATTGGG+AGG | 0.546419 | 3_4:+33672891 | Msa0498080:CDS |
| GTCCATGGTGCATTCTCCAC+CGG | 0.547012 | 3_4:+33675597 | Msa0498080:CDS |
| GAATGGGAATCAAGTTCCCC+AGG | 0.547047 | 3_4:+33673183 | Msa0498080:CDS |
| AGCTTTACCATGATGCTCCC+AGG | 0.548394 | 3_4:-33672740 | None:intergenic |
| TTCAGTACCTTGTGTCTCGG+TGG | 0.550816 | 3_4:+33675436 | Msa0498080:CDS |
| TCTTACCTATAATTATTGGT+AGG | 0.552795 | 3_4:+33676108 | Msa0498080:three_prime_UTR |
| GAATATCAAGACCCTTGGCT+AGG | 0.556541 | 3_4:-33674534 | None:intergenic |
| GCCCAGAAGGCATGTAAACA+AGG | 0.556908 | 3_4:-33674957 | None:intergenic |
| ATATATTAGTGGATGTACAT+AGG | 0.558358 | 3_4:-33676028 | None:intergenic |
| CAGGGTGACGTGCAGCCTTG+TGG | 0.561709 | 3_4:-33674933 | None:intergenic |
| CAGAGTTATCCCCACTAGTA+CGG | 0.561719 | 3_4:-33672931 | None:intergenic |
| CCTTCCTAATGCTTCCTCAC+CGG | 0.564781 | 3_4:+33675053 | Msa0498080:CDS |
| GAGTCTAGGGAAAGACTTGG+TGG | 0.566001 | 3_4:+33672678 | Msa0498080:CDS |
| GAAAACATTTATTGCTGATG+CGG | 0.570570 | 3_4:+33674699 | Msa0498080:CDS |
| TCTTTGGCAAGCCGCCCAGA+AGG | 0.571780 | 3_4:-33674970 | None:intergenic |
| AATATCAAGACCCTTGGCTA+GGG | 0.576929 | 3_4:-33674533 | None:intergenic |
| TCAATAGTGTGCAGAAGCCA+TGG | 0.577658 | 3_4:-33675812 | None:intergenic |
| ACCAAGGCTCCCAGACTGGA+AGG | 0.580515 | 3_4:+33674774 | Msa0498080:CDS |
| TAACCCCAGCCTCCCAATCA+CGG | 0.581134 | 3_4:-33672900 | None:intergenic |
| GAGGCCATTTCTCCCATCAC+CGG | 0.582511 | 3_4:-33675687 | None:intergenic |
| CTGTTGACCTGGGAGCATCA+TGG | 0.583662 | 3_4:+33672733 | Msa0498080:CDS |
| GGCTCGGATATAAATTCACT+GGG | 0.586636 | 3_4:+33675459 | Msa0498080:CDS |
| TAGATAACCTGTTCTTCGCA+GGG | 0.589108 | 3_4:+33675544 | Msa0498080:CDS |
| GTGGTATTTATGCAGAATGG+AGG | 0.590217 | 3_4:+33673727 | Msa0498080:CDS |
| TGTTATAAATACCCTAGCCA+AGG | 0.590267 | 3_4:+33674522 | Msa0498080:CDS |
| TACATACGAGATATCTGAAG+TGG | 0.590541 | 3_4:-33675720 | None:intergenic |
| TAAAAGTGACCGTGGAAAGT+GGG | 0.591051 | 3_4:+33674677 | Msa0498080:CDS |
| TAGGCGAATATCAAGACCCT+TGG | 0.592447 | 3_4:-33674539 | None:intergenic |
| ATGTTAGCAGTGTGCAGGAG+AGG | 0.596273 | 3_4:+33670579 | Msa0498080:CDS |
| TCCAACCCCAAGTTCAGCGA+TGG | 0.600909 | 3_4:-33674803 | None:intergenic |
| AGCCTCTCGTACAGTTCATG+TGG | 0.600917 | 3_4:-33675510 | None:intergenic |
| AGCTATCCAGGATCTGTCCA+TGG | 0.605077 | 3_4:+33675582 | Msa0498080:CDS |
| ATTGAGGTCAAATACCTGAA+AGG | 0.606411 | 3_4:-33670672 | None:intergenic |
| AGGTCCCAAGCCAACACAAG+TGG | 0.606730 | 3_4:-33676225 | None:intergenic |
| TTCAGCCGCCATCATTCCGG+TGG | 0.607572 | 3_4:-33675613 | None:intergenic |
| AAGGGTCTTGATATTCGCCT+AGG | 0.607787 | 3_4:+33674541 | Msa0498080:CDS |
| AGATTCAGTACCTTGTGTCT+CGG | 0.611152 | 3_4:+33675433 | Msa0498080:intron |
| TTACCCCTTTACCGTACTAG+TGG | 0.612175 | 3_4:+33672920 | Msa0498080:CDS |
| TGGTATTTATGCAGAATGGA+GGG | 0.621034 | 3_4:+33673728 | Msa0498080:CDS |
| TTGCTTTAAGTACACCAAGA+GGG | 0.622687 | 3_4:-33674735 | None:intergenic |
| TTGGTGTACTTAAAGCAAAG+AGG | 0.628228 | 3_4:+33674740 | Msa0498080:CDS |
| AGAGGATATCATTTGAACCA+AGG | 0.632510 | 3_4:+33674758 | Msa0498080:CDS |
| GCTGGAGCGATATGGCGAGC+TGG | 0.637460 | 3_4:+33675653 | Msa0498080:CDS |
| CCGAGCCCCACCGAGACACA+AGG | 0.638728 | 3_4:-33675443 | None:intergenic |
| TATACGACCATGATTTGGAA+AGG | 0.638994 | 3_4:+33672957 | Msa0498080:CDS |
| CTACTTCCTTAATCTCCACA+AGG | 0.640054 | 3_4:+33674918 | Msa0498080:CDS |
| CTCCCAATCACGGAAGCAAG+TGG | 0.641232 | 3_4:-33672890 | None:intergenic |
| CCGGTGAGGAAGCATTAGGA+AGG | 0.650028 | 3_4:-33675053 | None:intergenic |
| ATTCTCCACCGGAATGATGG+CGG | 0.650475 | 3_4:+33675608 | Msa0498080:CDS |
| CCACCAATGACAATAACAGA+TGG | 0.652194 | 3_4:-33670605 | None:intergenic |
| ACCCCTTTACCGTACTAGTG+GGG | 0.654223 | 3_4:+33672922 | Msa0498080:CDS |
| TAATGGAGTAAAAGTGACCG+TGG | 0.655219 | 3_4:+33674669 | Msa0498080:CDS |
| TCCCCACTAGTACGGTAAAG+GGG | 0.656059 | 3_4:-33672923 | None:intergenic |
| AAATAGAGTGGTTACCGGTG+AGG | 0.656355 | 3_4:-33675067 | None:intergenic |
| CAGTACCTTGTGTCTCGGTG+GGG | 0.656791 | 3_4:+33675438 | Msa0498080:CDS |
| TTAGAGTCTAGGGAAAGACT+TGG | 0.664498 | 3_4:+33672675 | Msa0498080:CDS |
| TATCTGAAGTGGGATAGTCA+AGG | 0.665598 | 3_4:-33675709 | None:intergenic |
| ACATACGAGATATCTGAAGT+GGG | 0.666300 | 3_4:-33675719 | None:intergenic |
| AACCACATGAACTGTACGAG+AGG | 0.669837 | 3_4:+33675508 | Msa0498080:CDS |
| CGGATTCTATCCATTAGGAG+TGG | 0.670411 | 3_4:-33675765 | None:intergenic |
| GTTATAAATACCCTAGCCAA+GGG | 0.673303 | 3_4:+33674523 | Msa0498080:CDS |
| AGATAACCTGTTCTTCGCAG+GGG | 0.674456 | 3_4:+33675545 | Msa0498080:CDS |
| AGTAACGCCAAATTAACCAG+AGG | 0.674698 | 3_4:+33668075 | Msa0498080:CDS |
| TTCCGGTGGAGAATGCACCA+TGG | 0.680901 | 3_4:-33675599 | None:intergenic |
| TTTGCTTTAAGTACACCAAG+AGG | 0.681981 | 3_4:-33674736 | None:intergenic |
| TTGCCCATAAGGTACTTCAG+TGG | 0.691649 | 3_4:+33673708 | Msa0498080:CDS |
| AAAGACTAGAGAAATGTACA+AGG | 0.692803 | 3_4:-33676067 | None:intergenic |
| GGTCACGGTCTTATGGTCAG+GGG | 0.695895 | 3_4:+33674490 | Msa0498080:CDS |
| CTGAAGTGGGATAGTCAAGG+AGG | 0.698975 | 3_4:-33675706 | None:intergenic |
| CCATAAGACCGTGACCACCA+GGG | 0.700855 | 3_4:-33674483 | None:intergenic |
| AAGGCATGTAAACAAGGACA+GGG | 0.701185 | 3_4:-33674951 | None:intergenic |
| TTGTTTACATGCCTTCTGGG+CGG | 0.705606 | 3_4:+33674959 | Msa0498080:CDS |
| CAGGAAGTACTTCTCCCTGG+TGG | 0.730430 | 3_4:+33674469 | Msa0498080:intron |
| GAAGATATGTCCATACAGCG+TGG | 0.743255 | 3_4:+33673546 | Msa0498080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTAAAAATATAT+TGG | + | chr3_4:33668570-33668589 | Msa0498080:intron | 0.0% |
| !! | AAATAATTATAATAATAGTG+TGG | + | chr3_4:33668286-33668305 | Msa0498080:intron | 10.0% |
| !!! | AAGTATTAATTTTTGTAAAT+TGG | + | chr3_4:33668697-33668716 | Msa0498080:intron | 10.0% |
| !!! | AGTATTAATTTTTGTAAATT+GGG | + | chr3_4:33668698-33668717 | Msa0498080:intron | 10.0% |
| !! | AAGTTTATCTAATAATAAAA+AGG | + | chr3_4:33670213-33670232 | Msa0498080:intron | 10.0% |
| !! | GAAAAATAAGAAATAAAAAA+GGG | - | chr3_4:33672096-33672115 | None:intergenic | 10.0% |
| !! | AGAAAAATAAGAAATAAAAA+AGG | - | chr3_4:33672097-33672116 | None:intergenic | 10.0% |
| !!! | AAAAAAATTGAAATTTTAGT+TGG | - | chr3_4:33673066-33673085 | None:intergenic | 10.0% |
| !! | TTATTATGAAAATATATTAG+TGG | - | chr3_4:33676042-33676061 | None:intergenic | 10.0% |
| !! | ATATGATTCAAATAATATTT+AGG | + | chr3_4:33676193-33676212 | Msa0498080:three_prime_UTR | 10.0% |
| !!! | AATAATTGATTTTTACTTGT+CGG | + | chr3_4:33668195-33668214 | Msa0498080:intron | 15.0% |
| !! | ACTTAACAATATATTATCAA+CGG | - | chr3_4:33668352-33668371 | None:intergenic | 15.0% |
| !!! | CTACATTTTTCATTTAATAA+TGG | - | chr3_4:33669162-33669181 | None:intergenic | 15.0% |
| !! | TTGTTTAGTTGAAATTTATA+TGG | + | chr3_4:33669586-33669605 | Msa0498080:intron | 15.0% |
| !! | TGTTTAGTTGAAATTTATAT+GGG | + | chr3_4:33669587-33669606 | Msa0498080:intron | 15.0% |
| !!! | TTTATTACTTTTTTAAACGT+GGG | - | chr3_4:33669826-33669845 | None:intergenic | 15.0% |
| !!! | TTTTATTACTTTTTTAAACG+TGG | - | chr3_4:33669827-33669846 | None:intergenic | 15.0% |
| !!! | CATATTTAAATACTTTTCAT+TGG | + | chr3_4:33670005-33670024 | Msa0498080:intron | 15.0% |
| !!! | TTTAATAAAAGTACCTATTA+AGG | - | chr3_4:33670068-33670087 | None:intergenic | 15.0% |
| !!! | TCTAATTAAATGATTTTCAT+TGG | - | chr3_4:33671751-33671770 | None:intergenic | 15.0% |
| !!! | TCTAATTAAATGATTTTCAT+TGG | + | chr3_4:33671751-33671770 | Msa0498080:intron | 15.0% |
| !! | TTGCATTGAAATTTATAATT+CGG | + | chr3_4:33671944-33671963 | Msa0498080:intron | 15.0% |
| !! | GATTCATAAAAATAAATACA+AGG | - | chr3_4:33672126-33672145 | None:intergenic | 15.0% |
| !!! | CCTTTTAATAAGAAAATAAA+TGG | - | chr3_4:33672824-33672843 | None:intergenic | 15.0% |
| !!! | CCATTTATTTTCTTATTAAA+AGG | + | chr3_4:33672821-33672840 | Msa0498080:intron | 15.0% |
| !! | TGATAATAAAAAAGGTTATT+TGG | + | chr3_4:33673376-33673395 | Msa0498080:intron | 15.0% |
| !! | ATTAGATAAGTCTTTATTAT+AGG | + | chr3_4:33675166-33675185 | Msa0498080:intron | 15.0% |
| !! | GACAAATAATTAAAATACAT+AGG | - | chr3_4:33675403-33675422 | None:intergenic | 15.0% |
| !! | CACATTATTATATTATACGA+AGG | + | chr3_4:33668403-33668422 | Msa0498080:intron | 20.0% |
| !! | AAAATATATTGGATACCTTA+AGG | + | chr3_4:33668581-33668600 | Msa0498080:intron | 20.0% |
| !! | ACGTCAAAAATTTCAAATTT+AGG | - | chr3_4:33668967-33668986 | None:intergenic | 20.0% |
| !! | ATTCACATACTATTAAGTTT+AGG | + | chr3_4:33669054-33669073 | Msa0498080:intron | 20.0% |
| !! | TTCACATACTATTAAGTTTA+GGG | + | chr3_4:33669055-33669074 | Msa0498080:intron | 20.0% |
| !! | TATACTAAAATCCAATAAAG+TGG | - | chr3_4:33669215-33669234 | None:intergenic | 20.0% |
| !!! | ACGTAAATTTCAAGAATTTT+TGG | + | chr3_4:33669633-33669652 | Msa0498080:intron | 20.0% |
| !!! | TATTACTCATTTTTACAAGT+GGG | - | chr3_4:33669947-33669966 | None:intergenic | 20.0% |
| !!! | AAAGTTGTGTTCTAATTTTT+TGG | - | chr3_4:33670288-33670307 | None:intergenic | 20.0% |
| !!! | GTTTGTTGGTTAAAAAATAA+CGG | + | chr3_4:33670348-33670367 | Msa0498080:intron | 20.0% |
| !!! | AAAATAACGGATAATTGATA+AGG | + | chr3_4:33670361-33670380 | Msa0498080:intron | 20.0% |
| !! | CATCTTAAGTGTTAAAAAAA+AGG | + | chr3_4:33670972-33670991 | Msa0498080:intron | 20.0% |
| !! | AATAATAAAGATGTAGGATA+TGG | - | chr3_4:33671028-33671047 | None:intergenic | 20.0% |
| !!! | TCTTTATTATTAGCCTAAAA+AGG | + | chr3_4:33671037-33671056 | Msa0498080:intron | 20.0% |
| !!! | CTTTATTATTAGCCTAAAAA+GGG | + | chr3_4:33671038-33671057 | Msa0498080:intron | 20.0% |
| !!! | TATAGACAATTCTTTTTCAA+TGG | + | chr3_4:33671539-33671558 | Msa0498080:intron | 20.0% |
| !!! | ATAGACAATTCTTTTTCAAT+GGG | + | chr3_4:33671540-33671559 | Msa0498080:intron | 20.0% |
| !! | AATACCTAAATTAAGAAATG+TGG | + | chr3_4:33671664-33671683 | Msa0498080:intron | 20.0% |
| !! | ATACCTAAATTAAGAAATGT+GGG | + | chr3_4:33671665-33671684 | Msa0498080:intron | 20.0% |
| !! | TCAGTCTATTCTAATTAAAA+TGG | + | chr3_4:33671801-33671820 | Msa0498080:intron | 20.0% |
| !! | TGCATTGAAATTTATAATTC+GGG | + | chr3_4:33671945-33671964 | Msa0498080:intron | 20.0% |
| !! | TAAAACTATAGCTCTTATAA+GGG | + | chr3_4:33672028-33672047 | Msa0498080:intron | 20.0% |
| !!! | TTTTCTTTTATATTTGCTTG+AGG | + | chr3_4:33672434-33672453 | Msa0498080:intron | 20.0% |
| !! | AAAAACAAATAACTACTTTC+AGG | - | chr3_4:33672462-33672481 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAATTGTTTGGTC+AGG | + | chr3_4:33672644-33672663 | Msa0498080:intron | 20.0% |
| !!! | AGTATTTGAAACTATTTTAC+TGG | + | chr3_4:33673228-33673247 | Msa0498080:CDS | 20.0% |
| !!! | TCTTATTTAGTCTTGATATT+TGG | + | chr3_4:33673264-33673283 | Msa0498080:intron | 20.0% |
| !!! | TTCTGGTTTGATAATAAAAA+AGG | + | chr3_4:33673368-33673387 | Msa0498080:intron | 20.0% |
| !!! | GGAAAAAAATATTTTTACTG+TGG | - | chr3_4:33673420-33673439 | None:intergenic | 20.0% |
| !! | ATCATTTAGTGTGTAAATTA+AGG | - | chr3_4:33673877-33673896 | None:intergenic | 20.0% |
| !! | GTTTAATTAAGAAACATAAC+AGG | - | chr3_4:33674611-33674630 | None:intergenic | 20.0% |
| !!! | TACATTTTGAGAATGTATTT+TGG | + | chr3_4:33674845-33674864 | Msa0498080:CDS | 20.0% |
| !! | TGAAATAAGTAAAAATAGAG+TGG | - | chr3_4:33675082-33675101 | None:intergenic | 20.0% |
| !! | TTGTAGTATCAATATGAATA+TGG | - | chr3_4:33675250-33675269 | None:intergenic | 20.0% |
| !!! | GCTTTAATTTAGTTAATTTG+TGG | + | chr3_4:33675377-33675396 | Msa0498080:intron | 20.0% |
| !! | TCAATCTTACCTATAATTAT+TGG | + | chr3_4:33676104-33676123 | Msa0498080:three_prime_UTR | 20.0% |
| !! | TTGACACTATAACTAAAATT+AGG | - | chr3_4:33676168-33676187 | None:intergenic | 20.0% |
| ! | ATTATGATTGAGGAGAAAAA+TGG | - | chr3_4:33668029-33668048 | None:intergenic | 25.0% |
| ! | GTAAATTGGGATCATTATAT+TGG | + | chr3_4:33668711-33668730 | Msa0498080:intron | 25.0% |
| ! | ATATTGGCCATTACTTAAAA+AGG | + | chr3_4:33668727-33668746 | Msa0498080:intron | 25.0% |
| ! | TATTGGCCATTACTTAAAAA+GGG | + | chr3_4:33668728-33668747 | Msa0498080:intron | 25.0% |
| !! | GTTGTTTATATGGTATGTTT+TGG | + | chr3_4:33668790-33668809 | Msa0498080:intron | 25.0% |
| !!! | TATGGTATGTTTTGGTTTAA+AGG | + | chr3_4:33668798-33668817 | Msa0498080:intron | 25.0% |
| !! | TTCAAATTTAGGATACGATA+CGG | - | chr3_4:33668956-33668975 | None:intergenic | 25.0% |
| ! | TAATAGTATGTGAATAAGTG+TGG | - | chr3_4:33669049-33669068 | None:intergenic | 25.0% |
| ! | ATGTATCTACCTTAAACTTA+AGG | - | chr3_4:33669087-33669106 | None:intergenic | 25.0% |
| !!! | GTTTAAGGTAGATACATTTT+TGG | + | chr3_4:33669090-33669109 | Msa0498080:intron | 25.0% |
| !! | TGAGTTAATATTTTTCTGAG+AGG | + | chr3_4:33669115-33669134 | Msa0498080:intron | 25.0% |
| !!! | TTAATATTTTTCTGAGAGGA+TGG | + | chr3_4:33669119-33669138 | Msa0498080:intron | 25.0% |
| ! | TCACATGTAATGACTTATTA+TGG | - | chr3_4:33669391-33669410 | None:intergenic | 25.0% |
| !! | AGTCTAAAATTCTCAATAAC+TGG | - | chr3_4:33669516-33669535 | None:intergenic | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | - | chr3_4:33669865-33669884 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | - | chr3_4:33669866-33669885 | None:intergenic | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | + | chr3_4:33669879-33669898 | Msa0498080:intron | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | - | chr3_4:33669865-33669884 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | - | chr3_4:33669866-33669885 | None:intergenic | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | + | chr3_4:33669879-33669898 | Msa0498080:intron | 25.0% |
| !!! | CTATTACTCATTTTTACAAG+TGG | - | chr3_4:33669948-33669967 | None:intergenic | 25.0% |
| ! | TGTTTCATATGTAAAGATAG+TGG | + | chr3_4:33669980-33669999 | Msa0498080:intron | 25.0% |
| ! | GTTTCATATGTAAAGATAGT+GGG | + | chr3_4:33669981-33670000 | Msa0498080:intron | 25.0% |
| ! | GATGTTTAAACGATACTTAA+TGG | + | chr3_4:33670423-33670442 | Msa0498080:intron | 25.0% |
| ! | TCAACGAGCATAAAATTATT+GGG | - | chr3_4:33670466-33670485 | None:intergenic | 25.0% |
| ! | GCTCATAAATCAAAATATTG+AGG | - | chr3_4:33670691-33670710 | None:intergenic | 25.0% |
| ! | TAGGCTAATAATAAAGATGT+AGG | - | chr3_4:33671034-33671053 | None:intergenic | 25.0% |
| !! | CAATTTTGTAATCCCTTTTT+AGG | - | chr3_4:33671053-33671072 | None:intergenic | 25.0% |
| ! | AGACTATTAATCTTACTTGT+TGG | + | chr3_4:33671201-33671220 | Msa0498080:intron | 25.0% |
| ! | GCAAAAAAATCAAAATGGTA+TGG | - | chr3_4:33671404-33671423 | None:intergenic | 25.0% |
| ! | AAAGGGCAAAAAAATCAAAA+TGG | - | chr3_4:33671409-33671428 | None:intergenic | 25.0% |
| !! | AGGCTTTTGTAAAGTAAAAA+GGG | - | chr3_4:33671426-33671445 | None:intergenic | 25.0% |
| ! | ATACAAATTGCATAGTTTCA+TGG | - | chr3_4:33671507-33671526 | None:intergenic | 25.0% |
| !!! | TAGACAATTCTTTTTCAATG+GGG | + | chr3_4:33671541-33671560 | Msa0498080:intron | 25.0% |
| !!! | ACTTGTATGAAAACTAGTTT+TGG | + | chr3_4:33671601-33671620 | Msa0498080:intron | 25.0% |
| !!! | TATGAAAACTAGTTTTGGAA+TGG | + | chr3_4:33671606-33671625 | Msa0498080:intron | 25.0% |
| ! | TATCCCACATTTCTTAATTT+AGG | - | chr3_4:33671671-33671690 | None:intergenic | 25.0% |
| ! | AAATTAAGAAATGTGGGATA+TGG | + | chr3_4:33671671-33671690 | Msa0498080:intron | 25.0% |
| ! | GTCTATTCTAATTAAAATGG+TGG | + | chr3_4:33671804-33671823 | Msa0498080:intron | 25.0% |
| !! | TAATTAAAATGGTGGAAATC+TGG | + | chr3_4:33671812-33671831 | Msa0498080:intron | 25.0% |
| ! | GTAAAACTATAGCTCTTATA+AGG | + | chr3_4:33672027-33672046 | Msa0498080:intron | 25.0% |
| ! | TACATGCAACAATTGAATTT+AGG | + | chr3_4:33672060-33672079 | Msa0498080:intron | 25.0% |
| ! | AATGCATATTAATTGACTAC+AGG | - | chr3_4:33672594-33672613 | None:intergenic | 25.0% |
| !! | ACATATAATACCTTTTACGT+TGG | - | chr3_4:33673107-33673126 | None:intergenic | 25.0% |
| ! | TATGCACTTTATGATAAGAA+TGG | + | chr3_4:33673166-33673185 | Msa0498080:CDS | 25.0% |
| ! | ATGCACTTTATGATAAGAAT+GGG | + | chr3_4:33673167-33673186 | Msa0498080:CDS | 25.0% |
| !!! | ATTTGAAACTATTTTACTGG+AGG | + | chr3_4:33673231-33673250 | Msa0498080:CDS | 25.0% |
| ! | GTTTACTACAAATGATTGTT+AGG | + | chr3_4:33673286-33673305 | Msa0498080:intron | 25.0% |
| !! | TACAAATGATTGTTAGGTTT+TGG | + | chr3_4:33673292-33673311 | Msa0498080:intron | 25.0% |
| !! | ACAAATGATTGTTAGGTTTT+GGG | + | chr3_4:33673293-33673312 | Msa0498080:intron | 25.0% |
| !!! | AACCTTTGAAATTTTGTACT+TGG | + | chr3_4:33673486-33673505 | Msa0498080:intron | 25.0% |
| ! | AACCAAGTACAAAATTTCAA+AGG | - | chr3_4:33673491-33673510 | None:intergenic | 25.0% |
| !!! | GTCTTTCAATTGTTTTTGAT+AGG | + | chr3_4:33673568-33673587 | Msa0498080:CDS | 25.0% |
| !! | GTTGATTTCTTTAAATTACC+TGG | - | chr3_4:33673799-33673818 | None:intergenic | 25.0% |
| ! | ACTAAATGATTTACTCTCTT+TGG | + | chr3_4:33673887-33673906 | Msa0498080:intron | 25.0% |
| ! | CAAATTATATCTTTCACTAC+AGG | - | chr3_4:33673931-33673950 | None:intergenic | 25.0% |
| ! | CAACACAATTACATGATTAT+CGG | - | chr3_4:33674008-33674027 | None:intergenic | 25.0% |
| !! | GTATTTTCTAATGTTCTTCA+TGG | - | chr3_4:33674320-33674339 | None:intergenic | 25.0% |
| ! | TTTGCAATATCCTGTAATTA+GGG | - | chr3_4:33674392-33674411 | None:intergenic | 25.0% |
| !!! | AGACATTTTTTCAATGTCTT+TGG | - | chr3_4:33674989-33675008 | None:intergenic | 25.0% |
| ! | GACTTATCTAATCTTATGTT+TGG | - | chr3_4:33675158-33675177 | None:intergenic | 25.0% |
| ! | TAGTTAATGTTGTGAAGAAT+TGG | + | chr3_4:33675914-33675933 | Msa0498080:three_prime_UTR | 25.0% |
| !! | GATATATGAATATTTTGCAG+AGG | + | chr3_4:33675938-33675957 | Msa0498080:three_prime_UTR | 25.0% |
| !! | ATATATTAGTGGATGTACAT+AGG | - | chr3_4:33676031-33676050 | None:intergenic | 25.0% |
| ! | TCTTACCTATAATTATTGGT+AGG | + | chr3_4:33676108-33676127 | Msa0498080:three_prime_UTR | 25.0% |
| GAAAACTTTCCAGGAAAAAA+GGG | - | chr3_4:33667809-33667828 | None:intergenic | 30.0% | |
| AGAAAACTTTCCAGGAAAAA+AGG | - | chr3_4:33667810-33667829 | None:intergenic | 30.0% | |
| AGAATTTCGAAAAACCACTA+AGG | + | chr3_4:33667884-33667903 | Msa0498080:five_prime_UTR | 30.0% | |
| !! | TGAAGATTTTGGAAGAGAAA+CGG | + | chr3_4:33667917-33667936 | Msa0498080:five_prime_UTR | 30.0% |
| ATATTGCTGGATTATGATTG+AGG | - | chr3_4:33668039-33668058 | None:intergenic | 30.0% | |
| TCAATCATAATCCAGCAATA+TGG | + | chr3_4:33668038-33668057 | Msa0498080:exon | 30.0% | |
| AAACTAATAAAGCAAACCTC+TGG | - | chr3_4:33668094-33668113 | None:intergenic | 30.0% | |
| TAAATCATTCGGATACTTCT+GGG | - | chr3_4:33668545-33668564 | None:intergenic | 30.0% | |
| TTAAATCATTCGGATACTTC+TGG | - | chr3_4:33668546-33668565 | None:intergenic | 30.0% | |
| TAAATCATTCGGATACTTCT+GGG | - | chr3_4:33668545-33668564 | None:intergenic | 30.0% | |
| TTAAATCATTCGGATACTTC+TGG | - | chr3_4:33668546-33668565 | None:intergenic | 30.0% | |
| !!! | TAGTCACCCTTTTTAAGTAA+TGG | - | chr3_4:33668737-33668756 | None:intergenic | 30.0% |
| GGTTTAAAGGATATCTTAGT+TGG | + | chr3_4:33668811-33668830 | Msa0498080:intron | 30.0% | |
| TACACCAAGTCAAAATACAA+TGG | - | chr3_4:33668845-33668864 | None:intergenic | 30.0% | |
| ! | TACAAAGTGTAAGTTTTACG+TGG | - | chr3_4:33669191-33669210 | None:intergenic | 30.0% |
| ACACTTTGTAACCACTTTAT+TGG | + | chr3_4:33669201-33669220 | Msa0498080:intron | 30.0% | |
| ACGTGCATGAATTGTTTATT+TGG | + | chr3_4:33669412-33669431 | Msa0498080:intron | 30.0% | |
| TGGGTTTCAAGAATTTAAGT+AGG | + | chr3_4:33669606-33669625 | Msa0498080:intron | 30.0% | |
| ! | TTAAATTAGAGCATCTCCAA+TGG | + | chr3_4:33669677-33669696 | Msa0498080:intron | 30.0% |
| ! | TAAATTAGAGCATCTCCAAT+GGG | + | chr3_4:33669678-33669697 | Msa0498080:intron | 30.0% |
| GTAATAAAACGTGTACTACT+TGG | + | chr3_4:33669838-33669857 | Msa0498080:intron | 30.0% | |
| !! | TAAAATAAGAGCATCCACAA+TGG | - | chr3_4:33670152-33670171 | None:intergenic | 30.0% |
| AAACGCAGATAAAAGTTTGT+TGG | + | chr3_4:33670334-33670353 | Msa0498080:intron | 30.0% | |
| CAACGAGCATAAAATTATTG+GGG | - | chr3_4:33670465-33670484 | None:intergenic | 30.0% | |
| CTCAACGAGCATAAAATTAT+TGG | - | chr3_4:33670467-33670486 | None:intergenic | 30.0% | |
| ! | ATTTTATGCTCGTTGAGAAA+TGG | + | chr3_4:33670470-33670489 | Msa0498080:intron | 30.0% |
| ! | TTTTATGCTCGTTGAGAAAT+GGG | + | chr3_4:33670471-33670490 | Msa0498080:intron | 30.0% |
| TGATTGCAATTATCCGTTAA+TGG | + | chr3_4:33670795-33670814 | Msa0498080:intron | 30.0% | |
| GATTGCAATTATCCGTTAAT+GGG | + | chr3_4:33670796-33670815 | Msa0498080:intron | 30.0% | |
| GGAGTTCTTGACAAAAAAAA+TGG | - | chr3_4:33671144-33671163 | None:intergenic | 30.0% | |
| ! | TTTTTGTCAAGAACTCCTTT+TGG | + | chr3_4:33671147-33671166 | Msa0498080:intron | 30.0% |
| ! | TCCTTTTGGATTTAATTGCA+AGG | + | chr3_4:33671161-33671180 | Msa0498080:intron | 30.0% |
| ACCTTGCAATTAAATCCAAA+AGG | - | chr3_4:33671165-33671184 | None:intergenic | 30.0% | |
| TGGATTTAATTGCAAGGTAA+TGG | + | chr3_4:33671167-33671186 | Msa0498080:intron | 30.0% | |
| ATCAGCAAGTTATCTAATCT+TGG | - | chr3_4:33671265-33671284 | None:intergenic | 30.0% | |
| ! | GAGGCTTTTGTAAAGTAAAA+AGG | - | chr3_4:33671427-33671446 | None:intergenic | 30.0% |
| TTTACTTTACAAAAGCCTCT+AGG | + | chr3_4:33671428-33671447 | Msa0498080:intron | 30.0% | |
| TTACTTTACAAAAGCCTCTA+GGG | + | chr3_4:33671429-33671448 | Msa0498080:intron | 30.0% | |
| !! | CTAGTTTTCATACAAGTTGA+AGG | - | chr3_4:33671598-33671617 | None:intergenic | 30.0% |
| TACTAAGAATTTGATGTGAG+TGG | + | chr3_4:33671843-33671862 | Msa0498080:intron | 30.0% | |
| !!! | TGTGATTTTTTTTCCTGCTT+TGG | + | chr3_4:33671905-33671924 | Msa0498080:intron | 30.0% |
| ! | GATACTTGCTAGTTTAGATT+TGG | + | chr3_4:33671982-33672001 | Msa0498080:intron | 30.0% |
| ! | GTCGTTTCTTATTTAGTAAC+TGG | + | chr3_4:33672369-33672388 | Msa0498080:intron | 30.0% |
| !! | ATACATATTTTTGTAGCCTG+TGG | + | chr3_4:33672394-33672413 | Msa0498080:intron | 30.0% |
| ! | GTTCCCTAATATTTGAAACT+TGG | + | chr3_4:33672552-33672571 | Msa0498080:intron | 30.0% |
| GCTCCAAGTTTCAAATATTA+GGG | - | chr3_4:33672558-33672577 | None:intergenic | 30.0% | |
| AGCTCCAAGTTTCAAATATT+AGG | - | chr3_4:33672559-33672578 | None:intergenic | 30.0% | |
| ! | AATATGCATTTTCAGAGTCA+AGG | + | chr3_4:33672604-33672623 | Msa0498080:intron | 30.0% |
| ! | ATATGCATTTTCAGAGTCAA+GGG | + | chr3_4:33672605-33672624 | Msa0498080:intron | 30.0% |
| !!! | GAACACTTTTTTCCTGTTTA+AGG | + | chr3_4:33672843-33672862 | Msa0498080:intron | 30.0% |
| ATACATACCTTTCCAAATCA+TGG | - | chr3_4:33672967-33672986 | None:intergenic | 30.0% | |
| CGTTGGATAAAACTAGAAAA+AGG | - | chr3_4:33673090-33673109 | None:intergenic | 30.0% | |
| !!! | CTAGTTTTATCCAACGTAAA+AGG | + | chr3_4:33673094-33673113 | Msa0498080:intron | 30.0% |
| ! | AACTTTTGTTACCAATTCCT+GGG | - | chr3_4:33673203-33673222 | None:intergenic | 30.0% |
| ! | CAAATGATTGTTAGGTTTTG+GGG | + | chr3_4:33673294-33673313 | Msa0498080:intron | 30.0% |
| AAACATCAGAAGAGATGATT+TGG | - | chr3_4:33673441-33673460 | None:intergenic | 30.0% | |
| TTGATAGGAATCCAGAATTA+AGG | + | chr3_4:33673583-33673602 | Msa0498080:CDS | 30.0% | |
| TCCAGAATTAAGGTTATTAC+TGG | + | chr3_4:33673593-33673612 | Msa0498080:intron | 30.0% | |
| TCTGATACAATTTCACTGAA+TGG | + | chr3_4:33673767-33673786 | Msa0498080:CDS | 30.0% | |
| ATACAATTTCACTGAATGGT+TGG | + | chr3_4:33673771-33673790 | Msa0498080:CDS | 30.0% | |
| TACAATTTCACTGAATGGTT+GGG | + | chr3_4:33673772-33673791 | Msa0498080:CDS | 30.0% | |
| !! | GTGTTGACTGATCTATAAAT+AGG | + | chr3_4:33674022-33674041 | Msa0498080:intron | 30.0% |
| TATTGAAATATAGAGAGACC+AGG | + | chr3_4:33674056-33674075 | Msa0498080:intron | 30.0% | |
| TTACATGCATAACAACACAA+TGG | - | chr3_4:33674100-33674119 | None:intergenic | 30.0% | |
| TAGAATCAAACAAATCCAGA+TGG | + | chr3_4:33674166-33674185 | Msa0498080:intron | 30.0% | |
| AGAATCAAACAAATCCAGAT+GGG | + | chr3_4:33674167-33674186 | Msa0498080:intron | 30.0% | |
| TAAAAGATTCCTTTCATGAC+AGG | + | chr3_4:33674197-33674216 | Msa0498080:intron | 30.0% | |
| ATGCTGTGAAATCAGTATTA+TGG | + | chr3_4:33674243-33674262 | Msa0498080:intron | 30.0% | |
| AAATCAGTATTATGGCTGTA+GGG | + | chr3_4:33674251-33674270 | Msa0498080:intron | 30.0% | |
| !!! | CTAGGTCAACTTAGTTTTAA+AGG | - | chr3_4:33674364-33674383 | None:intergenic | 30.0% |
| GTTTGCAATATCCTGTAATT+AGG | - | chr3_4:33674393-33674412 | None:intergenic | 30.0% | |
| !!! | ACCTCTGAATATATTTTGAC+AGG | + | chr3_4:33674450-33674469 | Msa0498080:intron | 30.0% |
| TCCTGTCAAAATATATTCAG+AGG | - | chr3_4:33674454-33674473 | None:intergenic | 30.0% | |
| AAAGTTGTTCGGAGATATAA+TGG | + | chr3_4:33674652-33674671 | Msa0498080:CDS | 30.0% | |
| GAAAACATTTATTGCTGATG+CGG | + | chr3_4:33674699-33674718 | Msa0498080:CDS | 30.0% | |
| AGTAAAAATAGAGTGGTTAC+CGG | - | chr3_4:33675075-33675094 | None:intergenic | 30.0% | |
| TCATATAGCTATGATCAAGT+AGG | + | chr3_4:33675483-33675502 | Msa0498080:CDS | 30.0% | |
| CATATAGCTATGATCAAGTA+GGG | + | chr3_4:33675484-33675503 | Msa0498080:CDS | 30.0% | |
| TGTAATCATCATCTCATCTT+TGG | + | chr3_4:33675739-33675758 | Msa0498080:exon | 30.0% | |
| TCCTACTTCAGAAAAAACAT+CGG | - | chr3_4:33675788-33675807 | None:intergenic | 30.0% | |
| TCGACTAATTGCAACTATTT+AGG | + | chr3_4:33675835-33675854 | Msa0498080:three_prime_UTR | 30.0% | |
| CAAACTTAACCAAACTATAG+AGG | - | chr3_4:33675971-33675990 | None:intergenic | 30.0% | |
| TGGTTAAGTTTGTCTGTAAA+TGG | + | chr3_4:33675979-33675998 | Msa0498080:three_prime_UTR | 30.0% | |
| TAAATGGAAGATGTGCATTA+AGG | + | chr3_4:33675995-33676014 | Msa0498080:three_prime_UTR | 30.0% | |
| AAAGACTAGAGAAATGTACA+AGG | - | chr3_4:33676070-33676089 | None:intergenic | 30.0% | |
| CCAATCCTACCAATAATTAT+AGG | - | chr3_4:33676116-33676135 | None:intergenic | 30.0% | |
| CCTATAATTATTGGTAGGAT+TGG | + | chr3_4:33676113-33676132 | Msa0498080:three_prime_UTR | 30.0% | |
| AAAGGGAGGAAAATTCTAGA+AGG | - | chr3_4:33667792-33667811 | None:intergenic | 35.0% | |
| ! | AATTTTCCTCCCTTTTTTCC+TGG | + | chr3_4:33667797-33667816 | Msa0498080:five_prime_UTR | 35.0% |
| AAAAACCACTAAGGTAAGAG+TGG | + | chr3_4:33667893-33667912 | Msa0498080:five_prime_UTR | 35.0% | |
| ! | GTAAGAGTGGTTGAAGATTT+TGG | + | chr3_4:33667906-33667925 | Msa0498080:five_prime_UTR | 35.0% |
| TCACTTTGTTACGTGTTTGT+TGG | + | chr3_4:33667993-33668012 | Msa0498080:five_prime_UTR | 35.0% | |
| ATTTCTTGACTCCATATTGC+TGG | - | chr3_4:33668052-33668071 | None:intergenic | 35.0% | |
| AAGCAAACCTCTGGTTAATT+TGG | - | chr3_4:33668085-33668104 | None:intergenic | 35.0% | |
| !! | GATTTTTACTTGTCGGTGTT+TGG | + | chr3_4:33668202-33668221 | Msa0498080:intron | 35.0% |
| TGTGGCATGAAATGAATTAC+AGG | + | chr3_4:33668304-33668323 | Msa0498080:intron | 35.0% | |
| GATACCTTAAGGATACGTTA+AGG | + | chr3_4:33668592-33668611 | Msa0498080:intron | 35.0% | |
| GTATCCTTAACGTATCCTTA+AGG | - | chr3_4:33668599-33668618 | None:intergenic | 35.0% | |
| TGACTATCTTCATACTACCT+TGG | + | chr3_4:33668751-33668770 | Msa0498080:intron | 35.0% | |
| CATAGTGCAGGTTGTTTATA+TGG | + | chr3_4:33668780-33668799 | Msa0498080:intron | 35.0% | |
| !! | AGGATATCTTAGTTGGTGAA+TGG | + | chr3_4:33668818-33668837 | Msa0498080:intron | 35.0% |
| !!! | TGGTCCATTGTATTTTGACT+TGG | + | chr3_4:33668838-33668857 | Msa0498080:intron | 35.0% |
| GGGTCATTTCCTTAAGTTTA+AGG | + | chr3_4:33669075-33669094 | Msa0498080:intron | 35.0% | |
| ! | AAATTAGAGCATCTCCAATG+GGG | + | chr3_4:33669679-33669698 | Msa0498080:intron | 35.0% |
| ! | ATTTTTCTTCCTCCAATGGA+GGG | - | chr3_4:33669741-33669760 | None:intergenic | 35.0% |
| ! | AATTTTTCTTCCTCCAATGG+AGG | - | chr3_4:33669742-33669761 | None:intergenic | 35.0% |
| ! | CTCAATTTTTCTTCCTCCAA+TGG | - | chr3_4:33669745-33669764 | None:intergenic | 35.0% |
| CCAATGGCAATACACTAATA+AGG | - | chr3_4:33670034-33670053 | None:intergenic | 35.0% | |
| CCTTATTAGTGTATTGCCAT+TGG | + | chr3_4:33670031-33670050 | Msa0498080:intron | 35.0% | |
| ACAATGGTAGTTTCCTAACA+AGG | - | chr3_4:33670136-33670155 | None:intergenic | 35.0% | |
| TTGTTAGGAAACTACCATTG+TGG | + | chr3_4:33670135-33670154 | Msa0498080:intron | 35.0% | |
| TTTATGCTCGTTGAGAAATG+GGG | + | chr3_4:33670472-33670491 | Msa0498080:intron | 35.0% | |
| GTGTGATTTGAAAATGAGAC+TGG | + | chr3_4:33670497-33670516 | Msa0498080:intron | 35.0% | |
| ! | AATGAGACTGGTTGATCTAT+TGG | + | chr3_4:33670509-33670528 | Msa0498080:intron | 35.0% |
| ! | ATGAGACTGGTTGATCTATT+GGG | + | chr3_4:33670510-33670529 | Msa0498080:intron | 35.0% |
| TCACCATCTGTTATTGTCAT+TGG | + | chr3_4:33670602-33670621 | Msa0498080:CDS | 35.0% | |
| ATTGAGGTCAAATACCTGAA+AGG | - | chr3_4:33670675-33670694 | None:intergenic | 35.0% | |
| CAATTATCCGTTAATGGGAT+TGG | + | chr3_4:33670801-33670820 | Msa0498080:intron | 35.0% | |
| ATGTAGGATATGGCAGTTAT+TGG | - | chr3_4:33671018-33671037 | None:intergenic | 35.0% | |
| GTTATCTAATCTTGGAGCAT+TGG | - | chr3_4:33671257-33671276 | None:intergenic | 35.0% | |
| !! | TACATAAGAGCACTTTCTCT+TGG | - | chr3_4:33671466-33671485 | None:intergenic | 35.0% |
| GCAAACACATGAATTACTGT+CGG | - | chr3_4:33672148-33672167 | None:intergenic | 35.0% | |
| !! | ACTTCATGACTTGCATTTTG+GGG | - | chr3_4:33672170-33672189 | None:intergenic | 35.0% |
| !! | CACTTCATGACTTGCATTTT+GGG | - | chr3_4:33672171-33672190 | None:intergenic | 35.0% |
| TGCATGATTCCTAAAAAGGA+GGG | - | chr3_4:33672332-33672351 | None:intergenic | 35.0% | |
| GTAGAGAACATATAAACCAC+AGG | - | chr3_4:33672413-33672432 | None:intergenic | 35.0% | |
| ATTTCATCATTGAGGCAATC+AGG | - | chr3_4:33672486-33672505 | None:intergenic | 35.0% | |
| TCCACTTCATTTCATCATTG+AGG | - | chr3_4:33672494-33672513 | None:intergenic | 35.0% | |
| ACGAGTAATCAGTGTGAATT+CGG | - | chr3_4:33672704-33672723 | None:intergenic | 35.0% | |
| ! | ATTCACACTGATTACTCGTT+TGG | + | chr3_4:33672705-33672724 | Msa0498080:CDS | 35.0% |
| !! | TTTTCCTGTTTAAGGTTGCA+TGG | + | chr3_4:33672851-33672870 | Msa0498080:intron | 35.0% |
| ! | TATACGACCATGATTTGGAA+AGG | + | chr3_4:33672957-33672976 | Msa0498080:CDS | 35.0% |
| TGTTATCTACTATGCAAGTG+TGG | - | chr3_4:33673023-33673042 | None:intergenic | 35.0% | |
| TAAAGTGCATAGCTGGAATA+AGG | - | chr3_4:33673157-33673176 | None:intergenic | 35.0% | |
| CTTATCATAAAGTGCATAGC+TGG | - | chr3_4:33673164-33673183 | None:intergenic | 35.0% | |
| ! | ACTTTTGTTACCAATTCCTG+GGG | - | chr3_4:33673202-33673221 | None:intergenic | 35.0% |
| ! | CAACTTTTGTTACCAATTCC+TGG | - | chr3_4:33673204-33673223 | None:intergenic | 35.0% |
| ! | CAGGAATTGGTAACAAAAGT+TGG | + | chr3_4:33673202-33673221 | Msa0498080:CDS | 35.0% |
| AAACCAGAAATGTAGTGCAA+AGG | - | chr3_4:33673357-33673376 | None:intergenic | 35.0% | |
| GCCAGTAATAACCTTAATTC+TGG | - | chr3_4:33673597-33673616 | None:intergenic | 35.0% | |
| CCGCTTAAAGAAAACAATCA+CGG | - | chr3_4:33673642-33673661 | None:intergenic | 35.0% | |
| ! | CCGTGATTGTTTTCTTTAAG+CGG | + | chr3_4:33673639-33673658 | Msa0498080:intron | 35.0% |
| ! | ATACCACTGAAGTACCTTAT+GGG | - | chr3_4:33673714-33673733 | None:intergenic | 35.0% |
| ! | AATACCACTGAAGTACCTTA+TGG | - | chr3_4:33673715-33673734 | None:intergenic | 35.0% |
| TCAGTGGTATTTATGCAGAA+TGG | + | chr3_4:33673724-33673743 | Msa0498080:CDS | 35.0% | |
| TGGTATTTATGCAGAATGGA+GGG | + | chr3_4:33673728-33673747 | Msa0498080:CDS | 35.0% | |
| TAAATTAAGGACGAGAAGGT+GGG | - | chr3_4:33673864-33673883 | None:intergenic | 35.0% | |
| TGTGTAAATTAAGGACGAGA+AGG | - | chr3_4:33673868-33673887 | None:intergenic | 35.0% | |
| CATGATTATCGGTCATAGAA+AGG | - | chr3_4:33673997-33674016 | None:intergenic | 35.0% | |
| AAATATAGAGAGACCAGGTT+AGG | + | chr3_4:33674061-33674080 | Msa0498080:intron | 35.0% | |
| AATATAGAGAGACCAGGTTA+GGG | + | chr3_4:33674062-33674081 | Msa0498080:intron | 35.0% | |
| ACAAAATGACCTGTCATGAA+AGG | - | chr3_4:33674209-33674228 | None:intergenic | 35.0% | |
| GAAATCAGTATTATGGCTGT+AGG | + | chr3_4:33674250-33674269 | Msa0498080:intron | 35.0% | |
| TTTCTAATGTTCTTCATGGC+AGG | - | chr3_4:33674316-33674335 | None:intergenic | 35.0% | |
| CCTGTAATTAGGGTAAAACT+AGG | - | chr3_4:33674382-33674401 | None:intergenic | 35.0% | |
| !!! | CCTAGTTTTACCCTAATTAC+AGG | + | chr3_4:33674379-33674398 | Msa0498080:intron | 35.0% |
| ! | TTGGCTAGGGTATTTATAAC+AGG | - | chr3_4:33674523-33674542 | None:intergenic | 35.0% |
| TGTTATAAATACCCTAGCCA+AGG | + | chr3_4:33674522-33674541 | Msa0498080:CDS | 35.0% | |
| GTTATAAATACCCTAGCCAA+GGG | + | chr3_4:33674523-33674542 | Msa0498080:CDS | 35.0% | |
| !! | ACTTTTGTGACTCTGAAAAG+AGG | - | chr3_4:33674637-33674656 | None:intergenic | 35.0% |
| TCAGAGTCACAAAAGTTGTT+CGG | + | chr3_4:33674641-33674660 | Msa0498080:intron | 35.0% | |
| ! | AAATGTTTTCCCACTTTCCA+CGG | - | chr3_4:33674689-33674708 | None:intergenic | 35.0% |
| ! | TTGCTTTAAGTACACCAAGA+GGG | - | chr3_4:33674738-33674757 | None:intergenic | 35.0% |
| ! | TTTGCTTTAAGTACACCAAG+AGG | - | chr3_4:33674739-33674758 | None:intergenic | 35.0% |
| TTGGTGTACTTAAAGCAAAG+AGG | + | chr3_4:33674740-33674759 | Msa0498080:CDS | 35.0% | |
| AGAGGATATCATTTGAACCA+AGG | + | chr3_4:33674758-33674777 | Msa0498080:CDS | 35.0% | |
| ACTCCTAAGAACTCTACATT+AGG | - | chr3_4:33674871-33674890 | None:intergenic | 35.0% | |
| GTAGTTGCAGATACATCTTA+TGG | + | chr3_4:33674889-33674908 | Msa0498080:CDS | 35.0% | |
| ! | TTTCAGTTTTTAATCGCGCT+AGG | + | chr3_4:33675097-33675116 | Msa0498080:intron | 35.0% |
| AGATTATAGTGAACTGAGCA+GGG | - | chr3_4:33675203-33675222 | None:intergenic | 35.0% | |
| TAGATTATAGTGAACTGAGC+AGG | - | chr3_4:33675204-33675223 | None:intergenic | 35.0% | |
| CAGTTCACTATAATCTACAC+AGG | + | chr3_4:33675207-33675226 | Msa0498080:intron | 35.0% | |
| ATATGGTTCCATAGAACTAG+TGG | - | chr3_4:33675233-33675252 | None:intergenic | 35.0% | |
| TTTAGGCCTCACATTTCTTT+GGG | + | chr3_4:33675327-33675346 | Msa0498080:intron | 35.0% | |
| CTCATAGCATACACAGTAAA+GGG | - | chr3_4:33675357-33675376 | None:intergenic | 35.0% | |
| ! | ACATACGAGATATCTGAAGT+GGG | - | chr3_4:33675722-33675741 | None:intergenic | 35.0% |
| TACATACGAGATATCTGAAG+TGG | - | chr3_4:33675723-33675742 | None:intergenic | 35.0% | |
| AACATCGGATTCTATCCATT+AGG | - | chr3_4:33675773-33675792 | None:intergenic | 35.0% | |
| !!! | TCCGATGTTTTTTCTGAAGT+AGG | + | chr3_4:33675784-33675803 | Msa0498080:three_prime_UTR | 35.0% |
| GTGTAATAATCCACTTGTGT+TGG | + | chr3_4:33676215-33676234 | Msa0498080:three_prime_UTR | 35.0% | |
| AACTTTCCAGGAAAAAAGGG+AGG | - | chr3_4:33667806-33667825 | None:intergenic | 40.0% | |
| GGTGAGTTAGAAAACTTTCC+AGG | - | chr3_4:33667818-33667837 | None:intergenic | 40.0% | |
| GAATCGCGAATTTGTGAGAT+CGG | - | chr3_4:33667852-33667871 | None:intergenic | 40.0% | |
| ACAAATTCGCGATTCTGCAT+CGG | + | chr3_4:33667857-33667876 | Msa0498080:five_prime_UTR | 40.0% | |
| TTCAACCACTCTTACCTTAG+TGG | - | chr3_4:33667901-33667920 | None:intergenic | 40.0% | |
| AGTAACGCCAAATTAACCAG+AGG | + | chr3_4:33668075-33668094 | Msa0498080:CDS | 40.0% | |
| !! | ATACTTCTGGGATACGTATC+CGG | - | chr3_4:33668533-33668552 | None:intergenic | 40.0% |
| !! | ATACTTCTGGGATACGTATC+CGG | - | chr3_4:33668533-33668552 | None:intergenic | 40.0% |
| ! | ATTTAGGATACGATACGGCT+TGG | - | chr3_4:33668951-33668970 | None:intergenic | 40.0% |
| TGATAGAGATGCAGATTTCG+TGG | - | chr3_4:33669450-33669469 | None:intergenic | 40.0% | |
| ! | AATTAGAGCATCTCCAATGG+GGG | + | chr3_4:33669680-33669699 | Msa0498080:intron | 40.0% |
| GAAAAATTGAGTCCCCGTTA+AGG | + | chr3_4:33669754-33669773 | Msa0498080:intron | 40.0% | |
| TATAGTTGCCCGTTCCTTAA+CGG | - | chr3_4:33669771-33669790 | None:intergenic | 40.0% | |
| AAGGAACGGGCAACTATATA+AGG | + | chr3_4:33669773-33669792 | Msa0498080:intron | 40.0% | |
| TATATAAGGACTCTCTCTCC+TGG | + | chr3_4:33669787-33669806 | Msa0498080:intron | 40.0% | |
| ATATAAGGACTCTCTCTCCT+GGG | + | chr3_4:33669788-33669807 | Msa0498080:intron | 40.0% | |
| TAAGGACTCAATGACTCCAA+TGG | - | chr3_4:33670050-33670069 | None:intergenic | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | + | chr3_4:33670052-33670071 | Msa0498080:intron | 40.0% | |
| TAAATAAGTGATGTGCCACG+TGG | + | chr3_4:33670094-33670113 | Msa0498080:intron | 40.0% | |
| AAATAAGTGATGTGCCACGT+GGG | + | chr3_4:33670095-33670114 | Msa0498080:intron | 40.0% | |
| CCTAACAAGGACTCCTTAAA+TGG | - | chr3_4:33670123-33670142 | None:intergenic | 40.0% | |
| CCATTTAAGGAGTCCTTGTT+AGG | + | chr3_4:33670120-33670139 | Msa0498080:intron | 40.0% | |
| TTATGCTCGTTGAGAAATGG+GGG | + | chr3_4:33670473-33670492 | Msa0498080:intron | 40.0% | |
| CTGTTTGTAGCTCTTTGCTA+TGG | + | chr3_4:33670554-33670573 | Msa0498080:intron | 40.0% | |
| CCACCAATGACAATAACAGA+TGG | - | chr3_4:33670608-33670627 | None:intergenic | 40.0% | |
| CCATCTGTTATTGTCATTGG+TGG | + | chr3_4:33670605-33670624 | Msa0498080:CDS | 40.0% | |
| TCTGTTATTGTCATTGGTGG+TGG | + | chr3_4:33670608-33670627 | Msa0498080:CDS | 40.0% | |
| ACTTCAAGATGCTTCCTTTC+AGG | + | chr3_4:33670658-33670677 | Msa0498080:CDS | 40.0% | |
| CATTCAGCCAATCCCATTAA+CGG | - | chr3_4:33670811-33670830 | None:intergenic | 40.0% | |
| GATCTCGATTAGAAGATCGA+GGG | - | chr3_4:33670842-33670861 | None:intergenic | 40.0% | |
| AGATCTCGATTAGAAGATCG+AGG | - | chr3_4:33670843-33670862 | None:intergenic | 40.0% | |
| GACATTCAAAACAAGGAGGT+CGG | - | chr3_4:33671115-33671134 | None:intergenic | 40.0% | |
| CTCAGACATTCAAAACAAGG+AGG | - | chr3_4:33671119-33671138 | None:intergenic | 40.0% | |
| GAGCTCAGACATTCAAAACA+AGG | - | chr3_4:33671122-33671141 | None:intergenic | 40.0% | |
| !! | AAGAGCACTTTCTCTTGGTT+TGG | - | chr3_4:33671461-33671480 | None:intergenic | 40.0% |
| ATGTGGGATATGGCAGTTAT+TGG | + | chr3_4:33671681-33671700 | Msa0498080:intron | 40.0% | |
| AAACTAGCAAGTATCACCCA+GGG | - | chr3_4:33671977-33671996 | None:intergenic | 40.0% | |
| TAAACTAGCAAGTATCACCC+AGG | - | chr3_4:33671978-33671997 | None:intergenic | 40.0% | |
| !! | CCACTTCATGACTTGCATTT+TGG | - | chr3_4:33672172-33672191 | None:intergenic | 40.0% |
| CCAAAATGCAAGTCATGAAG+TGG | + | chr3_4:33672169-33672188 | Msa0498080:intron | 40.0% | |
| TCCTAAAAAGGAGGGAGATA+GGG | - | chr3_4:33672324-33672343 | None:intergenic | 40.0% | |
| TTCCTAAAAAGGAGGGAGAT+AGG | - | chr3_4:33672325-33672344 | None:intergenic | 40.0% | |
| GTGCATGATTCCTAAAAAGG+AGG | - | chr3_4:33672333-33672352 | None:intergenic | 40.0% | |
| GCTGTGCATGATTCCTAAAA+AGG | - | chr3_4:33672336-33672355 | None:intergenic | 40.0% | |
| GCCTCAATGATGAAATGAAG+TGG | + | chr3_4:33672490-33672509 | Msa0498080:intron | 40.0% | |
| AGGTTGTTCTCTTAGAGTCT+AGG | + | chr3_4:33672664-33672683 | Msa0498080:intron | 40.0% | |
| GGTTGTTCTCTTAGAGTCTA+GGG | + | chr3_4:33672665-33672684 | Msa0498080:intron | 40.0% | |
| TTAGAGTCTAGGGAAAGACT+TGG | + | chr3_4:33672675-33672694 | Msa0498080:CDS | 40.0% | |
| AACTCCATGCAACCTTAAAC+AGG | - | chr3_4:33672858-33672877 | None:intergenic | 40.0% | |
| TGTGCTATACGACCATGATT+TGG | + | chr3_4:33672952-33672971 | Msa0498080:CDS | 40.0% | |
| ! | AAGGCATCACTATAAGGTAG+AGG | - | chr3_4:33673338-33673357 | None:intergenic | 40.0% |
| !! | AGTGCAAAGGCATCACTATA+AGG | - | chr3_4:33673344-33673363 | None:intergenic | 40.0% |
| ATGCCTTTGCACTACATTTC+TGG | + | chr3_4:33673351-33673370 | Msa0498080:intron | 40.0% | |
| TTACTGTGGAAATGCATAGC+AGG | - | chr3_4:33673406-33673425 | None:intergenic | 40.0% | |
| AATTGAAAGACCACGCTGTA+TGG | - | chr3_4:33673559-33673578 | None:intergenic | 40.0% | |
| GTGGTATTTATGCAGAATGG+AGG | + | chr3_4:33673727-33673746 | Msa0498080:CDS | 40.0% | |
| AAATTAAGGACGAGAAGGTG+GGG | - | chr3_4:33673863-33673882 | None:intergenic | 40.0% | |
| GTAAATTAAGGACGAGAAGG+TGG | - | chr3_4:33673865-33673884 | None:intergenic | 40.0% | |
| !! | CTCTCTTTGGTGTTACATAC+AGG | + | chr3_4:33673900-33673919 | Msa0498080:intron | 40.0% |
| ATATAGAGAGACCAGGTTAG+GGG | + | chr3_4:33674063-33674082 | Msa0498080:intron | 40.0% | |
| ACCAGGTTAGGGGATAAAAA+TGG | + | chr3_4:33674073-33674092 | Msa0498080:intron | 40.0% | |
| !! | TCCATTTTTATCCCCTAACC+TGG | - | chr3_4:33674077-33674096 | None:intergenic | 40.0% |
| TCAAACAAATCCAGATGGGA+AGG | + | chr3_4:33674171-33674190 | Msa0498080:intron | 40.0% | |
| CAAACAAATCCAGATGGGAA+GGG | + | chr3_4:33674172-33674191 | Msa0498080:intron | 40.0% | |
| AATATCAAGACCCTTGGCTA+GGG | - | chr3_4:33674536-33674555 | None:intergenic | 40.0% | |
| ACTATATCTACCTGTGTCCT+AGG | - | chr3_4:33674561-33674580 | None:intergenic | 40.0% | |
| TAATGGAGTAAAAGTGACCG+TGG | + | chr3_4:33674669-33674688 | Msa0498080:CDS | 40.0% | |
| TAAAAGTGACCGTGGAAAGT+GGG | + | chr3_4:33674677-33674696 | Msa0498080:CDS | 40.0% | |
| TGGCCTAATGTAGAGTTCTT+AGG | + | chr3_4:33674865-33674884 | Msa0498080:CDS | 40.0% | |
| CTACTTCCTTAATCTCCACA+AGG | + | chr3_4:33674918-33674937 | Msa0498080:CDS | 40.0% | |
| AAGGCATGTAAACAAGGACA+GGG | - | chr3_4:33674954-33674973 | None:intergenic | 40.0% | |
| ! | TCCTTGTTTACATGCCTTCT+GGG | + | chr3_4:33674956-33674975 | Msa0498080:CDS | 40.0% |
| TGAAAACCTCACCTACCTTT+AGG | + | chr3_4:33675310-33675329 | Msa0498080:intron | 40.0% | |
| CAAAGAAATGTGAGGCCTAA+AGG | - | chr3_4:33675328-33675347 | None:intergenic | 40.0% | |
| CTTTAGGCCTCACATTTCTT+TGG | + | chr3_4:33675326-33675345 | Msa0498080:intron | 40.0% | |
| CCTCATAGCATACACAGTAA+AGG | - | chr3_4:33675358-33675377 | None:intergenic | 40.0% | |
| CCTTTACTGTGTATGCTATG+AGG | + | chr3_4:33675355-33675374 | Msa0498080:intron | 40.0% | |
| AGATTCAGTACCTTGTGTCT+CGG | + | chr3_4:33675433-33675452 | Msa0498080:intron | 40.0% | |
| GGCTCGGATATAAATTCACT+GGG | + | chr3_4:33675459-33675478 | Msa0498080:CDS | 40.0% | |
| CGAAGAACAGGTTATCTACT+GGG | - | chr3_4:33675542-33675561 | None:intergenic | 40.0% | |
| TAGATAACCTGTTCTTCGCA+GGG | + | chr3_4:33675544-33675563 | Msa0498080:CDS | 40.0% | |
| ! | TATCTGAAGTGGGATAGTCA+AGG | - | chr3_4:33675712-33675731 | None:intergenic | 40.0% |
| !! | TTCTGAAGTAGGATTTGCCA+TGG | + | chr3_4:33675795-33675814 | Msa0498080:three_prime_UTR | 40.0% |
| ! | GTGAGATCGGAAGAGGATTT+TGG | - | chr3_4:33667839-33667858 | None:intergenic | 45.0% |
| CGAATTTGTGAGATCGGAAG+AGG | - | chr3_4:33667846-33667865 | None:intergenic | 45.0% | |
| AGAAACGGAGCTGTATGAAC+TGG | + | chr3_4:33667932-33667951 | Msa0498080:five_prime_UTR | 45.0% | |
| GCTTCATAGGTGTGGTGTAT+AGG | - | chr3_4:33668441-33668460 | None:intergenic | 45.0% | |
| TATCCGATACGTATCCGACA+CGG | - | chr3_4:33668490-33668509 | None:intergenic | 45.0% | |
| !! | TACTTCTGGGATACGTATCC+GGG | - | chr3_4:33668532-33668551 | None:intergenic | 45.0% |
| GGATACGTTAAGGATACTCC+CGG | + | chr3_4:33668602-33668621 | Msa0498080:intron | 45.0% | |
| !! | TACTTCTGGGATACGTATCC+GGG | - | chr3_4:33668532-33668551 | None:intergenic | 45.0% |
| CCTGCACTATGATGATACCA+AGG | - | chr3_4:33668771-33668790 | None:intergenic | 45.0% | |
| CCTTGGTATCATCATAGTGC+AGG | + | chr3_4:33668768-33668787 | Msa0498080:intron | 45.0% | |
| ATACGGGTACGATACGATAC+GGG | - | chr3_4:33668999-33669018 | None:intergenic | 45.0% | |
| GATACGGGTACGATACGATA+CGG | - | chr3_4:33669000-33669019 | None:intergenic | 45.0% | |
| ! | ATTAGAGCATCTCCAATGGG+GGG | + | chr3_4:33669681-33669700 | Msa0498080:intron | 45.0% |
| GTTAAGTAAAGACCCCCCAT+TGG | - | chr3_4:33669696-33669715 | None:intergenic | 45.0% | |
| TGGGGGGTCTTTACTTAACA+AGG | + | chr3_4:33669697-33669716 | Msa0498080:intron | 45.0% | |
| ATTGAGTCCCCGTTAAGGAA+CGG | + | chr3_4:33669759-33669778 | Msa0498080:intron | 45.0% | |
| ATAGTTGCCCGTTCCTTAAC+GGG | - | chr3_4:33669770-33669789 | None:intergenic | 45.0% | |
| TCTCTCTCCTGGGTAACTAA+TGG | + | chr3_4:33669798-33669817 | Msa0498080:intron | 45.0% | |
| CTCTCTCCTGGGTAACTAAT+GGG | + | chr3_4:33669799-33669818 | Msa0498080:intron | 45.0% | |
| AATAAGTGATGTGCCACGTG+GGG | + | chr3_4:33670096-33670115 | Msa0498080:intron | 45.0% | |
| !! | TATTGTCATTGGTGGTGGCA+TGG | + | chr3_4:33670613-33670632 | Msa0498080:CDS | 45.0% |
| GGGAAAGAGAGAGAGACATT+AGG | - | chr3_4:33671083-33671102 | None:intergenic | 45.0% | |
| !! | TGGTTTGGTTTAGACCCTAG+AGG | - | chr3_4:33671446-33671465 | None:intergenic | 45.0% |
| ACAGTAGATTGAGCCAAAGC+AGG | - | chr3_4:33671921-33671940 | None:intergenic | 45.0% | |
| TATAATTCGGGAAGAGTCCC+TGG | + | chr3_4:33671957-33671976 | Msa0498080:intron | 45.0% | |
| ATAATTCGGGAAGAGTCCCT+GGG | + | chr3_4:33671958-33671977 | Msa0498080:intron | 45.0% | |
| TAAAAAGGAGGGAGATAGGG+GGG | - | chr3_4:33672321-33672340 | None:intergenic | 45.0% | |
| CTAAAAAGGAGGGAGATAGG+GGG | - | chr3_4:33672322-33672341 | None:intergenic | 45.0% | |
| CCTAAAAAGGAGGGAGATAG+GGG | - | chr3_4:33672323-33672342 | None:intergenic | 45.0% | |
| AAGGTTGCATGGAGTTTGCA+AGG | + | chr3_4:33672862-33672881 | Msa0498080:intron | 45.0% | |
| AATCCACTTGCTTCCGTGAT+TGG | + | chr3_4:33672887-33672906 | Msa0498080:CDS | 45.0% | |
| ATCCACTTGCTTCCGTGATT+GGG | + | chr3_4:33672888-33672907 | Msa0498080:CDS | 45.0% | |
| TTACCCCTTTACCGTACTAG+TGG | + | chr3_4:33672920-33672939 | Msa0498080:CDS | 45.0% | |
| TACCCCTTTACCGTACTAGT+GGG | + | chr3_4:33672921-33672940 | Msa0498080:CDS | 45.0% | |
| ATCCCCACTAGTACGGTAAA+GGG | - | chr3_4:33672927-33672946 | None:intergenic | 45.0% | |
| TATCCCCACTAGTACGGTAA+AGG | - | chr3_4:33672928-33672947 | None:intergenic | 45.0% | |
| CAGAGTTATCCCCACTAGTA+CGG | - | chr3_4:33672934-33672953 | None:intergenic | 45.0% | |
| GAATCAAGTTCCCCAGGAAT+TGG | + | chr3_4:33673189-33673208 | Msa0498080:CDS | 45.0% | |
| GTAGAGGAATCCAACTACGT+TGG | - | chr3_4:33673322-33673341 | None:intergenic | 45.0% | |
| GAAGATATGTCCATACAGCG+TGG | + | chr3_4:33673546-33673565 | Msa0498080:CDS | 45.0% | |
| ! | TTGCCCATAAGGTACTTCAG+TGG | + | chr3_4:33673708-33673727 | Msa0498080:CDS | 45.0% |
| ATTTATGCAGAATGGAGGGC+TGG | + | chr3_4:33673732-33673751 | Msa0498080:CDS | 45.0% | |
| TGTAAAGTCGTCTCATAGCC+AGG | + | chr3_4:33673949-33673968 | Msa0498080:intron | 45.0% | |
| ATGTTGAAGACTCATGCACC+TGG | - | chr3_4:33673970-33673989 | None:intergenic | 45.0% | |
| ! | TCTTTTACACCCTTCCCATC+TGG | - | chr3_4:33674184-33674203 | None:intergenic | 45.0% |
| TCATGGCAGGTCTATGCAAA+GGG | - | chr3_4:33674303-33674322 | None:intergenic | 45.0% | |
| TTCATGGCAGGTCTATGCAA+AGG | - | chr3_4:33674304-33674323 | None:intergenic | 45.0% | |
| GAATATCAAGACCCTTGGCT+AGG | - | chr3_4:33674537-33674556 | None:intergenic | 45.0% | |
| TAGGCGAATATCAAGACCCT+TGG | - | chr3_4:33674542-33674561 | None:intergenic | 45.0% | |
| AAGGGTCTTGATATTCGCCT+AGG | + | chr3_4:33674541-33674560 | Msa0498080:CDS | 45.0% | |
| TTGATATTCGCCTAGGACAC+AGG | + | chr3_4:33674548-33674567 | Msa0498080:CDS | 45.0% | |
| GTAAAAGTGACCGTGGAAAG+TGG | + | chr3_4:33674676-33674695 | Msa0498080:CDS | 45.0% | |
| ! | GAAGGCATGTAAACAAGGAC+AGG | - | chr3_4:33674955-33674974 | None:intergenic | 45.0% |
| ! | GTCCTTGTTTACATGCCTTC+TGG | + | chr3_4:33674955-33674974 | Msa0498080:CDS | 45.0% |
| TTGTTTACATGCCTTCTGGG+CGG | + | chr3_4:33674959-33674978 | Msa0498080:CDS | 45.0% | |
| AAATAGAGTGGTTACCGGTG+AGG | - | chr3_4:33675070-33675089 | None:intergenic | 45.0% | |
| !! | TACACAGGCCACTAGTTCTA+TGG | + | chr3_4:33675222-33675241 | Msa0498080:intron | 45.0% |
| GAAATGTGAGGCCTAAAGGT+AGG | - | chr3_4:33675324-33675343 | None:intergenic | 45.0% | |
| !! | CACAAGGTACTGAATCTGCA+TGG | - | chr3_4:33675430-33675449 | None:intergenic | 45.0% |
| GGGCTCGGATATAAATTCAC+TGG | + | chr3_4:33675458-33675477 | Msa0498080:CDS | 45.0% | |
| AACCACATGAACTGTACGAG+AGG | + | chr3_4:33675508-33675527 | Msa0498080:CDS | 45.0% | |
| GCGAAGAACAGGTTATCTAC+TGG | - | chr3_4:33675543-33675562 | None:intergenic | 45.0% | |
| GTAGATAACCTGTTCTTCGC+AGG | + | chr3_4:33675543-33675562 | Msa0498080:CDS | 45.0% | |
| AGATAACCTGTTCTTCGCAG+GGG | + | chr3_4:33675545-33675564 | Msa0498080:CDS | 45.0% | |
| GCAACAAGTATGAGCTATCC+AGG | + | chr3_4:33675570-33675589 | Msa0498080:CDS | 45.0% | |
| ! | GATTTGTTTCAGCCGGTGAT+GGG | + | chr3_4:33675675-33675694 | Msa0498080:CDS | 45.0% |
| TCTTTGGTCACCACTCCTAA+TGG | + | chr3_4:33675755-33675774 | Msa0498080:three_prime_UTR | 45.0% | |
| CGGATTCTATCCATTAGGAG+TGG | - | chr3_4:33675768-33675787 | None:intergenic | 45.0% | |
| TCAATAGTGTGCAGAAGCCA+TGG | - | chr3_4:33675815-33675834 | None:intergenic | 45.0% | |
| !! | TATATAATTAATGTATTTAT+TGG | - | chr3_4:33668255-33668274 | None:intergenic | 5.0% |
| !! | AAAAATTAAATTAAATCATT+CGG | - | chr3_4:33668556-33668575 | None:intergenic | 5.0% |
| !! | AAAAATTAAATTAAATCATT+CGG | - | chr3_4:33668556-33668575 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTTTTAATTGTT+TGG | + | chr3_4:33672639-33672658 | Msa0498080:intron | 5.0% |
| CGGAGCTGTATGAACTGGTT+CGG | + | chr3_4:33667937-33667956 | Msa0498080:five_prime_UTR | 50.0% | |
| ! | GGAGCTGTATGAACTGGTTC+GGG | + | chr3_4:33667938-33667957 | Msa0498080:five_prime_UTR | 50.0% |
| TACACCACACCTATGAAGCC+CGG | + | chr3_4:33668442-33668461 | Msa0498080:intron | 50.0% | |
| ! | TTGGAGTATCCGGGCTTCAT+AGG | - | chr3_4:33668454-33668473 | None:intergenic | 50.0% |
| GAAGCCCGGATACTCCAAAA+TGG | + | chr3_4:33668456-33668475 | Msa0498080:intron | 50.0% | |
| !!! | GGCACCATTTTGGAGTATCC+GGG | - | chr3_4:33668463-33668482 | None:intergenic | 50.0% |
| !!! | CGGCACCATTTTGGAGTATC+CGG | - | chr3_4:33668464-33668483 | None:intergenic | 50.0% |
| ATACGTATCCGACACGGGTA+CGG | - | chr3_4:33668484-33668503 | None:intergenic | 50.0% | |
| TACCCGTGTCGGATACGTAT+CGG | + | chr3_4:33668484-33668503 | Msa0498080:intron | 50.0% | |
| ATCCGATACGTATCCGACAC+GGG | - | chr3_4:33668489-33668508 | None:intergenic | 50.0% | |
| TATCGGATACCGATACTCCG+CGG | + | chr3_4:33668501-33668520 | Msa0498080:intron | 50.0% | |
| ACCCGTATCCGTATCCGTAT+CGG | + | chr3_4:33669011-33669030 | Msa0498080:intron | 50.0% | |
| ATGAAGCCCCGATACGGATA+CGG | - | chr3_4:33669022-33669041 | None:intergenic | 50.0% | |
| ACAAGGACCACTCCTCGTTA+AGG | + | chr3_4:33669714-33669733 | Msa0498080:intron | 50.0% | |
| TTGAGTCCCCGTTAAGGAAC+GGG | + | chr3_4:33669760-33669779 | Msa0498080:intron | 50.0% | |
| TAGTTGCCCGTTCCTTAACG+GGG | - | chr3_4:33669769-33669788 | None:intergenic | 50.0% | |
| TGGCAATGTTAGCAGTGTGC+AGG | + | chr3_4:33670574-33670593 | Msa0498080:CDS | 50.0% | |
| ATGTTAGCAGTGTGCAGGAG+AGG | + | chr3_4:33670579-33670598 | Msa0498080:CDS | 50.0% | |
| AAGGAGGTCGGAGAAGGTTA+GGG | - | chr3_4:33671103-33671122 | None:intergenic | 50.0% | |
| CAAAACAAGGAGGTCGGAGA+AGG | - | chr3_4:33671109-33671128 | None:intergenic | 50.0% | |
| ! | CCCCTATCTCCCTCCTTTTT+AGG | + | chr3_4:33672320-33672339 | Msa0498080:intron | 50.0% |
| GAGTCTAGGGAAAGACTTGG+TGG | + | chr3_4:33672678-33672697 | Msa0498080:CDS | 50.0% | |
| ACCCCTTTACCGTACTAGTG+GGG | + | chr3_4:33672922-33672941 | Msa0498080:CDS | 50.0% | |
| TCCCCACTAGTACGGTAAAG+GGG | - | chr3_4:33672926-33672945 | None:intergenic | 50.0% | |
| GAATGGGAATCAAGTTCCCC+AGG | + | chr3_4:33673183-33673202 | Msa0498080:CDS | 50.0% | |
| !!! | TTTTGGGGTGCCAACGTAGT+TGG | + | chr3_4:33673309-33673328 | Msa0498080:intron | 50.0% |
| TGATTTCCACCCTTGACTGC+AGG | + | chr3_4:33673675-33673694 | Msa0498080:intron | 50.0% | |
| TTCACTGAATGGTTGGGACC+AGG | + | chr3_4:33673778-33673797 | Msa0498080:CDS | 50.0% | |
| !! | TGACAGGAAGTACTTCTCCC+TGG | + | chr3_4:33674466-33674485 | Msa0498080:intron | 50.0% |
| ! | TGGTCACGGTCTTATGGTCA+GGG | + | chr3_4:33674489-33674508 | Msa0498080:CDS | 50.0% |
| GCTATTGTTGCTGTCCCTCT+TGG | + | chr3_4:33674721-33674740 | Msa0498080:CDS | 50.0% | |
| AAGCTGCCATCGCTGAACTT+GGG | + | chr3_4:33674797-33674816 | Msa0498080:CDS | 50.0% | |
| ! | GTGCAGCCTTGTGGAGATTA+AGG | - | chr3_4:33674927-33674946 | None:intergenic | 50.0% |
| ! | GCCCAGAAGGCATGTAAACA+AGG | - | chr3_4:33674960-33674979 | None:intergenic | 50.0% |
| CCTTCCTAATGCTTCCTCAC+CGG | + | chr3_4:33675053-33675072 | Msa0498080:CDS | 50.0% | |
| !! | GTTACCGGTGAGGAAGCATT+AGG | - | chr3_4:33675060-33675079 | None:intergenic | 50.0% |
| AACTGAGCAGGGTGAACTAG+AGG | - | chr3_4:33675192-33675211 | None:intergenic | 50.0% | |
| GGTCAGCCCAAAGAAATGTG+AGG | - | chr3_4:33675336-33675355 | None:intergenic | 50.0% | |
| TTCAGTACCTTGTGTCTCGG+TGG | + | chr3_4:33675436-33675455 | Msa0498080:CDS | 50.0% | |
| TCAGTACCTTGTGTCTCGGT+GGG | + | chr3_4:33675437-33675456 | Msa0498080:CDS | 50.0% | |
| AGCCTCTCGTACAGTTCATG+TGG | - | chr3_4:33675513-33675532 | None:intergenic | 50.0% | |
| AGCTATCCAGGATCTGTCCA+TGG | + | chr3_4:33675582-33675601 | Msa0498080:CDS | 50.0% | |
| AATGCACCATGGACAGATCC+TGG | - | chr3_4:33675591-33675610 | None:intergenic | 50.0% | |
| TGCATTCTCCACCGGAATGA+TGG | + | chr3_4:33675605-33675624 | Msa0498080:CDS | 50.0% | |
| ATTCTCCACCGGAATGATGG+CGG | + | chr3_4:33675608-33675627 | Msa0498080:CDS | 50.0% | |
| ATCTTCAGCCGCCATCATTC+CGG | - | chr3_4:33675619-33675638 | None:intergenic | 50.0% | |
| ! | CGAGCTGGATTTGTTTCAGC+CGG | + | chr3_4:33675668-33675687 | Msa0498080:CDS | 50.0% |
| ! | GGATTTGTTTCAGCCGGTGA+TGG | + | chr3_4:33675674-33675693 | Msa0498080:CDS | 50.0% |
| CTGAAGTGGGATAGTCAAGG+AGG | - | chr3_4:33675709-33675728 | None:intergenic | 50.0% | |
| GGCTGTGCACCTCTATAGTT+TGG | + | chr3_4:33675959-33675978 | Msa0498080:three_prime_UTR | 50.0% | |
| GTATCCGGGCTTCATAGGTG+TGG | - | chr3_4:33668449-33668468 | None:intergenic | 55.0% | |
| ! | ACACGGGTACGGCACCATTT+TGG | - | chr3_4:33668473-33668492 | None:intergenic | 55.0% |
| !! | AAATGGTGCCGTACCCGTGT+CGG | + | chr3_4:33668473-33668492 | Msa0498080:intron | 55.0% |
| !! | TACGTATCCGGGAGTATCCG+CGG | - | chr3_4:33668521-33668540 | None:intergenic | 55.0% |
| CCCGATACGGATACGGATAC+GGG | - | chr3_4:33669015-33669034 | None:intergenic | 55.0% | |
| CCCGTATCCGTATCCGTATC+GGG | + | chr3_4:33669012-33669031 | Msa0498080:intron | 55.0% | |
| CCCCGATACGGATACGGATA+CGG | - | chr3_4:33669016-33669035 | None:intergenic | 55.0% | |
| CCGTATCCGTATCCGTATCG+GGG | + | chr3_4:33669013-33669032 | Msa0498080:intron | 55.0% | |
| ! | GGTGCTATGAAGCCCCGATA+CGG | - | chr3_4:33669028-33669047 | None:intergenic | 55.0% |
| CCAATGGAGGGTCCTTAACG+AGG | - | chr3_4:33669729-33669748 | None:intergenic | 55.0% | |
| CCTCGTTAAGGACCCTCCAT+TGG | + | chr3_4:33669726-33669745 | Msa0498080:intron | 55.0% | |
| CGTTAAGGACCCTCCATTGG+AGG | + | chr3_4:33669729-33669748 | Msa0498080:intron | 55.0% | |
| GTGGGACCCATTAGTTACCC+AGG | - | chr3_4:33669808-33669827 | None:intergenic | 55.0% | |
| TGCCACGTGGGGTCCATTTA+AGG | + | chr3_4:33670107-33670126 | Msa0498080:intron | 55.0% | |
| CTCCTTAAATGGACCCCACG+TGG | - | chr3_4:33670112-33670131 | None:intergenic | 55.0% | |
| !! | TCATTGGTGGTGGCATGGCT+GGG | + | chr3_4:33670618-33670637 | Msa0498080:CDS | 55.0% |
| CAAGGAGGTCGGAGAAGGTT+AGG | - | chr3_4:33671104-33671123 | None:intergenic | 55.0% | |
| CTCCCAATCACGGAAGCAAG+TGG | - | chr3_4:33672893-33672912 | None:intergenic | 55.0% | |
| CACTTGCTTCCGTGATTGGG+AGG | + | chr3_4:33672891-33672910 | Msa0498080:CDS | 55.0% | |
| TAACCCCAGCCTCCCAATCA+CGG | - | chr3_4:33672903-33672922 | None:intergenic | 55.0% | |
| TTCCACCCTTGACTGCAGGT+TGG | + | chr3_4:33673679-33673698 | Msa0498080:intron | 55.0% | |
| ! | ACCCTTGACTGCAGGTTGGA+GGG | + | chr3_4:33673683-33673702 | Msa0498080:intron | 55.0% |
| !! | CAGGAAGTACTTCTCCCTGG+TGG | + | chr3_4:33674469-33674488 | Msa0498080:intron | 55.0% |
| GTACTTCTCCCTGGTGGTCA+CGG | + | chr3_4:33674475-33674494 | Msa0498080:CDS | 55.0% | |
| CCATAAGACCGTGACCACCA+GGG | - | chr3_4:33674486-33674505 | None:intergenic | 55.0% | |
| ACCATAAGACCGTGACCACC+AGG | - | chr3_4:33674487-33674506 | None:intergenic | 55.0% | |
| ! | GTGGTCACGGTCTTATGGTC+AGG | + | chr3_4:33674488-33674507 | Msa0498080:CDS | 55.0% |
| ! | GGTCACGGTCTTATGGTCAG+GGG | + | chr3_4:33674490-33674509 | Msa0498080:CDS | 55.0% |
| TTGAACCAAGGCTCCCAGAC+TGG | + | chr3_4:33674770-33674789 | Msa0498080:CDS | 55.0% | |
| TGGCAGCTTCCTTCCAGTCT+GGG | - | chr3_4:33674786-33674805 | None:intergenic | 55.0% | |
| ATGGCAGCTTCCTTCCAGTC+TGG | - | chr3_4:33674787-33674806 | None:intergenic | 55.0% | |
| GAAGCTGCCATCGCTGAACT+TGG | + | chr3_4:33674796-33674815 | Msa0498080:CDS | 55.0% | |
| AGCTGCCATCGCTGAACTTG+GGG | + | chr3_4:33674798-33674817 | Msa0498080:CDS | 55.0% | |
| TCCAACCCCAAGTTCAGCGA+TGG | - | chr3_4:33674806-33674825 | None:intergenic | 55.0% | |
| !! | CCGGTGAGGAAGCATTAGGA+AGG | - | chr3_4:33675056-33675075 | None:intergenic | 55.0% |
| GTGAGGCCTAAAGGTAGGTG+AGG | - | chr3_4:33675319-33675338 | None:intergenic | 55.0% | |
| CAGTACCTTGTGTCTCGGTG+GGG | + | chr3_4:33675438-33675457 | Msa0498080:CDS | 55.0% | |
| TTGCTTCCCCTGCGAAGAAC+AGG | - | chr3_4:33675554-33675573 | None:intergenic | 55.0% | |
| GTCCATGGTGCATTCTCCAC+CGG | + | chr3_4:33675597-33675616 | Msa0498080:CDS | 55.0% | |
| TTCCGGTGGAGAATGCACCA+TGG | - | chr3_4:33675602-33675621 | None:intergenic | 55.0% | |
| !! | TGATGGCGGCTGAAGATTGC+AGG | + | chr3_4:33675622-33675641 | Msa0498080:CDS | 55.0% |
| AGATTGCAGGATGCGTGTGC+TGG | + | chr3_4:33675635-33675654 | Msa0498080:CDS | 55.0% | |
| ATGCGTGTGCTGGAGCGATA+TGG | + | chr3_4:33675645-33675664 | Msa0498080:CDS | 55.0% | |
| !! | TCAGCCGGTGATGGGAGAAA+TGG | + | chr3_4:33675683-33675702 | Msa0498080:CDS | 55.0% |
| GAGGCCATTTCTCCCATCAC+CGG | - | chr3_4:33675690-33675709 | None:intergenic | 55.0% | |
| !! | CGGGAGTATCCGCGGAGTAT+CGG | - | chr3_4:33668513-33668532 | None:intergenic | 60.0% |
| CGATACTCCGCGGATACTCC+CGG | + | chr3_4:33668511-33668530 | Msa0498080:intron | 60.0% | |
| GGAGGGTCCTTAACGAGGAG+TGG | - | chr3_4:33669724-33669743 | None:intergenic | 60.0% | |
| !! | GTCATTGGTGGTGGCATGGC+TGG | + | chr3_4:33670617-33670636 | Msa0498080:CDS | 60.0% |
| TGCTTCCGTGATTGGGAGGC+TGG | + | chr3_4:33672895-33672914 | Msa0498080:CDS | 60.0% | |
| GCTTCCGTGATTGGGAGGCT+GGG | + | chr3_4:33672896-33672915 | Msa0498080:CDS | 60.0% | |
| CTTCCGTGATTGGGAGGCTG+GGG | + | chr3_4:33672897-33672916 | Msa0498080:CDS | 60.0% | |
| CTCCAACCTGCAGTCAAGGG+TGG | - | chr3_4:33673684-33673703 | None:intergenic | 60.0% | |
| ! | CACCCTTGACTGCAGGTTGG+AGG | + | chr3_4:33673682-33673701 | Msa0498080:intron | 60.0% |
| CCCCTCCAACCTGCAGTCAA+GGG | - | chr3_4:33673687-33673706 | None:intergenic | 60.0% | |
| ! | CCCTTGACTGCAGGTTGGAG+GGG | + | chr3_4:33673684-33673703 | Msa0498080:intron | 60.0% |
| GTTGGAGGGGCTTGCCCATA+AGG | + | chr3_4:33673697-33673716 | Msa0498080:CDS | 60.0% | |
| AAGGACGAGAAGGTGGGGCA+GGG | - | chr3_4:33673858-33673877 | None:intergenic | 60.0% | |
| TAAGGACGAGAAGGTGGGGC+AGG | - | chr3_4:33673859-33673878 | None:intergenic | 60.0% | |
| CCCTGGTGGTCACGGTCTTA+TGG | + | chr3_4:33674483-33674502 | Msa0498080:CDS | 60.0% | |
| ACCAAGGCTCCCAGACTGGA+AGG | + | chr3_4:33674774-33674793 | Msa0498080:CDS | 60.0% | |
| TCCTTCCAGTCTGGGAGCCT+TGG | - | chr3_4:33674778-33674797 | None:intergenic | 60.0% | |
| GCCATCGCTGAACTTGGGGT+TGG | + | chr3_4:33674802-33674821 | Msa0498080:CDS | 60.0% | |
| TCTTTGGCAAGCCGCCCAGA+AGG | - | chr3_4:33674973-33674992 | None:intergenic | 60.0% | |
| TTCAGCCGCCATCATTCCGG+TGG | - | chr3_4:33675616-33675635 | None:intergenic | 60.0% | |
| GCCCCTCCAACCTGCAGTCA+AGG | - | chr3_4:33673688-33673707 | None:intergenic | 65.0% | |
| AGGACGAGAAGGTGGGGCAG+GGG | - | chr3_4:33673857-33673876 | None:intergenic | 65.0% | |
| CAGGGTGACGTGCAGCCTTG+TGG | - | chr3_4:33674936-33674955 | None:intergenic | 65.0% | |
| CCTTGTGTCTCGGTGGGGCT+CGG | + | chr3_4:33675443-33675462 | Msa0498080:CDS | 65.0% | |
| GCTGGAGCGATATGGCGAGC+TGG | + | chr3_4:33675653-33675672 | Msa0498080:CDS | 65.0% | |
| GGACGAGAAGGTGGGGCAGG+GGG | - | chr3_4:33673856-33673875 | None:intergenic | 70.0% | |
| CCGAGCCCCACCGAGACACA+AGG | - | chr3_4:33675446-33675465 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 33667744 | 33676238 | 33667744 | ID=Msa0498080;Name=Msa0498080 |
| chr3_4 | mRNA | 33667744 | 33676238 | 33667744 | ID=Msa0498080-mRNA-1;Parent=Msa0498080;Name=Msa0498080-mRNA-1;_AED=0.13;_eAED=0.13;_QI=313|1|1|1|1|1|10|495|490 |
| chr3_4 | exon | 33667744 | 33668096 | 33667744 | ID=Msa0498080-mRNA-1:exon:7159;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33670564 | 33670679 | 33670564 | ID=Msa0498080-mRNA-1:exon:7160;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33672666 | 33672754 | 33672666 | ID=Msa0498080-mRNA-1:exon:7161;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33672865 | 33672978 | 33672865 | ID=Msa0498080-mRNA-1:exon:7162;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33673165 | 33673252 | 33673165 | ID=Msa0498080-mRNA-1:exon:7163;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33673519 | 33673604 | 33673519 | ID=Msa0498080-mRNA-1:exon:7164;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33673697 | 33673799 | 33673697 | ID=Msa0498080-mRNA-1:exon:7165;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33674472 | 33674569 | 33674472 | ID=Msa0498080-mRNA-1:exon:7166;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33674645 | 33675074 | 33674645 | ID=Msa0498080-mRNA-1:exon:7167;Parent=Msa0498080-mRNA-1 |
| chr3_4 | exon | 33675435 | 33676238 | 33675435 | ID=Msa0498080-mRNA-1:exon:7168;Parent=Msa0498080-mRNA-1 |
| chr3_4 | five_prime_UTR | 33667744 | 33668056 | 33667744 | ID=Msa0498080-mRNA-1:five_prime_utr;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33668057 | 33668096 | 33668057 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33670564 | 33670679 | 33670564 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33672666 | 33672754 | 33672666 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33672865 | 33672978 | 33672865 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33673165 | 33673252 | 33673165 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33673519 | 33673604 | 33673519 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33673697 | 33673799 | 33673697 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33674472 | 33674569 | 33674472 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33674645 | 33675074 | 33674645 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | CDS | 33675435 | 33675743 | 33675435 | ID=Msa0498080-mRNA-1:cds;Parent=Msa0498080-mRNA-1 |
| chr3_4 | three_prime_UTR | 33675744 | 33676238 | 33675744 | ID=Msa0498080-mRNA-1:three_prime_utr;Parent=Msa0498080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
