Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338660 | XP_003597225.2 | 97.600 | 500 | 7 | 2 | 1 | 498 | 1 | 497 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0263510 | Msa0338660 | 0.992311 | 1.557421e-192 | -8.615850e-47 |
| Msa0338660 | Msa0498080 | 0.818764 | 1.652903e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338660 | MtrunA17_Chr2g0326551 | 96.634 | 505 | 7 | 3 | 1 | 498 | 1 | 502 | 0.0 | 998 |
| Msa0338660 | MtrunA17_Chr4g0029221 | 58.161 | 533 | 176 | 13 | 1 | 498 | 1 | 521 | 0.0 | 541 |
| Msa0338660 | MtrunA17_Chr1g0181371 | 44.792 | 480 | 230 | 13 | 25 | 499 | 46 | 495 | 2.01e-123 | 370 |
| Msa0338660 | MtrunA17_Chr3g0120281 | 45.308 | 373 | 184 | 10 | 89 | 446 | 71 | 438 | 2.19e-97 | 302 |
| Msa0338660 | MtrunA17_Chr2g0286611 | 33.424 | 368 | 207 | 8 | 95 | 447 | 61 | 405 | 1.84e-59 | 201 |
| Msa0338660 | MtrunA17_Chr7g0246271 | 39.412 | 170 | 88 | 4 | 247 | 414 | 45 | 201 | 6.04e-30 | 116 |
| Msa0338660 | MtrunA17_Chr7g0246251 | 32.828 | 198 | 93 | 4 | 265 | 434 | 1 | 186 | 1.43e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338660 | AT5G60580.1 | 52.654 | 471 | 191 | 14 | 24 | 488 | 43 | 487 | 2.55e-136 | 403 |
| Msa0338660 | AT5G60580.3 | 52.654 | 471 | 191 | 14 | 24 | 488 | 43 | 487 | 2.55e-136 | 403 |
| Msa0338660 | AT5G60580.4 | 51.992 | 477 | 190 | 15 | 25 | 488 | 44 | 494 | 1.06e-133 | 396 |
| Msa0338660 | AT5G60580.2 | 51.992 | 477 | 190 | 15 | 25 | 488 | 44 | 494 | 1.06e-133 | 396 |
| Msa0338660 | AT3G09760.1 | 44.000 | 450 | 217 | 13 | 10 | 448 | 36 | 461 | 9.03e-109 | 332 |
| Msa0338660 | AT5G03180.1 | 46.467 | 368 | 166 | 9 | 95 | 448 | 97 | 447 | 6.50e-98 | 303 |
| Msa0338660 | AT5G03180.4 | 45.968 | 372 | 166 | 10 | 95 | 448 | 62 | 416 | 2.90e-96 | 298 |
| Msa0338660 | AT5G03180.2 | 45.968 | 372 | 166 | 10 | 95 | 448 | 97 | 451 | 6.38e-96 | 298 |
| Msa0338660 | AT5G03180.5 | 45.875 | 303 | 136 | 8 | 95 | 386 | 97 | 382 | 9.31e-72 | 234 |
| Msa0338660 | AT5G03180.3 | 45.277 | 307 | 136 | 9 | 95 | 386 | 97 | 386 | 7.88e-70 | 229 |
| Msa0338660 | AT3G06330.1 | 35.278 | 360 | 209 | 6 | 94 | 449 | 79 | 418 | 3.06e-59 | 201 |
| Msa0338660 | AT3G06330.4 | 45.588 | 204 | 109 | 2 | 247 | 449 | 105 | 307 | 7.13e-59 | 197 |
| Msa0338660 | AT3G06330.2 | 45.588 | 204 | 109 | 2 | 247 | 449 | 47 | 249 | 1.22e-58 | 194 |
| Msa0338660 | AT5G18760.1 | 44.444 | 189 | 103 | 2 | 247 | 434 | 201 | 388 | 1.26e-46 | 167 |
| Msa0338660 | AT3G06330.3 | 35.959 | 292 | 163 | 6 | 94 | 381 | 79 | 350 | 2.52e-42 | 154 |
| Msa0338660 | AT5G18760.2 | 53.571 | 112 | 50 | 2 | 247 | 357 | 201 | 311 | 4.49e-32 | 126 |
| Msa0338660 | AT2G37950.1 | 41.176 | 68 | 39 | 1 | 237 | 303 | 72 | 139 | 2.00e-11 | 63.9 |
Find 122 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGCAGGTTGGGAAAA+TGG | 0.138378 | 2_4:+59071286 | Msa0338660:intron |
| TCATTACCTGTTGAAGAAAT+TGG | 0.156769 | 2_4:+59069301 | Msa0338660:CDS |
| ACCACTTAATTGCACATTCT+TGG | 0.227943 | 2_4:-59070336 | None:intergenic |
| ATTCTTCTTGCATCATTTGC+TGG | 0.234700 | 2_4:+59071862 | Msa0338660:CDS |
| TGCATCTGCTCAGTTTCTTT+TGG | 0.242323 | 2_4:+59071672 | Msa0338660:CDS |
| CACTGTGGTTTGGTTGTGAT+TGG | 0.245302 | 2_4:-59072043 | None:intergenic |
| GATATTGAAAAGGCGGTAAT+TGG | 0.260281 | 2_4:+59069178 | Msa0338660:CDS |
| TATTTAATCCTAAGATTAAT+AGG | 0.267421 | 2_4:+59069272 | Msa0338660:CDS |
| AAGAAAATGCTAATTAAATT+AGG | 0.267688 | 2_4:-59068511 | None:intergenic |
| GGTTGGTAAGCAAGCAGTTT+TGG | 0.274738 | 2_4:+59071837 | Msa0338660:intron |
| CTTGGGACAATAGGTTTCTA+TGG | 0.276816 | 2_4:+59072229 | Msa0338660:three_prime_UTR |
| TATTACCAAAACTGAATTTC+AGG | 0.277001 | 2_4:+59069134 | Msa0338660:CDS |
| CTTGCATCATTTGCTGGGTT+TGG | 0.287597 | 2_4:+59071868 | Msa0338660:CDS |
| GATGAAGTCCTATTAATCTT+AGG | 0.290773 | 2_4:-59069280 | None:intergenic |
| GAAGGTGGACTTGGTGTTAA+TGG | 0.301043 | 2_4:-59068995 | None:intergenic |
| AACTGAATTTCAGGTATAAT+AGG | 0.331782 | 2_4:+59069143 | Msa0338660:CDS |
| AGGGAACAACTTGGGACAAT+AGG | 0.346073 | 2_4:+59072220 | Msa0338660:three_prime_UTR |
| ACTGAATTGAAGTCTATATA+TGG | 0.346434 | 2_4:+59072098 | Msa0338660:exon |
| CAGTGAGGAGCAAGTTCATC+TGG | 0.356091 | 2_4:+59071644 | Msa0338660:intron |
| TTATACCTGAAATTCAGTTT+TGG | 0.359041 | 2_4:-59069139 | None:intergenic |
| TACATTGTGCTTGCTGCAAT+AGG | 0.366210 | 2_4:+59072200 | Msa0338660:three_prime_UTR |
| AGACCGAGTACACAGGAAAA+TGG | 0.367823 | 2_4:-59071335 | None:intergenic |
| AGATTCTTCTGATGACTTGC+AGG | 0.375467 | 2_4:-59068933 | None:intergenic |
| ATTGATAATAATATCAATCT+TGG | 0.380971 | 2_4:+59069070 | Msa0338660:CDS |
| TTCTTCTTGCATCATTTGCT+GGG | 0.381720 | 2_4:+59071863 | Msa0338660:CDS |
| TTTCTGCAGGTTGGGAAAAT+GGG | 0.382413 | 2_4:+59071287 | Msa0338660:intron |
| TTCTTCAAAACCGATTGTAT+AGG | 0.383134 | 2_4:+59072131 | Msa0338660:three_prime_UTR |
| TCCTGGTGAGGCCTTGCTCC+AGG | 0.386569 | 2_4:-59070457 | None:intergenic |
| GGCCCTACAAAAGAACTTTC+CGG | 0.389827 | 2_4:-59069205 | None:intergenic |
| AAGAGAAATGAAAATTGCTT+TGG | 0.391415 | 2_4:-59071312 | None:intergenic |
| CGCTATGACATCTACAACCA+TGG | 0.394503 | 2_4:+59071364 | Msa0338660:CDS |
| AGTCCGGGGTGAGTGGAAAA+AGG | 0.395216 | 2_4:+59068398 | Msa0338660:five_prime_UTR |
| AAGTTGAGCATTTATGAAAC+AGG | 0.396845 | 2_4:-59068466 | None:intergenic |
| GTAAACACTGAGTTTGCTTT+TGG | 0.400239 | 2_4:+59069328 | Msa0338660:CDS |
| CATGAGAAGCCTTCAATCTC+AGG | 0.401091 | 2_4:+59069229 | Msa0338660:CDS |
| ACACGTCCAATTTCTTCAAC+AGG | 0.403721 | 2_4:-59069307 | None:intergenic |
| GTTGTCTATTACTGCTAGAA+TGG | 0.409010 | 2_4:+59072358 | Msa0338660:three_prime_UTR |
| CGTGCCTGAAGTCATCTTCC+TGG | 0.419172 | 2_4:-59070474 | None:intergenic |
| TGAAATTAACAGGGTTTGGC+AGG | 0.424843 | 2_4:+59071138 | Msa0338660:intron |
| TTTGCAGTTGCACTGTGGTT+TGG | 0.425522 | 2_4:-59072053 | None:intergenic |
| AAGTAAAGTACCTTGTGAAC+TGG | 0.426819 | 2_4:-59068716 | None:intergenic |
| ACTTCCACAGCAAAGGATAC+TGG | 0.430854 | 2_4:+59070005 | Msa0338660:CDS |
| AGATTGATATTATTATCAAT+TGG | 0.432243 | 2_4:-59069067 | None:intergenic |
| TACTGTAAAAGCAAAGAGTC+CGG | 0.438500 | 2_4:+59068382 | None:intergenic |
| TCTTTCACTTCCTTTGCACC+CGG | 0.444418 | 2_4:-59069972 | None:intergenic |
| ACCAAGAATGTGCAATTAAG+TGG | 0.444610 | 2_4:+59070335 | Msa0338660:CDS |
| CGTGTTATTCCTTCCACCCC+GGG | 0.447122 | 2_4:+59069954 | Msa0338660:CDS |
| TTGCAAAGGTGAACTTGCCT+TGG | 0.449312 | 2_4:+59070309 | Msa0338660:CDS |
| ACATTGTGCTTGCTGCAATA+GGG | 0.450594 | 2_4:+59072201 | Msa0338660:three_prime_UTR |
| CTTTCACTTCCTTTGCACCC+GGG | 0.457658 | 2_4:-59069971 | None:intergenic |
| GACACTGATCCTGAGATTGA+AGG | 0.464802 | 2_4:-59069238 | None:intergenic |
| AGGAGGTGAGACATTGAAGA+TGG | 0.468154 | 2_4:+59070279 | Msa0338660:CDS |
| GCAGCAAGCACAATGTACTA+TGG | 0.473687 | 2_4:-59072194 | None:intergenic |
| CATTTATGAAACAGGTTATG+TGG | 0.475922 | 2_4:-59068458 | None:intergenic |
| GATTCTGAGTTCGAGCACTT+TGG | 0.480832 | 2_4:-59070435 | None:intergenic |
| AGTTTAATCGCCTATACAAT+CGG | 0.481535 | 2_4:-59072141 | None:intergenic |
| CTCACCAGGAAGATGACTTC+AGG | 0.483540 | 2_4:+59070470 | Msa0338660:CDS |
| AGTGCTCGAACTCAGAATCC+TGG | 0.485651 | 2_4:+59070439 | Msa0338660:CDS |
| TCCTTTGCACCCGGGGTGGA+AGG | 0.490851 | 2_4:-59069963 | None:intergenic |
| TCCTTCCACCCCGGGTGCAA+AGG | 0.498465 | 2_4:+59069962 | Msa0338660:CDS |
| ATGAAACAGGTTATGTGGAA+TGG | 0.499700 | 2_4:-59068453 | None:intergenic |
| ACCTTCCTGTCACTCTCTTA+CGG | 0.503603 | 2_4:+59070410 | Msa0338660:CDS |
| TTCATCATCGGATATTGAAA+AGG | 0.507280 | 2_4:+59069168 | Msa0338660:CDS |
| TCCTGGAGCAAGGCCTCACC+AGG | 0.512473 | 2_4:+59070456 | Msa0338660:CDS |
| CCGTGTTATTCCTTCCACCC+CGG | 0.512766 | 2_4:+59069953 | Msa0338660:CDS |
| TGATTGGGAAGACTTGATTG+TGG | 0.514541 | 2_4:-59072027 | None:intergenic |
| ACTGTGGTTTGGTTGTGATT+GGG | 0.516809 | 2_4:-59072042 | None:intergenic |
| TTTACTCGTTCAGAAAATGA+TGG | 0.517505 | 2_4:+59070190 | Msa0338660:intron |
| TTTCACTTCCTTTGCACCCG+GGG | 0.520277 | 2_4:-59069970 | None:intergenic |
| CGGTGAAGATATAGCTGAAG+AGG | 0.520641 | 2_4:+59070219 | Msa0338660:CDS |
| TGCTTGCTTCTTGTGTTGTG+TGG | 0.521414 | 2_4:-59068591 | None:intergenic |
| CTCCTCCTTGCACACATCAC+AGG | 0.524660 | 2_4:-59070380 | None:intergenic |
| TGGATCCGTAAGAGAGTGAC+AGG | 0.526179 | 2_4:-59070415 | None:intergenic |
| TGCACATTCTTGGTGAGCCA+AGG | 0.533062 | 2_4:-59070326 | None:intergenic |
| CACTTCCTTTGCACCCGGGG+TGG | 0.540335 | 2_4:-59069967 | None:intergenic |
| ACTGTAAAAGCAAAGAGTCC+GGG | 0.540967 | 2_4:+59068383 | None:intergenic |
| GATTGGGAAGACTTGATTGT+GGG | 0.541818 | 2_4:-59072026 | None:intergenic |
| GAGTTCGAGCTATCGTCCCC+TGG | 0.542518 | 2_4:-59069875 | None:intergenic |
| ATGCTGACAATGACAAGCAC+AGG | 0.545339 | 2_4:-59071166 | None:intergenic |
| GTCCACCTTCAACACAAAAG+AGG | 0.548163 | 2_4:+59069008 | Msa0338660:CDS |
| AGCAAAGAGTCCGGGGTGAG+TGG | 0.551715 | 2_4:+59068391 | Msa0338660:five_prime_UTR |
| TTATTGCGGAGGTACTCAAA+TGG | 0.552599 | 2_4:+59071914 | Msa0338660:CDS |
| CAAATGGAGAAGAAGATGGC+TGG | 0.559696 | 2_4:+59071930 | Msa0338660:CDS |
| CTGAAGTCATCTTCCTGGTG+AGG | 0.563583 | 2_4:-59070469 | None:intergenic |
| TCTCAAGTGACGACACAAGA+AGG | 0.563821 | 2_4:+59071979 | Msa0338660:CDS |
| AAAAGGAAATACAAGTAGGT+GGG | 0.571829 | 2_4:+59068415 | Msa0338660:five_prime_UTR |
| ATTAAGTGGTTTAGTATCAG+AGG | 0.572247 | 2_4:+59070349 | Msa0338660:CDS |
| GTGCAAAGGAAGTGAAAGAA+TGG | 0.581962 | 2_4:+59069976 | Msa0338660:CDS |
| CTGTGATGTGTGCAAGGAGG+AGG | 0.583666 | 2_4:+59070381 | Msa0338660:CDS |
| GATTCTTCTGATGACTTGCA+GGG | 0.583765 | 2_4:-59068932 | None:intergenic |
| TACTCAAATGGAGAAGAAGA+TGG | 0.584177 | 2_4:+59071926 | Msa0338660:CDS |
| GAGATTGAAGGCTTCTCATG+AGG | 0.592520 | 2_4:-59069226 | None:intergenic |
| TGCTGCAATAGGGAACAACT+TGG | 0.593135 | 2_4:+59072211 | Msa0338660:three_prime_UTR |
| TTCTTACTAAAAGCTGCTCG+AGG | 0.595865 | 2_4:-59071207 | None:intergenic |
| TCCACCTTCAACACAAAAGA+GGG | 0.596859 | 2_4:+59069009 | Msa0338660:CDS |
| AAAGGCGGTAATTGGAGCGC+CGG | 0.597556 | 2_4:+59069186 | Msa0338660:CDS |
| TTTGGTTAGAACTCATATTG+TGG | 0.599197 | 2_4:-59068646 | None:intergenic |
| CAAGACCTGTGATGTGTGCA+AGG | 0.600652 | 2_4:+59070375 | Msa0338660:CDS |
| GAGCGGAAGTTCAGTTATTG+CGG | 0.601376 | 2_4:+59071900 | Msa0338660:CDS |
| GTATAATAGGACTTCATCAT+CGG | 0.611914 | 2_4:+59069156 | Msa0338660:CDS |
| ACTTTCTCTTCCAGTTCACA+AGG | 0.611939 | 2_4:+59068706 | Msa0338660:CDS |
| CTGTAAAAGCAAAGAGTCCG+GGG | 0.616846 | 2_4:+59068384 | None:intergenic |
| GATACCAGTATCCTTTGCTG+TGG | 0.623628 | 2_4:-59070009 | None:intergenic |
| GAACTCAGAATCCTGGAGCA+AGG | 0.624217 | 2_4:+59070446 | Msa0338660:CDS |
| ATCATCGGATATTGAAAAGG+CGG | 0.624923 | 2_4:+59069171 | Msa0338660:CDS |
| CGGAAGTTCAGTTATTGCGG+AGG | 0.627055 | 2_4:+59071903 | Msa0338660:CDS |
| GCTATGACATCTACAACCAT+GGG | 0.637028 | 2_4:+59071365 | Msa0338660:CDS |
| TCCGTAAGAGAGTGACAGGA+AGG | 0.644347 | 2_4:-59070411 | None:intergenic |
| CAAGAAGGACTATATCCTCA+AGG | 0.645178 | 2_4:+59071994 | Msa0338660:CDS |
| TCAGAAAATGATGGTGATGA+CGG | 0.645217 | 2_4:+59070199 | Msa0338660:intron |
| GCTGCAATAGGGAACAACTT+GGG | 0.645747 | 2_4:+59072212 | Msa0338660:three_prime_UTR |
| ATTGGGAAGACTTGATTGTG+GGG | 0.647865 | 2_4:-59072025 | None:intergenic |
| TGTGGGGTAATTACACCTTG+AGG | 0.662322 | 2_4:-59072009 | None:intergenic |
| AAGATGGAATGCTGTTGCAA+AGG | 0.669332 | 2_4:+59070295 | Msa0338660:CDS |
| CTGATTGAGCTATGTGAAGG+AGG | 0.675108 | 2_4:+59070262 | Msa0338660:CDS |
| TGTCTGATTGAGCTATGTGA+AGG | 0.685304 | 2_4:+59070259 | Msa0338660:CDS |
| GGAGACTAGACCGAGTACAC+AGG | 0.689360 | 2_4:-59071342 | None:intergenic |
| CCGGGGTGGAAGGAATAACA+CGG | 0.699439 | 2_4:-59069953 | None:intergenic |
| GGGTTTGGTGTAATGATGAG+CGG | 0.706372 | 2_4:+59071883 | Msa0338660:CDS |
| CTAGCAGTAATAGACAACAA+AGG | 0.710802 | 2_4:-59072353 | None:intergenic |
| CATGGTTGTAGATGTCATAG+CGG | 0.747961 | 2_4:-59071363 | None:intergenic |
| GACCTGTGATGTGTGCAAGG+AGG | 0.795153 | 2_4:+59070378 | Msa0338660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTATAATTTAATCTAAT+AGG | + | chr2_4:59068821-59068840 | Msa0338660:intron | 10.0% |
| !! | AAGAAAATGCTAATTAAATT+AGG | - | chr2_4:59068514-59068533 | None:intergenic | 15.0% |
| !!! | ATTTTCATATGTTGATAATT+TGG | + | chr2_4:59068885-59068904 | Msa0338660:intron | 15.0% |
| !! | AGATTGATATTATTATCAAT+TGG | - | chr2_4:59069070-59069089 | None:intergenic | 15.0% |
| !!! | ATTGATAATAATATCAATCT+TGG | + | chr2_4:59069070-59069089 | Msa0338660:CDS | 15.0% |
| !! | TATTTAATCCTAAGATTAAT+AGG | + | chr2_4:59069272-59069291 | Msa0338660:CDS | 15.0% |
| !!! | TTTTATGTGCAATTAATTAA+TGG | + | chr2_4:59069428-59069447 | Msa0338660:intron | 15.0% |
| !! | TTTATGTGCAATTAATTAAT+GGG | + | chr2_4:59069429-59069448 | Msa0338660:intron | 15.0% |
| !!! | TATATTTTCATTAGTTAGTA+AGG | + | chr2_4:59069457-59069476 | Msa0338660:intron | 15.0% |
| !!! | TTATGAAATTATCTAGAATA+TGG | + | chr2_4:59070619-59070638 | Msa0338660:intron | 15.0% |
| !!! | TATGAAATTATCTAGAATAT+GGG | + | chr2_4:59070620-59070639 | Msa0338660:intron | 15.0% |
| !!! | TTCATGTTTCATTTTTATTT+TGG | + | chr2_4:59071559-59071578 | Msa0338660:intron | 15.0% |
| !! | ATCTAATAGGAGTTAATATA+AGG | + | chr2_4:59068834-59068853 | Msa0338660:intron | 20.0% |
| !! | TATAAGGTATAGTATTTATG+TGG | + | chr2_4:59068850-59068869 | Msa0338660:intron | 20.0% |
| !! | TACAAGTACTAATCAATTAA+AGG | - | chr2_4:59069385-59069404 | None:intergenic | 20.0% |
| !! | AATAAGCAGAAAACAATTTA+TGG | + | chr2_4:59069630-59069649 | Msa0338660:intron | 20.0% |
| !! | TCCTTTATATGTTCAAATTA+GGG | - | chr2_4:59069747-59069766 | None:intergenic | 20.0% |
| !! | ATCCTTTATATGTTCAAATT+AGG | - | chr2_4:59069748-59069767 | None:intergenic | 20.0% |
| !! | TCATTAAACAAAAAAATCAC+TGG | - | chr2_4:59069793-59069812 | None:intergenic | 20.0% |
| !! | GATTAAATTGGTTAAAACAA+AGG | - | chr2_4:59069841-59069860 | None:intergenic | 20.0% |
| !!! | TTTTCCTTGTAATTTTTTCT+TGG | - | chr2_4:59069920-59069939 | None:intergenic | 20.0% |
| !! | AGAAAAAATTACAAGGAAAA+TGG | + | chr2_4:59069920-59069939 | Msa0338660:CDS | 20.0% |
| !!! | ATGAAATTATCTAGAATATG+GGG | + | chr2_4:59070621-59070640 | Msa0338660:intron | 20.0% |
| !! | AATATATTCATCGTATTTCT+CGG | - | chr2_4:59071409-59071428 | None:intergenic | 20.0% |
| !!! | TCTAAAATTGTGCATAAAAT+AGG | + | chr2_4:59071460-59071479 | Msa0338660:intron | 20.0% |
| !! | ATAACTTCATTCTATTAGTT+TGG | + | chr2_4:59071805-59071824 | Msa0338660:intron | 20.0% |
| !! | TTTTCATTTCACAACTCATA+AGG | + | chr2_4:59068547-59068566 | Msa0338660:five_prime_UTR | 25.0% |
| !!! | TCATATGTTGATAATTTGGA+AGG | + | chr2_4:59068889-59068908 | Msa0338660:intron | 25.0% |
| ! | TATTACCAAAACTGAATTTC+AGG | + | chr2_4:59069134-59069153 | Msa0338660:CDS | 25.0% |
| !! | TTATACCTGAAATTCAGTTT+TGG | - | chr2_4:59069142-59069161 | None:intergenic | 25.0% |
| !! | AACTGAATTTCAGGTATAAT+AGG | + | chr2_4:59069143-59069162 | Msa0338660:CDS | 25.0% |
| ! | ACCCTAATTTGAACATATAA+AGG | + | chr2_4:59069743-59069762 | Msa0338660:intron | 25.0% |
| ! | TTAACAGTTATATGTTGCTA+AGG | - | chr2_4:59069818-59069837 | None:intergenic | 25.0% |
| !!! | AATTTTTTCTTGGCTATCTA+CGG | - | chr2_4:59069910-59069929 | None:intergenic | 25.0% |
| ! | ATAGCCAAGAAAAAATTACA+AGG | + | chr2_4:59069913-59069932 | Msa0338660:CDS | 25.0% |
| ! | GCTATATGTTGAATGAATTA+TGG | + | chr2_4:59070526-59070545 | Msa0338660:intron | 25.0% |
| !! | TAACAAATAACTTGCAACTA+GGG | - | chr2_4:59070602-59070621 | None:intergenic | 25.0% |
| !! | ATAACAAATAACTTGCAACT+AGG | - | chr2_4:59070603-59070622 | None:intergenic | 25.0% |
| ! | TGCAGAAAGTTGAATAAATT+AGG | - | chr2_4:59071275-59071294 | None:intergenic | 25.0% |
| ! | TAATTTATTCAACTTTCTGC+AGG | + | chr2_4:59071274-59071293 | Msa0338660:intron | 25.0% |
| ! | AAGAGAAATGAAAATTGCTT+TGG | - | chr2_4:59071315-59071334 | None:intergenic | 25.0% |
| ! | ATATATTCATCGTATTTCTC+GGG | - | chr2_4:59071408-59071427 | None:intergenic | 25.0% |
| ! | CCAAAAGAATTATCAAATCA+AGG | - | chr2_4:59071530-59071549 | None:intergenic | 25.0% |
| !!! | CCTTGATTTGATAATTCTTT+TGG | + | chr2_4:59071527-59071546 | Msa0338660:intron | 25.0% |
| ! | ATAGAATGAAGTTATTCTTC+CGG | - | chr2_4:59071800-59071819 | None:intergenic | 25.0% |
| ! | ACTGAATTGAAGTCTATATA+TGG | + | chr2_4:59072098-59072117 | Msa0338660:exon | 25.0% |
| TGGAAAAAGGAAATACAAGT+AGG | + | chr2_4:59068411-59068430 | Msa0338660:five_prime_UTR | 30.0% | |
| AAAAAGGAAATACAAGTAGG+TGG | + | chr2_4:59068414-59068433 | Msa0338660:five_prime_UTR | 30.0% | |
| AAAAGGAAATACAAGTAGGT+GGG | + | chr2_4:59068415-59068434 | Msa0338660:five_prime_UTR | 30.0% | |
| CATTTATGAAACAGGTTATG+TGG | - | chr2_4:59068461-59068480 | None:intergenic | 30.0% | |
| AAGTTGAGCATTTATGAAAC+AGG | - | chr2_4:59068469-59068488 | None:intergenic | 30.0% | |
| TTTGGTTAGAACTCATATTG+TGG | - | chr2_4:59068649-59068668 | None:intergenic | 30.0% | |
| !!! | GTTCATGATGATGTTGTTTT+TGG | - | chr2_4:59068667-59068686 | None:intergenic | 30.0% |
| ! | TTGGAAGGAAAATCTTTTGA+TGG | + | chr2_4:59068904-59068923 | Msa0338660:intron | 30.0% |
| GTATAATAGGACTTCATCAT+CGG | + | chr2_4:59069156-59069175 | Msa0338660:CDS | 30.0% | |
| TTCATCATCGGATATTGAAA+AGG | + | chr2_4:59069168-59069187 | Msa0338660:CDS | 30.0% | |
| GATGAAGTCCTATTAATCTT+AGG | - | chr2_4:59069283-59069302 | None:intergenic | 30.0% | |
| TCATTACCTGTTGAAGAAAT+TGG | + | chr2_4:59069301-59069320 | Msa0338660:CDS | 30.0% | |
| TCAATTAAAGGCCTTACATA+AGG | - | chr2_4:59069373-59069392 | None:intergenic | 30.0% | |
| !! | TTAGTTAGTAAGGTCTTGTT+TGG | + | chr2_4:59069467-59069486 | Msa0338660:intron | 30.0% |
| !! | TAGTTAGTAAGGTCTTGTTT+GGG | + | chr2_4:59069468-59069487 | Msa0338660:intron | 30.0% |
| ATAAGCGCTTATCATATTAG+TGG | + | chr2_4:59069516-59069535 | Msa0338660:intron | 30.0% | |
| TTATAAGTGTTTATGCCAGT+AGG | + | chr2_4:59069693-59069712 | Msa0338660:intron | 30.0% | |
| ACTTATTTGAACTTACCTAC+TGG | - | chr2_4:59069711-59069730 | None:intergenic | 30.0% | |
| TCTCTGCAAAAGGATTAAAT+TGG | - | chr2_4:59069853-59069872 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTTGGCTATCTAC+GGG | - | chr2_4:59069909-59069928 | None:intergenic | 30.0% |
| ! | TTATTGACAGCATTTAGGAT+TGG | - | chr2_4:59070155-59070174 | None:intergenic | 30.0% |
| ! | ATCATTTTCTGAACGAGTAA+AGG | - | chr2_4:59070191-59070210 | None:intergenic | 30.0% |
| TTTACTCGTTCAGAAAATGA+TGG | + | chr2_4:59070190-59070209 | Msa0338660:intron | 30.0% | |
| ATTAAGTGGTTTAGTATCAG+AGG | + | chr2_4:59070349-59070368 | Msa0338660:CDS | 30.0% | |
| TAAACAGCGTATTGTCATAT+TGG | - | chr2_4:59070796-59070815 | None:intergenic | 30.0% | |
| AATTTCAACTAGATATCGCA+CGG | - | chr2_4:59070930-59070949 | None:intergenic | 30.0% | |
| ! | TAAGCAATCAATGTTTTCCT+TGG | + | chr2_4:59071005-59071024 | Msa0338660:intron | 30.0% |
| GTAAAATAGTGCACTTGTAT+TGG | - | chr2_4:59071041-59071060 | None:intergenic | 30.0% | |
| ! | CAAGTGCACTATTTTACAAA+TGG | + | chr2_4:59071044-59071063 | Msa0338660:intron | 30.0% |
| AATTGTCTGCTGAAATTAAC+AGG | + | chr2_4:59071128-59071147 | Msa0338660:intron | 30.0% | |
| ATTGTCTGCTGAAATTAACA+GGG | + | chr2_4:59071129-59071148 | Msa0338660:intron | 30.0% | |
| TATATTCATCGTATTTCTCG+GGG | - | chr2_4:59071407-59071426 | None:intergenic | 30.0% | |
| ! | GGTTCTTTTGCAAACATTAT+AGG | + | chr2_4:59071481-59071500 | Msa0338660:intron | 30.0% |
| ! | ACAATTAGGGTTTGCTTAAA+TGG | - | chr2_4:59071615-59071634 | None:intergenic | 30.0% |
| ACTGGAAAAGGAAACAATTA+GGG | - | chr2_4:59071628-59071647 | None:intergenic | 30.0% | |
| TATCATAGTCTATTACCAAG+GGG | - | chr2_4:59071723-59071742 | None:intergenic | 30.0% | |
| GTATCATAGTCTATTACCAA+GGG | - | chr2_4:59071724-59071743 | None:intergenic | 30.0% | |
| !!! | ATCGGTTTTGAAGAAATGAA+AGG | - | chr2_4:59072126-59072145 | None:intergenic | 30.0% |
| TTCTTCAAAACCGATTGTAT+AGG | + | chr2_4:59072131-59072150 | Msa0338660:three_prime_UTR | 30.0% | |
| AGTTTAATCGCCTATACAAT+CGG | - | chr2_4:59072144-59072163 | None:intergenic | 30.0% | |
| ATGAAACAGGTTATGTGGAA+TGG | - | chr2_4:59068456-59068475 | None:intergenic | 35.0% | |
| !! | GTGGTGCATTTGTTTGTTTT+AGG | - | chr2_4:59068575-59068594 | None:intergenic | 35.0% |
| ! | AAGTAAAGTACCTTGTGAAC+TGG | - | chr2_4:59068719-59068738 | None:intergenic | 35.0% |
| ATCATCGGATATTGAAAAGG+CGG | + | chr2_4:59069171-59069190 | Msa0338660:CDS | 35.0% | |
| GATATTGAAAAGGCGGTAAT+TGG | + | chr2_4:59069178-59069197 | Msa0338660:CDS | 35.0% | |
| !! | GTAAACACTGAGTTTGCTTT+TGG | + | chr2_4:59069328-59069347 | Msa0338660:CDS | 35.0% |
| !! | AGTTGTTTTCATAAGCTTCC+TGG | + | chr2_4:59069604-59069623 | Msa0338660:intron | 35.0% |
| !! | TGTTTTCTGCTTATTTCTCC+AGG | - | chr2_4:59069625-59069644 | None:intergenic | 35.0% |
| ! | AGCTTGTTTGAGAGAACTTA+TGG | - | chr2_4:59069674-59069693 | None:intergenic | 35.0% |
| TGTTCAAATTAGGGTCTCTT+TGG | - | chr2_4:59069738-59069757 | None:intergenic | 35.0% | |
| GTTAAAAACTTCCACAGCAA+AGG | + | chr2_4:59069998-59070017 | Msa0338660:CDS | 35.0% | |
| AGAACTTGTATAAGCAATCG+CGG | + | chr2_4:59070040-59070059 | Msa0338660:intron | 35.0% | |
| TCGAGTTATTGACAGCATTT+AGG | - | chr2_4:59070160-59070179 | None:intergenic | 35.0% | |
| ! | TCAGAAAATGATGGTGATGA+CGG | + | chr2_4:59070199-59070218 | Msa0338660:intron | 35.0% |
| ACCAAGAATGTGCAATTAAG+TGG | + | chr2_4:59070335-59070354 | Msa0338660:CDS | 35.0% | |
| ACCACTTAATTGCACATTCT+TGG | - | chr2_4:59070339-59070358 | None:intergenic | 35.0% | |
| ! | ATAACTTGCAACTAGGGAAA+TGG | - | chr2_4:59070596-59070615 | None:intergenic | 35.0% |
| TTAGATGCATGACAGTATAC+GGG | - | chr2_4:59070655-59070674 | None:intergenic | 35.0% | |
| GTTAGATGCATGACAGTATA+CGG | - | chr2_4:59070656-59070675 | None:intergenic | 35.0% | |
| GCTATCTCTGAATTTATCAC+TGG | + | chr2_4:59070695-59070714 | Msa0338660:intron | 35.0% | |
| CTTGTTTGCATTGAAGTTGT+AGG | + | chr2_4:59070898-59070917 | Msa0338660:intron | 35.0% | |
| TTATTCAACTTTCTGCAGGT+TGG | + | chr2_4:59071278-59071297 | Msa0338660:intron | 35.0% | |
| TATTCAACTTTCTGCAGGTT+GGG | + | chr2_4:59071279-59071298 | Msa0338660:intron | 35.0% | |
| ! | ATATTTTGCAAACCTACCCA+TGG | - | chr2_4:59071384-59071403 | None:intergenic | 35.0% |
| ! | TTTTCTGTCCATGCTTGTTT+GGG | + | chr2_4:59071584-59071603 | Msa0338660:intron | 35.0% |
| CACTGGAAAAGGAAACAATT+AGG | - | chr2_4:59071629-59071648 | None:intergenic | 35.0% | |
| ! | AATTGTTTCCTTTTCCAGTG+AGG | + | chr2_4:59071629-59071648 | Msa0338660:intron | 35.0% |
| CGTATCATAGTCTATTACCA+AGG | - | chr2_4:59071725-59071744 | None:intergenic | 35.0% | |
| ATGAAGTTATTCTTCCGGTA+GGG | - | chr2_4:59071795-59071814 | None:intergenic | 35.0% | |
| AATGAAGTTATTCTTCCGGT+AGG | - | chr2_4:59071796-59071815 | None:intergenic | 35.0% | |
| ATTCTTCTTGCATCATTTGC+TGG | + | chr2_4:59071862-59071881 | Msa0338660:CDS | 35.0% | |
| TTCTTCTTGCATCATTTGCT+GGG | + | chr2_4:59071863-59071882 | Msa0338660:CDS | 35.0% | |
| TACTCAAATGGAGAAGAAGA+TGG | + | chr2_4:59071926-59071945 | Msa0338660:CDS | 35.0% | |
| ! | GCAGAATTTTACTACTTTGC+AGG | + | chr2_4:59072167-59072186 | Msa0338660:three_prime_UTR | 35.0% |
| CTAGCAGTAATAGACAACAA+AGG | - | chr2_4:59072356-59072375 | None:intergenic | 35.0% | |
| GTTGTCTATTACTGCTAGAA+TGG | + | chr2_4:59072358-59072377 | Msa0338660:three_prime_UTR | 35.0% | |
| ACTTTCTCTTCCAGTTCACA+AGG | + | chr2_4:59068706-59068725 | Msa0338660:CDS | 40.0% | |
| ! | GATTCTTCTGATGACTTGCA+GGG | - | chr2_4:59068935-59068954 | None:intergenic | 40.0% |
| ! | AGATTCTTCTGATGACTTGC+AGG | - | chr2_4:59068936-59068955 | None:intergenic | 40.0% |
| !! | TTTTGTGTTGAAGGTGGACT+TGG | - | chr2_4:59069007-59069026 | None:intergenic | 40.0% |
| TCCACCTTCAACACAAAAGA+GGG | + | chr2_4:59069009-59069028 | Msa0338660:CDS | 40.0% | |
| ! | TTCACCCTCTTTTGTGTTGA+AGG | - | chr2_4:59069016-59069035 | None:intergenic | 40.0% |
| ACACGTCCAATTTCTTCAAC+AGG | - | chr2_4:59069310-59069329 | None:intergenic | 40.0% | |
| !! | AACACTGAGTTTGCTTTTGG+TGG | + | chr2_4:59069331-59069350 | Msa0338660:CDS | 40.0% |
| !! | TTTGCTTTTGGTGGATGTCT+TGG | + | chr2_4:59069340-59069359 | Msa0338660:CDS | 40.0% |
| ! | TTGGTGCTTCTCCTTATGTA+AGG | + | chr2_4:59069359-59069378 | Msa0338660:intron | 40.0% |
| GTGCAAAGGAAGTGAAAGAA+TGG | + | chr2_4:59069976-59069995 | Msa0338660:CDS | 40.0% | |
| TGTCTGATTGAGCTATGTGA+AGG | + | chr2_4:59070259-59070278 | Msa0338660:CDS | 40.0% | |
| AAGATGGAATGCTGTTGCAA+AGG | + | chr2_4:59070295-59070314 | Msa0338660:CDS | 40.0% | |
| !! | ATGACAGTATACGGGTTGAT+TGG | - | chr2_4:59070647-59070666 | None:intergenic | 40.0% |
| !!! | TATCACTGGTTTTGCACATC+CGG | + | chr2_4:59070709-59070728 | Msa0338660:intron | 40.0% |
| GACTACTTGAAGCATGAAAG+TGG | - | chr2_4:59070960-59070979 | None:intergenic | 40.0% | |
| ! | ATGTTTTCCTTGGAGTTCTG+TGG | + | chr2_4:59071015-59071034 | Msa0338660:intron | 40.0% |
| CTGCTGAAATTAACAGGGTT+TGG | + | chr2_4:59071134-59071153 | Msa0338660:intron | 40.0% | |
| TGAAATTAACAGGGTTTGGC+AGG | + | chr2_4:59071138-59071157 | Msa0338660:intron | 40.0% | |
| TTCTTACTAAAAGCTGCTCG+AGG | - | chr2_4:59071210-59071229 | None:intergenic | 40.0% | |
| ! | TTTCTGCAGGTTGGGAAAAT+GGG | + | chr2_4:59071287-59071306 | Msa0338660:intron | 40.0% |
| ! | CTTCCATTTTCCTGTGTACT+CGG | + | chr2_4:59071332-59071351 | Msa0338660:CDS | 40.0% |
| CATGGTTGTAGATGTCATAG+CGG | - | chr2_4:59071366-59071385 | None:intergenic | 40.0% | |
| GCTATGACATCTACAACCAT+GGG | + | chr2_4:59071365-59071384 | Msa0338660:CDS | 40.0% | |
| CAAACAAGCATGGACAGAAA+AGG | - | chr2_4:59071585-59071604 | None:intergenic | 40.0% | |
| ! | CTTTTCTGTCCATGCTTGTT+TGG | + | chr2_4:59071583-59071602 | Msa0338660:intron | 40.0% |
| ! | TGCATCTGCTCAGTTTCTTT+TGG | + | chr2_4:59071672-59071691 | Msa0338660:CDS | 40.0% |
| ! | ATCTGCTCAGTTTCTTTTGG+TGG | + | chr2_4:59071675-59071694 | Msa0338660:CDS | 40.0% |
| TGAAGTTATTCTTCCGGTAG+GGG | - | chr2_4:59071794-59071813 | None:intergenic | 40.0% | |
| ! | CTATTAGTTTGGAAACCTGC+AGG | + | chr2_4:59071816-59071835 | Msa0338660:intron | 40.0% |
| !! | TTATTGCGGAGGTACTCAAA+TGG | + | chr2_4:59071914-59071933 | Msa0338660:CDS | 40.0% |
| CAAGAAGGACTATATCCTCA+AGG | + | chr2_4:59071994-59072013 | Msa0338660:CDS | 40.0% | |
| ATTGGGAAGACTTGATTGTG+GGG | - | chr2_4:59072028-59072047 | None:intergenic | 40.0% | |
| GATTGGGAAGACTTGATTGT+GGG | - | chr2_4:59072029-59072048 | None:intergenic | 40.0% | |
| TGATTGGGAAGACTTGATTG+TGG | - | chr2_4:59072030-59072049 | None:intergenic | 40.0% | |
| !! | ACTGTGGTTTGGTTGTGATT+GGG | - | chr2_4:59072045-59072064 | None:intergenic | 40.0% |
| ! | TTGATTTTGCAGTTGCACTG+TGG | - | chr2_4:59072061-59072080 | None:intergenic | 40.0% |
| ! | TACATTGTGCTTGCTGCAAT+AGG | + | chr2_4:59072200-59072219 | Msa0338660:three_prime_UTR | 40.0% |
| ! | ACATTGTGCTTGCTGCAATA+GGG | + | chr2_4:59072201-59072220 | Msa0338660:three_prime_UTR | 40.0% |
| CTTGGGACAATAGGTTTCTA+TGG | + | chr2_4:59072229-59072248 | Msa0338660:three_prime_UTR | 40.0% | |
| ! | TTTCCTTTTTCCACTCACCC+CGG | - | chr2_4:59068404-59068423 | None:intergenic | 45.0% |
| TGCTTGCTTCTTGTGTTGTG+TGG | - | chr2_4:59068594-59068613 | None:intergenic | 45.0% | |
| !! | GAAGGTGGACTTGGTGTTAA+TGG | - | chr2_4:59068998-59069017 | None:intergenic | 45.0% |
| GTCCACCTTCAACACAAAAG+AGG | + | chr2_4:59069008-59069027 | Msa0338660:CDS | 45.0% | |
| ! | ACCCTCTTTTGTGTTGAAGG+TGG | - | chr2_4:59069013-59069032 | None:intergenic | 45.0% |
| ! | CGCCGGAAAGTTCTTTTGTA+GGG | + | chr2_4:59069203-59069222 | Msa0338660:CDS | 45.0% |
| GGCCCTACAAAAGAACTTTC+CGG | - | chr2_4:59069208-59069227 | None:intergenic | 45.0% | |
| GAGATTGAAGGCTTCTCATG+AGG | - | chr2_4:59069229-59069248 | None:intergenic | 45.0% | |
| CATGAGAAGCCTTCAATCTC+AGG | + | chr2_4:59069229-59069248 | Msa0338660:CDS | 45.0% | |
| GACACTGATCCTGAGATTGA+AGG | - | chr2_4:59069241-59069260 | None:intergenic | 45.0% | |
| ! | AATCCTTTTGCAGAGAAGCC+AGG | + | chr2_4:59069857-59069876 | Msa0338660:intron | 45.0% |
| ! | ATCCTTTTGCAGAGAAGCCA+GGG | + | chr2_4:59069858-59069877 | Msa0338660:intron | 45.0% |
| TCTTTCACTTCCTTTGCACC+CGG | - | chr2_4:59069975-59069994 | None:intergenic | 45.0% | |
| ACTTCCACAGCAAAGGATAC+TGG | + | chr2_4:59070005-59070024 | Msa0338660:CDS | 45.0% | |
| GATACCAGTATCCTTTGCTG+TGG | - | chr2_4:59070012-59070031 | None:intergenic | 45.0% | |
| CGGTGAAGATATAGCTGAAG+AGG | + | chr2_4:59070219-59070238 | Msa0338660:CDS | 45.0% | |
| CTGATTGAGCTATGTGAAGG+AGG | + | chr2_4:59070262-59070281 | Msa0338660:CDS | 45.0% | |
| AGGAGGTGAGACATTGAAGA+TGG | + | chr2_4:59070279-59070298 | Msa0338660:CDS | 45.0% | |
| TTGCAAAGGTGAACTTGCCT+TGG | + | chr2_4:59070309-59070328 | Msa0338660:CDS | 45.0% | |
| ACCTTCCTGTCACTCTCTTA+CGG | + | chr2_4:59070410-59070429 | Msa0338660:CDS | 45.0% | |
| GATTCTGAGTTCGAGCACTT+TGG | - | chr2_4:59070438-59070457 | None:intergenic | 45.0% | |
| CAGCTATCTAACAACACTGC+CGG | - | chr2_4:59070731-59070750 | None:intergenic | 45.0% | |
| ATGCTGACAATGACAAGCAC+AGG | - | chr2_4:59071169-59071188 | None:intergenic | 45.0% | |
| ! | CTTTCTGCAGGTTGGGAAAA+TGG | + | chr2_4:59071286-59071305 | Msa0338660:intron | 45.0% |
| AGACCGAGTACACAGGAAAA+TGG | - | chr2_4:59071338-59071357 | None:intergenic | 45.0% | |
| CGCTATGACATCTACAACCA+TGG | + | chr2_4:59071364-59071383 | Msa0338660:CDS | 45.0% | |
| TGACATCTACAACCATGGGT+AGG | + | chr2_4:59071369-59071388 | Msa0338660:intron | 45.0% | |
| TGGTGAAACCCAAACAAGCA+TGG | - | chr2_4:59071595-59071614 | None:intergenic | 45.0% | |
| ! | AACTTGCTCCTCACTGGAAA+AGG | - | chr2_4:59071640-59071659 | None:intergenic | 45.0% |
| TTATTCTTCCGGTAGGGGTT+TGG | - | chr2_4:59071789-59071808 | None:intergenic | 45.0% | |
| TAGTTTGGAAACCTGCAGGT+TGG | + | chr2_4:59071820-59071839 | Msa0338660:intron | 45.0% | |
| !!! | GGTTGGTAAGCAAGCAGTTT+TGG | + | chr2_4:59071837-59071856 | Msa0338660:intron | 45.0% |
| ! | CTTGCATCATTTGCTGGGTT+TGG | + | chr2_4:59071868-59071887 | Msa0338660:CDS | 45.0% |
| !! | GGGTTTGGTGTAATGATGAG+CGG | + | chr2_4:59071883-59071902 | Msa0338660:CDS | 45.0% |
| GAGCGGAAGTTCAGTTATTG+CGG | + | chr2_4:59071900-59071919 | Msa0338660:CDS | 45.0% | |
| CAAATGGAGAAGAAGATGGC+TGG | + | chr2_4:59071930-59071949 | Msa0338660:CDS | 45.0% | |
| TCTCAAGTGACGACACAAGA+AGG | + | chr2_4:59071979-59071998 | Msa0338660:CDS | 45.0% | |
| TGTGGGGTAATTACACCTTG+AGG | - | chr2_4:59072012-59072031 | None:intergenic | 45.0% | |
| !! | CACTGTGGTTTGGTTGTGAT+TGG | - | chr2_4:59072046-59072065 | None:intergenic | 45.0% |
| TTTGCAGTTGCACTGTGGTT+TGG | - | chr2_4:59072056-59072075 | None:intergenic | 45.0% | |
| GCAGCAAGCACAATGTACTA+TGG | - | chr2_4:59072197-59072216 | None:intergenic | 45.0% | |
| TGCTGCAATAGGGAACAACT+TGG | + | chr2_4:59072211-59072230 | Msa0338660:three_prime_UTR | 45.0% | |
| GCTGCAATAGGGAACAACTT+GGG | + | chr2_4:59072212-59072231 | Msa0338660:three_prime_UTR | 45.0% | |
| AGGGAACAACTTGGGACAAT+AGG | + | chr2_4:59072220-59072239 | Msa0338660:three_prime_UTR | 45.0% | |
| ! | GCGCCGGAAAGTTCTTTTGT+AGG | + | chr2_4:59069202-59069221 | Msa0338660:CDS | 50.0% |
| ! | TCCTTTTGCAGAGAAGCCAG+GGG | + | chr2_4:59069859-59069878 | Msa0338660:intron | 50.0% |
| TTTCACTTCCTTTGCACCCG+GGG | - | chr2_4:59069973-59069992 | None:intergenic | 50.0% | |
| CTTTCACTTCCTTTGCACCC+GGG | - | chr2_4:59069974-59069993 | None:intergenic | 50.0% | |
| TGCACATTCTTGGTGAGCCA+AGG | - | chr2_4:59070329-59070348 | None:intergenic | 50.0% | |
| CAAGACCTGTGATGTGTGCA+AGG | + | chr2_4:59070375-59070394 | Msa0338660:CDS | 50.0% | |
| TCCGTAAGAGAGTGACAGGA+AGG | - | chr2_4:59070414-59070433 | None:intergenic | 50.0% | |
| TGGATCCGTAAGAGAGTGAC+AGG | - | chr2_4:59070418-59070437 | None:intergenic | 50.0% | |
| AGTGCTCGAACTCAGAATCC+TGG | + | chr2_4:59070439-59070458 | Msa0338660:CDS | 50.0% | |
| GAACTCAGAATCCTGGAGCA+AGG | + | chr2_4:59070446-59070465 | Msa0338660:CDS | 50.0% | |
| CTGAAGTCATCTTCCTGGTG+AGG | - | chr2_4:59070472-59070491 | None:intergenic | 50.0% | |
| CTCACCAGGAAGATGACTTC+AGG | + | chr2_4:59070470-59070489 | Msa0338660:CDS | 50.0% | |
| ! | GTATTGGCCACAGAACTCCA+AGG | - | chr2_4:59071025-59071044 | None:intergenic | 50.0% |
| ! | CAGATGAACTTGCTCCTCAC+TGG | - | chr2_4:59071646-59071665 | None:intergenic | 50.0% |
| CAGTGAGGAGCAAGTTCATC+TGG | + | chr2_4:59071644-59071663 | Msa0338660:intron | 50.0% | |
| GACATGTACCAAACCCCTAC+CGG | + | chr2_4:59071778-59071797 | Msa0338660:intron | 50.0% | |
| CGGAAGTTCAGTTATTGCGG+AGG | + | chr2_4:59071903-59071922 | Msa0338660:CDS | 50.0% | |
| AGTCCGGGGTGAGTGGAAAA+AGG | + | chr2_4:59068398-59068417 | Msa0338660:five_prime_UTR | 55.0% | |
| AAAGGCGGTAATTGGAGCGC+CGG | + | chr2_4:59069186-59069205 | Msa0338660:CDS | 55.0% | |
| TCCCCTGGCTTCTCTGCAAA+AGG | - | chr2_4:59069863-59069882 | None:intergenic | 55.0% | |
| CCGGGGTGGAAGGAATAACA+CGG | - | chr2_4:59069956-59069975 | None:intergenic | 55.0% | |
| ! | CCGTGTTATTCCTTCCACCC+CGG | + | chr2_4:59069953-59069972 | Msa0338660:CDS | 55.0% |
| ! | CGTGTTATTCCTTCCACCCC+GGG | + | chr2_4:59069954-59069973 | Msa0338660:CDS | 55.0% |
| GACCTGTGATGTGTGCAAGG+AGG | + | chr2_4:59070378-59070397 | Msa0338660:CDS | 55.0% | |
| CTCCTCCTTGCACACATCAC+AGG | - | chr2_4:59070383-59070402 | None:intergenic | 55.0% | |
| CTGTGATGTGTGCAAGGAGG+AGG | + | chr2_4:59070381-59070400 | Msa0338660:CDS | 55.0% | |
| CGTGCCTGAAGTCATCTTCC+TGG | - | chr2_4:59070477-59070496 | None:intergenic | 55.0% | |
| GGAGACTAGACCGAGTACAC+AGG | - | chr2_4:59071345-59071364 | None:intergenic | 55.0% | |
| ! | CGCGCACGTATTTTACCCCT+TGG | + | chr2_4:59071705-59071724 | Msa0338660:CDS | 55.0% |
| CTGCTTGCTTACCAACCTGC+AGG | - | chr2_4:59071834-59071853 | None:intergenic | 55.0% | |
| AGCAAAGAGTCCGGGGTGAG+TGG | + | chr2_4:59068391-59068410 | Msa0338660:five_prime_UTR | 60.0% | |
| GAGTTCGAGCTATCGTCCCC+TGG | - | chr2_4:59069878-59069897 | None:intergenic | 60.0% | |
| TCCTTCCACCCCGGGTGCAA+AGG | + | chr2_4:59069962-59069981 | Msa0338660:CDS | 65.0% | |
| TCCTTTGCACCCGGGGTGGA+AGG | - | chr2_4:59069966-59069985 | None:intergenic | 65.0% | |
| CACTTCCTTTGCACCCGGGG+TGG | - | chr2_4:59069970-59069989 | None:intergenic | 65.0% | |
| TCCTGGAGCAAGGCCTCACC+AGG | + | chr2_4:59070456-59070475 | Msa0338660:CDS | 65.0% | |
| TCCTGGTGAGGCCTTGCTCC+AGG | - | chr2_4:59070460-59070479 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 59068386 | 59072440 | 59068386 | ID=Msa0338660;Name=Msa0338660 |
| chr2_4 | mRNA | 59068386 | 59072440 | 59068386 | ID=Msa0338660-mRNA-1;Parent=Msa0338660;Name=Msa0338660-mRNA-1;_AED=0.12;_eAED=0.12;_QI=267|0.85|0.87|1|1|1|8|342|499 |
| chr2_4 | exon | 59068386 | 59068727 | 59068386 | ID=Msa0338660-mRNA-1:exon:18310;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59068911 | 59069375 | 59068911 | ID=Msa0338660-mRNA-1:exon:18311;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59069870 | 59070026 | 59069870 | ID=Msa0338660-mRNA-1:exon:18312;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59070203 | 59070500 | 59070203 | ID=Msa0338660-mRNA-1:exon:18313;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59071150 | 59071222 | 59071150 | ID=Msa0338660-mRNA-1:exon:18314;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59071296 | 59071386 | 59071296 | ID=Msa0338660-mRNA-1:exon:18315;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59071647 | 59071726 | 59071647 | ID=Msa0338660-mRNA-1:exon:18316;Parent=Msa0338660-mRNA-1 |
| chr2_4 | exon | 59071838 | 59072440 | 59071838 | ID=Msa0338660-mRNA-1:exon:18317;Parent=Msa0338660-mRNA-1 |
| chr2_4 | five_prime_UTR | 59068386 | 59068652 | 59068386 | ID=Msa0338660-mRNA-1:five_prime_utr;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59068653 | 59068727 | 59068653 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59068911 | 59069375 | 59068911 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59069870 | 59070026 | 59069870 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59070203 | 59070500 | 59070203 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59071150 | 59071222 | 59071150 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59071296 | 59071386 | 59071296 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59071647 | 59071726 | 59071647 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | CDS | 59071838 | 59072098 | 59071838 | ID=Msa0338660-mRNA-1:cds;Parent=Msa0338660-mRNA-1 |
| chr2_4 | three_prime_UTR | 59072099 | 59072440 | 59072099 | ID=Msa0338660-mRNA-1:three_prime_utr;Parent=Msa0338660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
